PARADIGM pathway analysis of mRNA expression data
Kidney Renal Papillary Cell Carcinoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNA expression data. Broad Institute of MIT and Harvard. doi:10.7908/C14M93ZQ
- Overview
+ Introduction
- Summary

There were 39 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Fc-epsilon receptor I signaling in mast cells 3
E-cadherin signaling events 3
IL12-mediated signaling events 2
Syndecan-1-mediated signaling events 2
HIF-1-alpha transcription factor network 2
Glypican 1 network 2
Endothelins 2
Calcineurin-regulated NFAT-dependent transcription in lymphocytes 2
IL23-mediated signaling events 2
Caspase cascade in apoptosis 1
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data