Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus6.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus6.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus6.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus6.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus6.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus6.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus6.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus6.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.report.clus6.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.volcano_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.heatmap_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus4.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus4.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus4.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus4.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus4.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus4.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus4.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus4.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus4.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus4.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus4.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus4.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus4.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus4.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus4.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus4.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus4.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus4.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.NON.clus4.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.NON.clus4.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus4.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus4.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus4.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.NON.clus4.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus4.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus4.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus4.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus4.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus4.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus4.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus4.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus4.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus4.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus4.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus4.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus4.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus4.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.NON.clus4.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus4.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus4.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus4.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus4.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus4.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus4.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus4.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus4.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus4.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus4.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.NON.clus4.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus4.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus4.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.NON.clus4.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus4.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus4.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.NON.clus4.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus4.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus4.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus4.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus4.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus4.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus4.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus4.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus4.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus4.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus4.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus4.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus4.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus4.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus4.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus4.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus4.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus4.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.NON.clus4.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus4.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus4.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.NON.clus4.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus4.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.NON.clus4.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.NON.clus4.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus4.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus4.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus4.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus4.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus4.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus4.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus4.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus4.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus4.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus4.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus4.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus4.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus4.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.NON.clus4.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.NON.clus4.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus4.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.NON.clus4.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus4.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus4.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus4.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.NON.clus4.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus4.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus4.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus4.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.NON.clus4.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus4.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus4.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus4.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus4.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus4.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus4.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus4.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus4.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus4.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus4.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus4.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.heatmap_plot.NON.clus4.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus4.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus4.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus4.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus4.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus4.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus4.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus4.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus4.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.NON.clus4.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.NON.clus4.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus4.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus4.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus4.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus4.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus4.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus4.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus4.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus4.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus4.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus4.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus4.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus4.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus4.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus4.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus4.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus4.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus4.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus4.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus4.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus4.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus4.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus4.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus4.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus4.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus4.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus4.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus4.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus4.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus4.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.NON.clus4.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus4.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus4.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus4.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus4.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus4.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus4.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.NON.clus4.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus4.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus4.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.NON.clus4.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus4.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus4.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus4.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus4.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus4.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.NON.clus4.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus4.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus4.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus4.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus4.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus4.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus4.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus4.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus4.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus4.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.volcano_plot.NON.clus4.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus4.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus4.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.volcano_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.heatmap_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus4.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus4.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus4.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus4.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus4.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus4.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.NON.clus4.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus4.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.NON.clus4.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus4.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus4.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus4.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus4.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus4.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus4.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus4.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus4.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus4.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.NON.clus4.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus4.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.NON.clus4.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.NON.clus4.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus4.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus4.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus4.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus4.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus4.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus4.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus4.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus4.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus4.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.NON.clus4.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus4.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.NON.clus4.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus4.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus4.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus4.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus4.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus4.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.NON.clus4.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus4.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.NON.clus4.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus4.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.NON.clus4.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus4.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.NON.clus4.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus4.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus4.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus4.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus4.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus4.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.volcano_plot.NON.clus4.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus4.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus4.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus4.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus4.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus4.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.NON.clus4.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus4.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus4.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus4.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus4.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.NON.clus4.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus4.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus4.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus4.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus4.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.NON.clus4.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus4.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus4.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus4.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus4.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus4.