PARADIGM pathway analysis of mRNA expression and copy number data
Brain Lower Grade Glioma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNA expression and copy number data. Broad Institute of MIT and Harvard. doi:10.7908/C1668CMN
- Overview
+ Introduction
- Summary

There were 31 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
FOXM1 transcription factor network 6
E-cadherin signaling events 6
Ephrin A reverse signaling 5
Thromboxane A2 receptor signaling 4
Endothelins 4
Calcineurin-regulated NFAT-dependent transcription in lymphocytes 4
Stabilization and expansion of the E-cadherin adherens junction 4
TCGA08_retinoblastoma 4
IL23-mediated signaling events 4
IL12-mediated signaling events 3
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data