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/xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A2LD-01A-12R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A2LD-01A-12R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A2LD-01A-12R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A2LD-01A-12R-A20F-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.199.2002.0/TCGA-BT-A2LD-01A-12D-A20B-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-BT-A2LD-01A-12D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-BT-A2LD-01A-12D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-BT-A2LD-01A-12D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-BT-A2LD-01A-12D-A20B-01.seg.txt TCGA-BT-A2LD-01 BLCA-BT-A3PH-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.223.7.0/TCGA-BT-A3PH.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.223.7.0/TCGA-BT-A3PH.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-BT-A3PH-01A-11D-A221-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.11.7.0/TCGA-BT-A3PH-01A-11D-A223-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BT-A3PH-01A-11R-A222-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BT-A3PH-01A-11R-A222-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PH-01A-11R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PH-01A-11R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PH-01A-11R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PH-01A-11R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PH-01A-11R-A220-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.223.2004.0/TCGA-BT-A3PH-01A-11D-A21Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PH-01A-11D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PH-01A-11D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PH-01A-11D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PH-01A-11D-A21Y-01.seg.txt TCGA-BT-A3PH-01 BLCA-BT-A3PJ-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.223.7.0/TCGA-BT-A3PJ.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-BT-A3PJ-01A-21D-A221-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.11.7.0/TCGA-BT-A3PJ-01A-21D-A223-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BT-A3PJ-01A-21R-A222-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BT-A3PJ-01A-21R-A222-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PJ-01A-21R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PJ-01A-21R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PJ-01A-21R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PJ-01A-21R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PJ-01A-21R-A220-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.223.2004.0/TCGA-BT-A3PJ-01A-21D-A21Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PJ-01A-21D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PJ-01A-21D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PJ-01A-21D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PJ-01A-21D-A21Y-01.seg.txt TCGA-BT-A3PJ-01 BLCA-BT-A3PK-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.223.7.0/TCGA-BT-A3PK.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-BT-A3PK-01A-21D-A221-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.11.7.0/TCGA-BT-A3PK-01A-21D-A223-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BT-A3PK-01A-21R-A222-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BT-A3PK-01A-21R-A222-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PK-01A-21R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PK-01A-21R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PK-01A-21R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PK-01A-21R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-BT-A3PK-01A-21R-A220-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.223.2004.0/TCGA-BT-A3PK-01A-21D-A21Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PK-01A-21D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PK-01A-21D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PK-01A-21D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-BT-A3PK-01A-21D-A21Y-01.seg.txt TCGA-BT-A3PK-01 BLCA-BT-A42B-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-BT-A42B.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.12.7.0/TCGA-BT-A42B-01A-32D-A23O-05.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.249.2005.0/TCGA-BT-A42B-01A-32D-A23L-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-BT-A42B-01A-32D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-BT-A42B-01A-32D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-BT-A42B-01A-32D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-BT-A42B-01A-32D-A23L-01.seg.txt TCGA-BT-A42B-01 BLCA-BT-A42C-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-BT-A42C.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.12.7.0/TCGA-BT-A42C-01A-11D-A23O-05.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.249.2005.0/TCGA-BT-A42C-01A-11D-A23L-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-BT-A42C-01A-11D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-BT-A42C-01A-11D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-BT-A42C-01A-11D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-BT-A42C-01A-11D-A23L-01.seg.txt TCGA-BT-A42C-01 BLCA-BT-A42E-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-BT-A42E.clin.txt TP TCGA-BT-A42E BLCA-BT-A42F-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-BT-A42F.clin.txt TP TCGA-BT-A42F BLCA-C4-A0EZ-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.86.23.0/TCGA-C4-A0EZ.clin.txt 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/xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-CF-A3MF-01A-12R-A21E-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MF-01A-12R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MF-01A-12R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MF-01A-12R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MF-01A-12R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MF-01A-12R-A21D-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.207.2002.0/TCGA-CF-A3MF-01A-12D-A219-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-CF-A3MF-01A-12D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-CF-A3MF-01A-12D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-CF-A3MF-01A-12D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-CF-A3MF-01A-12D-A219-01.seg.txt TCGA-CF-A3MF-01 BLCA-CF-A3MG-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.199.15.0/TCGA-CF-A3MG.clin.txt 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/xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-CF-A3MG-01A-11R-A20E-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MG-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MG-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MG-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MG-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MG-01A-11R-A20F-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.199.2002.0/TCGA-CF-A3MG-01A-11D-A20B-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MG-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MG-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MG-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MG-01A-11D-A20B-01.seg.txt TCGA-CF-A3MG-01 BLCA-CF-A3MH-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.199.15.0/TCGA-CF-A3MH.clin.txt 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/xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-CF-A3MH-01A-11R-A20E-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MH-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MH-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MH-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MH-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MH-01A-11R-A20F-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.199.2002.0/TCGA-CF-A3MH-01A-11D-A20B-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MH-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MH-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MH-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MH-01A-11D-A20B-01.seg.txt TCGA-CF-A3MH-01 BLCA-CF-A3MI-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.199.15.0/TCGA-CF-A3MI.clin.txt 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/xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MI-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MI-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MI-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MI-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-CF-A3MI-01A-11R-A20F-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.199.2002.0/TCGA-CF-A3MI-01A-11D-A20B-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MI-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-CF-A3MI-01A-11D-A20B-01.seg.txt 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/xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-CF-A47V.clin.txt TP TCGA-CF-A47V BLCA-CF-A47W-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-CF-A47W.clin.txt TP TCGA-CF-A47W BLCA-CF-A47X-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-CF-A47X.clin.txt TP TCGA-CF-A47X BLCA-CF-A47Y-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-CF-A47Y.clin.txt TP TCGA-CF-A47Y BLCA-CU-A0YN-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.86.23.0/TCGA-CU-A0YN.clin.txt 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/xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.207.2002.0/TCGA-DK-A3IK-01A-32D-A219-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IK-01A-32D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IK-01A-32D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IK-01A-32D-A219-01.seg.txt 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/xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.199.2002.0/TCGA-DK-A3IL-01A-11D-A20B-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-DK-A3IL-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-DK-A3IL-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-DK-A3IL-01A-11D-A20B-01.seg.txt 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/xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-DK-A3IS-01A-21R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-DK-A3IS-01A-21R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-DK-A3IS-01A-21R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-DK-A3IS-01A-21R-A21D-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.207.2002.0/TCGA-DK-A3IS-01A-21D-A219-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IS-01A-21D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IS-01A-21D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IS-01A-21D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IS-01A-21D-A219-01.seg.txt TCGA-DK-A3IS-01 BLCA-DK-A3IT-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.199.15.0/TCGA-DK-A3IT.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.199.15.0/TCGA-DK-A3IT.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-DK-A3IT-01A-31D-A210-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.8.7.0/TCGA-DK-A3IT-01A-31D-A211-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3IT-01A-31R-A20E-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3IT-01A-31R-A20E-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-DK-A3IT-01A-31R-A20F-07.data.txt 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/xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.199.2002.0/TCGA-DK-A3IT-01A-31D-A20B-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-DK-A3IT-01A-31D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-DK-A3IT-01A-31D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-DK-A3IT-01A-31D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-DK-A3IT-01A-31D-A20B-01.seg.txt TCGA-DK-A3IT-01 BLCA-DK-A3IU-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.199.15.0/TCGA-DK-A3IU.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-DK-A3IU-01A-11D-A210-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.8.7.0/TCGA-DK-A3IU-01A-11D-A211-05.data.txt 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/xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.207.13.0/TCGA-DK-A3IV.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.207.13.0/TCGA-DK-A3IV.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-DK-A3IV-01A-22D-A21C-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.10.7.0/TCGA-DK-A3IV-01A-22D-A21B-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3IV-01A-22R-A21E-13.data.txt 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/xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IV-01A-22D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IV-01A-22D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-DK-A3IV-01A-22D-A219-01.seg.txt TCGA-DK-A3IV-01 BLCA-DK-A3WW-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-DK-A3WW.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.12.7.0/TCGA-DK-A3WW-01A-22D-A23O-05.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.249.2005.0/TCGA-DK-A3WW-01A-22D-A23L-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-DK-A3WW-01A-22D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-DK-A3WW-01A-22D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-DK-A3WW-01A-22D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-DK-A3WW-01A-22D-A23L-01.seg.txt TCGA-DK-A3WW-01 BLCA-DK-A3WX-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-DK-A3WX.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-DK-A3WX-01A-22D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-DK-A3WX-01A-22D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3WX-01A-22R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3WX-01A-22R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-DK-A3WX-01A-22D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3WX-01A-22D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3WX-01A-22D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3WX-01A-22D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3WX-01A-22D-A22Y-01.seg.txt TCGA-DK-A3WX-01 BLCA-DK-A3WY-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-DK-A3WY.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-DK-A3WY-01A-11D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-DK-A3WY-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3WY-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3WY-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-DK-A3WY-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3WY-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3WY-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3WY-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3WY-01A-11D-A22Y-01.seg.txt TCGA-DK-A3WY-01 BLCA-DK-A3X1-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-DK-A3X1.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-DK-A3X1-01A-12D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-DK-A3X1-01A-12D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3X1-01A-12R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3X1-01A-12R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-DK-A3X1-01A-12D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3X1-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3X1-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3X1-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3X1-01A-12D-A22Y-01.seg.txt TCGA-DK-A3X1-01 BLCA-DK-A3X2-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-DK-A3X2.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-DK-A3X2-01A-11D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-DK-A3X2-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3X2-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-DK-A3X2-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-DK-A3X2-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3X2-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3X2-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3X2-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-DK-A3X2-01A-11D-A22Y-01.seg.txt TCGA-DK-A3X2-01 BLCA-E5-A2PC-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.192.14.0/TCGA-E5-A2PC.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.192.14.0/TCGA-E5-A2PC.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-E5-A2PC-01A-11D-A204-02.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.7.7.0/TCGA-E5-A2PC-01A-11D-A203-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E5-A2PC-01A-11R-A205-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E5-A2PC-01A-11R-A205-13.data.txt /xchip/gdac_data/normalized/diced/blca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BLCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-E5-A2PC-01A-21-A209-20.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BLCA.IlluminaHiSeq_RNASeq.Level_3.1.1.0/TCGA-E5-A2PC-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BLCA.IlluminaHiSeq_RNASeq.Level_3.1.1.0/TCGA-E5-A2PC-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BLCA.IlluminaHiSeq_RNASeq.Level_3.1.1.0/TCGA-E5-A2PC-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-E5-A2PC-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-E5-A2PC-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-E5-A2PC-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-E5-A2PC-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-E5-A2PC-01A-11R-A206-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.192.2002.0/TCGA-E5-A2PC-01A-11D-A201-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.192.2002.0/TCGA-E5-A2PC-01A-11D-A201-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.192.2002.0/TCGA-E5-A2PC-01A-11D-A201-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.192.2002.0/TCGA-E5-A2PC-01A-11D-A201-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.192.2002.0/TCGA-E5-A2PC-01A-11D-A201-01.seg.txt TCGA-E5-A2PC-01 BLCA-E7-A3X6-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-E7-A3X6.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-E7-A3X6-01A-12D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-E7-A3X6-01A-12D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E7-A3X6-01A-12R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E7-A3X6-01A-12R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-E7-A3X6-01A-12D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-E7-A3X6-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-E7-A3X6-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-E7-A3X6-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-E7-A3X6-01A-12D-A22Y-01.seg.txt TCGA-E7-A3X6-01 BLCA-E7-A3Y1-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-E7-A3Y1.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-E7-A3Y1-01A-11D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-E7-A3Y1-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E7-A3Y1-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E7-A3Y1-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-E7-A3Y1-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-E7-A3Y1-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-E7-A3Y1-01A-11D-A22Y-01.seg.txt 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/xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3N6-01A-11R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3N6-01A-11R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3N6-01A-11R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3N6-01A-11R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3N6-01A-11R-A21D-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.207.2002.0/TCGA-FD-A3N6-01A-11D-A219-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-FD-A3N6-01A-11D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-FD-A3N6-01A-11D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-FD-A3N6-01A-11D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-FD-A3N6-01A-11D-A219-01.seg.txt TCGA-FD-A3N6-01 BLCA-FD-A3NA-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.207.13.0/TCGA-FD-A3NA.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.207.13.0/TCGA-FD-A3NA.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3NA-01A-11D-A21C-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.10.7.0/TCGA-FD-A3NA-01A-11D-A21B-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3NA-01A-11R-A21E-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3NA-01A-11R-A21E-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3NA-01A-11R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3NA-01A-11R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3NA-01A-11R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3NA-01A-11R-A21D-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-FD-A3NA-01A-11R-A21D-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.207.2002.0/TCGA-FD-A3NA-01A-11D-A219-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-FD-A3NA-01A-11D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-FD-A3NA-01A-11D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-FD-A3NA-01A-11D-A219-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.207.2002.0/TCGA-FD-A3NA-01A-11D-A219-01.seg.txt TCGA-FD-A3NA-01 BLCA-FD-A3SJ-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SJ.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SJ-01A-12D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SJ-01A-12D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SJ-01A-12R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SJ-01A-12R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SJ-01A-12D-A22Y-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SL.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SL.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SL-01A-21D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SL-01A-21D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SL-01A-21R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SL-01A-21R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SL-01A-21D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SL-01A-21D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SL-01A-21D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SL-01A-21D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SL-01A-21D-A22Y-01.seg.txt TCGA-FD-A3SL-01 BLCA-FD-A3SM-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SM.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SM-01A-11D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SM-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SM-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SM-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SM-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SM-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SM-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SM-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SM-01A-11D-A22Y-01.seg.txt TCGA-FD-A3SM-01 BLCA-FD-A3SN-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SN.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SN.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SN-01A-12D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SN-01A-12D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SN-01A-12R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SN-01A-12R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SN-01A-12D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SN-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SN-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SN-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SN-01A-12D-A22Y-01.seg.txt TCGA-FD-A3SN-01 BLCA-FD-A3SO-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SO.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SO.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SO-01A-11D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SO-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SO-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SO-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SO-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SO-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SO-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SO-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SO-01A-11D-A22Y-01.seg.txt TCGA-FD-A3SO-01 BLCA-FD-A3SP-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SP.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SP.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SP-01A-31D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SP-01A-31D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SP-01A-31R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SP-01A-31R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SP-01A-31D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SP-01A-31D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SP-01A-31D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SP-01A-31D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SP-01A-31D-A22Y-01.seg.txt TCGA-FD-A3SP-01 BLCA-FD-A3SQ-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SQ.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SQ.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SQ-01A-21D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SQ-01A-21D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SQ-01A-21R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SQ-01A-21R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SQ-01A-21D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SQ-01A-21D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SQ-01A-21D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SQ-01A-21D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SQ-01A-21D-A22Y-01.seg.txt TCGA-FD-A3SQ-01 BLCA-FD-A3SR-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SR.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SR.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SR-01A-11D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SR-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SR-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SR-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SR-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SR-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SR-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SR-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SR-01A-11D-A22Y-01.seg.txt TCGA-FD-A3SR-01 BLCA-FD-A3SS-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SS.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-FD-A3SS.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-FD-A3SS-01A-12D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-FD-A3SS-01A-12D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SS-01A-12R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-FD-A3SS-01A-12R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-FD-A3SS-01A-12D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SS-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SS-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SS-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-FD-A3SS-01A-12D-A22Y-01.seg.txt TCGA-FD-A3SS-01 BLCA-FD-A43N-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-FD-A43N.clin.txt TP TCGA-FD-A43N BLCA-FD-A43P-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-FD-A43P.clin.txt TP TCGA-FD-A43P BLCA-FD-A43S-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-FD-A43S.clin.txt TP TCGA-FD-A43S BLCA-FD-A43U-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-FD-A43U.clin.txt TP TCGA-FD-A43U BLCA-FD-A43X-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.252.0.0/TCGA-FD-A43X.clin.txt TP TCGA-FD-A43X BLCA-FJ-A3Z7-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-FJ-A3Z7.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.12.7.0/TCGA-FJ-A3Z7-01A-12D-A23O-05.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.249.2005.0/TCGA-FJ-A3Z7-01A-12D-A23L-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-FJ-A3Z7-01A-12D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-FJ-A3Z7-01A-12D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-FJ-A3Z7-01A-12D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-FJ-A3Z7-01A-12D-A23L-01.seg.txt TCGA-FJ-A3Z7-01 BLCA-FJ-A3ZE-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-FJ-A3ZE.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.12.7.0/TCGA-FJ-A3ZE-01A-11D-A23O-05.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.249.2005.0/TCGA-FJ-A3ZE-01A-11D-A23L-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-FJ-A3ZE-01A-11D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-FJ-A3ZE-01A-11D-A23L-01.seg.txt 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/xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-G2-A3VY-01A-11D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-G2-A3VY-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-G2-A3VY-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-G2-A3VY-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-G2-A3VY-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-G2-A3VY-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-G2-A3VY-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-G2-A3VY-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-G2-A3VY-01A-11D-A22Y-01.seg.txt TCGA-G2-A3VY-01 BLCA-GC-A3BM-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-GC-A3BM.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-GC-A3BM-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3BM-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3BM-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-GC-A3BM-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3BM-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3BM-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3BM-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3BM-01A-11D-A22Y-01.seg.txt TCGA-GC-A3BM-01 BLCA-GC-A3I6-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.199.15.0/TCGA-GC-A3I6.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.199.15.0/TCGA-GC-A3I6.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-GC-A3I6-01A-11D-A210-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.8.7.0/TCGA-GC-A3I6-01A-11D-A211-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3I6-01A-11R-A20E-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3I6-01A-11R-A20E-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3I6-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3I6-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3I6-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3I6-01A-11R-A20F-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3I6-01A-11R-A20F-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.199.2002.0/TCGA-GC-A3I6-01A-11D-A20B-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-GC-A3I6-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-GC-A3I6-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-GC-A3I6-01A-11D-A20B-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.199.2002.0/TCGA-GC-A3I6-01A-11D-A20B-01.seg.txt TCGA-GC-A3I6-01 BLCA-GC-A3OO-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-GC-A3OO.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-GC-A3OO-01A-11D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-GC-A3OO-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3OO-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3OO-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-GC-A3OO-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3OO-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3OO-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3OO-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3OO-01A-11D-A22Y-01.seg.txt TCGA-GC-A3OO-01 BLCA-GC-A3RB-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.223.7.0/TCGA-GC-A3RB.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.11.7.0/TCGA-GC-A3RB-01A-12D-A223-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3RB-01A-12R-A222-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3RB-01A-12R-A222-13.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3RB-01A-12R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3RB-01A-12R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3RB-01A-12R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3RB-01A-12R-A220-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-GC-A3RB-01A-12R-A220-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.223.2004.0/TCGA-GC-A3RB-01A-12D-A21Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-GC-A3RB-01A-12D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-GC-A3RB-01A-12D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-GC-A3RB-01A-12D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-GC-A3RB-01A-12D-A21Y-01.seg.txt TCGA-GC-A3RB-01 BLCA-GC-A3RC-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-GC-A3RC.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-GC-A3RC-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3RC-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3RC-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-GC-A3RC-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3RC-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3RC-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3RC-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3RC-01A-11D-A22Y-01.seg.txt TCGA-GC-A3RC-01 BLCA-GC-A3RD-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-GC-A3RD.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-GC-A3RD-01A-12D-A233-25.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-GC-A3RD-01A-12D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3RD-01A-12R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GC-A3RD-01A-12R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-GC-A3RD-01A-12D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3RD-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3RD-01A-12D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-GC-A3RD-01A-12D-A22Y-01.seg.txt 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/xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-GV-A3QI-01A-11D-A21Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.223.2004.0/TCGA-GV-A3QI-01A-11D-A21Y-01.seg.txt TCGA-GV-A3QI-01 BLCA-GV-A3QK-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-GV-A3QK.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-GV-A3QK.clin.txt 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/xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.249.2005.0/TCGA-GV-A40E-01A-12D-A23L-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-GV-A40E-01A-12D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-GV-A40E-01A-12D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-GV-A40E-01A-12D-A23L-01.seg.txt 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/xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.170.2002.0/TCGA-H4-A2HO-01A-11D-A17S-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.170.2002.0/TCGA-H4-A2HO-01A-11D-A17S-01.seg.txt TCGA-H4-A2HO-01 BLCA-H4-A2HQ-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.170.22.0/TCGA-H4-A2HQ.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.170.22.0/TCGA-H4-A2HQ.clin.txt 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/xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-H4-A2HQ-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-H4-A2HQ-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-H4-A2HQ-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-H4-A2HQ-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-H4-A2HQ-01A-11R-A180-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.170.2002.0/TCGA-H4-A2HQ-01A-11D-A17S-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.170.2002.0/TCGA-H4-A2HQ-01A-11D-A17S-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.170.2002.0/TCGA-H4-A2HQ-01A-11D-A17S-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.170.2002.0/TCGA-H4-A2HQ-01A-11D-A17S-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.170.2002.0/TCGA-H4-A2HQ-01A-11D-A17S-01.seg.txt TCGA-H4-A2HQ-01 BLCA-HQ-A2OE-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.192.14.0/TCGA-HQ-A2OE.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.192.14.0/TCGA-HQ-A2OE.clin.txt /xchip/gdac_data/normalized/diced/blca/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_BLCA.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-HQ-A2OE-01A-11D-A204-02.seg.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.7.7.0/TCGA-HQ-A2OE-01A-11D-A203-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-HQ-A2OE-01A-11R-A205-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-HQ-A2OE-01A-11R-A205-13.data.txt /xchip/gdac_data/normalized/diced/blca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BLCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-HQ-A2OE-01A-21-A209-20.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BLCA.IlluminaHiSeq_RNASeq.Level_3.1.1.0/TCGA-HQ-A2OE-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BLCA.IlluminaHiSeq_RNASeq.Level_3.1.1.0/TCGA-HQ-A2OE-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BLCA.IlluminaHiSeq_RNASeq.Level_3.1.1.0/TCGA-HQ-A2OE-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-HQ-A2OE-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-HQ-A2OE-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-HQ-A2OE-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-HQ-A2OE-01A-11R-A206-07.data.txt /xchip/gdac_data/normalized/diced/blca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BLCA.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-HQ-A2OE-01A-11R-A206-07.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.192.2002.0/TCGA-HQ-A2OE-01A-11D-A201-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.192.2002.0/TCGA-HQ-A2OE-01A-11D-A201-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.192.2002.0/TCGA-HQ-A2OE-01A-11D-A201-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.192.2002.0/TCGA-HQ-A2OE-01A-11D-A201-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.192.2002.0/TCGA-HQ-A2OE-01A-11D-A201-01.seg.txt TCGA-HQ-A2OE-01 BLCA-K4-A3WS-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-K4-A3WS.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-K4-A3WS.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-K4-A3WS-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-K4-A3WS-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-K4-A3WS-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-K4-A3WS-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-K4-A3WS-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-K4-A3WS-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-K4-A3WS-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-K4-A3WS-01A-11D-A22Y-01.seg.txt TCGA-K4-A3WS-01 BLCA-K4-A3WU-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-K4-A3WU.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.249.3.0/TCGA-K4-A3WU.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.12.7.0/TCGA-K4-A3WU-01B-11D-A23O-05.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.249.2005.0/TCGA-K4-A3WU-01B-11D-A23L-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-K4-A3WU-01B-11D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-K4-A3WU-01B-11D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-K4-A3WU-01B-11D-A23L-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.249.2005.0/TCGA-K4-A3WU-01B-11D-A23L-01.seg.txt TCGA-K4-A3WU BLCA-K4-A3WV-TP /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-K4-A3WV.clin.txt /xchip/gdac_data/normalized/diced/blca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BLCA.bio.Level_1.235.8.0/TCGA-K4-A3WV.clin.txt /xchip/gdac_data/normalized/diced/blca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BLCA.HumanMethylation450.Level_3.9.7.0/TCGA-K4-A3WV-01A-11D-A231-05.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-K4-A3WV-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/blca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BLCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-K4-A3WV-01A-11R-A22V-13.data.txt TP /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_2.235.2006.0/TCGA-K4-A3WV-01A-11D-A22Y-01.birdseed.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-K4-A3WV-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-K4-A3WV-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-K4-A3WV-01A-11D-A22Y-01.seg.txt /xchip/gdac_data/normalized/diced/blca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BLCA.Genome_Wide_SNP_6.Level_3.235.2006.0/TCGA-K4-A3WV-01A-11D-A22Y-01.seg.txt TCGA-K4-A3WV-01 BRCA-A1-A0SB-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-A1-A0SB.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-A1-A0SB.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.11.4.0/TCGA-A1-A0SB-01A-11D-A145-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A1-A0SB-01A-11R-A143-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A1-A0SB-01A-11R-A143-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A1-A0SB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A1-A0SB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A1-A0SB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A1-A0SB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A1-A0SB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A1-A0SB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A1-A0SB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A1-A0SB-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-A1-A0SB-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-A1-A0SB-01A-11D-A141-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.3.0.0/TCGA-A1-A0SO-01A-22R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.3.0.0/TCGA-A1-A0SO-01A-22R-A084-07.data.txt BRCA-A1-A0SP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-A1-A0SP.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-A1-A0SP.clin.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.3.0.0/TCGA-A1-A0SP-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.3.0.0/TCGA-A1-A0SP-01A-11R-A084-07.data.txt BRCA-A1-A0SQ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-A1-A0SQ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-A1-A0SQ.clin.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-A2-A04N.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-A2-A04N.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-A2-A04N-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A04N-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A04N-01A-11R-A114-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A04R-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A04R-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.6.0.0/TCGA-A2-A04R-01A-41R-A109-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.6.0.0/TCGA-A2-A04R-01A-41R-A109-07.data.txt BRCA-A2-A04T-TP 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A04W-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A04W-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-A2-A04W-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-A2-A04W-01A-31R-A115-07.data.txt BRCA-A2-A04X-TP 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A04Y-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A2-A04Y-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A2-A04Y-01A-21R-A034-07.data.txt BRCA-A2-A0CK-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-A2-A0CK.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-A2-A0CK-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A0CK-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A0CK-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-A2-A0CK-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A2-A0CK-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A2-A0CK-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A2-A0CK-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A2-A0CK-01A-11D-A227-01.seg.txt TCGA-A2-A0CK-01 BRCA-A2-A0CL-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-A2-A0CL.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-A2-A0CL.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-A2-A0CL-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A0CL-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A0CL-01A-11R-A114-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0CL-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-A2-A0CL-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-A2-A0CL-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-A2-A0CL-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-A2-A0CL-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-A2-A0CL-01A-11D-A111-01.seg.txt TCGA-A2-A0CL-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0CL-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0CL-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-A2-A0CL-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-A2-A0CL-01A-11R-A115-07.data.txt BRCA-A2-A0CM-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A2-A0CM.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A2-A0CM.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0CM-01A-31R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0CM-01A-31R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0CM-01A-31R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0CM-01A-31R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-A2-A0CM-01A-31D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0CM-01A-31D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0CM-01A-31D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0CM-01A-31D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0CM-01A-31D-A036-01.seg.txt TCGA-A2-A0CM-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0CM-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0CM-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A2-A0CM-01A-31R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A2-A0CM-01A-31R-A034-07.data.txt BRCA-A2-A0CO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-A2-A0CO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-A2-A0CO-01A-13D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A0CO-01A-13R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A0CO-01A-13R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-A2-A0CO-01A-13D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A2-A0CO-01A-13D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A2-A0CO-01A-13D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A2-A0CO-01A-13D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A2-A0CO-01A-13D-A227-01.seg.txt TCGA-A2-A0CO-01 BRCA-A2-A0CP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A2-A0CP.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A2-A0CP.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-A2-A0CP-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0CP-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0CP-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0CP-01A-11D-A036-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0CQ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A2-A0CQ-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A2-A0CQ-01A-21R-A034-07.data.txt BRCA-A2-A0CR-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-A2-A0CR.clin.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-A2-A0CV-01A-31R-A115-07.data.txt BRCA-A2-A0CW-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-A2-A0CW.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-A2-A0CW.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-A2-A0CW-01A-21D-A112-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A2-A0CY-01A-12R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A2-A0CY-01A-12R-A034-07.data.txt BRCA-A2-A0CZ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A2-A0CZ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A2-A0CZ.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0EM-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0EM-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A2-A0EM-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A2-A0EM-01A-11R-A034-07.data.txt BRCA-A2-A0EN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-A2-A0EN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-A2-A0EN.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.4.4.0/TCGA-A2-A0EN-01A-13D-A10P-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A2-A0EN-01A-13R-A085-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A2-A0EN-01A-13R-A085-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.72.2002.0/TCGA-A2-A0EN-01A-13D-A087-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-A2-A0EN-01A-13D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-A2-A0EN-01A-13D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-A2-A0EN-01A-13D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-A2-A0EN-01A-13D-A087-01.seg.txt TCGA-A2-A0EN-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0EN-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0EN-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.3.0.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.3.0.0/TCGA-A2-A0EN-01A-13R-A084-07.data.txt BRCA-A2-A0EO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A2-A0EO.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A2-A0EO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-A2-A0EO-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A2-A0EO-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A2-A0EO-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A2-A0EO-01A-21-A13B-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-A2-A0EO-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0EO-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0EO-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0EO-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0EO-01A-11D-A036-01.seg.txt TCGA-A2-A0EO-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0EO-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A2-A0EO-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A2-A0EO-01A-11R-A034-07.data.txt BRCA-A2-A0EP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-A2-A0EP.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-A2-A0EQ-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0EQ-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0EQ-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A2-A0EQ-01A-11D-A036-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A1G6-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-A2-A1G6-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-A2-A1G6-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-A2-A1G6-01A-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-A2-A25A-01A-12D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-A2-A25A-01A-12D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-A2-A25A-01A-12D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-A2-A25A-01A-12D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25C-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25C-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25C-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25C-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A2-A25C-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25C-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25C-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25C-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25C-01A-11D-A166-01.seg.txt TCGA-A2-A25C BRCA-A2-A25D-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-A2-A25D.