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus4.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus4.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.NON.clus4.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus4.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus4.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus4.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus4.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus4.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus4.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus4.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.NON.clus4.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus4.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus4.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus4.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus4.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus4.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus4.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus4.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus4.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus4.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus4.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus4.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus4.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus4.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus4.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus4.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus4.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus4.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus4.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus4.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus4.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus4.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus4.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus4.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus4.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus4.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus4.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus4.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus4.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus4.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus4.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus4.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus4.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus4.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus4.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus4.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus4.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.NON.clus4.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus4.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus4.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus4.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus4.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus4.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus4.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus4.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus4.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus4.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus4.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus4.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.NON.clus4.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus4.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.NON.clus4.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus4.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus4.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus4.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus4.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus4.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus4.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus4.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus4.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus4.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus4.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus4.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus4.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus4.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus4.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus4.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus4.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus4.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus4.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.NON.clus4.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.heatmap_plot.NON.clus4.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus4.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus4.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus4.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus4.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus4.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus4.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus4.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus4.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus4.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus4.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus4.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus4.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus4.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus4.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus4.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus4.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus4.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus4.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus4.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus4.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus4.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.NON.clus4.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus4.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.NON.clus4.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus4.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus4.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus4.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus4.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus4.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_exp_FileName	TGCT-TP.uncv2.mRNAseq_RSEM_normalized_log2.txt	gdac.broadinstitute.org_TGCT-TP.mRNAseq_Preprocess.Level_3.2016012800.1.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus6.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus6.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus6.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus6.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus6.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus6.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus6.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus6.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.report.clus6.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.volcano_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.heatmap_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus4.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus4.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus4.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus4.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus4.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus4.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus4.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus4.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus4.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus4.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus4.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus4.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus4.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus4.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus4.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus4.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus4.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus4.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.NON.clus4.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.NON.clus4.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus4.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus4.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus4.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.NON.clus4.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus4.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus4.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus4.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus4.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus4.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus4.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus4.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus4.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus4.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus4.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus4.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus4.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus4.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.NON.clus4.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus4.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus4.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus4.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus4.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus4.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus4.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus4.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus4.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus4.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus4.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.NON.clus4.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus4.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus4.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.NON.clus4.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus4.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus4.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.NON.clus4.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus4.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus4.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus4.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus4.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus4.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus4.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus4.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus4.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus4.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus4.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus4.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus4.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus4.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus4.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus4.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus4.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus4.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.NON.clus4.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus4.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus4.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.NON.clus4.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus4.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.NON.clus4.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.NON.clus4.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus4.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus4.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus4.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus4.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus4.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus4.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus4.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus4.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus4.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus4.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus4.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus4.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus4.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.NON.clus4.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.NON.clus4.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus4.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.NON.clus4.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus4.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus4.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus4.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.NON.clus4.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus4.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus4.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus4.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.NON.clus4.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus4.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus4.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus4.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus4.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus4.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus4.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus4.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus4.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus4.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus4.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus4.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.heatmap_plot.NON.clus4.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus4.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus4.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus4.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus4.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus4.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus4.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus4.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus4.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.NON.clus4.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.NON.clus4.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus4.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus4.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus4.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus4.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus4.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus4.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus4.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus4.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus4.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus4.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus4.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus4.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus4.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus4.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus4.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus4.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus4.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus4.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus4.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus4.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus4.