PARADIGM pathway analysis of mRNASeq expression and copy number data
Ovarian Serous Cystadenocarcinoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression and copy number data. Broad Institute of MIT and Harvard. doi:10.7908/C12B8XGM
- Overview
+ Introduction
- Summary

There were 32 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
TCGA08_retinoblastoma 45
Syndecan-1-mediated signaling events 42
IL4-mediated signaling events 37
TCR signaling in naïve CD8+ T cells 35
IL23-mediated signaling events 34
Signaling events regulated by Ret tyrosine kinase 33
HIF-1-alpha transcription factor network 30
Endothelins 29
Ephrin B reverse signaling 28
Noncanonical Wnt signaling pathway 27
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data