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-A2-A25D.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-A2-A25D-01A-12D-A16G-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A25D-01A-12R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A25D-01A-12R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25D-01A-12R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25D-01A-12R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25D-01A-12R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25D-01A-12R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25D-01A-12R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25D-01A-12R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25D-01A-12R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25D-01A-12R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-A2-A25D-01A-12D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-A2-A25D-01A-12D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-A2-A25D-01A-12D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-A2-A25D-01A-12D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-A2-A25D-01A-12D-A16C-01.seg.txt TCGA-A2-A25D BRCA-A2-A25E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A2-A25E.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25E-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A2-A25E-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25E-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25E-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25E-01A-11D-A166-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25F-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25F-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A2-A25F-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25F-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25F-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25F-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25F-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A25F-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A2-A25F-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25F-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25F-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25F-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A2-A25F-01A-11D-A166-01.seg.txt TCGA-A2-A25F BRCA-A2-A3KC-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A2-A3KC.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.21.4.0/TCGA-A2-A3KC-01A-11D-A212-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3KC-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3KC-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KC-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KC-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KC-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KC-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KC-01A-11R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-A2-A3KC-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A2-A3KC-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A2-A3KC-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A2-A3KC-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A2-A3KC-01A-11D-A20R-01.seg.txt TCGA-A2-A3KC-01 BRCA-A2-A3KD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A2-A3KD.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A2-A3KD.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.21.4.0/TCGA-A2-A3KD-01A-12D-A212-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3KD-01A-12R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3KD-01A-12R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KD-01A-12R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KD-01A-12R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KD-01A-12R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KD-01A-12R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A2-A3KD-01A-12R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-A2-A3KD-01A-12D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A2-A3KD-01A-12D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A2-A3KD-01A-12D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A2-A3KD-01A-12D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A2-A3KD-01A-12D-A20R-01.seg.txt TCGA-A2-A3KD BRCA-A2-A3XS-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-A2-A3XS.clin.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3XS-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3XS-01A-11R-A22V-13.data.txt TP TCGA-A2-A3XS-01 BRCA-A2-A3XT-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-A2-A3XT.clin.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3XT-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3XT-01A-11R-A22V-13.data.txt TP TCGA-A2-A3XT-01 BRCA-A2-A3XU-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-A2-A3XU.clin.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3XU-01A-12R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A2-A3XU-01A-12R-A22V-13.data.txt TP TCGA-A2-A3XU-01 BRCA-A2-A3XV-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-A2-A3XV.clin.txt TP TCGA-A2-A3XV BRCA-A2-A3XW-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-A2-A3XW.clin.txt TP TCGA-A2-A3XW BRCA-A2-A3XX-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-A2-A3XX.clin.txt TP TCGA-A2-A3XX BRCA-A2-A3XY-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-A2-A3XY.clin.txt TP TCGA-A2-A3XY BRCA-A2-A3XZ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-A2-A3XZ.clin.txt TP TCGA-A2-A3XZ BRCA-A2-A3Y0-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-A2-A3Y0.clin.txt TP TCGA-A2-A3Y0 BRCA-A7-A0CD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A7-A0CD.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A7-A0CD.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A7-A0CD-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A7-A0CD-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A7-A0CD-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A7-A0CD-01A-21-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A7-A0CD-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0CD-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0CD-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0CD-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0CD-01A-11D-A011-01.seg.txt TCGA-A7-A0CD-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A0CD-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A0CD-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A7-A0CD-01A-11R-A00Z-07.data.txt BRCA-A7-A0CE-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A7-A0CE.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A7-A0CE.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A7-A0CE-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A7-A0CE-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A7-A0CE-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A7-A0CE-01A-21-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A0CE-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A0CE-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A0CE-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CE-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CE-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CE-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CE-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A0CE-01A-11R-A00Z-07.data.txt TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0CJ-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0CJ-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0CJ-01A-21D-A011-01.seg.txt TCGA-A7-A0CJ-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A0CJ-01.wig.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-A7-A0D9-01A-31D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-A7-A0D9-01A-31D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-A7-A0D9-01A-31D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-A7-A0D9-01A-31D-A059-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A0DA-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A0DA-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-A7-A0DA-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-A7-A0DA-01A-31R-A115-07.data.txt BRCA-A7-A0DB-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0DB-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A7-A0DB-01A-11D-A011-01.seg.txt TCGA-A7-A0DB-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A0DB-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A0DB-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A7-A0DB-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A7-A0DB-01A-11R-A00Z-07.data.txt BRCA-A7-A13D-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-A7-A13D.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-A7-A13D.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-A7-A13D-01A-13D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-A7-A13D-01A-13D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-A7-A13D-01A-13D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-A7-A13D-01A-13D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-A7-A13D-01A-13D-A12N-01.seg.txt TCGA-A7-A13D-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A13D-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A13D-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-A7-A13D-01A-13R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-A7-A13D-01A-13R-A12P-07.data.txt BRCA-A7-A13E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-A7-A13E.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-A7-A13E.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-A7-A13E-01A-11D-A12R-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13E-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13E-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13E-01A-11R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-A7-A13E-01A-11D-A12N-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-A7-A13E-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-A7-A13E-01A-11R-A12P-07.data.txt BRCA-A7-A13F-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-A7-A13F.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-A7-A13F.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13F-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13F-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13F-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13F-01A-11R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-A7-A13F-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-A7-A13F-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-A7-A13F-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-A7-A13F-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-A7-A13F-01A-11D-A12N-01.seg.txt TCGA-A7-A13F-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A13F-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A7-A13F-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-A7-A13F-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-A7-A13F-01A-11R-A12P-07.data.txt BRCA-A7-A13G-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-A7-A13G.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-A7-A13G.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-A7-A13G-01B-04D-A22R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A13G-01B-04R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A13G-01B-04R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A13G-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A13G-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A13G-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13G-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13G-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13G-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13G-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A13G-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-A7-A13G-01B-04D-A22Q-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-A7-A13G-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-A7-A13G-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-A7-A13G-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-A7-A13G-01A-11D-A13J-01.seg.txt TCGA-A7-A13G BRCA-A7-A13H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-A7-A13H.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-A7-A13H-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A13H-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A13H-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-A7-A13H-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A7-A13H-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A7-A13H-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A7-A13H-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A7-A13H-01A-11D-A227-01.seg.txt TCGA-A7-A13H-01 BRCA-A7-A26E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26E.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26E.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-A7-A26E-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26E-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26E-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26E-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26E-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A7-A26E-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26E-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26E-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26E-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26E-01A-11D-A166-01.seg.txt TCGA-A7-A26E BRCA-A7-A26F-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26F.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26F.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-A7-A26F-01B-04D-A22R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26F-01B-04R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26F-01B-04R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26F-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26F-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26F-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26F-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26F-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26F-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26F-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26F-01A-21R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A7-A26F-01B-04D-A22Q-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26F-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26F-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26F-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26F-01A-21D-A166-01.seg.txt TCGA-A7-A26F BRCA-A7-A26G-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26G.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26G.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-A7-A26G-01A-21D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26G-01A-21R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26G-01A-21R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26G-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26G-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26G-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26G-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26G-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26G-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26G-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26G-01A-21R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A7-A26G-01A-21D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26G-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26G-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26G-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26G-01A-21D-A166-01.seg.txt TCGA-A7-A26G BRCA-A7-A26H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26H.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26H.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-A7-A26H-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26H-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26H-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26H-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26H-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26H-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26H-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26H-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26H-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26H-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26H-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A7-A26H-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26H-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26H-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26H-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26H-01A-11D-A166-01.seg.txt TCGA-A7-A26H BRCA-A7-A26I-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26I.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26I-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26I-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26I-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26I-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26I-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26I-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26I-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26I-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A7-A26I-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26I-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26I-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26I-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26I-01A-11D-A166-01.seg.txt TCGA-A7-A26I BRCA-A7-A26J-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26J.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-A7-A26J.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-A7-A26J-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26J-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A26J-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26J-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26J-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A7-A26J-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26J-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26J-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26J-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26J-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A26J-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-A7-A26J-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26J-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26J-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26J-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-A7-A26J-01A-11D-A166-01.seg.txt TCGA-A7-A26J BRCA-A7-A2KD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-A7-A2KD.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-A7-A2KD.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.4.0/TCGA-A7-A2KD-01A-31D-A21R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A2KD-01A-31R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A2KD-01A-31R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A2KD-01A-31R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A2KD-01A-31R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A2KD-01A-31R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A2KD-01A-31R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A2KD-01A-31R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-A7-A2KD-01A-31D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-A7-A2KD-01A-31D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-A7-A2KD-01A-31D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-A7-A2KD-01A-31D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-A7-A2KD-01A-31D-A21P-01.seg.txt TCGA-A7-A2KD BRCA-A7-A3IY-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-A7-A3IY.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-A7-A3IY.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.4.0/TCGA-A7-A3IY-01A-21D-A21R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3IY-01A-21R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3IY-01A-21R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IY-01A-21R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IY-01A-21R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IY-01A-21R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IY-01A-21R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IY-01A-21R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-A7-A3IY-01A-21D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-A7-A3IY-01A-21D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-A7-A3IY-01A-21D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-A7-A3IY-01A-21D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-A7-A3IY-01A-21D-A21P-01.seg.txt TCGA-A7-A3IY BRCA-A7-A3IZ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A7-A3IZ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A7-A3IZ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.21.4.0/TCGA-A7-A3IZ-01A-11D-A212-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3IZ-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3IZ-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IZ-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IZ-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IZ-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IZ-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3IZ-01A-11R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-A7-A3IZ-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3IZ-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3IZ-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3IZ-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3IZ-01A-11D-A20R-01.seg.txt TCGA-A7-A3IZ BRCA-A7-A3J0-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A7-A3J0.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A7-A3J0.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.21.4.0/TCGA-A7-A3J0-01A-11D-A212-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3J0-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3J0-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J0-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J0-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J0-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J0-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J0-01A-11R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-A7-A3J0-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3J0-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3J0-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3J0-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3J0-01A-11D-A20R-01.seg.txt TCGA-A7-A3J0 BRCA-A7-A3J1-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A7-A3J1.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-A7-A3J1.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.21.4.0/TCGA-A7-A3J1-01A-11D-A212-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3J1-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3J1-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J1-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J1-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J1-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J1-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A7-A3J1-01A-11R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-A7-A3J1-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3J1-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3J1-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3J1-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-A7-A3J1-01A-11D-A20R-01.seg.txt TCGA-A7-A3J1 BRCA-A7-A3RF-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-A7-A3RF.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-A7-A3RF.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-A7-A3RF-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3RF-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-A7-A3RF-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-A7-A3RF-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A7-A3RF-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A7-A3RF-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A7-A3RF-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-A7-A3RF-01A-11D-A227-01.seg.txt TCGA-A7-A3RF BRCA-A7-A425-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-A7-A425.clin.txt TP TCGA-A7-A425 BRCA-A7-A426-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-A7-A426.clin.txt TP TCGA-A7-A426 BRCA-A8-A06N-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A06N.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A06N.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A06N-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A06N-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A06N-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A06N-01A-21-A13B-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06N-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A06N-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06N-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06N-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06N-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06N-01A-11D-A011-01.seg.txt TCGA-A8-A06N-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06N-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06N-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A06N-01A-12R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A06N-01A-12R-A056-07.data.txt BRCA-A8-A06O-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A06O.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A06O.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A06O-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A06O-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A06O-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A06O-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06O-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06O-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06O-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06O-01A-11D-A011-01.seg.txt TCGA-A8-A06O-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06O-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06O-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A06O-01A-11R-A00Z-07.data.txt BRCA-A8-A06P-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A06P.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A06P.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A06P-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A06P-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A06P-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A06P-01A-21-A13B-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A06P-01A-11R-A00Z-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A06P-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A06P-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06P-01A-11D-A011-01.seg.txt TCGA-A8-A06P-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06P-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06P-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A06P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A06P-01A-11R-A00Z-07.data.txt BRCA-A8-A06Q-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A06Q.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A06Q.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A06Q-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A06Q-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A06Q-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A06Q-01A-11D-A036-01.seg.txt TCGA-A8-A06Q-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06Q-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06Q-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A06Q-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A06Q-01A-11R-A034-07.data.txt BRCA-A8-A06R-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06R-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06R-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06R-01A-11D-A011-01.seg.txt TCGA-A8-A06R-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06R-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06R-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A06R-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A06R-01A-11R-A00Z-07.data.txt BRCA-A8-A06T-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A06T.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A06T.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06T-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06T-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A06T-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A06T-01A-11R-A00Z-07.data.txt BRCA-A8-A06U-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A06Y-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06Y-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06Y-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06Y-01A-21D-A011-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06Z-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06Z-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A06Z-01A-11D-A011-01.seg.txt TCGA-A8-A06Z-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A06Z-01.wig.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.72.2002.0/TCGA-A8-A075-01A-11D-A087-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-A8-A075-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-A8-A075-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-A8-A075-01A-11D-A087-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A076-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A076-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A076-01A-21D-A011-01.seg.txt TCGA-A8-A076-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A076-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A076-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A076-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A076-01A-21R-A00Z-07.data.txt BRCA-A8-A079-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A079.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A079.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A079-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A079-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A079-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A079-01A-21R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A079-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A079-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A079-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A079-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A079-01A-21D-A011-01.seg.txt TCGA-A8-A079-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A079-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A079-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A079-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A079-01A-21R-A00Z-07.data.txt BRCA-A8-A07B-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A07B.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A07B.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A07B-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A07B-01A-11R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A07B-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A07B-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07B-01A-11D-A011-01.seg.txt TCGA-A8-A07B-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07B-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07B-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A07B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A07B-01A-11R-A00Z-07.data.txt BRCA-A8-A07C-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A07C.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A07C.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07C-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07C-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A07C-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A07C-01A-11R-A034-07.data.txt BRCA-A8-A07E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A07E.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A07E.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-A8-A07E-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A07E-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A07E-01A-11R-A035-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A07I-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A07I-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07I-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07I-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07I-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07I-01A-11D-A011-01.seg.txt TCGA-A8-A07I-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07I-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07I-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A07I-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A07I-01A-11R-A00Z-07.data.txt BRCA-A8-A07J-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A07J.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A07J.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07J-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07J-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A07J-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A07J-01A-11R-A00Z-07.data.txt BRCA-A8-A07L-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A07L-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07L-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07L-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07L-01A-11D-A011-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-A8-A07S-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A07S-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A07S-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A07S-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A07S-01A-11D-A036-01.seg.txt TCGA-A8-A07S /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A07S-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A07S-01A-11R-A034-07.data.txt BRCA-A8-A07U-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A07U.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A07U-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A07U-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A07U-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A07U-01A-11D-A036-01.seg.txt TCGA-A8-A07U-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07U-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07U-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A07U-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A07U-01A-11R-A034-07.data.txt BRCA-A8-A07W-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07W-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07W-01A-11D-A011-01.seg.txt TCGA-A8-A07W-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07W-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07W-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A07W-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A07W-01A-11R-A00Z-07.data.txt BRCA-A8-A07Z-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A07Z.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A07Z.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A07Z-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07Z-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07Z-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07Z-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A07Z-01A-11D-A011-01.seg.txt TCGA-A8-A07Z-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07Z-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A07Z-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A07Z-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A07Z-01A-11R-A00Z-07.data.txt BRCA-A8-A081-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A081.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A081.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A081-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A081-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A081-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A081-01A-21-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A081-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A081-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A081-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A081-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A081-01A-11D-A011-01.seg.txt TCGA-A8-A081-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A081-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A081-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A081-01A-11R-A00Z-07.data.txt BRCA-A8-A082-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A082.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A082.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A082-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A082-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A082-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A082-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A082-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A082-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A082-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A082-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A082-01A-11D-A011-01.seg.txt TCGA-A8-A082-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A082-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A082-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A082-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A082-01A-11R-A00Z-07.data.txt BRCA-A8-A083-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A083.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A083.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A083-01A-21D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A083-01A-21R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A083-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A083-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A083-01A-21R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A083-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A083-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A083-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A083-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A083-01A-21D-A011-01.seg.txt TCGA-A8-A083-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A083-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A083-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A083-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A083-01A-21R-A00Z-07.data.txt BRCA-A8-A084-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08A-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08A-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08A-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08A-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08A-01A-11D-A011-01.seg.txt TCGA-A8-A08A-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08A-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08A-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08A-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08A-01A-11R-A00Z-07.data.txt BRCA-A8-A08B-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08B.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08B.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A08B-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A08B-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A08B-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08B-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08B-01A-11D-A011-01.seg.txt TCGA-A8-A08B-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08B-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08B-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08B-01A-11R-A00Z-07.data.txt BRCA-A8-A08C-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08C.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08C.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08C-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08C-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08C-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08C-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08C-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08C-01A-11D-A011-01.seg.txt TCGA-A8-A08C-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08C-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08C-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08C-01A-11R-A00Z-07.data.txt BRCA-A8-A08F-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08F.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08F.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08F-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08F-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08F-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08F-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08F-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08F-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08F-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08F-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08F-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08F-01A-11D-A011-01.seg.txt TCGA-A8-A08F-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08F-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08F-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08F-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08F-01A-11R-A00Z-07.data.txt BRCA-A8-A08G-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08G.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08G.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08G-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08G-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08G-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08G-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08G-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08G-01A-11D-A011-01.seg.txt TCGA-A8-A08G-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08G-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08G-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08G-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08G-01A-11R-A00Z-07.data.txt BRCA-A8-A08H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08H.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08H.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08H-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08H-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08H-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08H-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08H-01A-21D-A011-01.seg.txt TCGA-A8-A08H-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08H-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08H-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08H-01A-21R-A00Z-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08I-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08I-01A-11D-A011-01.seg.txt TCGA-A8-A08I-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08I-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08I-01.maf.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08P-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08P-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08P-01A-11D-A011-01.seg.txt TCGA-A8-A08P-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08P-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08P-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08P-01A-11R-A00Z-07.data.txt BRCA-A8-A08R-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A08R.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A08R.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A08R-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A08R-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A08R-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A08R-01A-11D-A036-01.seg.txt TCGA-A8-A08R-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08R-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08R-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08R-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08R-01A-11R-A034-07.data.txt BRCA-A8-A08S-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A08S.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A08S.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-A8-A08S-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A08S-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A08S-01A-11R-A035-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-A8-A08S-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A08S-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A08S-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A08S-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A08S-01A-11D-A036-01.seg.txt TCGA-A8-A08S /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08S-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08S-01A-11R-A034-07.data.txt BRCA-A8-A08T-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08T.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A08T-01A-21R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08T-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08T-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08T-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08T-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08T-01A-21D-A011-01.seg.txt TCGA-A8-A08T-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08T-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08T-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08T-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08T-01A-21R-A00Z-07.data.txt BRCA-A8-A08X-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08X.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A08X.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A08X-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08X-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08X-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08X-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A08X-01A-21D-A011-01.seg.txt TCGA-A8-A08X-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08X-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08X-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08X-01A-21R-A00Z-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08Z-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A08Z-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A08Z-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A08Z-01A-21R-A00Z-07.data.txt BRCA-A8-A090-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A090.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A090.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A090-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A090-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A090-01A-11R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A090-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A090-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A090-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A090-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A090-01A-11D-A011-01.seg.txt TCGA-A8-A090-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A090-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A090-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A090-01A-11R-A00Z-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A092-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A092-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A092-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A092-01A-11R-A00Z-07.data.txt BRCA-A8-A093-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A093-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A093-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A093-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A093-01A-11D-A011-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A093-01A-11R-A00Z-07.data.txt BRCA-A8-A094-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A094.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A094.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A094-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A094-01A-11R-A038-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A094-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A094-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A094-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A094-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A094-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A094-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A094-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A094-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A094-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A094-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A094-01A-11D-A011-01.seg.txt TCGA-A8-A094-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A094-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A094-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A094-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A094-01A-11R-A00Z-07.data.txt BRCA-A8-A095-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A095.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A095.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A095-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A095-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A095-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A095-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A095-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A095-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A095-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A095-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A095-01A-11D-A011-01.seg.txt TCGA-A8-A095-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A095-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A095-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A095-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A095-01A-11R-A00Z-07.data.txt BRCA-A8-A096-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A096.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A096.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A096-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A096-01A-11R-A038-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A096-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A096-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A096-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A096-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A096-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A096-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A096-01A-11D-A011-01.seg.txt TCGA-A8-A096-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A096-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A096-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A096-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A096-01A-11R-A00Z-07.data.txt BRCA-A8-A097-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A097.