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus4.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus4.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus4.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus4.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus4.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus4.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus4.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus4.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.NON.clus4.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus4.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus4.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus4.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus4.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus4.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus4.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.NON.clus4.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus4.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus4.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.NON.clus4.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus4.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus4.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus4.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus4.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus4.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.NON.clus4.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus4.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus4.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus4.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus4.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus4.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus4.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus4.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus4.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus4.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.volcano_plot.NON.clus4.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus4.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus4.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.volcano_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.heatmap_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus4.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus4.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus4.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus4.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus4.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus4.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.NON.clus4.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus4.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.NON.clus4.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus4.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus4.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus4.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus4.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus4.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus4.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus4.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus4.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus4.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.NON.clus4.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus4.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.NON.clus4.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.NON.clus4.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus4.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus4.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus4.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus4.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus4.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus4.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus4.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus4.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus4.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.NON.clus4.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus4.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.NON.clus4.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus4.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus4.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus4.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus4.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus4.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.NON.clus4.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus4.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.NON.clus4.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus4.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.NON.clus4.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus4.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.NON.clus4.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus4.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus4.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus4.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus4.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus4.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.volcano_plot.NON.clus4.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus4.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus4.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus4.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus4.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus4.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.NON.clus4.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus4.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus4.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus4.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus4.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.NON.clus4.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus4.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus4.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus4.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus4.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.NON.clus4.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus4.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus4.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus4.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus4.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus4.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus4.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus4.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.NON.clus4.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus4.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus4.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus4.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus4.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus4.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus4.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus4.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.NON.clus4.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus4.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus4.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus4.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus4.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus4.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus4.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus4.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus4.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus4.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus4.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus4.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus4.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus4.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus4.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus4.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus4.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus4.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus4.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus4.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus4.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus4.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus4.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus4.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus4.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus4.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus4.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus4.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus4.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus4.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus4.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus4.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus4.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus4.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus4.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus4.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus4.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.NON.clus4.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus4.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus4.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus4.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus4.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus4.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus4.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus4.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus4.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus4.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus4.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus4.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.NON.clus4.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus4.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.NON.clus4.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus4.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus4.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus4.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus4.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus4.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus4.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus4.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus4.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus4.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus4.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus4.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus4.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus4.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus4.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus4.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus4.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus4.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus4.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.NON.clus4.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.heatmap_plot.NON.clus4.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus4.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus4.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus4.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus4.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus4.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus4.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus4.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus4.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus4.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus4.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus4.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus4.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus4.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus4.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus4.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus4.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus4.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus4.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus4.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus4.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus4.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.NON.clus4.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus4.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.NON.clus4.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus4.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus4.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus4.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus4.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus4.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
gs_db	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.report.clus1.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.report.clus1.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.report.clus1.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.report.clus1.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.report.clus1.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.report.clus1.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.report.clus1.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.report.clus1.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.report.clus1.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.report.clus1.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.report.clus1.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.report.clus1.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.report.clus1.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.report.clus1.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.report.clus1.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.report.clus1.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.report.clus1.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.report.clus1.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.report.clus1.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.report.clus1.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.report.clus3.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.report.clus3.29.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.report.clus3.62.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.report.clus3.23.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.report.clus3.65.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.report.clus3.49.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.report.clus3.27.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.report.clus3.21.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.report.clus3.60.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.report.clus3.34.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus3.43.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.report.clus3.59.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.report.clus3.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.report.clus3.69.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.report.clus3.47.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus3.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.report.clus3.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.report.clus3.53.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.report.clus3.37.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.report.clus3.22.