PARADIGM pathway analysis of mRNA expression data
Lung Squamous Cell Carcinoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNA expression data. Broad Institute of MIT and Harvard. doi:10.7908/C1MK6CBT
- Overview
+ Introduction
- Summary

There were 65 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
TCGA08_retinoblastoma 53
HIF-1-alpha transcription factor network 31
IL23-mediated signaling events 28
Wnt signaling 26
IL4-mediated signaling events 22
TCGA08_p53 22
Noncanonical Wnt signaling pathway 21
Osteopontin-mediated events 19
Nectin adhesion pathway 19
Glucocorticoid receptor regulatory network 19
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data