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A097.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A097-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A097-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A097-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A097-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A097-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A097-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A097-01A-11R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-A8-A097-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A097-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A097-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A097-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A097-01A-11D-A036-01.seg.txt TCGA-A8-A097-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A097-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A097-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A097-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A097-01A-11R-A034-07.data.txt BRCA-A8-A099-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A099.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A099.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A099-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A099-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A099-01A-11R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A099-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A099-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A099-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A099-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A099-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A099-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A099-01A-11D-A011-01.seg.txt TCGA-A8-A099-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A099-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A099-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A099-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A099-01A-11R-A00Z-07.data.txt BRCA-A8-A09A-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09A.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09A.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09A-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09A-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09A-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09A-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09A-01A-11D-A011-01.seg.txt TCGA-A8-A09A-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09A-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09A-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09A-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09A-01A-11R-A00Z-07.data.txt BRCA-A8-A09B-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09B.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09B.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09B-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09B-01A-11R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09B-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09B-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09B-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09B-01A-11D-A011-01.seg.txt TCGA-A8-A09B-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09B-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09B-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09B-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09B-01A-11R-A00Z-07.data.txt BRCA-A8-A09C-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09C.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09C.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09C-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09C-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09C-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A09C-01A-21-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09C-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09C-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09C-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09C-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09C-01A-11D-A011-01.seg.txt TCGA-A8-A09C-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09C-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09C-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09C-01A-11R-A00Z-07.data.txt BRCA-A8-A09D-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09D.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09D.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09D-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09D-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09D-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09D-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09D-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09D-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09D-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09D-01A-11D-A011-01.seg.txt TCGA-A8-A09D-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09D-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09D-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09D-01A-11R-A00Z-07.data.txt BRCA-A8-A09E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09E.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09E.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09E-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09E-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09E-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A09E-01A-21-A13A-20.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09E-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09E-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09E-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09E-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09E-01A-11D-A011-01.seg.txt TCGA-A8-A09E /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09E-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09E-01A-11R-A00Z-07.data.txt BRCA-A8-A09G-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09G.clin.txt 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/xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A09G-01A-11-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09G-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09G-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09G-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09G-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09G-01A-21D-A011-01.seg.txt TCGA-A8-A09G-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09G-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09G-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09G-01A-21R-A00Z-07.data.txt BRCA-A8-A09I-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A09I.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A09I.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-A8-A09I-01A-22D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09I-01A-22R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09I-01A-22R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A09I-01A-11-A13A-20.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09I-01A-22R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09I-01A-22R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09I-01A-22R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09I-01A-22R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-A8-A09I-01A-22D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A09I-01A-22D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A09I-01A-22D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A09I-01A-22D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A09I-01A-22D-A036-01.seg.txt TCGA-A8-A09I-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09I-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09I-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09I-01A-22R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09I-01A-22R-A034-07.data.txt BRCA-A8-A09K-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09K.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09K.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09K-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09K-01A-11R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09K-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09K-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09K-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09K-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09K-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09K-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09K-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09K-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09K-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09K-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09K-01A-11D-A011-01.seg.txt TCGA-A8-A09K /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09K-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09K-01A-11R-A00Z-07.data.txt BRCA-A8-A09M-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09M.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09M.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09M-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09M-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09M-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A09M-01A-21-A13B-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09M-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09M-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09M-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09M-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09M-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09M-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09M-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09M-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09M-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09M-01A-11D-A011-01.seg.txt TCGA-A8-A09M-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09M-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09M-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09M-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09M-01A-11R-A00Z-07.data.txt BRCA-A8-A09N-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09N.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09N.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09N-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09N-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09N-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09N-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09N-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09N-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09N-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09N-01A-11D-A011-01.seg.txt TCGA-A8-A09N-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09N-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09N-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09N-01A-11R-A00Z-07.data.txt BRCA-A8-A09Q-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09Q.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09Q.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09Q-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09Q-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09Q-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09Q-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09Q-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09Q-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09Q-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09Q-01A-11D-A011-01.seg.txt TCGA-A8-A09Q-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09Q-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09Q-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09Q-01A-11R-A00Z-07.data.txt BRCA-A8-A09R-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09R.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09R.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09R-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09R-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09R-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09R-01A-11R-A00Z-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09R-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09R-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09R-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09R-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09R-01A-11D-A011-01.seg.txt TCGA-A8-A09R-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09R-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09R-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09R-01A-11R-A00Z-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09T-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09T-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09T-01A-11D-A011-01.seg.txt TCGA-A8-A09T-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09T-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09T-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09T-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09T-01A-11R-A00Z-07.data.txt BRCA-A8-A09V-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A09V.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A09V.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A09V-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-A8-A09V-01A-11D-A036-01.seg.txt TCGA-A8-A09V-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09V-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09V-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09V-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09V-01A-11R-A034-07.data.txt BRCA-A8-A09W-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09W.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09W.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09W-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09W-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09W-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09W-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09W-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09W-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09W-01A-11D-A011-01.seg.txt TCGA-A8-A09W-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09W-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09W-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09W-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09W-01A-11R-A00Z-07.data.txt BRCA-A8-A09X-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09X.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09X.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09X-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09X-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09X-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A09X-01A-21-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09X-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09X-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09X-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09X-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09X-01A-11D-A011-01.seg.txt TCGA-A8-A09X-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09X-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A09X-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09X-01A-11R-A00Z-07.data.txt BRCA-A8-A09Z-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09Z.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A09Z.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A09Z-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09Z-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A09Z-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A8-A09Z-01A-21-A13A-20.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A09Z-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09Z-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09Z-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09Z-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A09Z-01A-11D-A011-01.seg.txt TCGA-A8-A09Z /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A09Z-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A09Z-01A-11R-A00Z-07.data.txt BRCA-A8-A0A1-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A0A1.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A0A1.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A0A1-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A0A1-01A-11R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A0A1-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A0A1-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A0A1-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A0A1-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A0A1-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A0A1-01A-11D-A011-01.seg.txt TCGA-A8-A0A1-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A0A1-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A0A1-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A0A1-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A0A1-01A-11R-A00Z-07.data.txt BRCA-A8-A0A2-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A0A2.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A0A2.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A0A2-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A0A2-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A0A2-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A0A2-01A-11R-A034-07.data.txt BRCA-A8-A0A4-TP 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A0A4-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A0A4-01A-11R-A00Z-07.data.txt BRCA-A8-A0A6-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-A8-A0A6.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-A8-A0A6.clin.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-A8-A0A6-01A-12R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-A8-A0A6-01A-12R-A056-07.data.txt BRCA-A8-A0A7-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A0A7.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A0A7.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-A8-A0A7-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A0A7-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A0A7-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-A8-A0A7-01A-11D-A011-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A0A7-01A-11R-A040-07.data.txt BRCA-A8-A0A9-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A0A9.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-A8-A0A9.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-A8-A0A9-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-A8-A0A9-01A-11R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A0A9-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A0A9-01A-11R-A00Z-07.data.txt BRCA-A8-A0AB-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A0AB.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-A8-A0AB.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A0AB-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A0AB-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-A8-A0AB-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-A8-A0AB-01A-11R-A034-07.data.txt BRCA-A8-A0AD-TP 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A0AD-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A0AD-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A0AD-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-A8-A0AD-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-A8-A0AD-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-A8-A0AD-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-A8-A0AD-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-A8-A0AD-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-A8-A0AD-01A-11D-A059-01.seg.txt TCGA-A8-A0AD-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A0AD-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-A8-A0AD-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-A8-A0AD-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-A8-A0AD-01A-11R-A056-07.data.txt BRCA-AC-A23C-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AC-A23C.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AC-A23C.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AC-A23C-01A-12D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A23C-01A-12R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A23C-01A-12R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23C-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23C-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23C-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23C-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23C-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23C-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23C-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23C-01A-12R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AC-A23C-01A-12D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AC-A23C-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AC-A23C-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AC-A23C-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AC-A23C-01A-12D-A166-01.seg.txt TCGA-AC-A23C BRCA-AC-A23E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-AC-A23E.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-AC-A23E.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-AC-A23E-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A23E-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A23E-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23E-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-AC-A23E-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-AC-A23E-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-AC-A23E-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-AC-A23E-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-AC-A23E-01A-11D-A160-01.seg.txt TCGA-AC-A23E BRCA-AC-A23G-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-AC-A23G.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-AC-A23G.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.21.4.0/TCGA-AC-A23G-01A-11D-A212-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A23G-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A23G-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23G-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23G-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23G-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23G-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23G-01A-11R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-AC-A23G-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-AC-A23G-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-AC-A23G-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-AC-A23G-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-AC-A23G-01A-11D-A20R-01.seg.txt TCGA-AC-A23G BRCA-AC-A23H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-AC-A23H.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-AC-A23H.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-AC-A23H-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A23H-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A23H-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A23H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A23H-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-AC-A23H-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-AC-A23H-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-AC-A23H-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-AC-A23H-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-AC-A23H-01A-11D-A160-01.seg.txt TCGA-AC-A23H BRCA-AC-A2B8-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-AC-A2B8.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-AC-A2B8.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.17.4.0/TCGA-AC-A2B8-01A-11D-A17F-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2B8-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2B8-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2B8-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2B8-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2B8-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2B8-01A-11R-A17B-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.155.2002.0/TCGA-AC-A2B8-01A-11D-A17C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2B8-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2B8-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2B8-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2B8-01A-11D-A17C-01.seg.txt TCGA-AC-A2B8 BRCA-AC-A2BK-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-AC-A2BK.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2BK-01A-11R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-AC-A2BK-01A-11D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A2BK-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A2BK-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A2BK-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A2BK-01A-11D-A21P-01.seg.txt TCGA-AC-A2BK BRCA-AC-A2BM-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-AC-A2BM.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-AC-A2BM.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2BM-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2BM-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2BM-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2BM-01A-11R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-AC-A2BM-01A-11D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A2BM-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A2BM-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A2BM-01A-11D-A21P-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FB-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FB-01A-11R-A17B-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.155.2002.0/TCGA-AC-A2FB-01A-11D-A17C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FB-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FB-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FB-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FB-01A-11D-A17C-01.seg.txt TCGA-AC-A2FB BRCA-AC-A2FE-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A2FE.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-AC-A2FE-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FE-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FE-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.185.2002.0/TCGA-AC-A2FE-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2FE-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2FE-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2FE-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2FE-01A-11D-A19X-01.seg.txt TCGA-AC-A2FE-01 BRCA-AC-A2FF-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-AC-A2FF.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-AC-A2FF.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.17.4.0/TCGA-AC-A2FF-01A-11D-A17F-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FF-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FF-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FF-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FF-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FF-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FF-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FF-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FF-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FF-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FF-01A-11R-A17B-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.155.2002.0/TCGA-AC-A2FF-01A-11D-A17C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FF-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FF-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FF-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FF-01A-11D-A17C-01.seg.txt TCGA-AC-A2FF BRCA-AC-A2FG-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-AC-A2FG.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-AC-A2FG.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.17.4.0/TCGA-AC-A2FG-01A-11D-A17F-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FG-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FG-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FG-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FG-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FG-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FG-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FG-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FG-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FG-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FG-01A-11R-A17B-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.155.2002.0/TCGA-AC-A2FG-01A-11D-A17C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FG-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FG-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FG-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-AC-A2FG-01A-11D-A17C-01.seg.txt TCGA-AC-A2FG BRCA-AC-A2FK-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AC-A2FK.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AC-A2FK.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.18.4.0/TCGA-AC-A2FK-01A-12D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FK-01A-12R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FK-01A-12R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FK-01A-12R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FK-01A-12R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FK-01A-12R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FK-01A-12R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FK-01A-12R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FK-01A-12R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FK-01A-12R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FK-01A-12R-A180-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.167.2002.0/TCGA-AC-A2FK-01A-12D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AC-A2FK-01A-12D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AC-A2FK-01A-12D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AC-A2FK-01A-12D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AC-A2FK-01A-12D-A17U-01.seg.txt TCGA-AC-A2FK BRCA-AC-A2FM-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A2FM.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A2FM.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-AC-A2FM-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FM-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FM-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.185.2002.0/TCGA-AC-A2FM-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2FM-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2FM-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2FM-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2FM-01A-11D-A19X-01.seg.txt TCGA-AC-A2FM BRCA-AC-A2FO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AC-A2FO.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AC-A2FO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.18.4.0/TCGA-AC-A2FO-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FO-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2FO-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FO-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FO-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2FO-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FO-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FO-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FO-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FO-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2FO-01A-11R-A180-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.167.2002.0/TCGA-AC-A2FO-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AC-A2FO-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AC-A2FO-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AC-A2FO-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AC-A2FO-01A-11D-A17U-01.seg.txt TCGA-AC-A2FO BRCA-AC-A2QH-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AC-A2QH.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AC-A2QH.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-AC-A2QH-01B-04D-A22R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2QH-01B-04R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2QH-01B-04R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2QH-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2QH-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AC-A2QH-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2QH-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2QH-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2QH-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2QH-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A2QH-01A-11R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-AC-A2QH-01B-04D-A22Q-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AC-A2QH-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AC-A2QH-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AC-A2QH-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AC-A2QH-01A-11D-A18N-01.seg.txt TCGA-AC-A2QH BRCA-AC-A2QI-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A2QI.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A2QI.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-AC-A2QI-01A-12D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2QI-01A-12R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2QI-01A-12R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.185.2002.0/TCGA-AC-A2QI-01A-12D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2QI-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2QI-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2QI-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2QI-01A-12D-A19X-01.seg.txt TCGA-AC-A2QI BRCA-AC-A2QJ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A2QJ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A2QJ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-AC-A2QJ-01A-12D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2QJ-01A-12R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A2QJ-01A-12R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.185.2002.0/TCGA-AC-A2QJ-01A-12D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2QJ-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2QJ-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2QJ-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A2QJ-01A-12D-A19X-01.seg.txt TCGA-AC-A2QJ BRCA-AC-A3BB-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A3BB.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AC-A3BB.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-AC-A3BB-01A-21D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3BB-01A-21R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3BB-01A-21R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.185.2002.0/TCGA-AC-A3BB-01A-21D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A3BB-01A-21D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A3BB-01A-21D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A3BB-01A-21D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AC-A3BB-01A-21D-A19X-01.seg.txt TCGA-AC-A3BB BRCA-AC-A3EH-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-AC-A3EH.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-AC-A3EH-01A-22D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3EH-01A-22R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3EH-01A-22R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-AC-A3EH-01A-22D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3EH-01A-22D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3EH-01A-22D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3EH-01A-22D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3EH-01A-22D-A227-01.seg.txt TCGA-AC-A3EH-01 BRCA-AC-A3HN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-AC-A3HN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-AC-A3HN.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.21.4.0/TCGA-AC-A3HN-01A-11D-A212-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3HN-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3HN-01A-11R-A214-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3HN-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3HN-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3HN-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3HN-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3HN-01A-11R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-AC-A3HN-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-AC-A3HN-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-AC-A3HN-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-AC-A3HN-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-AC-A3HN-01A-11D-A20R-01.seg.txt TCGA-AC-A3HN BRCA-AC-A3OD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-AC-A3OD.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-AC-A3OD.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.4.0/TCGA-AC-A3OD-01B-06D-A22R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3OD-01B-06R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3OD-01B-06R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3OD-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3OD-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3OD-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3OD-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AC-A3OD-01A-11R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-AC-A3OD-01B-06D-A22Q-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A3OD-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A3OD-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A3OD-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-AC-A3OD-01A-11D-A21P-01.seg.txt TCGA-AC-A3OD BRCA-AC-A3QP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-AC-A3QP.clin.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3QP-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3QP-01A-11R-A22V-13.data.txt TP TCGA-AC-A3QP-01 BRCA-AC-A3QQ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-AC-A3QQ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-AC-A3QQ-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3QQ-01B-06R-A22P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3QQ-01B-06R-A22P-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-AC-A3QQ-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3QQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3QQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3QQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3QQ-01A-11D-A227-01.seg.txt TCGA-AC-A3QQ-01 BRCA-AC-A3TM-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-AC-A3TM.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-AC-A3TM-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3TM-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3TM-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-AC-A3TM-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3TM-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3TM-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3TM-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3TM-01A-11D-A227-01.seg.txt TCGA-AC-A3TM-01 BRCA-AC-A3TN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-AC-A3TN.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-AC-A3TN-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3TN-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3TN-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-AC-A3TN-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3TN-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3TN-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3TN-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3TN-01A-11D-A227-01.seg.txt TCGA-AC-A3TN-01 BRCA-AC-A3W5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-AC-A3W5.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-AC-A3W5-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3W5-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3W5-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-AC-A3W5-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W5-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W5-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W5-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W5-01A-11D-A227-01.seg.txt TCGA-AC-A3W5-01 BRCA-AC-A3W6-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-AC-A3W6.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-AC-A3W6-01A-12D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3W6-01A-12R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3W6-01A-12R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-AC-A3W6-01A-12D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W6-01A-12D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W6-01A-12D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W6-01A-12D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W6-01A-12D-A227-01.seg.txt TCGA-AC-A3W6-01 BRCA-AC-A3W7-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-AC-A3W7.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-AC-A3W7-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3W7-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AC-A3W7-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-AC-A3W7-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W7-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W7-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W7-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-AC-A3W7-01A-11D-A227-01.seg.txt TCGA-AC-A3W7-01 BRCA-AC-A3YI-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-AC-A3YI.clin.txt TP TCGA-AC-A3YI BRCA-AC-A3YJ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-AC-A3YJ.clin.txt TP TCGA-AC-A3YJ BRCA-AN-A03X-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AN-A03X.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AN-A03X.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-AN-A03X-01A-21D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AN-A03X-01A-21R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AN-A03X-01A-21R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03X-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03X-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03X-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03X-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03X-01A-21R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-AN-A03X-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A03X-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A03X-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A03X-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A03X-01A-21D-A011-01.seg.txt TCGA-AN-A03X-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A03X-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A03X-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AN-A03X-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AN-A03X-01A-21R-A00Z-07.data.txt BRCA-AN-A03Y-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AN-A03Y.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AN-A03Y.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-AN-A03Y-01A-21D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AN-A03Y-01A-21R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AN-A03Y-01A-21R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03Y-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03Y-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03Y-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03Y-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A03Y-01A-21R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-AN-A03Y-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A03Y-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A03Y-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A03Y-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A03Y-01A-21D-A011-01.seg.txt TCGA-AN-A03Y-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A03Y-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A03Y-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AN-A03Y-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AN-A03Y-01A-21R-A00Z-07.data.txt BRCA-AN-A041-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AN-A041.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AN-A041.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-AN-A041-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AN-A041-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AN-A041-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AN-A041-01A-31-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AN-A041-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AN-A041-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AN-A041-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A041-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A041-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A041-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A041-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A041-01A-11R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-AN-A041-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A041-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A041-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A041-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A041-01A-11D-A036-01.seg.txt TCGA-AN-A041-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A041-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A041-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AN-A041-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AN-A041-01A-11R-A034-07.data.txt BRCA-AN-A046-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AN-A046.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AN-A046.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AN-A046-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AN-A046-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A046-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A046-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A046-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A046-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A046-01A-21R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-AN-A046-01A-21D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A046-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A046-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A046-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A046-01A-21D-A036-01.seg.txt TCGA-AN-A046 /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AN-A046-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AN-A046-01A-21R-A034-07.data.txt BRCA-AN-A049-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AN-A049.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AN-A049.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-AN-A049-01A-21D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AN-A049-01A-21R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AN-A049-01A-21R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AN-A049-01A-31-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-AN-A049-01A-21D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A049-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A049-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A049-01A-21D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AN-A049-01A-21D-A011-01.seg.txt TCGA-AN-A049-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A049-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A049-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AN-A049-01A-21R-A00Z-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A04A-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A04A-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A04A-01A-21D-A036-01.seg.txt TCGA-AN-A04A-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A04A-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A04A-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AN-A04A-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AN-A04A-01A-21R-A034-07.data.txt BRCA-AN-A04C-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AN-A04C.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AN-A04C.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A04C-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A04C-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AN-A04C-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AN-A04C-01A-21R-A034-07.data.txt BRCA-AN-A04D-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A0FK-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A0FK-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A0FK-01A-11D-A036-01.seg.txt TCGA-AN-A0FK-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AN-A0FK-01.wig.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-AN-A0FL-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A0FL-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A0FL-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AN-A0FL-01A-11D-A036-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-AO-A03L-01A-41D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-AO-A03L-01A-41D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-AO-A03L-01A-41D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-AO-A03L-01A-41D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-AO-A03L-01A-41D-A059-01.seg.txt TCGA-AO-A03L-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03L-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03L-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-AO-A03L-01A-41R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-AO-A03L-01A-41R-A056-07.data.txt BRCA-AO-A03M-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A03M.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A03M.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-AO-A03M-01B-11D-A10N-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A03M-01B-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A03M-01B-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A03M-01B-11D-A10L-01.seg.txt TCGA-AO-A03M /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-AO-A03M-01B-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AO-A03M-01B-11R-A10J-07.data.txt BRCA-AO-A03N-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A03N.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A03N.