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.report.clus3.61.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.report.clus3.63.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus3.32.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.report.clus3.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.report.clus3.36.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.report.clus3.33.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.report.clus3.70.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.report.clus3.64.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.report.clus3.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.report.clus3.51.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.report.clus3.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.report.clus3.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.report.clus3.26.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.report.clus3.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.report.clus3.48.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.report.clus3.24.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.report.clus3.28.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.report.clus3.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.report.clus3.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.report.clus3.56.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.report.clus3.30.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.report.clus3.39.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.report.clus3.50.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.report.clus3.41.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.report.clus3.67.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.report.clus3.58.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.report.clus3.71.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.report.clus3.68.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.report.clus3.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.report.clus3.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.report.clus3.44.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.report.clus3.42.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.report.clus3.46.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.report.clus3.52.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.report.clus3.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.report.clus3.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.report.clus3.55.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.report.clus3.25.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.report.clus3.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.report.clus3.66.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.report.clus3.35.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.report.clus3.38.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.report.clus3.54.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.report.clus3.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.report.clus3.40.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.report.clus3.45.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.report.clus3.31.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.report.clus3.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.report.clus3.57.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.report.clus3.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.report.clus2.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.report.clus2.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.report.clus2.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.report.clus2.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.report.clus2.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.report.clus2.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.report.clus2.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.report.clus2.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.report.clus2.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.report.clus2.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.report.clus2.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.report.clus2.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.report.clus2.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.report.clus2.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.report.clus2.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.report.clus2.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.report.clus2.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.report.clus2.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.report.clus2.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.report.clus2.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.report.clus6.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.report.clus6.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.report.clus6.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.report.clus6.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.report.clus6.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.report.clus6.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.report.clus6.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.report.clus6.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.report.clus6.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.report.clus6.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus6.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.report.clus6.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.report.clus6.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.report.clus6.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.report.clus6.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.report.clus6.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.report.clus6.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.report.clus6.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.report.clus6.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.report.clus6.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.report.clus5.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.report.clus5.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.report.clus5.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.report.clus5.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.report.clus5.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.report.clus5.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.report.clus5.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.report.clus5.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.report.clus5.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.report.clus5.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.report.clus5.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.report.clus5.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.report.clus5.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.report.clus5.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.report.clus5.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.report.clus5.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.report.clus5.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.report.clus5.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.report.clus5.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.report.clus5.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.report.clus4.20.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.report.clus4.14.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.report.clus4.6.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.report.clus4.7.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.report.clus4.18.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.report.clus4.16.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.report.clus4.9.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.report.clus4.15.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.report.clus4.5.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.report.clus4.17.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.report.clus4.4.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.report.clus4.3.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.report.clus4.13.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.report.clus4.12.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.report.clus4.19.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.report.clus4.11.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.report.clus4.10.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.report.clus4.1.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.report.clus4.8.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.report.clus4.2.txt	enriched_pathwayis_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus1.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus3.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus2.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus6.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus5.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SUMMARY.SIG.RESULTS.REPORT.clus4.txt	enriched_pathways_in_each_cluster	Level_4	text	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.NON.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus1.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus1.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.NON.clus1.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus1.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.NON.clus1.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus1.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.NON.clus1.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.NON.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus1.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus1.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.NON.clus1.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus1.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus1.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus1.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus1.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus3.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.NON.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus3.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus3.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.NON.clus3.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus3.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.volcano_plot.clus3.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.NON.clus3.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.NON.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus3.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus3.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus3.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.NON.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus3.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.NON.clus3.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.NON.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.NON.clus3.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus3.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.NON.clus3.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.clus3.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.heatmap_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.volcano_plot.NON.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.NON.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus2.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus2.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.NON.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.NON.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.NON.clus2.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.clus2.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.NON.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.volcano_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.heatmap_plot.NON.clus2.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus2.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.clus2.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.NON.clus2.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.NON.clus2.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus2.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus2.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus2.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.NON.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus2.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.NON.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.volcano_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus6.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.heatmap_plot.clus6.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.volcano_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.heatmap_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.NON.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.heatmap_plot.NON.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.NON.clus5.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus5.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus5.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus5.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.NON.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus5.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.NON.clus5.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus5.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus5.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.volcano_plot.NON.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus5.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus5.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus5.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus5.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus5.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus5.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus5.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus4.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus4.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus4.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus4.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus4.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus4.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus4.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus4.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus4.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus4.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus4.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus4.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus4.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus4.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus4.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus4.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus4.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus4.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.NON.clus4.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.NON.clus4.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus4.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus4.46.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus4.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.NON.clus4.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus4.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus4.70.