Pipeline Input Name	Archive Result File REF	Comment [TCGA Archive Name]	Protocol REF	Data Transformation Name	Derived Data File	Comment [TCGA Data Type]	Comment [TCGA Data Level]	Comment [TCGA File Type]	Comment [TCGA Archive Name]	Comment [TCGA Include for Analysis]
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_THROMBOXANE_SIGNALLING_THROUGH_TP_RECEPTOR.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_SIGNAL_AMPLIFICATION.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	KEGG_CALCIUM_SIGNALING_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_ADP_SIGNALLING_THROUGH_P2RY1.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_S1P_S1P3_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	KEGG_LONG_TERM_DEPRESSION.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	ST_ADRENERGIC.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_ENDOTHELINPATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_LYSOPHOSPHOLIPID_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_ACETYLCHOLINE.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_THROMBIN_PAR4_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_S1P_META_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_ER_NONGENOMIC_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_ARF6_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_TXA2PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_THROMBIN_PAR1_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_S1P_S1P2_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	basic_data_info.txt	enriched_pathway_genset_info	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	MutSig2CV.input.genenames.txt	enriched_pathway_hypergeometricTest_input	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	MutSig2CV.input.genenames.txt	enriched_pathway_hypergeometricTest_input	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	heatmap.png	enriched_pathways_hypergeometricTest_result	Level_4	png	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	heatmap.pdf	enriched_pathways_hypergeometricTest	Level_4	pdf	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
MSigDB_C2_pathways	c2.cp.v4.0.symbols.gmt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	nozzle.RData	report	Level_4	RData	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_THROMBOXANE_SIGNALLING_THROUGH_TP_RECEPTOR.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_SIGNAL_AMPLIFICATION.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_THROMBIN_SIGNALLING_THROUGH_PROTEINASE_ACTIVATED_RECEPTORS_PARS.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	KEGG_CALCIUM_SIGNALING_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_ADP_SIGNALLING_THROUGH_P2RY1.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_S1P_S1P3_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_G_ALPHA_Q_SIGNALLING_EVENTS.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	KEGG_LONG_TERM_DEPRESSION.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	ST_ADRENERGIC.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_ENDOTHELINPATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_LYSOPHOSPHOLIPID_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_REGULATION_OF_INSULIN_SECRETION_BY_ACETYLCHOLINE.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	REACTOME_GASTRIN_CREB_SIGNALLING_PATHWAY_VIA_PKC_AND_MAPK.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_THROMBIN_PAR4_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_S1P_META_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_ER_NONGENOMIC_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_ARF6_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_TXA2PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_THROMBIN_PAR1_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	PID_S1P_S1P2_PATHWAY.genes.list.txt	enriched_pathway_gene_list	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	basic_data_info.txt	enriched_pathway_genset_info	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	MutSig2CV.input.genenames.txt	enriched_pathway_hypergeometricTest_input	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	MutSig2CV.input.genenames.txt	enriched_pathway_hypergeometricTest_input	Level_4	text	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	heatmap.png	enriched_pathways_hypergeometricTest_result	Level_4	png	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	heatmap.pdf	enriched_pathways_hypergeometricTest	Level_4	pdf	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
GDAC_Pathway_Overlaps_HypergeometricTest:input.genenames.file	sig_genes.txt	N/A	urn:lsid:broadinstitute.org:cancer.genome.analysis:11009:19	Pathway_Overlaps_MSigDB_MutSig2CV_2016012800	nozzle.html	report	Level_4	html	gdac.broadinstitute.org_UVM-TP.Pathway_Overlaps_MSigDB_MutSig2CV.Level_4.2016012800.0.0	yes
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