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-AO-A03N-01B-11D-A10N-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03N-01B-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03N-01B-11R-A10J-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-AO-A03N-01B-11D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A03N-01B-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A03N-01B-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A03N-01B-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A03N-01B-11D-A10L-01.seg.txt TCGA-AO-A03N-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03N-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03N-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-AO-A03N-01B-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AO-A03N-01B-11R-A10J-07.data.txt BRCA-AO-A03O-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AO-A03O.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AO-A03O.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03O-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-AO-A03O-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AO-A03O-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AO-A03O-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AO-A03O-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AO-A03O-01A-11D-A011-01.seg.txt TCGA-AO-A03O-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03O-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03O-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AO-A03O-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AO-A03O-01A-11R-A00Z-07.data.txt BRCA-AO-A03P-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AO-A03P.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-AO-A03P.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-AO-A03P-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AO-A03P-01A-31-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-AO-A03P-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AO-A03P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AO-A03P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AO-A03P-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-AO-A03P-01A-11D-A011-01.seg.txt TCGA-AO-A03P-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03P-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03P-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AO-A03P-01A-11R-A00Z-07.data.txt BRCA-AO-A03R-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AO-A03R.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AO-A03R.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-AO-A03R-01A-21D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AO-A03R-01A-21R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AO-A03R-01A-21R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-AO-A03R-01A-21D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A03R-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A03R-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A03R-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A03R-01A-21D-A036-01.seg.txt TCGA-AO-A03R-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03R-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03R-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AO-A03R-01A-21R-A034-07.data.txt BRCA-AO-A03T-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AO-A03T.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AO-A03T.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-AO-A03T-01A-21D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AO-A03T-01A-21R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AO-A03T-01A-21R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-AO-A03T-01A-21D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A03T-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A03T-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A03T-01A-21D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A03T-01A-21D-A036-01.seg.txt TCGA-AO-A03T-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03T-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03T-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AO-A03T-01A-21R-A034-07.data.txt BRCA-AO-A03U-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A03U.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A03U.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-AO-A03U-01B-21D-A10N-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03V-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A03V-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-AO-A03V-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-AO-A03V-01A-11R-A115-07.data.txt BRCA-AO-A0J2-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-AO-A0J9-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A0J9-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A0J9-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AO-A0J9-01A-11D-A036-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A125-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A125-01A-11D-A10L-01.seg.txt TCGA-AO-A125-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A125-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A125-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-AO-A125-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AO-A125-01A-11R-A10J-07.data.txt BRCA-AO-A126-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A126.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A126.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-AO-A126-01A-11D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A126-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A126-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A126-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A126-01A-11D-A10L-01.seg.txt TCGA-AO-A126-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A126-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A126-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-AO-A126-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AO-A126-01A-11R-A10J-07.data.txt BRCA-AO-A128-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A128.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A128.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-AO-A128-01A-11D-A10N-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A128-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A128-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A128-01A-11D-A10L-01.seg.txt TCGA-AO-A128 /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-AO-A128-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AO-A128-01A-11R-A10J-07.data.txt BRCA-AO-A129-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A129.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A129.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-AO-A129-01A-21D-A10N-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12D-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12D-01A-11D-A111-01.seg.txt TCGA-AO-A12D-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A12D-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A12D-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-AO-A12D-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-AO-A12D-01A-11R-A115-07.data.txt BRCA-AO-A12E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A12E.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A12E.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-AO-A12E-01A-11D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A12E-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A12E-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A12E-01A-11D-A10L-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AO-A12E-01A-11R-A10J-07.data.txt BRCA-AO-A12F-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-AO-A12F.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-AO-A12F.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-AO-A12F-01A-11D-A112-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A12F-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A12F-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A12F-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-AO-A12F-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12F-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12F-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12F-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12F-01A-11D-A111-01.seg.txt TCGA-AO-A12F-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A12F-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A12F-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-AO-A12F-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-AO-A12F-01A-11R-A115-07.data.txt BRCA-AO-A12G-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A12G.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AO-A12G.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-AO-A12G-01A-11D-A10N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AO-A12G-01A-11R-A10I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AO-A12G-01A-11R-A10I-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A12G-01A-11R-A10J-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-AO-A12G-01A-11D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A12G-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A12G-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A12G-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AO-A12G-01A-11D-A10L-01.seg.txt TCGA-AO-A12G-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A12G-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A12G-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-AO-A12G-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AO-A12G-01A-11R-A10J-07.data.txt BRCA-AO-A12H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-AO-A12H.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-AO-A12H.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-AO-A12H-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12H-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12H-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12H-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AO-A12H-01A-11D-A111-01.seg.txt TCGA-AO-A12H-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A12H-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AO-A12H-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-AO-A12H-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-AO-A12H-01A-11R-A115-07.data.txt BRCA-AO-A1KO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AO-A1KO.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AO-A1KO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-AO-A1KO-01A-31D-A13K-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A1KO-01A-31R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A1KO-01A-31R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-AO-A1KO-01A-31D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KO-01A-31D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KO-01A-31D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KO-01A-31D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KO-01A-31D-A13J-01.seg.txt TCGA-AO-A1KO BRCA-AO-A1KP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AO-A1KP.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-AO-A1KP-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KP-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KP-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KP-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KP-01A-11D-A13J-01.seg.txt TCGA-AO-A1KP BRCA-AO-A1KQ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AO-A1KQ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AO-A1KQ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-AO-A1KQ-01A-11D-A13K-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-AO-A1KR-01A-12D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-AO-A1KR-01A-12D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-AO-A1KR-01A-12D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-AO-A1KR-01A-12D-A141-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A1KS-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AO-A1KS-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-AO-A1KS-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KS-01A-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-AO-A1KT-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KT-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KT-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KT-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AO-A1KT-01A-11D-A13J-01.seg.txt TCGA-AO-A1KT BRCA-AQ-A04H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AQ-A04H.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AQ-A04H.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-AQ-A04H-01B-11D-A10N-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04H-01B-11R-A10J-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-AQ-A04H-01B-11D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AQ-A04H-01B-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AQ-A04H-01B-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AQ-A04H-01B-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AQ-A04H-01B-11D-A10L-01.seg.txt TCGA-AQ-A04H-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AQ-A04H-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AQ-A04H-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-AQ-A04H-01B-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AQ-A04H-01B-11R-A10J-07.data.txt BRCA-AQ-A04J-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AQ-A04J.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-AQ-A04J.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-AQ-A04J-01A-02D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AQ-A04J-01A-02R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AQ-A04J-01A-02R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-AQ-A04J-01A-02D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AQ-A04J-01A-02D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AQ-A04J-01A-02D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AQ-A04J-01A-02D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-AQ-A04J-01A-02D-A036-01.seg.txt TCGA-AQ-A04J-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AQ-A04J-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AQ-A04J-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AQ-A04J-01A-02R-A034-07.data.txt BRCA-AQ-A04L-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AQ-A04L.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-AQ-A04L.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-AQ-A04L-01B-21D-A10N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AQ-A04L-01B-21R-A10I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AQ-A04L-01B-21R-A10I-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04L-01B-21R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04L-01B-21R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04L-01B-21R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04L-01B-21R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A04L-01B-21R-A10J-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-AQ-A04L-01B-21D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AQ-A04L-01B-21D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AQ-A04L-01B-21D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AQ-A04L-01B-21D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-AQ-A04L-01B-21D-A10L-01.seg.txt TCGA-AQ-A04L-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AQ-A04L-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AQ-A04L-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-AQ-A04L-01B-21R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-AQ-A04L-01B-21R-A10J-07.data.txt BRCA-AQ-A0Y5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-AQ-A0Y5.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-AQ-A0Y5.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.13.4.0/TCGA-AQ-A0Y5-01A-11D-A14N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AQ-A0Y5-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AQ-A0Y5-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A0Y5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A0Y5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A0Y5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A0Y5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A0Y5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A0Y5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A0Y5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A0Y5-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-AQ-A0Y5-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-AQ-A0Y5-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-AQ-A0Y5-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-AQ-A0Y5-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-AQ-A0Y5-01A-11D-A14J-01.seg.txt TCGA-AQ-A0Y5 BRCA-AQ-A1H2-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AQ-A1H2.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AQ-A1H2.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-AQ-A1H2-01A-11D-A13K-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AQ-A1H2-01A-11R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AQ-A1H2-01A-11R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A1H2-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A1H2-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A1H2-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H2-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H2-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H2-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H2-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H2-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-AQ-A1H2-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AQ-A1H2-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AQ-A1H2-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AQ-A1H2-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AQ-A1H2-01A-11D-A13J-01.seg.txt TCGA-AQ-A1H2 BRCA-AQ-A1H3-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AQ-A1H3.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-AQ-A1H3.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-AQ-A1H3-01A-31D-A13K-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AQ-A1H3-01A-31R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AQ-A1H3-01A-31R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A1H3-01A-31R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A1H3-01A-31R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AQ-A1H3-01A-31R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H3-01A-31R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H3-01A-31R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H3-01A-31R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H3-01A-31R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AQ-A1H3-01A-31R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-AQ-A1H3-01A-31D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AQ-A1H3-01A-31D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AQ-A1H3-01A-31D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AQ-A1H3-01A-31D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-AQ-A1H3-01A-31D-A13J-01.seg.txt TCGA-AQ-A1H3 BRCA-AR-A0TP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-AR-A0TP.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.72.2002.0/TCGA-AR-A0TV-01A-21D-A087-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-AR-A0TV-01A-21D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-AR-A0TV-01A-21D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-AR-A0TV-01A-21D-A087-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.3.0.0/TCGA-AR-A0TW-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.3.0.0/TCGA-AR-A0TW-01A-11R-A084-07.data.txt BRCA-AR-A0TX-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-AR-A0TX.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-AR-A0TX.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A0TY-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A0TY-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A0TY-01A-12R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-AR-A0TY-01A-12D-A111-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A0TY-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A0TY-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-AR-A0TY-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-AR-A0TY-01A-12R-A115-07.data.txt BRCA-AR-A0TZ-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-AR-A0U1-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AR-A0U1-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AR-A0U1-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-AR-A0U1-01A-11D-A111-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-AR-A1AH-01A-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-AR-A1AH-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-AR-A1AH-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-AR-A1AH-01A-11D-A12A-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-AR-A1AI-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AI-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AI-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AI-01A-11D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-AR-A1AJ-01A-21D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AJ-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AJ-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AJ-01A-21D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AL-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AL-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-AR-A1AL-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-AR-A1AL-01A-21R-A12P-07.data.txt BRCA-AR-A1AM-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-AR-A1AO-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AO-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AO-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AO-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AO-01A-11D-A12N-01.seg.txt TCGA-AR-A1AO-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AO-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AO-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-AR-A1AO-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-AR-A1AO-01A-11R-A12P-07.data.txt BRCA-AR-A1AP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-AR-A1AP.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-AR-A1AP.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-AR-A1AP-01A-11D-A12R-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-AR-A1AP-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AP-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AP-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AP-01A-11D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-AR-A1AP-01A-11R-A12P-07.data.txt BRCA-AR-A1AQ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-AR-A1AQ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-AR-A1AQ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-AR-A1AQ-01A-11D-A12R-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AQ-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AQ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-AR-A1AQ-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-AR-A1AQ-01A-11R-A12P-07.data.txt BRCA-AR-A1AR-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.103.2002.0/TCGA-AR-A1AR-01A-31D-A134-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-AR-A1AR-01A-31D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-AR-A1AR-01A-31D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-AR-A1AR-01A-31D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-AR-A1AR-01A-31D-A134-01.seg.txt TCGA-AR-A1AR-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AR-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AR-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-AR-A1AR-01A-31R-A137-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-AR-A1AS-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AS-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AS-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AS-01A-11D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-AR-A1AS-01A-11R-A12P-07.data.txt BRCA-AR-A1AT-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-AR-A1AT.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-AR-A1AT.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-AR-A1AT-01A-11D-A12R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A1AT-01A-11R-A12O-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A1AT-01A-11R-A12O-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AR-A1AT-01A-21-A13E-20.data.txt TP TCGA-AR-A1AT-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AT-01.wig.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A1AU-01A-11R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-AR-A1AU-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AU-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AU-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AU-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AU-01A-11D-A12N-01.seg.txt TCGA-AR-A1AU-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AU-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AU-01.maf.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-AR-A1AY-01A-21D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AY-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AY-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AY-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-AR-A1AY-01A-21D-A12N-01.seg.txt TCGA-AR-A1AY-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AY-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-AR-A1AY-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-AR-A1AY-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-AR-A1AY-01A-21R-A12P-07.data.txt BRCA-AR-A24H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24H.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24H.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A24H-01A-11D-A16A-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24K-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24K-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24K-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24K-01A-11D-A166-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24L-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24L-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24L-01A-11D-A166-01.seg.txt TCGA-AR-A24L BRCA-AR-A24M-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24M.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24M-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24M-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24M-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24M-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24M-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24M-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24M-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24M-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24M-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24M-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24M-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24M-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24M-01A-11D-A166-01.seg.txt TCGA-AR-A24M BRCA-AR-A24N-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24N.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24N.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A24N-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A24N-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A24N-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24N-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24N-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24N-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24N-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24N-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24N-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24N-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24N-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24N-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24N-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24N-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24N-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24N-01A-11D-A166-01.seg.txt TCGA-AR-A24N BRCA-AR-A24O-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24O.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24O-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24O-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24O-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24O-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24O-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24O-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24O-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24O-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24O-01A-11D-A166-01.seg.txt TCGA-AR-A24O BRCA-AR-A24P-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24P.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24P.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A24P-01A-11D-A16A-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24P-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24P-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24P-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24P-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24P-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24P-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24P-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24P-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24P-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24P-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24P-01A-11D-A166-01.seg.txt TCGA-AR-A24P BRCA-AR-A24Q-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24Q.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24Q-01A-12D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24Q-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24Q-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24Q-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24Q-01A-12D-A166-01.seg.txt TCGA-AR-A24Q BRCA-AR-A24R-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24R.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24R.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A24R-01A-11D-A16A-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24S-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24S-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24S-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24S-01A-11D-A166-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24T-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24T-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24T-01A-11D-A166-01.seg.txt TCGA-AR-A24T BRCA-AR-A24U-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24U.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24U-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24U-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24U-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24U-01A-11R-A169-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24U-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24U-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24U-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24U-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24U-01A-11D-A166-01.seg.txt TCGA-AR-A24U BRCA-AR-A24V-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24V.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24V.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A24V-01A-21D-A16A-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24V-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24V-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24V-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24V-01A-21R-A169-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24W-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24W-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24W-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24W-01A-11D-A166-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24X-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24X-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24X-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24X-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24X-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24X-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24X-01A-11D-A166-01.seg.txt TCGA-AR-A24X BRCA-AR-A24Z-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A24Z.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24Z-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24Z-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A24Z-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24Z-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24Z-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24Z-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24Z-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A24Z-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A24Z-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24Z-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24Z-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24Z-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A24Z-01A-11D-A166-01.seg.txt TCGA-AR-A24Z BRCA-AR-A250-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A250.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A250.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A250-01A-31D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A250-01A-31R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A250-01A-31R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A250-01A-31R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A250-01A-31R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A250-01A-31R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A250-01A-31R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A250-01A-31R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A250-01A-31R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A250-01A-31R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A250-01A-31R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A250-01A-31D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A250-01A-31D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A250-01A-31D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A250-01A-31D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A250-01A-31D-A166-01.seg.txt TCGA-AR-A250 BRCA-AR-A251-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A251.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A251-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A251-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A251-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A251-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A251-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A251-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A251-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A251-01A-12R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A251-01A-12D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A251-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A251-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A251-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A251-01A-12D-A166-01.seg.txt TCGA-AR-A251 BRCA-AR-A252-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A252.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A252.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A252-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A252-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A252-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A252-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A252-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A252-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A252-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A252-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A252-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A252-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A252-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A252-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A252-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A252-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A252-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A252-01A-11D-A166-01.seg.txt TCGA-AR-A252 BRCA-AR-A254-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A254.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A254.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A254-01A-21D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A254-01A-21R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A254-01A-21R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A254-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A254-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A254-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A254-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A254-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A254-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A254-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A254-01A-21R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A254-01A-21D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A254-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A254-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A254-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A254-01A-21D-A166-01.seg.txt TCGA-AR-A254 BRCA-AR-A255-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A255.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A255.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-AR-A255-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A255-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A255-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A255-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A255-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A255-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A255-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A255-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A255-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A255-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A255-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A255-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A255-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A255-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A255-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A255-01A-11D-A166-01.seg.txt TCGA-AR-A255 BRCA-AR-A256-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-AR-A256.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A256-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A256-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A256-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A256-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A256-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A256-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A256-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A256-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-AR-A256-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A256-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A256-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A256-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-AR-A256-01A-11D-A166-01.seg.txt TCGA-AR-A256 BRCA-AR-A2LE-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AR-A2LE.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AR-A2LE.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.18.4.0/TCGA-AR-A2LE-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LE-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LE-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LE-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LE-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LE-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LE-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LE-01A-11R-A180-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.167.2002.0/TCGA-AR-A2LE-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LE-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LE-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LE-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LE-01A-11D-A17U-01.seg.txt TCGA-AR-A2LE BRCA-AR-A2LH-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LH.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LH.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-AR-A2LH-01A-31D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LH-01A-31R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LH-01A-31R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LH-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LH-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LH-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LH-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LH-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LH-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LH-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LH-01A-31R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-AR-A2LH-01A-31D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LH-01A-31D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LH-01A-31D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LH-01A-31D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LH-01A-31D-A18N-01.seg.txt TCGA-AR-A2LH BRCA-AR-A2LJ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-AR-A2LJ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-AR-A2LJ-01A-12D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LJ-01A-12R-A19V-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AR-A2LJ-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-AR-A2LJ-01A-12D-A19X-01.seg.txt TCGA-AR-A2LJ-01 BRCA-AR-A2LK-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AR-A2LK.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AR-A2LK.clin.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AR-A2LL.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AR-A2LL.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.18.4.0/TCGA-AR-A2LL-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LL-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LL-01A-11R-A17X-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.167.2002.0/TCGA-AR-A2LL-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LL-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LL-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LL-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LL-01A-11D-A17U-01.seg.txt TCGA-AR-A2LL BRCA-AR-A2LM-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AR-A2LM.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-AR-A2LM.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.18.4.0/TCGA-AR-A2LM-01A-11D-A17Z-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LM-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LM-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LM-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LM-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LM-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LM-01A-11R-A180-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.167.2002.0/TCGA-AR-A2LM-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LM-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LM-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LM-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-AR-A2LM-01A-11D-A17U-01.seg.txt TCGA-AR-A2LM BRCA-AR-A2LN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LN.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-AR-A2LN-01A-21D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LN-01A-21R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LN-01A-21R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LN-01A-21R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LN-01A-21R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LN-01A-21R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LN-01A-21R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LN-01A-21R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LN-01A-21R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LN-01A-21R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LN-01A-21R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-AR-A2LN-01A-21D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LN-01A-21D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LN-01A-21D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LN-01A-21D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LN-01A-21D-A18N-01.seg.txt TCGA-AR-A2LN BRCA-AR-A2LO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LO.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-AR-A2LO-01A-31D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LO-01A-31R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LO-01A-31R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LO-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LO-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LO-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LO-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LO-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LO-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LO-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LO-01A-31R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-AR-A2LO-01A-31D-A19G-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LO-01A-31D-A19G-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LO-01A-31D-A19G-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LO-01A-31D-A19G-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LO-01A-31D-A19G-01.seg.txt TCGA-AR-A2LO BRCA-AR-A2LQ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LQ.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LQ-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LQ-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LQ-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LQ-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LQ-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LQ-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LQ-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LQ-01A-22R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-AR-A2LQ-01A-22D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LQ-01A-22D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LQ-01A-22D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LQ-01A-22D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LQ-01A-22D-A18N-01.seg.txt TCGA-AR-A2LQ BRCA-AR-A2LR-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LR.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-AR-A2LR.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-AR-A2LR-01A-12D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LR-01A-12R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-AR-A2LR-01A-12R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LR-01A-12R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LR-01A-12R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-AR-A2LR-01A-12R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LR-01A-12R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LR-01A-12R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LR-01A-12R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LR-01A-12R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-AR-A2LR-01A-12R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-AR-A2LR-01A-12D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-AR-A2LR-01A-12D-A18N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-B6-A0IE-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IE-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IE-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IE-01A-11D-A036-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IH-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IH-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-B6-A0IH-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-B6-A0IH-01A-11R-A115-07.data.txt BRCA-B6-A0IJ-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IJ-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IJ-01A-11D-A036-01.seg.txt TCGA-B6-A0IJ-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IJ-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IJ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-B6-A0IJ-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-B6-A0IJ-01A-11R-A034-07.data.txt BRCA-B6-A0IK-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-B6-A0IK.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-B6-A0IK.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IK-01A-12R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IK-01A-12R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IK-01A-12R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IK-01A-12R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-B6-A0IK-01A-12D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0IK-01A-12D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0IK-01A-12D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0IK-01A-12D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0IK-01A-12D-A059-01.seg.txt TCGA-B6-A0IK-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IK-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IK-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-B6-A0IK-01A-12R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-B6-A0IK-01A-12R-A056-07.data.txt BRCA-B6-A0IM-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IM.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IM.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-B6-A0IM-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-B6-A0IM-01A-11R-A035-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-B6-A0IM-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-B6-A0IM-01A-11R-A034-07.data.txt BRCA-B6-A0IN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IN.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IN-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IN-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IN-01A-11R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-B6-A0IN-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IN-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IN-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IN-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IN-01A-11D-A036-01.seg.txt TCGA-B6-A0IN-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IN-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IN-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-B6-A0IN-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-B6-A0IN-01A-11R-A034-07.data.txt BRCA-B6-A0IO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IO.