PARADIGM pathway analysis of mRNA expression and copy number data
Glioblastoma Multiforme (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNA expression and copy number data. Broad Institute of MIT and Harvard. doi:10.7908/C1H994KH
- Overview
+ Introduction
- Summary

There were 31 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Glypican 2 network 211
Calcineurin-regulated NFAT-dependent transcription in lymphocytes 92
Endothelins 76
LPA receptor mediated events 76
amb2 Integrin signaling 68
Ceramide signaling pathway 68
HIF-1-alpha transcription factor network 67
TCGA08_retinoblastoma 65
BARD1 signaling events 62
HIF-2-alpha transcription factor network 58
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data