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus4.109.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus4.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus4.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus4.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus4.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus4.52.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus4.117.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus4.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus4.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus4.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus4.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.NON.clus4.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus4.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus4.29.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus4.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus4.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus4.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus4.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus4.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus4.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus4.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus4.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.NON.clus4.49.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus4.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus4.110.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.NON.clus4.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.91.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus4.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus4.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.NON.clus4.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus4.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus4.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus4.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus4.111.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus4.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus4.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus4.35.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus4.60.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus4.25.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus4.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus4.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus4.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus4.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus4.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus4.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus4.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus4.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.NON.clus4.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus4.105.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus4.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.NON.clus4.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.108.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus4.98.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.NON.clus4.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.NON.clus4.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus4.58.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus4.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus4.66.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus4.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus4.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus4.78.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus4.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus4.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus4.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus4.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus4.14.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus4.53.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus4.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus4.38.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.NON.clus4.41.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.NON.clus4.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus4.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.NON.clus4.27.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus4.50.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus4.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.119.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus4.21.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.NON.clus4.83.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus4.113.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus4.101.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus4.112.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.NON.clus4.114.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus4.37.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus4.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus4.11.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus4.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus4.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus4.31.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus4.51.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus4.57.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus4.106.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus4.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus4.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus4.5.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus4.34.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus4.18.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.2.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.heatmap_plot.NON.clus4.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus4.61.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus4.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus4.81.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus4.64.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.71.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus4.10.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus4.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus4.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus4.23.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus4.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.NON.clus4.85.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.NON.clus4.65.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus4.121.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus4.102.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus4.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus4.55.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus4.120.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus4.47.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus4.73.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus4.90.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus4.19.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus4.100.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus4.7.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus4.103.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus4.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus4.20.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus4.32.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus4.54.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus4.96.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus4.116.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus4.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.43.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus4.94.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus4.92.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus4.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus4.30.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.79.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus4.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus4.28.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus4.48.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus4.63.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus4.42.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus4.87.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus4.86.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus4.93.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus4.107.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.NON.clus4.40.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus4.45.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus4.104.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus4.62.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus4.89.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus4.69.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus4.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.NON.clus4.68.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus4.26.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus4.122.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus4.6.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.NON.clus4.84.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus4.56.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus4.77.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.82.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus4.115.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus4.12.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.67.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.4.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus4.44.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus4.75.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus4.17.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.72.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.NON.clus4.74.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus4.33.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.13.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus4.80.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus4.76.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus4.3.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus4.22.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus4.88.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus4.15.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus4.1.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus4.36.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus4.39.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus4.99.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus4.95.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.volcano_plot.NON.clus4.59.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus4.97.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus4.24.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.118.png	enriched_pathways_in_each_cluster	Level_4	png	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.volcano_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.heatmap_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.volcano_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_2_SIGNALING.heatmap_plot.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.heatmap_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.heatmap_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.volcano_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.volcano_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.volcano_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.heatmap_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.heatmap_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_ERKS.heatmap_plot.NON.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.volcano_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.heatmap_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.volcano_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.heatmap_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_INTEGRIN_PATHWAY.volcano_plot.NON.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.volcano_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.volcano_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.NON.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.volcano_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.volcano_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ALLOGRAFT_REJECTION.heatmap_plot.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_PI3KCIPATHWAY.volcano_plot.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.heatmap_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NGF_SIGNALLING_VIA_TRKA_FROM_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus1.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_CYTOSOLIC_DNA_SENSING_PATHWAY.heatmap_plot.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL8CXCR2_PATHWAY.volcano_plot.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.heatmap_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_ANTIGEN_ACTIVATES_B_CELL_RECEPTOR_LEADING_TO_GENERATION_OF_SECOND_MESSENGERS.volcano_plot.clus1.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.NON.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_AUTOIMMUNE_THYROID_DISEASE.volcano_plot.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.volcano_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.heatmap_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_CD28_CO_STIMULATION.volcano_plot.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY.heatmap_plot.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.heatmap_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_APOPTOTIC_CLEAVAGE_OF_CELLULAR_PROTEINS.volcano_plot.NON.clus1.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_RECEPTOR_SHC_SIGNALING.heatmap_plot.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.NON.clus1.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.volcano_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IFNGPATHWAY.volcano_plot.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.NON.clus1.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus1.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.KEGG_ADHERENS_JUNCTION.heatmap_plot.NON.clus1.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.volcano_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.volcano_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.PID_IL23PATHWAY.heatmap_plot.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_ERK_PATHWAY.heatmap_plot.NON.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.NON.clus1.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALLING_TO_RAS.volcano_plot.NON.clus1.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_RACCYCD_PATHWAY.volcano_plot.NON.clus1.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_RIG_I_MDA5_MEDIATED_INDUCTION_OF_IFN_ALPHA_BETA_PATHWAYS.heatmap_plot.clus1.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.NON.clus1.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.clus1.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.clus1.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_SMAD2_SMAD3_SMAD4_HETEROTRIMER_REGULATES_TRANSCRIPTION.heatmap_plot.NON.clus1.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_COSTIMULATION_BY_THE_CD28_FAMILY.volcano_plot.clus1.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_IL_3_5_AND_GM_CSF_SIGNALING.heatmap_plot.clus1.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.BIOCARTA_G1_PATHWAY.heatmap_plot.NON.clus1.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_TRIGLYCERIDE_BIOSYNTHESIS.heatmap_plot.clus1.