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-B6-A0IO-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-B6-A0IO-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-B6-A0IO-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-B6-A0IO-01A-21-A13B-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-B6-A0IO-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IO-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IO-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IO-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IO-01A-11D-A036-01.seg.txt TCGA-B6-A0IO-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IO-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IO-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-B6-A0IO-01A-11R-A034-07.data.txt BRCA-B6-A0IP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IP.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IP.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-B6-A0IP-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-B6-A0IP-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-B6-A0IP-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A0IP-01A-11R-A034-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IP-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IP-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IP-01A-11R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-B6-A0IP-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IP-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IP-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IP-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IP-01A-11D-A036-01.seg.txt TCGA-B6-A0IP-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IP-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IP-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-B6-A0IP-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-B6-A0IP-01A-11R-A034-07.data.txt BRCA-B6-A0IQ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IQ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-B6-A0IQ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-B6-A0IQ-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-B6-A0IQ-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-B6-A0IQ-01A-11R-A035-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0IQ-01A-11R-A034-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-B6-A0IQ-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IQ-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IQ-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IQ-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-B6-A0IQ-01A-11D-A036-01.seg.txt TCGA-B6-A0IQ-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IQ-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0IQ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-B6-A0IQ-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-B6-A0IQ-01A-11R-A034-07.data.txt BRCA-B6-A0RE-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-B6-A0RE.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-B6-A0RE.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RE-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RE-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RE-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RE-01A-11D-A059-01.seg.txt TCGA-B6-A0RE-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0RE-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0RE-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-B6-A0RE-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-B6-A0RE-01A-11R-A056-07.data.txt BRCA-B6-A0RG-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RG-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RG-01A-11D-A059-01.seg.txt TCGA-B6-A0RG-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0RG-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0RG-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-B6-A0RG-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-B6-A0RG-01A-11R-A056-07.data.txt BRCA-B6-A0RH-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-B6-A0RH.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-B6-A0RH.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-B6-A0RH-01A-21D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-B6-A0RH-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-B6-A0RH-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-B6-A0RH-01A-21D-A111-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-B6-A0RH-01A-21R-A115-07.data.txt BRCA-B6-A0RI-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-B6-A0RI.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-B6-A0RI.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-B6-A0RI-01A-11D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0RI-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-B6-A0RI-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RI-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RI-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RI-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-B6-A0RI-01A-11D-A059-01.seg.txt TCGA-B6-A0RI-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0RI-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0RI-01.maf.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.72.2002.0/TCGA-B6-A0RL-01A-11D-A087-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-B6-A0RL-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-B6-A0RL-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-B6-A0RL-01A-11D-A087-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0RQ-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0RQ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-B6-A0RQ-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-B6-A0RQ-01A-11R-A115-07.data.txt BRCA-B6-A0RS-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.72.2002.0/TCGA-B6-A0RS-01A-11D-A087-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-B6-A0RS-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-B6-A0RS-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-B6-A0RS-01A-11D-A087-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.6.0.0/TCGA-B6-A0X5-01A-21R-A109-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.6.0.0/TCGA-B6-A0X5-01A-21R-A109-07.data.txt BRCA-B6-A0X7-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-B6-A0X7.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-B6-A0X7.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-B6-A0X7-01A-11D-A10L-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0X7-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-B6-A0X7-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-B6-A0X7-01A-11R-A10J-07.data.txt BRCA-B6-A1KC-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-B6-A1KC-01B-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-B6-A1KC-01B-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-B6-A1KC-01B-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-B6-A1KC-01B-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-B6-A1KC-01B-11D-A160-01.seg.txt TCGA-B6-A1KC BRCA-B6-A1KF-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-B6-A1KF.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-B6-A1KF.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-B6-A1KF-01A-11D-A13K-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-B6-A1KI.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-B6-A1KI.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.13.4.0/TCGA-B6-A1KI-01A-11D-A14N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-B6-A1KI-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-B6-A1KI-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KI-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KI-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KI-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KI-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KI-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-B6-A1KI-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-B6-A1KI-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-B6-A1KI-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-B6-A1KI-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-B6-A1KI-01A-11D-A14J-01.seg.txt TCGA-B6-A1KI BRCA-B6-A1KN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-B6-A1KN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-B6-A1KN.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-B6-A1KN-01A-11D-A13K-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-B6-A1KN-01A-11R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-B6-A1KN-01A-11R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A1KN-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A1KN-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-B6-A1KN-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KN-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KN-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KN-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KN-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A1KN-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-B6-A1KN-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-B6-A1KN-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-B6-A1KN-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-B6-A1KN-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-B6-A1KN-01A-11D-A13J-01.seg.txt TCGA-B6-A1KN BRCA-B6-A2IU-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-B6-A2IU.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-B6-A2IU.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-B6-A2IU-01A-32D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-B6-A2IU-01A-32R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-B6-A2IU-01A-32R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A2IU-01A-32R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A2IU-01A-32R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A2IU-01A-32R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A2IU-01A-32R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-B6-A2IU-01A-32R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-B6-A2IU-01A-32D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-B6-A2IU-01A-32D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-B6-A2IU-01A-32D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-B6-A2IU-01A-32D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-B6-A2IU-01A-32D-A18N-01.seg.txt TCGA-B6-A2IU BRCA-B6-A3ZX-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-B6-A3ZX.clin.txt TP TCGA-B6-A3ZX BRCA-B6-A400-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-B6-A400.clin.txt TP TCGA-B6-A400 BRCA-B6-A401-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-B6-A401.clin.txt TP TCGA-B6-A401 BRCA-B6-A402-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-B6-A402.clin.txt TP TCGA-B6-A402 BRCA-B6-A408-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-B6-A408.clin.txt TP TCGA-B6-A408 BRCA-B6-A409-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-B6-A409.clin.txt TP TCGA-B6-A409 BRCA-B6-A40B-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-B6-A40B.clin.txt TP TCGA-B6-A40B BRCA-B6-A40C-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-B6-A40C.clin.txt TP TCGA-B6-A40C BRCA-BH-A0AU-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0AU.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0AU.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-BH-A0AU-01A-11D-A12R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0AU-01A-11R-A12O-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0AU-01A-11R-A12O-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0AU-01A-21-A13C-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-BH-A0AU-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0AU-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0AU-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0AU-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0AU-01A-11D-A12N-01.seg.txt TCGA-BH-A0AU-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0AU-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0AU-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0AU-01A-11R-A12P-07.data.txt BRCA-BH-A0AV-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0AV.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0AV.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-BH-A0AV-01A-31D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0AV-01A-31R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0AV-01A-31R-A114-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-BH-A0AV-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0AV-01A-31R-A115-07.data.txt BRCA-BH-A0AW-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0AW.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0AW.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0AW-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0AW-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0AW-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0AW-01A-11D-A059-01.seg.txt TCGA-BH-A0AW-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0AW-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0AW-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0AW-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0AW-01A-11R-A056-07.data.txt BRCA-BH-A0AY-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-BH-A0AY.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-BH-A0AY.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-BH-A0AY-01A-21D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0AY-01A-21R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0AY-01A-21R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-BH-A0AY-01A-21R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-BH-A0AY-01A-21R-A00Z-07.data.txt BRCA-BH-A0AZ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0AZ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0AZ.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B0-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B0-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-BH-A0B0-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0B0-01A-21R-A115-07.data.txt BRCA-BH-A0B1-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0B1-01A-12D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B1-01A-12D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B1-01A-12D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B1-01A-12D-A059-01.seg.txt TCGA-BH-A0B1-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B1-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B1-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0B1-01A-12R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0B1-01A-12R-A056-07.data.txt BRCA-BH-A0B3-TP 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B3-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0B3-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B3-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B3-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B3-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B3-01A-11D-A059-01.seg.txt TCGA-BH-A0B3-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B3-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B3-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0B3-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0B3-01A-11R-A056-07.data.txt BRCA-BH-A0B4-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-BH-A0B4.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-BH-A0B4.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-BH-A0B4-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0B4-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0B4-01A-11R-A010-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0B4-01A-21-A13C-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B4-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B4-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B4-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B4-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B4-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-BH-A0B4-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-BH-A0B4-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-BH-A0B4-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-BH-A0B4-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-BH-A0B4-01A-11D-A011-01.seg.txt TCGA-BH-A0B4-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B4-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B4-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-BH-A0B4-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-BH-A0B4-01A-11R-A00Z-07.data.txt BRCA-BH-A0B5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0B5.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0B5.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-BH-A0B5-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0B5-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0B5-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0B5-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0B5-01A-11D-A12N-01.seg.txt TCGA-BH-A0B5-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B5-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B5-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0B5-01A-11R-A12P-07.data.txt BRCA-BH-A0B6-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-BH-A0B6.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-BH-A0B6.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-BH-A0B6-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0B6-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0B6-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.185.2002.0/TCGA-BH-A0B6-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-BH-A0B6-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-BH-A0B6-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-BH-A0B6-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-BH-A0B6-01A-11D-A19X-01.seg.txt TCGA-BH-A0B6 BRCA-BH-A0B7-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0B7.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0B7.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-BH-A0B7-01A-12D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0B7-01A-12R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0B7-01A-12R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0B7-01A-21-A13B-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-BH-A0B7-01A-12D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0B7-01A-12D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0B7-01A-12D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0B7-01A-12D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0B7-01A-12D-A111-01.seg.txt TCGA-BH-A0B7-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B7-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B7-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0B7-01A-12R-A115-07.data.txt BRCA-BH-A0B8-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0B8.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0B8.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0B8-01A-21D-A10P-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0B8-01A-21R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0B8-01A-21R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0B8-01A-21D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B8-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B8-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B8-01A-21D-A059-01.seg.txt TCGA-BH-A0B8-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B8-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B8-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0B8-01A-21R-A056-07.data.txt BRCA-BH-A0B9-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0B9.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0B9.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0B9-01A-11D-A10P-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0B9-01A-11R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0B9-01A-11R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0B9-01A-21-A13C-20.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0B9-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B9-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B9-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B9-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0B9-01A-11D-A059-01.seg.txt TCGA-BH-A0B9-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B9-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0B9-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0B9-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0B9-01A-11R-A056-07.data.txt BRCA-BH-A0BA-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0BA.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0BA.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0BA-01A-11D-A10P-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0BA-01A-11R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0BA-01A-11R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0BA-01A-21-A13C-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BA-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BA-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BA-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BA-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BA-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BA-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BA-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BA-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0BA-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BA-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BA-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BA-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BA-01A-11D-A059-01.seg.txt TCGA-BH-A0BA-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BA-01.wig.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.72.2002.0/TCGA-BH-A0BC-01A-22D-A087-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0BC-01A-22D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0BC-01A-22D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0BC-01A-22D-A087-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-BH-A0BF-01A-21D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BF-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BF-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BF-01A-21D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0BF-01A-21R-A12P-07.data.txt BRCA-BH-A0BG-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0BG.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0BG.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-BH-A0BG-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0BG-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0BG-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-BH-A0BG-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BG-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BG-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BG-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BG-01A-11D-A111-01.seg.txt TCGA-BH-A0BG-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BG-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BG-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0BG-01A-11R-A115-07.data.txt BRCA-BH-A0BJ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0BJ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0BJ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0BJ-01A-11D-A10P-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0BJ-01A-11R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0BJ-01A-11R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0BJ-01A-21-A13A-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0BJ-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BJ-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BJ-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BJ-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BJ-01A-11D-A059-01.seg.txt TCGA-BH-A0BJ-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BJ-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BJ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0BJ-01A-11R-A056-07.data.txt BRCA-BH-A0BL-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0BL.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0BL.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-BH-A0BL-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0BL-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0BL-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BL-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0BL-01A-11R-A115-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BL-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BL-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-BH-A0BL-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BL-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BL-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BL-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BL-01A-11D-A111-01.seg.txt TCGA-BH-A0BL-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BL-01.wig.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0BM-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BM-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BM-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0BM-01A-11D-A059-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BO-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BO-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0BO-01A-23R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0BO-01A-23R-A12D-07.data.txt BRCA-BH-A0BP-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-BH-A0BQ-01A-21D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BQ-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BQ-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0BQ-01A-21D-A111-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0BQ-01A-21R-A115-07.data.txt BRCA-BH-A0BR-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0BR.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0BR.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-BH-A0BR-01A-21D-A112-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BR-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BR-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-BH-A0BR-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0BR-01A-21R-A115-07.data.txt BRCA-BH-A0BS-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-BH-A0BT-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BT-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BT-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BT-01A-11D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BZ-01A-31R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BZ-01A-31R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0BZ-01A-31R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-BH-A0BZ-01A-31D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BZ-01A-31D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BZ-01A-31D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BZ-01A-31D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0BZ-01A-31D-A12N-01.seg.txt TCGA-BH-A0BZ-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BZ-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0BZ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0BZ-01A-31R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0BZ-01A-31R-A12P-07.data.txt BRCA-BH-A0C0-TP 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0C0-01A-21R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0C0-01A-21D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0C0-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0C0-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0C0-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0C0-01A-21D-A059-01.seg.txt TCGA-BH-A0C0-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0C0-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0C0-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0C0-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0C0-01A-21R-A056-07.data.txt BRCA-BH-A0C1-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A0C1.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A0C1.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-BH-A0C1-01B-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A0C1-01B-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A0C1-01B-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A0C1-01B-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A0C1-01B-11D-A12A-01.seg.txt TCGA-BH-A0C1-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0C1-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0C1-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0C1-01B-11R-A12D-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0C3-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0C3-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0C3-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0C3-01A-21R-A12P-07.data.txt BRCA-BH-A0C7-TP 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-BH-A0C7-01B-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0C7-01B-11R-A115-07.data.txt BRCA-BH-A0DD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0DD.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0DD.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-BH-A0DI-01A-21D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0DI-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0DI-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0DI-01A-21D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0DI-01A-21R-A12P-07.data.txt BRCA-BH-A0DK-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0DK.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0DK.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0DK-01A-21D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DK-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DK-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DK-01A-21D-A059-01.seg.txt TCGA-BH-A0DK-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DK-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DK-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0DK-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0DK-01A-21R-A056-07.data.txt BRCA-BH-A0DL-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0DL.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0DL.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-BH-A0DL-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0DL-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0DL-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0DL-01A-11D-A111-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0DO-01B-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0DO-01B-11R-A12D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-BH-A0DO-01B-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A0DO-01B-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A0DO-01B-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A0DO-01B-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A0DO-01B-11D-A12A-01.seg.txt TCGA-BH-A0DO-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DO-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DO-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0DO-01B-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0DO-01B-11R-A12D-07.data.txt BRCA-BH-A0DP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0DP.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0DP.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0DP-01A-21D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DP-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DP-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DP-01A-21D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DP-01A-21D-A059-01.seg.txt TCGA-BH-A0DP-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DP-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DP-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0DP-01A-21R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0DP-01A-21R-A056-07.data.txt BRCA-BH-A0DQ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0DQ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0DQ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.4.4.0/TCGA-BH-A0DQ-01A-11D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0DQ-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0DQ-01A-11D-A087-01.seg.txt TCGA-BH-A0DQ-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DQ-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DQ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.3.0.0/TCGA-BH-A0DQ-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.3.0.0/TCGA-BH-A0DQ-01A-11R-A084-07.data.txt BRCA-BH-A0DS-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0DS.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0DS.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0DS-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DS-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DS-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0DS-01A-11D-A059-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0DS-01A-11R-A056-07.data.txt BRCA-BH-A0DT-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A0DT.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A0DT.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.4.1.0/TCGA-BH-A0DT-01A-21D-A12E-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DT-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DT-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0DT-01A-21R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0DT-01A-21R-A12D-07.data.txt BRCA-BH-A0DV-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-BH-A0DX-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0DX-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0DX-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0DX-01A-11D-A111-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0DX-01A-11R-A115-07.data.txt BRCA-BH-A0DZ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-BH-A0DZ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.47.36.0/TCGA-BH-A0DZ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.1.1.0/TCGA-BH-A0DZ-01A-11D-A00Y-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0DZ-01A-11R-A010-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0DZ-01A-11R-A00Z-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0DZ-01A-11R-A00Z-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.47.2005.0/TCGA-BH-A0DZ-01A-11D-A011-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-BH-A0DZ-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-BH-A0DZ-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-BH-A0DZ-01A-11D-A011-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.47.2002.0/TCGA-BH-A0DZ-01A-11D-A011-01.seg.txt TCGA-BH-A0DZ-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0DZ-01.wig.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0E0-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0E0-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0E0-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0E0-01A-11D-A059-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0E0-01A-11R-A056-07.data.txt BRCA-BH-A0E1-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0E1.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0E1.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0E1-01A-11D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-BH-A0E9-01B-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0E9-01B-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0E9-01B-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0E9-01B-11D-A111-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0E9-01B-11R-A115-07.data.txt BRCA-BH-A0EA-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0EA.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0EA.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-BH-A0EA-01A-11D-A112-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0EA-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0EA-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-BH-A0EA-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0EA-01A-11R-A115-07.data.txt BRCA-BH-A0EB-TP 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0EB-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0EB-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-BH-A0EB-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-BH-A0EB-01A-11R-A034-07.data.txt BRCA-BH-A0EE-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0GZ-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0GZ-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0GZ-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0GZ-01A-11D-A059-01.seg.txt TCGA-BH-A0GZ-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0GZ-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0GZ-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0GZ-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0GZ-01A-11R-A056-07.data.txt BRCA-BH-A0H0-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0H0-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H0-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H0-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H0-01A-11D-A059-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0H0-01A-11R-A056-07.data.txt BRCA-BH-A0H3-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0H3.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0H3.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-BH-A0H3-01A-11D-A12R-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0H3-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0H3-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0H3-01A-11D-A12N-01.seg.txt TCGA-BH-A0H3-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0H3-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0H3-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0H3-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0H3-01A-11R-A12P-07.data.txt BRCA-BH-A0H5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0H5.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-BH-A0H5.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-BH-A0H5-01A-21D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0H5-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0H5-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-BH-A0H5-01A-21D-A111-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-BH-A0H5-01A-21R-A115-07.data.txt BRCA-BH-A0H6-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0H6.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0H6.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0H6-01A-21D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0H7-01A-13D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H7-01A-13D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H7-01A-13D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H7-01A-13D-A059-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0H7-01A-13R-A056-07.data.txt BRCA-BH-A0H9-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0H9.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0H9.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0H9-01A-11D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0H9-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0H9-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0H9-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H9-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H9-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H9-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0H9-01A-11D-A059-01.seg.txt TCGA-BH-A0H9-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0H9-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0H9-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0H9-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0H9-01A-11R-A056-07.data.txt BRCA-BH-A0HA-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0HA.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-BH-A0HA.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-BH-A0HA-01A-11D-A12R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0HA-01A-11R-A12O-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A0HA-01A-11R-A12O-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0HA-01A-21-A13C-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-BH-A0HA-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0HA-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0HA-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0HA-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-BH-A0HA-01A-11D-A12N-01.seg.txt TCGA-BH-A0HA-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HA-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HA-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A0HA-01A-11R-A12P-07.data.txt BRCA-BH-A0HB-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0HB.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0HB.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0HB-01A-11D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HB-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0HB-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HB-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HB-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HB-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HB-01A-11D-A059-01.seg.txt TCGA-BH-A0HB-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HB-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HB-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0HB-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0HB-01A-11R-A056-07.data.txt BRCA-BH-A0HF-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0HF.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0HF.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0HF-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HF-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HF-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HF-01A-11D-A059-01.seg.txt TCGA-BH-A0HF /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0HF-01A-11R-A056-07.data.txt BRCA-BH-A0HI-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0HI.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0HI.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.4.4.0/TCGA-BH-A0HI-01A-11D-A10P-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0HI-01A-11R-A085-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0HI-01A-11R-A085-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.72.2002.0/TCGA-BH-A0HI-01A-11D-A087-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0HI-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0HI-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0HI-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0HI-01A-11D-A087-01.seg.txt TCGA-BH-A0HI-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HI-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HI-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.3.0.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.3.0.0/TCGA-BH-A0HI-01A-11R-A084-07.data.txt BRCA-BH-A0HK-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0HK.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.61.29.0/TCGA-BH-A0HK.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.3.4.0/TCGA-BH-A0HK-01A-11D-A10P-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0HK-01A-11R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0HK-01A-11R-A057-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0HK-01A-21-A13C-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0HK-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HK-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HK-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HK-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HK-01A-11D-A059-01.seg.txt TCGA-BH-A0HK-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HK-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HK-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0HK-01A-11R-A056-07.data.txt BRCA-BH-A0HL-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-BH-A0HL.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.56.32.0/TCGA-BH-A0HL.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.2.1.0/TCGA-BH-A0HL-01A-11D-A032-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0HL-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0HL-01A-11R-A035-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0HL-01A-21-A13C-20.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-BH-A0HL-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-BH-A0HL-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-BH-A0HL-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-BH-A0HL-01A-11D-A036-01.seg.txt TCGA-BH-A0HL-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HL-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HL-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-BH-A0HL-01A-11R-A034-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-BH-A0HL-01A-11R-A034-07.data.txt BRCA-BH-A0HN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0HN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0HN.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.4.4.0/TCGA-BH-A0HN-01A-11D-A10P-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0HN-01A-11R-A085-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-BH-A0HN-01A-11R-A085-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A0HN-01A-21-A13C-20.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.72.2002.0/TCGA-BH-A0HN-01A-11D-A087-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0HN-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0HN-01A-11D-A087-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.72.2002.0/TCGA-BH-A0HN-01A-11D-A087-01.seg.txt TCGA-BH-A0HN-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HN-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HN-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.3.0.0/TCGA-BH-A0HN-01A-11R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.3.0.0/TCGA-BH-A0HN-01A-11R-A084-07.data.txt BRCA-BH-A0HO-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.56.2002.0/TCGA-BH-A0HO-01A-11D-A036-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-BH-A0HO-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-BH-A0HO-01A-11D-A036-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.56.2002.0/TCGA-BH-A0HO-01A-11D-A036-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-BH-A0HO-01A-11R-A034-07.data.txt BRCA-BH-A0HP-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0HP.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0HP.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.4.4.0/TCGA-BH-A0HP-01A-12D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.61.2006.0/TCGA-BH-A0HY-01A-11D-A059-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HY-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HY-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HY-01A-11D-A059-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.61.2006.0/TCGA-BH-A0HY-01A-11D-A059-01.seg.txt TCGA-BH-A0HY-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HY-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0HY-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-BH-A0HY-01A-11R-A056-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-BH-A0HY-01A-11R-A056-07.data.txt BRCA-BH-A0RX-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0RX.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.72.31.0/TCGA-BH-A0RX.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.4.4.0/TCGA-BH-A0RX-01A-21D-A10P-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0RX-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.3.0.0/TCGA-BH-A0RX-01A-21R-A084-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.3.0.0/TCGA-BH-A0RX-01A-21R-A084-07.data.txt BRCA-BH-A0W3-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.74.30.0/TCGA-BH-A0W3.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.74.30.0/TCGA-BH-A0W3.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0W3-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0W3-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.6.0.0/TCGA-BH-A0W3-01A-11R-A109-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.6.0.0/TCGA-BH-A0W3-01A-11R-A109-07.data.txt BRCA-BH-A0W4-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.74.2002.0/TCGA-BH-A0WA-01A-11D-A107-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.74.2002.0/TCGA-BH-A0WA-01A-11D-A107-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.74.2002.0/TCGA-BH-A0WA-01A-11D-A107-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.74.2002.0/TCGA-BH-A0WA-01A-11D-A107-01.seg.txt TCGA-BH-A0WA-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0WA-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A0WA-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.6.0.0/TCGA-BH-A0WA-01A-11R-A109-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.6.0.0/TCGA-BH-A0WA-01A-11R-A109-07.data.txt BRCA-BH-A18F-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18F-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18F-01A-11D-A12A-01.seg.txt TCGA-BH-A18F-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18F-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18F-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18F-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18F-01A-11R-A12D-07.data.txt BRCA-BH-A18G-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18G.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18G.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-BH-A18G-01A-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18G-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18G-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18G-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18G-01A-11D-A12A-01.seg.txt TCGA-BH-A18G /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18G-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18G-01A-11R-A12D-07.data.txt BRCA-BH-A18H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18H.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18K-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18K-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18K-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18K-01A-11D-A12A-01.seg.txt TCGA-BH-A18K-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18K-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18K-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18K-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18K-01A-11R-A12D-07.data.txt BRCA-BH-A18L-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18L.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18L.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.4.1.0/TCGA-BH-A18L-01A-32D-A12E-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A18L-01A-32R-A12C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A18L-01A-32R-A12C-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A18L-01A-21-A13F-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-BH-A18L-01A-32D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18L-01A-32D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18L-01A-32D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18L-01A-32D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18L-01A-32D-A12A-01.seg.txt TCGA-BH-A18L-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18L-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18L-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18L-01A-32R-A12D-07.data.txt BRCA-BH-A18M-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18M.