PARADIGM pathway analysis of mRNA expression data
Rectum Adenocarcinoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNA expression data. Broad Institute of MIT and Harvard. doi:10.7908/C1GM86R0
- Overview
+ Introduction
- Summary

There were 31 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
BCR signaling pathway 23
Signaling events mediated by Stem cell factor receptor (c-Kit) 18
Glypican 1 network 17
FOXM1 transcription factor network 15
Calcineurin-regulated NFAT-dependent transcription in lymphocytes 14
Fc-epsilon receptor I signaling in mast cells 13
FAS signaling pathway (CD95) 13
Arf6 signaling events 12
Syndecan-1-mediated signaling events 8
IL4-mediated signaling events 8
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data