PARADIGM pathway analysis of mRNASeq expression data
Prostate Adenocarcinoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C11R6PZ2
- Overview
+ Introduction
- Summary

There were 56 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Ephrin A reverse signaling 117
Glypican 2 network 108
FOXM1 transcription factor network 91
Angiopoietin receptor Tie2-mediated signaling 88
Aurora B signaling 81
Signaling mediated by p38-alpha and p38-beta 67
Endothelins 64
Syndecan-1-mediated signaling events 60
IL23-mediated signaling events 60
IL4-mediated signaling events 58
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data