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18M.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.4.1.0/TCGA-BH-A18M-01A-11D-A12E-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A18M-01A-11R-A12C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A18M-01A-11R-A12C-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BH-A18M-01A-21-A13E-20.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18M-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18M-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18M-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18M-01A-11R-A12D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-BH-A18M-01A-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18M-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18M-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18M-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18M-01A-11D-A12A-01.seg.txt TCGA-BH-A18M-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18M-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18M-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18M-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18M-01A-11R-A12D-07.data.txt BRCA-BH-A18N-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18N.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18N.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.4.1.0/TCGA-BH-A18N-01A-11D-A12E-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18N-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18N-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18N-01A-11R-A12D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-BH-A18N-01A-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18N-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18N-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18N-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18N-01A-11D-A12A-01.seg.txt TCGA-BH-A18N-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18N-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18N-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18N-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18N-01A-11R-A12D-07.data.txt BRCA-BH-A18P-TP 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18P-01A-11R-A12D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-BH-A18P-01A-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18P-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18P-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18P-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18P-01A-11D-A12A-01.seg.txt TCGA-BH-A18P-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18P-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18P-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18P-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18P-01A-11R-A12D-07.data.txt BRCA-BH-A18Q-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18Q.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18Q.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18Q-01A-12R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18Q-01A-12R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18Q-01A-12R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A18Q-01A-12R-A12D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-BH-A18Q-01A-12D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18Q-01A-12D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18Q-01A-12D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18Q-01A-12D-A12A-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18Q-01A-12R-A12D-07.data.txt BRCA-BH-A18R-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18R.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18R.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.4.1.0/TCGA-BH-A18R-01A-11D-A12E-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18R-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18R-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18R-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18R-01A-11R-A12D-07.data.txt BRCA-BH-A18S-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18S-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18S-01A-11D-A12A-01.seg.txt TCGA-BH-A18S-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18S-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18S-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18S-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18S-01A-11R-A12D-07.data.txt BRCA-BH-A18T-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18T.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-BH-A18T.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18U-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18U-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18U-01A-21R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18U-01A-21R-A12D-07.data.txt BRCA-BH-A18V-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18V-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-BH-A18V-01A-11D-A12A-01.seg.txt TCGA-BH-A18V-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18V-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A18V-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A18V-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A18V-01A-11R-A12D-07.data.txt BRCA-BH-A1EN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-BH-A1EN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-BH-A1EN.clin.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1EO.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1EO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.9.4.0/TCGA-BH-A1EO-01A-11D-A138-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1EO-01A-11R-A136-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1EO-01A-11R-A136-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.103.2002.0/TCGA-BH-A1EO-01A-11D-A134-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EO-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EO-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EO-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EO-01A-11D-A134-01.seg.txt TCGA-BH-A1EO-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1EO-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1EO-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A1EO-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A1EO-01A-11R-A137-07.data.txt BRCA-BH-A1ES-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1ES.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1ES.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.9.4.0/TCGA-BH-A1ES-01A-11D-A138-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1ES-01A-11R-A136-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1ES-01A-11R-A136-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ES-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ES-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ES-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ES-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ES-01A-11R-A137-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.103.2002.0/TCGA-BH-A1ES-01A-11D-A134-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1ES-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1ES-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1ES-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1ES-01A-11D-A134-01.seg.txt TCGA-BH-A1ES-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1ES-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1ES-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A1ES-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A1ES-01A-11R-A137-07.data.txt BRCA-BH-A1ET-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1ET.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1ET.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.9.4.0/TCGA-BH-A1ET-01A-11D-A138-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1ET-01A-11R-A136-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1ET-01A-11R-A136-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.103.2002.0/TCGA-BH-A1ET-01A-11D-A134-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1ET-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1ET-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1ET-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1ET-01A-11D-A134-01.seg.txt TCGA-BH-A1ET-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1ET-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1ET-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A1ET-01A-11R-A137-07.data.txt BRCA-BH-A1EU-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1EU.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1EU.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.9.4.0/TCGA-BH-A1EU-01A-11D-A138-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1EU-01A-11R-A136-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1EU-01A-11R-A136-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.103.2002.0/TCGA-BH-A1EU-01A-11D-A134-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EU-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EU-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EU-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EU-01A-11D-A134-01.seg.txt TCGA-BH-A1EU-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1EU-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1EU-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A1EU-01A-11R-A137-07.data.txt BRCA-BH-A1EV-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1EV.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-BH-A1EV.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1EV-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-BH-A1EV-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-BH-A1EV-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A1EV-01A-11R-A137-07.data.txt BRCA-BH-A1EW-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.103.2002.0/TCGA-BH-A1EW-01A-11D-A134-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EW-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EW-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-BH-A1EW-01A-11D-A134-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-BH-A1EW-01A-11R-A137-07.data.txt BRCA-BH-A1EX-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-BH-A1EX.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-BH-A1EX.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-BH-A1EX-01A-11D-A13K-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-BH-A1EY-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1EY-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1EY-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1EY-01A-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-BH-A1FJ-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1FJ-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1FJ-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1FJ-01A-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FR-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FR-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FR-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FR-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FR-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-BH-A1FR-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1FR-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1FR-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1FR-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-BH-A1FR-01A-11D-A13J-01.seg.txt TCGA-BH-A1FR BRCA-BH-A1FU-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-BH-A1FU.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-BH-A1FU.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-BH-A1FU-01A-11D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1FU-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A1FU-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1FU-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1FU-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A1FU-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FU-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FU-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FU-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FU-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A1FU-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-BH-A1FU-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-BH-A1FU-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-BH-A1FU-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-BH-A1FU-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-BH-A1FU-01A-11D-A14F-01.seg.txt TCGA-BH-A1FU BRCA-BH-A201-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-BH-A201.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-BH-A201.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.13.4.0/TCGA-BH-A201-01A-11D-A14N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A201-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A201-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A201-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A201-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A201-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A201-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A201-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A201-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A201-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A201-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-BH-A201-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-BH-A201-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-BH-A201-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-BH-A201-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-BH-A201-01A-11D-A14J-01.seg.txt TCGA-BH-A201 BRCA-BH-A202-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-BH-A202.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-BH-A202.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.13.4.0/TCGA-BH-A202-01A-11D-A14N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A202-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A202-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A202-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A202-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A202-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A202-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A202-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A202-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A202-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A202-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-BH-A202-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-BH-A202-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-BH-A202-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-BH-A202-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-BH-A202-01A-11D-A14J-01.seg.txt TCGA-BH-A202 BRCA-BH-A203-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-BH-A203.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-BH-A203.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-BH-A203-01A-12D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A203-01A-12R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A203-01A-12R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A203-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A203-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A203-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A203-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A203-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A203-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A203-01A-12R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A203-01A-12R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-BH-A203-01A-12D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-BH-A203-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-BH-A203-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-BH-A203-01A-12D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-BH-A203-01A-12D-A166-01.seg.txt TCGA-BH-A203 BRCA-BH-A204-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-BH-A204.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-BH-A204.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-BH-A204-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A204-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A204-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A204-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A204-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A204-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A204-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A204-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A204-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A204-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A204-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-BH-A204-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A204-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A204-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A204-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A204-01A-11D-A160-01.seg.txt TCGA-BH-A204 BRCA-BH-A208-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-BH-A208.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-BH-A208.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-BH-A208-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A208-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A208-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A208-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A208-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A208-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A208-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A208-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A208-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A208-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A208-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-BH-A208-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A208-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A208-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A208-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A208-01A-11D-A160-01.seg.txt TCGA-BH-A208 BRCA-BH-A209-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-BH-A209.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-BH-A209.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-BH-A209-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A209-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A209-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A209-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A209-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A209-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A209-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A209-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A209-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A209-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A209-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-BH-A209-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A209-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A209-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A209-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-BH-A209-01A-11D-A160-01.seg.txt TCGA-BH-A209 BRCA-BH-A28O-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-BH-A28O.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-BH-A28O.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-BH-A28O-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A28O-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A28O-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-BH-A28O-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-BH-A28O-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-BH-A28O-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-BH-A28O-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-BH-A28O-01A-11D-A227-01.seg.txt TCGA-BH-A28O BRCA-BH-A28Q-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-BH-A28Q.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-BH-A28Q.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-BH-A28Q-01A-11D-A16G-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A28Q-01A-11R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A28Q-01A-11R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A28Q-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A28Q-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-BH-A28Q-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A28Q-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A28Q-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A28Q-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A28Q-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A28Q-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-BH-A28Q-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-BH-A28Q-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-BH-A28Q-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-BH-A28Q-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-BH-A28Q-01A-11D-A16C-01.seg.txt TCGA-BH-A28Q BRCA-BH-A2L8-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-BH-A2L8.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-BH-A2L8-01A-11D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A2L8-01A-11R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-BH-A2L8-01A-11R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A2L8-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A2L8-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A2L8-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A2L8-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-BH-A2L8-01A-11R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-BH-A2L8-01A-11D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-BH-A2L8-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-BH-A2L8-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-BH-A2L8-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-BH-A2L8-01A-11D-A18N-01.seg.txt TCGA-BH-A2L8-01 BRCA-BH-A42T-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-BH-A42T.clin.txt TP TCGA-BH-A42T BRCA-BH-A42U-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-BH-A42U.clin.txt TP TCGA-BH-A42U BRCA-BH-A42V-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-BH-A42V.clin.txt TP TCGA-BH-A42V BRCA-C8-A12K-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12K.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12K.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A12K-01A-21D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12K-01A-21R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12K-01A-21R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A12K-01A-11-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A12K-01A-21D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12K-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12K-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12K-01A-21D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12K-01A-21D-A111-01.seg.txt TCGA-C8-A12K-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12K-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12K-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A12K-01A-21R-A115-07.data.txt BRCA-C8-A12L-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12L.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12L.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A12L-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12L-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12L-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A12L-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12L-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12L-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12L-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12L-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12L-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12L-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12L-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12L-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A12L-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12L-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12L-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12L-01A-11D-A111-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12M-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12M-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A12M-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A12M-01A-11R-A115-07.data.txt BRCA-C8-A12N-TP 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12O-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12O-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A12O-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A12O-01A-11R-A115-07.data.txt BRCA-C8-A12P-TP 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12T-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12T-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A12T-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A12T-01A-11R-A115-07.data.txt BRCA-C8-A12U-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12U-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12U-01A-11D-A111-01.seg.txt TCGA-C8-A12U-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12U-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12U-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A12U-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A12U-01A-11R-A115-07.data.txt BRCA-C8-A12V-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12V.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12V.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12W-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12W-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12W-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A12W-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12W-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12W-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12W-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12W-01A-11D-A111-01.seg.txt TCGA-C8-A12W-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12W-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12W-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A12W-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A12W-01A-11R-A115-07.data.txt BRCA-C8-A12X-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12X.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12X.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A12X-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12X-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12X-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A12X-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12X-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12X-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12X-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12X-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12X-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A12X-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12X-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12X-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12X-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12X-01A-11D-A111-01.seg.txt TCGA-C8-A12X-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12X-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12X-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A12X-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A12X-01A-11R-A115-07.data.txt BRCA-C8-A12Y-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-C8-A12Y.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-C8-A12Y.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.4.1.0/TCGA-C8-A12Y-01A-11D-A12E-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12Y-01A-11R-A12C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12Y-01A-11R-A12C-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A12Y-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-C8-A12Y-01A-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-C8-A12Y-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-C8-A12Y-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-C8-A12Y-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-C8-A12Y-01A-11D-A12A-01.seg.txt TCGA-C8-A12Y-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12Y-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12Y-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-C8-A12Y-01A-11R-A12D-07.data.txt BRCA-C8-A12Z-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12Z.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A12Z.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A12Z-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12Z-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A12Z-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A12Z-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A12Z-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12Z-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12Z-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12Z-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A12Z-01A-11D-A111-01.seg.txt TCGA-C8-A12Z-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12Z-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A12Z-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A12Z-01A-11R-A115-07.data.txt BRCA-C8-A130-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A130.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A130.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A130-01A-31D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A130-01A-31R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A130-01A-31R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A130-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A130-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A130-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A130-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A130-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A130-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A130-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A130-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A130-01A-31R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A130-01A-31D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A130-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A130-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A130-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A130-01A-31D-A111-01.seg.txt TCGA-C8-A130-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A130-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A130-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A130-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A130-01A-31R-A115-07.data.txt BRCA-C8-A131-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A131.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A131.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A131-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A131-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A131-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A131-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A131-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A131-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A131-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A131-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A131-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A131-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A131-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A131-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A131-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A131-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A131-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A131-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A131-01A-11D-A111-01.seg.txt TCGA-C8-A131-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A131-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A131-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A131-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A131-01A-11R-A115-07.data.txt BRCA-C8-A132-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A132.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A132.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A132-01A-31D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A132-01A-31R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A132-01A-31R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A132-01A-41-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A132-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A132-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A132-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A132-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A132-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A132-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A132-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A132-01A-31R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A132-01A-31D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A132-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A132-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A132-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A132-01A-31D-A111-01.seg.txt TCGA-C8-A132-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A132-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A132-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A132-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A132-01A-31R-A115-07.data.txt BRCA-C8-A133-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-C8-A133.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.93.27.0/TCGA-C8-A133.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.4.1.0/TCGA-C8-A133-01A-32D-A12E-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A133-01A-32R-A12C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A133-01A-32R-A12C-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A133-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-C8-A133-01A-32D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-C8-A133-01A-32D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-C8-A133-01A-32D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-C8-A133-01A-32D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-C8-A133-01A-32D-A12A-01.seg.txt TCGA-C8-A133-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A133-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A133-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-C8-A133-01A-32R-A12D-07.data.txt BRCA-C8-A134-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A134.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A134.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A134-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A134-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A134-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A134-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A134-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A134-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A134-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A134-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A134-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A134-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A134-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A134-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A134-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A134-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A134-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A134-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A134-01A-11D-A111-01.seg.txt TCGA-C8-A134-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A134-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A134-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A134-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A134-01A-11R-A115-07.data.txt BRCA-C8-A135-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A135.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A135.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A135-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A135-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A135-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A135-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A135-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A135-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A135-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A135-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A135-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A135-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A135-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A135-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A135-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A135-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A135-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A135-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A135-01A-11D-A111-01.seg.txt TCGA-C8-A135-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A135-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A135-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A135-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A135-01A-11R-A115-07.data.txt BRCA-C8-A137-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A137.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A137.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A137-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-C8-A137-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A137-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A137-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A137-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A137-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A137-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A137-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A137-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A137-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A137-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A137-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A137-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A137-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A137-01A-11D-A111-01.seg.txt TCGA-C8-A137-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A137-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A137-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A137-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A137-01A-11R-A115-07.data.txt BRCA-C8-A138-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A138.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-C8-A138.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-C8-A138-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A138-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A138-01A-11R-A114-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A138-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-C8-A138-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A138-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A138-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A138-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-C8-A138-01A-11D-A111-01.seg.txt TCGA-C8-A138-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A138-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A138-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-C8-A138-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-C8-A138-01A-11R-A115-07.data.txt BRCA-C8-A1HE-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-C8-A1HE.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-C8-A1HE.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A1HE-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A1HE-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HE-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HE-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HE-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HE-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HE-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-C8-A1HE-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HE-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HE-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HE-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HE-01A-11D-A13J-01.seg.txt TCGA-C8-A1HE BRCA-C8-A1HF-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-C8-A1HJ-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HJ-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HJ-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HJ-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HJ-01A-11D-A13J-01.seg.txt TCGA-C8-A1HJ BRCA-C8-A1HK-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-C8-A1HK.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-C8-A1HK.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-C8-A1HK-01A-21D-A13K-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.103.2002.0/TCGA-C8-A1HL-01A-11D-A134-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HL-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HL-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HL-01A-11D-A134-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-C8-A1HL-01A-11R-A137-07.data.txt BRCA-C8-A1HM-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-C8-A1HM.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-C8-A1HM.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.9.4.0/TCGA-C8-A1HM-01A-12D-A138-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HM-01A-12D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HM-01A-12D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HM-01A-12D-A134-01.seg.txt TCGA-C8-A1HM-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A1HM-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A1HM-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-C8-A1HM-01A-12R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-C8-A1HM-01A-12R-A137-07.data.txt BRCA-C8-A1HN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-C8-A1HN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.103.21.0/TCGA-C8-A1HN.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.103.2002.0/TCGA-C8-A1HN-01A-11D-A134-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HN-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HN-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HN-01A-11D-A134-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.103.2002.0/TCGA-C8-A1HN-01A-11D-A134-01.seg.txt TCGA-C8-A1HN-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A1HN-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-C8-A1HN-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-C8-A1HN-01A-11R-A137-07.data.txt BRCA-C8-A1HO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-C8-A1HO.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-C8-A1HO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-C8-A1HO-01A-11D-A13K-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A1HO-01A-11R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A1HO-01A-11R-A13P-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-C8-A1HO-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HO-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HO-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HO-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-C8-A1HO-01A-11D-A13J-01.seg.txt TCGA-C8-A1HO BRCA-C8-A26V-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-C8-A26V.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-C8-A26V.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-C8-A26V-01A-11D-A16G-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A26V-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A26V-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-C8-A26V-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A26V-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-C8-A26W-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A26W-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A26W-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A26W-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A273-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A273-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A273-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A273-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-C8-A273-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A273-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A273-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A273-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A273-01A-11D-A16C-01.seg.txt TCGA-C8-A273 BRCA-C8-A274-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-C8-A274.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-C8-A274.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-C8-A274-01A-11D-A16G-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A274-01A-11R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-C8-A274-01A-11R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A274-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A274-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-C8-A274-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A274-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A274-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A274-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A274-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A274-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-C8-A274-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A274-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-C8-A275-01A-21D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A275-01A-21D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A275-01A-21D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-C8-A275-01A-21D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A278-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A278-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-C8-A278-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-C8-A278-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-C8-A278-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-C8-A278-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-C8-A278-01A-11D-A166-01.seg.txt TCGA-C8-A278 BRCA-C8-A27A-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-C8-A27A.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A27A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A27A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A27A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A27A-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-C8-A27A-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-C8-A27A-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-C8-A27A-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-C8-A27A-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-C8-A27A-01A-11D-A166-01.seg.txt TCGA-C8-A27A BRCA-C8-A27B-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-C8-A27B.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-C8-A27B.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-C8-A27B-01A-11D-A16A-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-C8-A3M7-01A-12D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-C8-A3M7-01A-12D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-C8-A3M7-01A-12D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-C8-A3M7-01A-12D-A21P-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A3M8-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-C8-A3M8-01A-11R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-C8-A3M8-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-C8-A3M8-01A-11D-A20R-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A13Y-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-D8-A13Y-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A13Y-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A13Y-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A13Y-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A13Y-01A-11D-A111-01.seg.txt TCGA-D8-A13Y-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A13Y-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A13Y-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A13Y-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A13Y-01A-11R-A115-07.data.txt BRCA-D8-A13Z-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A13Z.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A13Z.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-D8-A13Z-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A13Z-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A13Z-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D8-A13Z-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-D8-A13Z-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A13Z-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A13Z-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A13Z-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A13Z-01A-11D-A111-01.seg.txt TCGA-D8-A13Z-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A13Z-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A13Z-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A13Z-01A-11R-A115-07.data.txt BRCA-D8-A140-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A140.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A140.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-D8-A140-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A140-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A140-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D8-A140-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A140-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A140-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A140-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A140-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A140-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A140-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A140-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A140-01A-11R-A115-07.data.txt TP TCGA-D8-A140-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A140-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A140-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A140-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A140-01A-11R-A115-07.data.txt BRCA-D8-A141-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A141.