PARADIGM pathway analysis of mRNASeq expression data
Thymoma (Primary solid tumor)
28 January 2016  |  analyses__2016_01_28
Maintainer Information
Citation Information
Maintained by TCGA GDAC Team (Broad Institute/MD Anderson Cancer Center/Harvard Medical School)
Cite as Broad Institute TCGA Genome Data Analysis Center (2016): PARADIGM pathway analysis of mRNASeq expression data. Broad Institute of MIT and Harvard. doi:10.7908/C18K78K0
- Overview
+ Introduction
- Summary

There were 46 significant pathways identified in this analysis.

Table 1.  Get Full Table Top 10 out of 131 pathways in order of significance.

Pathway.Name Avg.Num.Perturbations
Angiopoietin receptor Tie2-mediated signaling 36
Class IB PI3K non-lipid kinase events 34
Signaling mediated by p38-alpha and p38-beta 33
Nongenotropic Androgen signaling 31
Nephrin/Neph1 signaling in the kidney podocyte 28
PDGFR-alpha signaling pathway 28
IL4-mediated signaling events 25
Endothelins 23
Calcium signaling in the CD4+ TCR pathway 22
IL6-mediated signaling events 22
- Results
+ Summary Table
+ Inferred Pathway Levels Matrix
+ Methods & Data