PARADIGM pathway analysis of mRNASeq expression data
Mesothelioma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C1MG7NZJ
- Overview
+ Introduction
- Summary

There were 50 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Ephrin A reverse signaling 22
Nephrin/Neph1 signaling in the kidney podocyte 19
TCGA08_retinoblastoma 18
Signaling events mediated by the Hedgehog family 14
Syndecan-1-mediated signaling events 13
IL4-mediated signaling events 13
E-cadherin signaling events 11
p75(NTR)-mediated signaling 10
Glucocorticoid receptor regulatory network 10
Signaling events regulated by Ret tyrosine kinase 10
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data