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A141.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A141-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A141-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A141-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A141-01A-11D-A111-01.seg.txt TCGA-D8-A141-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A141-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A141-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A141-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A141-01A-11R-A115-07.data.txt BRCA-D8-A142-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A142.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A142.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-D8-A142-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A142-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A142-01A-11R-A114-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A142-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A142-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A142-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A142-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A142-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-D8-A142-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A142-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A142-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A142-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A142-01A-11D-A111-01.seg.txt TCGA-D8-A142-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A142-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A142-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A142-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A142-01A-11R-A115-07.data.txt BRCA-D8-A143-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A143.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A143.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-D8-A143-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D8-A143-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A143-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A143-01A-11R-A115-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A143-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A143-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-D8-A143-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A143-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A143-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A143-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A143-01A-11D-A111-01.seg.txt TCGA-D8-A143-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A143-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A143-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A143-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A143-01A-11R-A115-07.data.txt BRCA-D8-A145-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A145.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A145.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A145-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A145-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A145-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A145-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-D8-A145-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A145-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A145-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A145-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A145-01A-11D-A111-01.seg.txt TCGA-D8-A145-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A145-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A145-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A145-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A145-01A-11R-A115-07.data.txt BRCA-D8-A146-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A146.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A146.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-D8-A146-01A-31D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A146-01A-31R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A146-01A-31R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D8-A146-01A-21-A13D-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A146-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A146-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A146-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A146-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A146-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A146-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A146-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A146-01A-31R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-D8-A146-01A-31D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A146-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A146-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A146-01A-31D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A146-01A-31D-A111-01.seg.txt TCGA-D8-A146 /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A146-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A146-01A-31R-A115-07.data.txt BRCA-D8-A147-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A147.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-D8-A147.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A147-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A147-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A147-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A147-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-D8-A147-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A147-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A147-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A147-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-D8-A147-01A-11D-A111-01.seg.txt TCGA-D8-A147-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A147-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-D8-A147-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-D8-A147-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-D8-A147-01A-11R-A115-07.data.txt BRCA-D8-A1J8-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-D8-A1J8.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-D8-A1J8.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-D8-A1J8-01A-11D-A13K-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1J8-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1J8-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-D8-A1J8-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1J8-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1J8-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1J8-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1J8-01A-11D-A13J-01.seg.txt TCGA-D8-A1J8 BRCA-D8-A1J9-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-D8-A1J9.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-D8-A1J9-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1J9-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1J9-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1J9-01A-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1JD-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1JD-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1JD-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1JD-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1JD-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1JD-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1JD-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1JD-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-D8-A1JD-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JD-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JD-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JD-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JD-01A-11D-A13J-01.seg.txt TCGA-D8-A1JD BRCA-D8-A1JE-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-D8-A1JE.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-D8-A1JE.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-D8-A1JE-01A-11D-A13K-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-D8-A1JF-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JF-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JF-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JF-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JF-01A-11D-A13J-01.seg.txt TCGA-D8-A1JF BRCA-D8-A1JG-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-D8-A1JG.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-D8-A1JG.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-D8-A1JG-01B-11D-A13K-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1JG-01B-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1JG-01B-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-D8-A1JG-01B-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JG-01B-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-D8-A1JL-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JL-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JL-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JL-01A-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-D8-A1JM-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JM-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JM-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-D8-A1JM-01A-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1X9-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1X9-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1X9-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1X9-01A-12R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-D8-A1X9-01A-12D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1X9-01A-12D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1X9-01A-12D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1X9-01A-12D-A160-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-D8-A1XB-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XB-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XB-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XB-01A-11D-A14F-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XC-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XC-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XC-01A-11D-A14F-01.seg.txt TCGA-D8-A1XC BRCA-D8-A1XD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-D8-A1XD.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XD-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XD-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XD-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XD-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XD-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XD-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XD-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XD-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-D8-A1XD-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XD-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XD-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XD-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XD-01A-11D-A14F-01.seg.txt TCGA-D8-A1XD BRCA-D8-A1XF-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-D8-A1XF.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-D8-A1XF.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-D8-A1XF-01A-11D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A1XF-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A1XF-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XF-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-D8-A1XF-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XF-01A-11D-A14F-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-D8-A1XG-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XG-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XG-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-D8-A1XG-01A-11D-A14F-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XJ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XJ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XJ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XJ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XJ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XJ-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-D8-A1XJ-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XJ-01A-11D-A14J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XK-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XK-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XK-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XK-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XK-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XK-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XK-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XK-01A-21R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-D8-A1XK-01A-21D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XK-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XK-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XK-01A-21D-A14J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XT-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XT-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-D8-A1XT-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XT-01A-11D-A14J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-D8-A1XW-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XW-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XW-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XW-01A-11D-A14J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XY-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XY-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XY-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XY-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XY-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XY-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-D8-A1XY-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XY-01A-11D-A14J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XZ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XZ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1XZ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XZ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XZ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XZ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XZ-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1XZ-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-D8-A1XZ-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XZ-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XZ-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1XZ-01A-11D-A14J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-D8-A1Y1-01A-21D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1Y1-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1Y1-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1Y1-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-D8-A1Y1-01A-21D-A14J-01.seg.txt TCGA-D8-A1Y1 BRCA-D8-A1Y2-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-D8-A1Y2.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-D8-A1Y2.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-D8-A1Y2-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A1Y2-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-D8-A1Y2-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1Y2-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1Y2-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1Y2-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y2-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y2-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y2-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y2-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y2-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-D8-A1Y2-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1Y2-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1Y2-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1Y2-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1Y2-01A-11D-A160-01.seg.txt TCGA-D8-A1Y2 BRCA-D8-A1Y3-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-D8-A1Y3.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1Y3-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1Y3-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A1Y3-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y3-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y3-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y3-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y3-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A1Y3-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-D8-A1Y3-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1Y3-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1Y3-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1Y3-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-D8-A1Y3-01A-11D-A160-01.seg.txt TCGA-D8-A1Y3 BRCA-D8-A27E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-D8-A27E.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-D8-A27E.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-D8-A27E-01A-11D-A16G-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A27E-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27E-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27E-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27E-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27E-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27E-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27E-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27E-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27E-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27E-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27E-01A-11D-A16C-01.seg.txt TCGA-D8-A27E BRCA-D8-A27F-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-D8-A27F.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A27F-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A27F-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A27F-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27F-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27F-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27F-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27F-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27F-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27F-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27F-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27F-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27F-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27G-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27G-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27G-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27G-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27H-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27H-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27H-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27H-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27K-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27K-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27K-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27K-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27K-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27K-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27K-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27K-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27K-01A-11D-A16C-01.seg.txt TCGA-D8-A27K BRCA-D8-A27L-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-D8-A27L.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-D8-A27L.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-D8-A27L-01A-11D-A16G-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-D8-A27L-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27L-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27L-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27L-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27L-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27L-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27L-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27L-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27M-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27M-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27M-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27M-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27P-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27P-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27P-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27P-01A-11D-A16C-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27W-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27W-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27W-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-D8-A27W-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-D8-A27W-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27W-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27W-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27W-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-D8-A27W-01A-11D-A16C-01.seg.txt TCGA-D8-A27W BRCA-D8-A3Z5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-D8-A3Z5.clin.txt TP TCGA-D8-A3Z5 BRCA-D8-A3Z6-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-D8-A3Z6.clin.txt TP TCGA-D8-A3Z6 BRCA-E2-A105-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-E2-A105.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-E2-A105-01A-11D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A105-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A105-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A105-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A105-01A-11D-A10L-01.seg.txt TCGA-E2-A105-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A105-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A105-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-E2-A105-01A-11R-A10J-07.data.txt BRCA-E2-A106-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-E2-A106.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-E2-A106.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.6.4.0/TCGA-E2-A106-01A-11D-A10N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-E2-A106-01A-11R-A10I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-E2-A106-01A-11R-A10I-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-E2-A106-01A-11D-A10L-01.birdseed.txt TCGA-E2-A106 /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-E2-A106-01A-11R-A10J-07.data.txt BRCA-E2-A107-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-E2-A107.clin.txt 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/xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-E2-A107-01A-21-A13D-20.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-E2-A107-01A-11D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A107-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A107-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A107-01A-11D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A107-01A-11D-A10L-01.seg.txt TCGA-E2-A107-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A107-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A107-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-E2-A107-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-E2-A107-01A-11R-A10J-07.data.txt BRCA-E2-A108-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-E2-A108.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.80.25.0/TCGA-E2-A108.clin.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.80.2002.0/TCGA-E2-A108-01A-13D-A10L-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A108-01A-13D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A108-01A-13D-A10L-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.80.2002.0/TCGA-E2-A108-01A-13D-A10L-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A10F-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A10F-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.5.0.0/TCGA-E2-A10F-01A-11R-A10J-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.5.0.0/TCGA-E2-A10F-01A-11R-A10J-07.data.txt BRCA-E2-A14N-TP 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A14O-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A14O-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-E2-A14O-01A-31R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-E2-A14O-01A-31R-A115-07.data.txt BRCA-E2-A14P-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.93.2002.0/TCGA-E2-A14S-01A-11D-A12A-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-E2-A14S-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-E2-A14S-01A-11D-A12A-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.93.2004.0/TCGA-E2-A14S-01A-11D-A12A-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-E2-A15E-01A-11R-A12D-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-E2-A15E-01A-11R-A12D-07.data.txt BRCA-E2-A15F-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-E2-A15F.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-E2-A15F.clin.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15F-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15F-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-E2-A15F-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-E2-A15F-01A-11R-A115-07.data.txt BRCA-E2-A15G-TP 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-E2-A15P-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-E2-A15P-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-E2-A15P-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-E2-A15P-01A-11D-A111-01.seg.txt TCGA-E2-A15P-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15P-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15P-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-E2-A15P-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-E2-A15P-01A-11R-A115-07.data.txt BRCA-E2-A15R-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-E2-A15R.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-E2-A15R.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-E2-A15R-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A15R-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A15R-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-E2-A15R-01A-21-A13E-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.85.2002.0/TCGA-E2-A15R-01A-11D-A111-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-E2-A15R-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-E2-A15R-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-E2-A15R-01A-11D-A111-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.85.2002.0/TCGA-E2-A15R-01A-11D-A111-01.seg.txt TCGA-E2-A15R-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15R-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15R-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-E2-A15R-01A-11R-A115-07.data.txt BRCA-E2-A15S-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-E2-A15S.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-E2-A15S.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-E2-A15S-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A15S-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A15S-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-E2-A15S-01A-21-A13E-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt TP TCGA-E2-A15S-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15S-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15S-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-E2-A15S-01A-11R-A115-07.data.txt BRCA-E2-A15T-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-E2-A15T.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.85.26.0/TCGA-E2-A15T.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation27.Level_3.3.1.0/TCGA-E2-A15T-01A-11D-A112-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A15T-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A15T-01A-11R-A114-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-E2-A15T-01A-21-A13E-20.data.txt TP TCGA-E2-A15T-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15T-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A15T-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.7.0.0/TCGA-E2-A15T-01A-11R-A115-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.7.0.0/TCGA-E2-A15T-01A-11R-A115-07.data.txt BRCA-E2-A1AZ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1AZ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1AZ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-E2-A1AZ-01A-11D-A12R-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1B4-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1B4-01A-11D-A12N-01.seg.txt TCGA-E2-A1B4-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A1B4-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A1B4-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-E2-A1B4-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-E2-A1B4-01A-11R-A12P-07.data.txt BRCA-E2-A1B5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1B5.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1B5.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-E2-A1B5-01A-21D-A12R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A1B5-01A-21R-A12O-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A1B5-01A-21R-A12O-13.data.txt /xchip/gdac_data/normalized/diced/brca/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_BRCA.MDA_RPPA_Core.Level_3.1.0.0/TCGA-E2-A1B5-01A-31-A13E-20.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-E2-A1B5-01A-21D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1B5-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1B5-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1B5-01A-21D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1B5-01A-21D-A12N-01.seg.txt TCGA-E2-A1B5-01 /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A1B5-01.wig.txt /xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A1B5-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-E2-A1B5-01A-21R-A12P-07.data.txt BRCA-E2-A1B6-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1B6.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1B6.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.8.4.0/TCGA-E2-A1B6-01A-31D-A12R-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A1B6-01A-31R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A1B6-01A-31R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-E2-A1B6-01A-31D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1B6-01A-31D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_BRCA.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-E2-A1B6-01.maf.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-E2-A1B6-01A-31R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-E2-A1B6-01A-31R-A12P-07.data.txt BRCA-E2-A1BC-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1BC.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1BC.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1BC-01A-11R-A12P-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.96.2002.0/TCGA-E2-A1BC-01A-11D-A12N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1BC-01A-11D-A12N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.96.2004.0/TCGA-E2-A1BC-01A-11D-A12N-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_2.8.0.0/TCGA-E2-A1BC-01A-11R-A12P-07.data.txt /xchip/gdac_data/normalized/diced/brca/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_BRCA.AgilentG4502A_07_3.Level_3.8.0.0/TCGA-E2-A1BC-01A-11R-A12P-07.data.txt BRCA-E2-A1BD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1BD.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.96.19.0/TCGA-E2-A1BD.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LG-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LG-01A-21R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-E2-A1LG-01A-21D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E2-A1LG-01A-21D-A14J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E2-A1LK-01A-21D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E2-A1LK-01A-21D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E2-A1LK-01A-21D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E2-A1LK-01A-21D-A14F-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LL-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LL-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-E2-A1LL-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E2-A1LL-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E2-A1LL-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E2-A1LL-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E2-A1LL-01A-11D-A141-01.seg.txt TCGA-E2-A1LL BRCA-E2-A1LS-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E2-A1LS.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A1LS-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A1LS-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E2-A1LS-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LS-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LS-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LS-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LS-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A1LS-01A-12R-A157-07.data.txt TP TCGA-E2-A1LS BRCA-E2-A2P5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-E2-A2P5.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-E2-A2P5.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-E2-A2P5-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A2P5-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A2P5-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.185.2002.0/TCGA-E2-A2P5-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-E2-A2P5-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-E2-A2P5-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-E2-A2P5-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-E2-A2P5-01A-11D-A19X-01.seg.txt TCGA-E2-A2P5 BRCA-E2-A2P6-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-E2-A2P6.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.185.13.0/TCGA-E2-A2P6.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.20.4.0/TCGA-E2-A2P6-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A2P6-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E2-A2P6-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.185.2002.0/TCGA-E2-A2P6-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-E2-A2P6-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-E2-A2P6-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-E2-A2P6-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.185.2002.0/TCGA-E2-A2P6-01A-11D-A19X-01.seg.txt TCGA-E2-A2P6 BRCA-E2-A3DX-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-E2-A3DX.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A3DX-01A-21R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A3DX-01A-21R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A3DX-01A-21R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A3DX-01A-21R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E2-A3DX-01A-21R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-E2-A3DX-01A-21D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-E2-A3DX-01A-21D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-E2-A3DX-01A-21D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-E2-A3DX-01A-21D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-E2-A3DX-01A-21D-A20R-01.seg.txt TCGA-E2-A3DX BRCA-E9-A1N3-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1N3.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1N3.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N3-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N3-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N3-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N3-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N3-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N3-01A-12R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N3-01A-12R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A1N3-01A-12D-A160-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-E9-A1N4.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-E9-A1N4.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.13.4.0/TCGA-E9-A1N4-01A-11D-A14N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1N4-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1N4-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N4-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N4-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N4-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N4-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N4-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N4-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N4-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N4-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-E9-A1N4-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1N4-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1N4-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1N4-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1N4-01A-11D-A14J-01.seg.txt TCGA-E9-A1N4 BRCA-E9-A1N5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1N5.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1N5.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1N5-01A-11D-A14H-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N5-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N5-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N5-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N5-01A-11R-A14D-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-E9-A1N6-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1N6-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1N6-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1N6-01A-11D-A141-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N8-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N8-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-E9-A1N8-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1N8-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1N8-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1N8-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1N8-01A-11D-A141-01.seg.txt TCGA-E9-A1N8 BRCA-E9-A1N9-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1N9.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1N9.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1N9-01A-11D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1N9-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1N9-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N9-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N9-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1N9-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N9-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N9-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N9-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N9-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1N9-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1N9-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1N9-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1N9-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1N9-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1N9-01A-11D-A14F-01.seg.txt TCGA-E9-A1N9 BRCA-E9-A1NA-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-E9-A1NA.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-E9-A1NA.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.11.4.0/TCGA-E9-A1NA-01A-11D-A145-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1NA-01A-11R-A143-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1NA-01A-11R-A143-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NA-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NA-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NA-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NA-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NA-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NA-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NA-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NA-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-E9-A1NA-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1NA-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1NA-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1NA-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1NA-01A-11D-A141-01.seg.txt TCGA-E9-A1NA BRCA-E9-A1NC-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1NC.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1NC.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A1NC-01A-12D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1NC-01A-12R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1NC-01A-12R-A156-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A1NC-01A-12D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1NC-01A-12D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1NC-01A-12D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1NC-01A-12D-A160-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1ND-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1ND-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1ND-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1ND-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1ND-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1ND-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-E9-A1ND-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1ND-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1ND-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1ND-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-E9-A1ND-01A-11D-A141-01.seg.txt TCGA-E9-A1ND BRCA-E9-A1NE-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-E9-A1NE.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NE-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NE-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NE-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NE-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NE-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NE-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NE-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NE-01A-21R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-E9-A1NE-01A-21D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1NE-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1NE-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1NE-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1NE-01A-21D-A14J-01.seg.txt TCGA-E9-A1NE BRCA-E9-A1NF-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1NF.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1NF.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1NF-01A-11D-A14H-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NF-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NF-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1NF-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NF-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NF-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NF-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NF-01A-11D-A14F-01.seg.txt TCGA-E9-A1NF BRCA-E9-A1NG-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-E9-A1NG.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NG-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NG-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NG-01A-21R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NG-01A-21R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-E9-A1NG-01A-21D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1NG-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1NG-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1NG-01A-21D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1NG-01A-21D-A14J-01.seg.txt TCGA-E9-A1NG BRCA-E9-A1NH-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1NH.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1NH.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1NH-01A-11D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1NH-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1NH-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NH-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NH-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NH-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NH-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NH-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NH-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NH-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NH-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1NH-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NH-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NH-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NH-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NH-01A-11D-A14F-01.seg.txt TCGA-E9-A1NH BRCA-E9-A1NI-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1NI.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NI-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NI-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1NI-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NI-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NI-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NI-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NI-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1NI-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1NI-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NI-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NI-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NI-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1NI-01A-11D-A14F-01.seg.txt TCGA-E9-A1NI BRCA-E9-A1QZ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A1QZ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A1QZ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-E9-A1QZ-01A-21D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1QZ-01A-21R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1QZ-01A-21R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1QZ-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1QZ-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1QZ-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1QZ-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1QZ-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1QZ-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1QZ-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1QZ-01A-21R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A1QZ-01A-21D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1QZ-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1QZ-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1QZ-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1QZ-01A-21D-A166-01.seg.txt TCGA-E9-A1QZ BRCA-E9-A1R0-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-E9-A1R0.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R0-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R0-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R0-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R0-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R0-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R0-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R0-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R0-01A-22R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-E9-A1R0-01A-22D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A1R0-01A-22D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A1R0-01A-22D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A1R0-01A-22D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A1R0-01A-22D-A16C-01.seg.txt TCGA-E9-A1R0 BRCA-E9-A1R2-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1R2.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1R2.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1R2-01A-11D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1R2-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1R2-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R2-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R2-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R2-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R2-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R2-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R2-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R2-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R2-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1R2-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R2-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R2-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R2-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R2-01A-11D-A14F-01.seg.txt TCGA-E9-A1R2 BRCA-E9-A1R3-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-E9-A1R3.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R3-01A-31R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R3-01A-31R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R3-01A-31R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R3-01A-31R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R3-01A-31R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R3-01A-31R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R3-01A-31R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R3-01A-31R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-E9-A1R3-01A-31D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R3-01A-31D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R3-01A-31D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R3-01A-31D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R3-01A-31D-A14J-01.seg.txt TCGA-E9-A1R3 BRCA-E9-A1R4-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1R4.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1R4.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1R4-01A-21D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1R4-01A-21R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1R4-01A-21R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R4-01A-21R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R4-01A-21R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R4-01A-21R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R4-01A-21R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R4-01A-21R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R4-01A-21R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R4-01A-21R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R4-01A-21R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1R4-01A-21D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R4-01A-21D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R4-01A-21D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R4-01A-21D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R4-01A-21D-A14F-01.seg.txt TCGA-E9-A1R4 BRCA-E9-A1R5-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-E9-A1R5.