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_NEGATIVE_REGULATION_OF_FGFR_SIGNALING.heatmap_plot.NON.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.clus1.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.heatmap_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.volcano_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.heatmap_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.heatmap_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.heatmap_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.heatmap_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.heatmap_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_CITRATE_CYCLE_TCA_CYCLE.volcano_plot.clus3.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ION_TRANSPORT_BY_P_TYPE_ATPASES.volcano_plot.NON.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.volcano_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.clus3.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.heatmap_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.clus3.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_UNFOLDED_PROTEIN_RESPONSE.volcano_plot.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.volcano_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_NON_SMALL_CELL_LUNG_CANCER.heatmap_plot.NON.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.clus3.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.heatmap_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.heatmap_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.heatmap_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.volcano_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.volcano_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.volcano_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.clus3.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.clus3.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PYRUVATE_METABOLISM_AND_CITRIC_ACID_TCA_CYCLE.heatmap_plot.clus3.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.ST_INTERLEUKIN_4_PATHWAY.heatmap_plot.NON.clus3.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.volcano_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.volcano_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.clus3.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.volcano_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_RXR_VDR_PATHWAY.heatmap_plot.NON.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.clus3.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.volcano_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.clus3.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.clus3.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_BCR_SIGNALING_PATHWAY.volcano_plot.NON.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_TYROSINE_METABOLISM.volcano_plot.NON.clus3.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.NON.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.clus3.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.volcano_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_TGF_BETA_RECEPTOR_COMPLEX.heatmap_plot.clus3.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.clus3.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.heatmap_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.clus3.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus3.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.volcano_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.clus3.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.clus3.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.clus3.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus3.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.clus3.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.clus3.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.clus3.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.heatmap_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.clus3.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.volcano_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_ABC_TRANSPORTERS.heatmap_plot.NON.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.heatmap_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RETINOL_METABOLISM.volcano_plot.NON.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.volcano_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_MTOR_SIGNALING_PATHWAY.heatmap_plot.NON.clus3.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.clus3.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_CHEMOTAXIS.heatmap_plot.NON.clus3.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus3.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.clus3.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_MPR_PATHWAY.volcano_plot.clus3.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.clus3.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.clus3.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.clus3.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_HIF2PATHWAY.volcano_plot.clus3.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.clus3.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.clus3.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PHASE1_FUNCTIONALIZATION_OF_COMPOUNDS.heatmap_plot.NON.clus3.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.clus3.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_BIOSYNTHESIS_OF_THE_N_GLYCAN_PRECURSOR_DOLICHOL_LIPID_LINKED_OLIGOSACCHARIDE_LLO_AND_TRANSFER_TO_A_NASCENT_PROTEIN.volcano_plot.clus3.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.clus3.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.clus3.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.clus3.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_PHOSPHATIDYLINOSITOL_SIGNALING_SYSTEM.heatmap_plot.NON.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.clus3.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PERK_REGULATED_GENE_EXPRESSION.volcano_plot.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.clus3.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus3.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.clus3.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.clus3.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.BIOCARTA_RHO_PATHWAY.heatmap_plot.NON.clus3.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_INOSITOL_PHOSPHATE_METABOLISM.volcano_plot.NON.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.clus3.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_VITAMINS_AND_COFACTORS.volcano_plot.clus3.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.clus3.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.SIG_PIP3_SIGNALING_IN_B_LYMPHOCYTES.volcano_plot.NON.clus3.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.clus3.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_ABC_FAMILY_PROTEINS_MEDIATED_TRANSPORT.heatmap_plot.NON.clus3.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.heatmap_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_HUNTINGTONS_DISEASE.volcano_plot.clus3.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SELENOAMINO_ACID_METABOLISM.heatmap_plot.clus3.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.clus3.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.clus3.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.clus3.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.PID_ERBB4_PATHWAY.heatmap_plot.NON.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_PI_METABOLISM.heatmap_plot.NON.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.clus3.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.clus3.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.clus3.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.clus3.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.clus3.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PIPS_AT_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus3.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.clus3.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.clus3.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.clus3.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.REACTOME_APOPTOSIS.volcano_plot.clus3.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.volcano_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.volcano_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.volcano_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.NON.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.volcano_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.heatmap_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.volcano_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.heatmap_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.volcano_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_PDGF.heatmap_plot.NON.clus2.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.NON.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.volcano_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.heatmap_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.heatmap_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_NOTCH_SIGNALING_PATHWAY.heatmap_plot.NON.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.volcano_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.clus2.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.volcano_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.volcano_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.BIOCARTA_PYK2_PATHWAY.heatmap_plot.NON.clus2.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_GENERIC_TRANSCRIPTION_PATHWAY.heatmap_plot.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_RB_1PATHWAY.heatmap_plot.NON.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_DELTANP63PATHWAY.heatmap_plot.NON.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_UPA_UPAR_PATHWAY.volcano_plot.NON.clus2.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.volcano_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.volcano_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.volcano_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_ACTIVATED_NOTCH1_TRANSMITS_SIGNAL_TO_THE_NUCLEUS.heatmap_plot.NON.clus2.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH1.heatmap_plot.NON.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.clus2.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_ANGIOPOIETINRECEPTOR_PATHWAY.volcano_plot.NON.clus2.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HDAC_CLASSIII_PATHWAY.heatmap_plot.NON.clus2.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_P73PATHWAY.heatmap_plot.NON.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_TAP63PATHWAY.volcano_plot.NON.clus2.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.clus2.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.clus2.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_HNF3APATHWAY.heatmap_plot.NON.clus2.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.clus2.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.NON.clus2.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.clus2.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_VEGFR1_PATHWAY.heatmap_plot.NON.clus2.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.clus2.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.REACTOME_PI_3K_CASCADE.volcano_plot.NON.clus2.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.NON.clus2.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.PID_INTEGRIN_A4B1_PATHWAY.heatmap_plot.NON.clus2.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.volcano_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.volcano_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.heatmap_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.volcano_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_VALINE_LEUCINE_AND_ISOLEUCINE_DEGRADATION.volcano_plot.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.volcano_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPID_DIGESTION_MOBILIZATION_AND_TRANSPORT.heatmap_plot.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.volcano_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.heatmap_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.heatmap_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.volcano_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.volcano_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.heatmap_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.volcano_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.volcano_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.volcano_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PPAR_SIGNALING_PATHWAY.heatmap_plot.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_FGFR1_MUTANTS.heatmap_plot.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.heatmap_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TIGHT_JUNCTION_INTERACTIONS.heatmap_plot.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_BASAL_TRANSCRIPTION_FACTORS.heatmap_plot.NON.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.heatmap_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_GLYCOSYLPHOSPHATIDYLINOSITOL_GPI_ANCHOR_BIOSYNTHESIS.volcano_plot.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_OLFACTORY_SIGNALING_PATHWAY.heatmap_plot.NON.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.heatmap_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.heatmap_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus6.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.volcano_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_HNF3BPATHWAY.volcano_plot.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus6.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_LIPOPROTEIN_METABOLISM.volcano_plot.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_ALANINE_ASPARTATE_AND_GLUTAMATE_METABOLISM.volcano_plot.clus6.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PTM_GAMMA_CARBOXYLATION_HYPUSINE_FORMATION_AND_ARYLSULFATASE_ACTIVATION.volcano_plot.clus6.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_PEROXISOME.heatmap_plot.clus6.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus6.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_SYNDECAN_4_PATHWAY.heatmap_plot.clus6.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus6.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus6.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_AMINO_ACIDS_AND_DERIVATIVES.heatmap_plot.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_OOCYTE_MEIOSIS.heatmap_plot.NON.clus6.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus6.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus6.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus6.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.clus6.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FORMATION_OF_FIBRIN_CLOT_CLOTTING_CASCADE.heatmap_plot.clus6.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_FATTY_ACID_TRIACYLGLYCEROL_AND_KETONE_BODY_METABOLISM.volcano_plot.clus6.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.volcano_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_PPARA_ACTIVATES_GENE_EXPRESSION.heatmap_plot.clus6.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_LIPIDS_AND_LIPOPROTEINS.volcano_plot.clus6.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus6.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus6.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.volcano_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.volcano_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.volcano_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.volcano_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_AJDISS_2PATHWAY.heatmap_plot.NON.