PARADIGM pathway analysis of mRNASeq expression data
Lung Squamous Cell Carcinoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C1W37VR1
- Overview
+ Introduction
- Summary

There were 36 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Signaling events mediated by the Hedgehog family 165
Angiopoietin receptor Tie2-mediated signaling 158
Aurora B signaling 139
FOXM1 transcription factor network 129
Endothelins 81
TCGA08_p53 67
TCGA08_retinoblastoma 64
Glypican 2 network 61
amb2 Integrin signaling 60
Thromboxane A2 receptor signaling 58
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data