PARADIGM pathway analysis of mRNASeq expression data
Brain Lower Grade Glioma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C1KD1XBH
- Overview
+ Introduction
- Summary

There were 69 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Ephrin A reverse signaling 132
IL23-mediated signaling events 128
FOXM1 transcription factor network 104
TCGA08_retinoblastoma 95
IL12-mediated signaling events 94
Aurora B signaling 86
Effects of Botulinum toxin 78
E-cadherin signaling events 78
Calcineurin-regulated NFAT-dependent transcription in lymphocytes 74
TCR signaling in naïve CD8+ T cells 68
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data