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.heatmap_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.volcano_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.heatmap_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.volcano_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.heatmap_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.heatmap_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.heatmap_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.heatmap_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.volcano_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PATHOGENIC_ESCHERICHIA_COLI_INFECTION.heatmap_plot.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PORPHYRIN_AND_CHLOROPHYLL_METABOLISM.heatmap_plot.NON.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.volcano_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PROPANOATE_METABOLISM.volcano_plot.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.heatmap_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.volcano_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.heatmap_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.heatmap_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.volcano_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.volcano_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_ADHERENS_JUNCTIONS_INTERACTIONS.volcano_plot.NON.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_PA.heatmap_plot.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ETHER_LIPID_METABOLISM.volcano_plot.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.volcano_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.heatmap_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.volcano_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ASTHMA.heatmap_plot.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PRION_DISEASES.heatmap_plot.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.heatmap_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.heatmap_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLYCOLYSIS_GLUCONEOGENESIS.volcano_plot.clus5.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.heatmap_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.BIOCARTA_NO1_PATHWAY.heatmap_plot.NON.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.heatmap_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_MTOR_4PATHWAY.volcano_plot.NON.clus5.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.NON.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.volcano_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_GLUTATHIONE_METABOLISM.volcano_plot.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_POST_TRANSLATIONAL_MODIFICATION_SYNTHESIS_OF_GPI_ANCHORED_PROTEINS.volcano_plot.NON.clus5.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NETRIN_PATHWAY.volcano_plot.NON.clus5.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_LYSINE_DEGRADATION.heatmap_plot.NON.clus5.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_VASOPRESSIN_REGULATED_WATER_REABSORPTION.volcano_plot.clus5.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.heatmap_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_AMINO_ACID_TRANSPORT_ACROSS_THE_PLASMA_MEMBRANE.heatmap_plot.NON.clus5.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PARKINSONS_DISEASE.volcano_plot.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ECADHERIN_NASCENTAJ_PATHWAY.heatmap_plot.NON.clus5.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_APOPTOSIS.volcano_plot.clus5.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TYPE_II_DIABETES_MELLITUS.heatmap_plot.NON.clus5.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.heatmap_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_PYRUVATE_METABOLISM.heatmap_plot.clus5.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.ST_WNT_BETA_CATENIN_PATHWAY.heatmap_plot.NON.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_TCA_CYCLE_AND_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_ENDOMETRIAL_CANCER.volcano_plot.NON.clus5.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.KEGG_TASTE_TRANSDUCTION.volcano_plot.NON.clus5.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_P53REGULATIONPATHWAY.heatmap_plot.NON.clus5.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.volcano_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_ERBB1_RECEPTOR_PROXIMAL_PATHWAY.volcano_plot.NON.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_INWARDLY_RECTIFYING_K_CHANNELS.volcano_plot.NON.clus5.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.clus5.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.heatmap_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.clus5.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.PID_NCADHERINPATHWAY.volcano_plot.NON.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.clus5.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_REGULATION_OF_BETA_CELL_DEVELOPMENT.volcano_plot.NON.clus5.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.REACTOME_GLYCEROPHOSPHOLIPID_BIOSYNTHESIS.heatmap_plot.clus5.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.volcano_plot.NON.clus4.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.volcano_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.heatmap_plot.NON.clus4.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.volcano_plot.NON.clus4.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.volcano_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.heatmap_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.heatmap_plot.NON.clus4.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.heatmap_plot.NON.clus4.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.heatmap_plot.NON.clus4.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.volcano_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.heatmap_plot.NON.clus4.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.heatmap_plot.NON.clus4.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.volcano_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.heatmap_plot.NON.clus4.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.heatmap_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.heatmap_plot.NON.clus4.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.volcano_plot.NON.clus4.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.volcano_plot.NON.clus4.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_POLYMERASE.heatmap_plot.NON.clus4.60.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.heatmap_plot.NON.clus4.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.volcano_plot.NON.clus4.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.volcano_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.volcano_plot.NON.clus4.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.heatmap_plot.NON.clus4.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.heatmap_plot.NON.clus4.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_ROBO_RECEPTOR.heatmap_plot.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.heatmap_plot.NON.clus4.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.volcano_plot.NON.clus4.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.heatmap_plot.NON.clus4.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.heatmap_plot.NON.clus4.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.volcano_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.volcano_plot.NON.clus4.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.volcano_plot.NON.clus4.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.volcano_plot.NON.clus4.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.heatmap_plot.NON.clus4.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.heatmap_plot.NON.clus4.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.heatmap_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.heatmap_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.heatmap_plot.NON.clus4.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.volcano_plot.NON.clus4.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.volcano_plot.NON.clus4.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.heatmap_plot.NON.clus4.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.volcano_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.volcano_plot.NON.clus4.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ATM_PATHWAY.heatmap_plot.NON.clus4.66.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.heatmap_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.heatmap_plot.NON.clus4.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.heatmap_plot.NON.clus4.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.volcano_plot.NON.clus4.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.volcano_plot.NON.clus4.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.heatmap_plot.NON.clus4.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.heatmap_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.volcano_plot.NON.clus4.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.heatmap_plot.NON.clus4.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.heatmap_plot.NON.clus4.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.heatmap_plot.NON.clus4.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SRP_DEPENDENT_COTRANSLATIONAL_PROTEIN_TARGETING_TO_MEMBRANE.heatmap_plot.NON.clus4.74.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.volcano_plot.NON.clus4.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PEPTIDE_CHAIN_ELONGATION.volcano_plot.NON.clus4.85.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.heatmap_plot.NON.clus4.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.heatmap_plot.NON.clus4.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.heatmap_plot.NON.clus4.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.heatmap_plot.NON.clus4.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SYNTHESIS_OF_DNA.volcano_plot.NON.clus4.24.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCF_BETA_TRCP_MEDIATED_DEGRADATION_OF_EMI1.heatmap_plot.NON.clus4.32.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.volcano_plot.NON.clus4.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_PROTEASOME_PATHWAY.volcano_plot.NON.clus4.107.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.volcano_plot.NON.clus4.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.volcano_plot.NON.clus4.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.volcano_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.volcano_plot.NON.clus4.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION_PRE_INITIATION_AND_PROMOTER_OPENING.heatmap_plot.NON.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION_COUPLED_NER_TC_NER.volcano_plot.NON.clus4.44.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.volcano_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_TRANSCRIPT_TO_CYTOPLASM.volcano_plot.NON.clus4.58.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.heatmap_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT.heatmap_plot.NON.clus4.116.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.heatmap_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.volcano_plot.NON.clus4.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NONSENSE_MEDIATED_DECAY_ENHANCED_BY_THE_EXON_JUNCTION_COMPLEX.volcano_plot.NON.clus4.40.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.heatmap_plot.NON.clus4.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.heatmap_plot.NON.clus4.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.volcano_plot.NON.clus4.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.heatmap_plot.NON.clus4.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.volcano_plot.NON.clus4.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION_INITIATION_FROM_TYPE_3_PROMOTER.volcano_plot.NON.clus4.82.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.volcano_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DOWNSTREAM_SIGNALING_EVENTS_OF_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.91.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.volcano_plot.NON.clus4.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.volcano_plot.NON.clus4.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ORC1_REMOVAL_FROM_CHROMATIN.heatmap_plot.NON.clus4.48.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.volcano_plot.NON.clus4.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_TERNARY_COMPLEX_AND_SUBSEQUENTLY_THE_43S_COMPLEX.heatmap_plot.NON.clus4.84.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.volcano_plot.NON.clus4.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.heatmap_plot.NON.clus4.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.heatmap_plot.NON.clus4.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.heatmap_plot.NON.clus4.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.heatmap_plot.NON.clus4.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.volcano_plot.NON.clus4.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.volcano_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.heatmap_plot.NON.clus4.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.heatmap_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.volcano_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_3_UTR_MEDIATED_TRANSLATIONAL_REGULATION.heatmap_plot.NON.clus4.49.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.heatmap_plot.NON.clus4.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.heatmap_plot.NON.clus4.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROTEIN_FOLDING.heatmap_plot.NON.clus4.71.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_GLOBAL_GENOMIC_NER_GG_NER.volcano_plot.NON.clus4.115.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_PS1PATHWAY.volcano_plot.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.volcano_plot.NON.clus4.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.volcano_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_ORNITHINE_DECARBOXYLASE_ODC.heatmap_plot.NON.clus4.38.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.heatmap_plot.NON.clus4.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HOST_INTERACTIONS_OF_HIV_FACTORS.heatmap_plot.NON.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.volcano_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SPLICEOSOME.volcano_plot.NON.clus4.33.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.heatmap_plot.NON.clus4.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.heatmap_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.volcano_plot.NON.clus4.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DESTABILIZATION_OF_MRNA_BY_AUF1_HNRNP_D0.heatmap_plot.NON.clus4.57.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.heatmap_plot.NON.clus4.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.heatmap_plot.NON.clus4.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.volcano_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.heatmap_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEPOSITION_OF_NEW_CENPA_CONTAINING_NUCLEOSOMES_AT_THE_CENTROMERE.volcano_plot.NON.clus4.93.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.volcano_plot.NON.clus4.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.volcano_plot.NON.clus4.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_NOTCH_PATHWAY.heatmap_plot.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.heatmap_plot.NON.clus4.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_EXPRESSION_AND_PROCESSING.volcano_plot.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ANTIVIRAL_MECHANISM_BY_IFN_STIMULATED_GENES.volcano_plot.NON.clus4.77.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.heatmap_plot.NON.clus4.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.heatmap_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.volcano_plot.NON.clus4.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.volcano_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.heatmap_plot.NON.clus4.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_P75NTRPATHWAY.heatmap_plot.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.volcano_plot.NON.clus4.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRNA_AMINOACYLATION.heatmap_plot.NON.clus4.30.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_STRAND_ELONGATION.volcano_plot.NON.clus4.81.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_PROMETAPHASE.heatmap_plot.NON.clus4.35.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_PROCESSING.volcano_plot.NON.clus4.53.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_INDEPENDENT_G1_S_DNA_DAMAGE_CHECKPOINT.heatmap_plot.NON.clus4.28.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.volcano_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.volcano_plot.NON.clus4.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.volcano_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.volcano_plot.NON.clus4.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SCFSKP2_MEDIATED_DEGRADATION_OF_P27_P21.volcano_plot.NON.clus4.94.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_PROMOTER_OPENING.heatmap_plot.NON.clus4.104.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.volcano_plot.NON.clus4.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.heatmap_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.volcano_plot.NON.clus4.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_SYSTEMIC_LUPUS_ERYTHEMATOSUS.heatmap_plot.NON.clus4.122.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_VIF_MEDIATED_DEGRADATION_OF_APOBEC3G.heatmap_plot.NON.clus4.76.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.volcano_plot.NON.clus4.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_NF_KAPPAB_IN_B_CELLS.volcano_plot.NON.clus4.16.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.heatmap_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_LATE_PHASE_OF_HIV_LIFE_CYCLE.volcano_plot.NON.clus4.3.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_EXTENSION_OF_TELOMERES.heatmap_plot.NON.clus4.61.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ER_PHAGOSOME_PATHWAY.volcano_plot.NON.clus4.52.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_THE_HIV1_EARLY_ELONGATION_COMPLEX.volcano_plot.NON.clus4.63.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.heatmap_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.heatmap_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RNA_DEGRADATION.heatmap_plot.NON.clus4.23.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_3_END_PROCESSING.heatmap_plot.NON.clus4.112.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ELONGATION_ARREST_AND_RECOVERY.heatmap_plot.NON.clus4.34.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_CAPPING.volcano_plot.NON.clus4.102.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.volcano_plot.NON.clus4.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_DNA_REPLICATION.volcano_plot.NON.clus4.29.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.heatmap_plot.NON.clus4.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_THE_B_CELL_RECEPTOR_BCR.volcano_plot.NON.clus4.79.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING.volcano_plot.NON.clus4.97.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G1_S_TRANSITION.heatmap_plot.NON.clus4.43.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.volcano_plot.NON.clus4.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.heatmap_plot.NON.clus4.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_INFECTION.volcano_plot.NON.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.volcano_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_RIBOSOME.volcano_plot.NON.clus4.83.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_NOTCH.heatmap_plot.clus4.4.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.volcano_plot.NON.clus4.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.volcano_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_RNA.heatmap_plot.NON.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PREFOLDIN_MEDIATED_TRANSFER_OF_SUBSTRATE_TO_CCT_TRIC.heatmap_plot.NON.clus4.98.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_MYC_ACTIVPATHWAY.heatmap_plot.NON.clus4.118.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.volcano_plot.NON.clus4.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_BARD1PATHWAY.heatmap_plot.NON.clus4.101.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_G1_G1_S_PHASES.volcano_plot.NON.clus4.108.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_ANTIGEN_PROCESSING_AND_PRESENTATION.heatmap_plot.NON.clus4.110.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.volcano_plot.NON.clus4.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_S_PHASE.volcano_plot.NON.clus4.55.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PRIMARY_IMMUNODEFICIENCY.volcano_plot.NON.clus4.109.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MRNA_STABILITY_BY_PROTEINS_THAT_BIND_AU_RICH_ELEMENTS.volcano_plot.NON.clus4.78.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_TRANSCRIPTION.heatmap_plot.NON.clus4.6.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_PROTEASOME.volcano_plot.NON.clus4.51.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AGR_PATHWAY.heatmap_plot.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TELOMERE_MAINTENANCE.heatmap_plot.NON.clus4.92.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_MRNA.volcano_plot.NON.clus4.27.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.SIG_REGULATION_OF_THE_ACTIN_CYTOSKELETON_BY_RHO_GTPASES.heatmap_plot.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_HEDGEHOG_GLIPATHWAY.heatmap_plot.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CLEAVAGE_OF_GROWING_TRANSCRIPT_IN_THE_TERMINATION_REGION_.heatmap_plot.NON.clus4.89.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.heatmap_plot.NON.clus4.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_VIRAL_RNA_TRANSCRIPTION_AND_REPLICATION.volcano_plot.NON.clus4.68.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_TRANSCRIPTION.volcano_plot.NON.clus4.86.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEVELOPMENTAL_BIOLOGY.heatmap_plot.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_AMINOACYL_TRNA_BIOSYNTHESIS.heatmap_plot.NON.clus4.26.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_SIGNALING_BY_WNT.heatmap_plot.NON.clus4.17.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_ENDOTHELINPATHWAY.volcano_plot.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DEADENYLATION_DEPENDENT_MRNA_DECAY.volcano_plot.NON.clus4.46.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.heatmap_plot.NON.clus4.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.volcano_plot.NON.clus4.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_TRANSCRIPTION_COUPLED_NER_TC_NER_REPAIR_COMPLEX.heatmap_plot.NON.clus4.106.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NEUROTROPHIN_SIGNALING_PATHWAY.volcano_plot.clus4.9.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDK_MEDIATED_PHOSPHORYLATION_AND_REMOVAL_OF_CDC6.volcano_plot.NON.clus4.45.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_HIV_LIFE_CYCLE.heatmap_plot.NON.clus4.2.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPLICATION.volcano_plot.NON.clus4.12.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOSIS.volcano_plot.NON.clus4.73.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOCHONDRIAL_PROTEIN_IMPORT.heatmap_plot.NON.clus4.90.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_MATURE_MRNA_DERIVED_FROM_AN_INTRONLESS_TRANSCRIPT.heatmap_plot.NON.clus4.70.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.global.plots.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_G2_M_CHECKPOINTS.heatmap_plot.NON.clus4.62.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_COLLAGEN_FORMATION.volcano_plot.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INFLUENZA_LIFE_CYCLE.heatmap_plot.NON.clus4.25.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PACKAGING_OF_TELOMERE_ENDS.heatmap_plot.NON.clus4.105.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.volcano_plot.NON.clus4.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PROCESSING_OF_CAPPED_INTRON_CONTAINING_PRE_MRNA.volcano_plot.NON.clus4.54.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_RECOMBINATION.volcano_plot.NON.clus4.88.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_LONG_TERM_POTENTIATION.heatmap_plot.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AXON_GUIDANCE.heatmap_plot.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CROSS_PRESENTATION_OF_SOLUBLE_EXOGENOUS_ANTIGENS_ENDOSOMES.volcano_plot.NON.clus4.113.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_PRE_NOTCH_TRANSCRIPTION_AND_TRANSLATION.heatmap_plot.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_FORMATION_OF_RNA_POL_II_ELONGATION_COMPLEX_.volcano_plot.NON.clus4.21.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_AURORA_A_PATHWAY.heatmap_plot.NON.clus4.119.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_IL27PATHWAY.volcano_plot.NON.clus4.114.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.volcano_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_CYSTEINE_AND_METHIONINE_METABOLISM.heatmap_plot.NON.clus4.59.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE.heatmap_plot.NON.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.72.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_DNA_REPAIR.heatmap_plot.NON.clus4.20.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MEIOTIC_SYNAPSIS.volcano_plot.NON.clus4.87.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_MITOTIC.volcano_plot.NON.clus4.47.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_III_TRANSCRIPTION.heatmap_plot.NON.clus4.120.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_LIS1PATHWAY.volcano_plot.clus4.13.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_CDH1_BY_CDH1_APC_C.heatmap_plot.NON.clus4.37.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MITOTIC_M_M_G1_PHASES.volcano_plot.NON.clus4.10.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSPORT_OF_RIBONUCLEOPROTEINS_INTO_THE_HOST_NUCLEUS.volcano_plot.NON.clus4.75.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_METABOLISM_OF_NON_CODING_RNA.volcano_plot.NON.clus4.36.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_BASE_EXCISION_REPAIR.heatmap_plot.NON.clus4.56.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CYCLIN_E_ASSOCIATED_EVENTS_DURING_G1_S_TRANSITION_.volcano_plot.NON.clus4.100.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSCRIPTION.volcano_plot.NON.clus4.39.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_MRNA_SPLICING_MINOR_PATHWAY.volcano_plot.NON.clus4.99.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.heatmap_plot.NON.clus4.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_REGULATION_OF_MITOTIC_CELL_CYCLE.volcano_plot.NON.clus4.15.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.volcano_plot.NON.clus4.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.volcano_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ASSEMBLY_OF_THE_PRE_REPLICATIVE_COMPLEX.volcano_plot.NON.clus4.22.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDH1_MEDIATED_DEGRADATION_OF_CDC20_AND_OTHER_APC_C_CDH1_TARGETED_PROTEINS_IN_LATE_MITOSIS_EARLY_G1.heatmap_plot.NON.clus4.19.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CDT1_ASSOCIATION_WITH_THE_CDC6_ORC_ORIGIN_COMPLEX.heatmap_plot.NON.clus4.31.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_II_PRE_TRANSCRIPTION_EVENTS.heatmap_plot.NON.clus4.5.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.volcano_plot.NON.clus4.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_P53_DEPENDENT_G1_DNA_DAMAGE_RESPONSE.heatmap_plot.NON.clus4.50.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RESPIRATORY_ELECTRON_TRANSPORT_ATP_SYNTHESIS_BY_CHEMIOSMOTIC_COUPLING_AND_HEAT_PRODUCTION_BY_UNCOUPLING_PROTEINS_.heatmap_plot.NON.clus4.111.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.ST_T_CELL_SIGNAL_TRANSDUCTION.heatmap_plot.NON.clus4.117.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_NUCLEOTIDE_EXCISION_REPAIR.volcano_plot.NON.clus4.67.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.PID_EPHBFWDPATHWAY.volcano_plot.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_APC_C_CDC20_MEDIATED_DEGRADATION_OF_MITOTIC_PROTEINS.volcano_plot.NON.clus4.18.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_ATR_IN_RESPONSE_TO_REPLICATION_STRESS.heatmap_plot.NON.clus4.69.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CHROMOSOME_MAINTENANCE.volcano_plot.NON.clus4.64.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.heatmap_plot.NON.clus4.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_TRANSLATION.heatmap_plot.NON.clus4.41.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NCAM_SIGNALING_FOR_NEURITE_OUT_GROWTH.volcano_plot.clus4.7.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_THE_ROLE_OF_NEF_IN_HIV1_REPLICATION_AND_DISEASE_PATHOGENESIS.heatmap_plot.NON.clus4.96.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_ACTIVATION_OF_THE_MRNA_UPON_BINDING_OF_THE_CAP_BINDING_COMPLEX_AND_EIFS_AND_SUBSEQUENT_BINDING_TO_43S.volcano_plot.NON.clus4.65.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_AUTODEGRADATION_OF_THE_E3_UBIQUITIN_LIGASE_COP1.volcano_plot.NON.clus4.42.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_OXIDATIVE_PHOSPHORYLATION.heatmap_plot.NON.clus4.121.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.BIOCARTA_AT1R_PATHWAY.heatmap_plot.clus4.1.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.KEGG_HOMOLOGOUS_RECOMBINATION.volcano_plot.NON.clus4.11.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_M_G1_TRANSITION.heatmap_plot.NON.clus4.8.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_NEP_NS2_INTERACTS_WITH_THE_CELLULAR_EXPORT_MACHINERY.volcano_plot.NON.clus4.80.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_CELL_CYCLE_CHECKPOINTS.volcano_plot.NON.clus4.14.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_INTERACTIONS_OF_VPR_WITH_HOST_CELLULAR_PROTEINS.volcano_plot.NON.clus4.103.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.REACTOME_RNA_POL_I_RNA_POL_III_AND_MITOCHONDRIAL_TRANSCRIPTION.heatmap_plot.NON.clus4.95.pdf	enriched_pathways_in_each_cluster	Level_4	pdf	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.high.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.low.exp.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.up.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.down.regulated.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus1___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus3___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus2___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus6___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus5___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	TGCT-TP-mRNAseq_cNMF-clus4___Class2-CanonicalPathway.significant.genes.txt	enriched_pathways_in_each_cluster	Level_4	txt	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
tcga_pheno_FileName	TGCT-TP.mergedcluster.txt	gdac.broadinstitute.org_TGCT-TP.Aggregate_Molecular_Subtype_Clusters.Level_4.2016012800.0.0	urn:lsid:broadinstitute.org:cancer.genome.analysis:10954:39	Pathway_GSEA_mRNAseq_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_TGCT-TP.Pathway_GSEA_mRNAseq.Level_4.2016012800.0.0	yes