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R5-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R5-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-E9-A1R5-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R5-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R5-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R5-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R5-01A-11D-A14J-01.seg.txt TCGA-E9-A1R5 BRCA-E9-A1R6-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1R6.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1R6.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1R6-01A-11D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1R6-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1R6-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R6-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R6-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R6-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R6-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R6-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R6-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R6-01A-11R-A14D-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R6-01A-11R-A14D-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1R6-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R6-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R6-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R6-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1R6-01A-11D-A14F-01.seg.txt TCGA-E9-A1R6 BRCA-E9-A1R7-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-E9-A1R7.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-E9-A1R7.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.13.4.0/TCGA-E9-A1R7-01A-11D-A14N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1R7-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1R7-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R7-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R7-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1R7-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R7-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R7-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R7-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R7-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1R7-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-E9-A1R7-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R7-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R7-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R7-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-E9-A1R7-01A-11D-A14J-01.seg.txt TCGA-E9-A1R7 BRCA-E9-A1RA-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1RA.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1RA.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1RA-01A-11D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RA-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RA-01A-11R-A14C-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1RA-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1RA-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1RA-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1RA-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1RA-01A-11D-A14F-01.seg.txt TCGA-E9-A1RA BRCA-E9-A1RB-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RB.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RB-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RB-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RB-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RB-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RB-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RB-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RB-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RB-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A1RB-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RB-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RB-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RB-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RB-01A-11D-A160-01.seg.txt TCGA-E9-A1RB BRCA-E9-A1RC-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RC.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RC.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A1RC-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RC-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RC-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RC-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RC-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RC-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RC-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RC-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RC-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RC-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RC-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A1RC-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RC-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RC-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RC-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RC-01A-11D-A160-01.seg.txt TCGA-E9-A1RC BRCA-E9-A1RD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RD.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RD.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A1RD-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RD-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RD-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RD-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RD-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RD-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RD-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RD-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RD-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RD-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RD-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A1RD-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RD-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RD-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RD-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RD-01A-11D-A160-01.seg.txt TCGA-E9-A1RD BRCA-E9-A1RE-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RE.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RE.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A1RE-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RE-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RE-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RE-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RE-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RE-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RE-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RE-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RE-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RE-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RE-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A1RE-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RE-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RE-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RE-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RE-01A-11D-A160-01.seg.txt TCGA-E9-A1RE BRCA-E9-A1RF-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RF.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A1RF.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A1RF-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RF-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RF-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RF-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RF-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RF-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RF-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RF-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RF-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RF-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RF-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A1RF-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RF-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RF-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RF-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A1RF-01A-11D-A160-01.seg.txt TCGA-E9-A1RF BRCA-E9-A1RG-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1RG.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-E9-A1RG.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-E9-A1RG-01A-11D-A14H-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RG-01A-11R-A14C-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RG-01A-11R-A14C-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.120.2002.0/TCGA-E9-A1RG-01A-11D-A14F-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1RG-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1RG-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1RG-01A-11D-A14F-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.120.2002.0/TCGA-E9-A1RG-01A-11D-A14F-01.seg.txt TCGA-E9-A1RG BRCA-E9-A1RH-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A1RH.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A1RH.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-E9-A1RH-01A-21D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RH-01A-21R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RH-01A-21R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RH-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RH-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RH-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RH-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RH-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RH-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RH-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RH-01A-21R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A1RH-01A-21D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1RH-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1RH-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1RH-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1RH-01A-21D-A166-01.seg.txt TCGA-E9-A1RH BRCA-E9-A1RI-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A1RI.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A1RI.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-E9-A1RI-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RI-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A1RI-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RI-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RI-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A1RI-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RI-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RI-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RI-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RI-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A1RI-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A1RI-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1RI-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1RI-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1RI-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A1RI-01A-11D-A166-01.seg.txt TCGA-E9-A1RI BRCA-E9-A226-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A226.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A226.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A226-01A-21D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A226-01A-21R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A226-01A-21R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A226-01A-21R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A226-01A-21R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A226-01A-21R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A226-01A-21R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A226-01A-21R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A226-01A-21R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A226-01A-21R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A226-01A-21R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A226-01A-21D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A226-01A-21D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A226-01A-21D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A226-01A-21D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A226-01A-21D-A160-01.seg.txt TCGA-E9-A226 BRCA-E9-A227-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A227.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A227.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A227-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A227-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A227-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A227-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A227-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A227-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A227-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A227-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A227-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A227-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A227-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A227-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A227-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A227-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A227-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A227-01A-11D-A160-01.seg.txt TCGA-E9-A227 BRCA-E9-A228-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A228.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A228.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A228-01A-31D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A228-01A-31R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A228-01A-31R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A228-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A228-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A228-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A228-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A228-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A228-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A228-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A228-01A-31R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A228-01A-31D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A228-01A-31D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A228-01A-31D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A228-01A-31D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A228-01A-31D-A160-01.seg.txt TCGA-E9-A228 BRCA-E9-A229-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A229.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A229.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A229-01A-31D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A229-01A-31R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A229-01A-31R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A229-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A229-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A229-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A229-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A229-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A229-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A229-01A-31R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A229-01A-31R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A229-01A-31D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A229-01A-31D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A229-01A-31D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A229-01A-31D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A229-01A-31D-A160-01.seg.txt TCGA-E9-A229 BRCA-E9-A22A-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22A.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22A-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22A-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22A-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22A-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22A-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22A-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22A-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22A-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A22A-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22A-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22A-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22A-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22A-01A-11D-A160-01.seg.txt TCGA-E9-A22A BRCA-E9-A22B-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22B.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22B.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A22B-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22B-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22B-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22B-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22B-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22B-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22B-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22B-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22B-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22B-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22B-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A22B-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22B-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22B-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22B-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22B-01A-11D-A160-01.seg.txt TCGA-E9-A22B BRCA-E9-A22D-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22D.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22D.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A22D-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22D-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22D-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22D-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22D-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22D-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22D-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22D-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22D-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22D-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22D-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A22D-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22D-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22D-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22D-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22D-01A-11D-A160-01.seg.txt TCGA-E9-A22D BRCA-E9-A22E-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22E.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22E.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A22E-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22E-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22E-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22E-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22E-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A22E-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22E-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22E-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22E-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22E-01A-11D-A160-01.seg.txt TCGA-E9-A22E BRCA-E9-A22G-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22G.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22G.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A22G-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22G-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22G-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22G-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22G-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22G-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22G-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22G-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22G-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22G-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22G-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A22G-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22G-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22G-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22G-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22G-01A-11D-A160-01.seg.txt TCGA-E9-A22G BRCA-E9-A22H-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22H.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.136.18.0/TCGA-E9-A22H.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.14.4.0/TCGA-E9-A22H-01A-11D-A161-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22H-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A22H-01A-11R-A156-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A22H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22H-01A-11R-A157-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A22H-01A-11R-A157-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.136.2002.0/TCGA-E9-A22H-01A-11D-A160-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22H-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22H-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22H-01A-11D-A160-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.136.2002.0/TCGA-E9-A22H-01A-11D-A160-01.seg.txt TCGA-E9-A22H BRCA-E9-A243-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A243.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A243-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A243-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A243-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A243-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A243-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A243-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A243-01A-21R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A243-01A-21R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A243-01A-21D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A243-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A243-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A243-01A-21D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A243-01A-21D-A166-01.seg.txt TCGA-E9-A243 BRCA-E9-A244-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A244.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A244.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-E9-A244-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A244-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A244-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A244-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A244-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A244-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A244-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A244-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A244-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A244-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A244-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A244-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A244-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A244-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A244-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A244-01A-11D-A166-01.seg.txt TCGA-E9-A244 BRCA-E9-A245-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-E9-A245.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-E9-A245.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-E9-A245-01A-22D-A16G-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A245-01A-22R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A245-01A-22R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A245-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A245-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A245-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A245-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A245-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A245-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A245-01A-22R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A245-01A-22R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-E9-A245-01A-22D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A245-01A-22D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A245-01A-22D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A245-01A-22D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A245-01A-22D-A16C-01.seg.txt TCGA-E9-A245 BRCA-E9-A247-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A247.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A247.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-E9-A247-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A247-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A247-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A247-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A247-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A247-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A247-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A247-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A247-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A247-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A247-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A247-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A247-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A247-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A247-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A247-01A-11D-A166-01.seg.txt TCGA-E9-A247 BRCA-E9-A248-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A248.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A248-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A248-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A248-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A248-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A248-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A248-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A248-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A248-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A248-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A248-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A248-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A248-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A248-01A-11D-A166-01.seg.txt TCGA-E9-A248 BRCA-E9-A249-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A249.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A249.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.15.4.0/TCGA-E9-A249-01A-11D-A16A-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A249-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A249-01A-11R-A168-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A249-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A249-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A249-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A249-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A249-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A249-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A249-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A249-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A249-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A249-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A249-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A249-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A249-01A-11D-A166-01.seg.txt TCGA-E9-A249 BRCA-E9-A24A-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.142.17.0/TCGA-E9-A24A.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A24A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A24A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A24A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A24A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A24A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A24A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A24A-01A-11R-A169-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A24A-01A-11R-A169-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.142.2005.0/TCGA-E9-A24A-01A-11D-A166-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A24A-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A24A-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A24A-01A-11D-A166-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.142.2002.0/TCGA-E9-A24A-01A-11D-A166-01.seg.txt TCGA-E9-A24A BRCA-E9-A295-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-E9-A295.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-E9-A295.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-E9-A295-01A-11D-A16G-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A295-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A295-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A295-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A295-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A295-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A295-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-E9-A295-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A295-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A295-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A295-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-E9-A295-01A-11D-A16C-01.seg.txt TCGA-E9-A295 BRCA-E9-A2JS-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-E9-A2JS.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-E9-A2JS.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.18.4.0/TCGA-E9-A2JS-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A2JS-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A2JS-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A2JS-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A2JS-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-E9-A2JS-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JS-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JS-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JS-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JS-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JS-01A-11R-A180-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.167.2002.0/TCGA-E9-A2JS-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-E9-A2JS-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-E9-A2JS-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-E9-A2JS-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-E9-A2JS-01A-11D-A17U-01.seg.txt TCGA-E9-A2JS BRCA-E9-A2JT-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-E9-A2JT.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-E9-A2JT.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-E9-A2JT-01A-22D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A2JT-01A-22R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A2JT-01A-22R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JT-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JT-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JT-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JT-01A-22R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A2JT-01A-22R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-E9-A2JT-01A-22D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-E9-A2JT-01A-22D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-E9-A2JT-01A-22D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-E9-A2JT-01A-22D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-E9-A2JT-01A-22D-A18N-01.seg.txt TCGA-E9-A2JT BRCA-E9-A3HO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.202.11.0/TCGA-E9-A3HO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.21.4.0/TCGA-E9-A3HO-01A-11D-A212-05.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3HO-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3HO-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3HO-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3HO-01A-11R-A213-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3HO-01A-11R-A213-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.202.2002.0/TCGA-E9-A3HO-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-E9-A3HO-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-E9-A3HO-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-E9-A3HO-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.202.2002.0/TCGA-E9-A3HO-01A-11D-A20R-01.seg.txt TCGA-E9-A3HO-01 BRCA-E9-A3Q9-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-E9-A3Q9.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.4.0/TCGA-E9-A3Q9-01A-11D-A21R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A3Q9-01A-11R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A3Q9-01A-11R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3Q9-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3Q9-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3Q9-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3Q9-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-E9-A3Q9-01A-11R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-E9-A3Q9-01A-11D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-E9-A3Q9-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-E9-A3Q9-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-E9-A3Q9-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-E9-A3Q9-01A-11D-A21P-01.seg.txt TCGA-E9-A3Q9-01 BRCA-E9-A3QA-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-E9-A3QA.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-E9-A3QA-01A-61D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A3QA-01A-61R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-E9-A3QA-01A-61R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-E9-A3QA-01A-61D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-E9-A3QA-01A-61D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-E9-A3QA-01A-61D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-E9-A3QA-01A-61D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-E9-A3QA-01A-61D-A227-01.seg.txt TCGA-E9-A3QA-01 BRCA-E9-A3X8-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-E9-A3X8.clin.txt TP TCGA-E9-A3X8 BRCA-EW-A1IW-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-EW-A1IW.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-EW-A1IW.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-EW-A1IW-01A-11D-A13K-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1IW-01A-11R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1IW-01A-11R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IW-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IW-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IW-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IW-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IW-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IW-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IW-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IW-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-EW-A1IW-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IW-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IW-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IW-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IW-01A-11D-A13J-01.seg.txt TCGA-EW-A1IW BRCA-EW-A1IX-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1IX.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1IX.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.11.4.0/TCGA-EW-A1IX-01A-12D-A145-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1IX-01A-12R-A143-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1IX-01A-12R-A143-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IX-01A-12R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IX-01A-12R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IX-01A-12R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IX-01A-12R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IX-01A-12R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IX-01A-12R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IX-01A-12R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IX-01A-12R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1IX-01A-12D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1IX-01A-12D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1IX-01A-12D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1IX-01A-12D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1IX-01A-12D-A141-01.seg.txt TCGA-EW-A1IX BRCA-EW-A1IY-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-EW-A1IY.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IY-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IY-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1IY-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IY-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IY-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IY-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IY-01A-11R-A13Q-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1IY-01A-11R-A13Q-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-EW-A1IY-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IY-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IY-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IY-01A-11D-A13J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IY-01A-11D-A13J-01.seg.txt TCGA-EW-A1IY BRCA-EW-A1IZ-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-EW-A1IZ.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.109.30.0/TCGA-EW-A1IZ.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.10.4.0/TCGA-EW-A1IZ-01A-11D-A13K-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1IZ-01A-11R-A13P-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1IZ-01A-11R-A13P-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.109.2005.0/TCGA-EW-A1IZ-01A-11D-A13J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.109.2002.0/TCGA-EW-A1IZ-01A-11D-A13J-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1OY-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1OY-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1OY-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1OY-01A-11R-A144-07.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1P0-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P0-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P0-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P0-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P0-01A-11D-A141-01.seg.txt TCGA-EW-A1P0 BRCA-EW-A1P1-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-EW-A1P1.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.120.17.0/TCGA-EW-A1P1.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.12.4.0/TCGA-EW-A1P1-01A-31D-A14H-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1P3-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1P3-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1P3-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1P3-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1P3-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P3-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P3-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P3-01A-11D-A141-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1P5-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P5-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P5-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P5-01A-11D-A141-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1P7-01A-21D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P7-01A-21D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P7-01A-21D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P7-01A-21D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1P7-01A-21D-A141-01.seg.txt TCGA-EW-A1P7 BRCA-EW-A1P8-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1P8.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1P8.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.11.4.0/TCGA-EW-A1P8-01A-11D-A145-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PB-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PB-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1PB-01A-11D-A141-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-EW-A1PC.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-EW-A1PC.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.4.0/TCGA-EW-A1PC-01B-11D-A21R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1PC-01B-11R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1PC-01B-11R-A21U-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PC-01B-11R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-EW-A1PC-01B-11D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-EW-A1PC-01B-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-EW-A1PC-01B-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-EW-A1PC-01B-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-EW-A1PC-01B-11D-A21P-01.seg.txt TCGA-EW-A1PC BRCA-EW-A1PD-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1PD.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1PD.clin.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1PE.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1PE.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.11.4.0/TCGA-EW-A1PE-01A-11D-A145-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1PE-01A-11R-A143-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1PE-01A-11R-A143-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1PE-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PE-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PE-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PE-01A-11D-A141-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PF-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PF-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1PF-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PF-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PF-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PF-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PF-01A-11D-A141-01.seg.txt TCGA-EW-A1PF BRCA-EW-A1PG-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.117.21.0/TCGA-EW-A1PG.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1PG-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1PG-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1PG-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PG-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PG-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PG-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PG-01A-11R-A144-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PG-01A-11R-A144-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.117.2002.0/TCGA-EW-A1PG-01A-11D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PG-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PG-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PG-01A-11D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.117.2002.0/TCGA-EW-A1PG-01A-11D-A141-01.seg.txt TCGA-EW-A1PG BRCA-EW-A1PH-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-EW-A1PH.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.124.22.0/TCGA-EW-A1PH.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.13.4.0/TCGA-EW-A1PH-01A-11D-A14N-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1PH-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A1PH-01A-11R-A14L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1PH-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1PH-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A1PH-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PH-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PH-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PH-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PH-01A-11R-A14M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A1PH-01A-11R-A14M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.124.2002.0/TCGA-EW-A1PH-01A-11D-A14J-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-EW-A1PH-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-EW-A1PH-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-EW-A1PH-01A-11D-A14J-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.124.2002.0/TCGA-EW-A1PH-01A-11D-A14J-01.seg.txt TCGA-EW-A1PH BRCA-EW-A2FR-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-EW-A2FR.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-EW-A2FR.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.4.0/TCGA-EW-A2FR-01A-11D-A21R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A2FR-01A-11R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A2FR-01A-11R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FR-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FR-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FR-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FR-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FR-01A-11R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-EW-A2FR-01A-11D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-EW-A2FR-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-EW-A2FR-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-EW-A2FR-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-EW-A2FR-01A-11D-A21P-01.seg.txt TCGA-EW-A2FR BRCA-EW-A2FS-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-EW-A2FS.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-EW-A2FS.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.17.4.0/TCGA-EW-A2FS-01A-11D-A17F-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A2FS-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A2FS-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FS-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FS-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FS-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FS-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FS-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FS-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FS-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FS-01A-11R-A17B-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.155.2002.0/TCGA-EW-A2FS-01A-11D-A17C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FS-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FS-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FS-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FS-01A-11D-A17C-01.seg.txt TCGA-EW-A2FS BRCA-EW-A2FV-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-EW-A2FV.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-EW-A2FV.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.17.4.0/TCGA-EW-A2FV-01A-11D-A17F-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A2FV-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A2FV-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FV-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FV-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FV-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FV-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FV-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FV-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FV-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FV-01A-11R-A17B-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.155.2002.0/TCGA-EW-A2FV-01A-11D-A17C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FV-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FV-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FV-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FV-01A-11D-A17C-01.seg.txt TCGA-EW-A2FV BRCA-EW-A2FW-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-EW-A2FW.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.155.17.0/TCGA-EW-A2FW.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.17.4.0/TCGA-EW-A2FW-01A-11D-A17F-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A2FW-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A2FW-01A-11R-A17A-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FW-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FW-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-EW-A2FW-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FW-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FW-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FW-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FW-01A-11R-A17B-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-EW-A2FW-01A-11R-A17B-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.155.2002.0/TCGA-EW-A2FW-01A-11D-A17C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FW-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FW-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FW-01A-11D-A17C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.155.2002.0/TCGA-EW-A2FW-01A-11D-A17C-01.seg.txt TCGA-EW-A2FW BRCA-EW-A3E8-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-EW-A3E8.clin.txt TP TCGA-EW-A3E8 BRCA-EW-A3U0-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-EW-A3U0.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-EW-A3U0-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A3U0-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-EW-A3U0-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-EW-A3U0-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-EW-A3U0-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-EW-A3U0-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-EW-A3U0-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-EW-A3U0-01A-11D-A227-01.seg.txt TCGA-EW-A3U0-01 BRCA-EW-A423-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-EW-A423.clin.txt TP TCGA-EW-A423 BRCA-EW-A424-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-EW-A424.clin.txt TP TCGA-EW-A424 BRCA-GI-A2C8-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-GI-A2C8.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.147.17.0/TCGA-GI-A2C8.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.16.4.0/TCGA-GI-A2C8-01A-11D-A16G-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GI-A2C8-01A-11R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GI-A2C8-01A-11R-A16E-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-GI-A2C8-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-GI-A2C8-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_BRCA.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-GI-A2C8-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GI-A2C8-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GI-A2C8-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GI-A2C8-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GI-A2C8-01A-11R-A16F-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GI-A2C8-01A-11R-A16F-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.147.2002.0/TCGA-GI-A2C8-01A-11D-A16C-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-GI-A2C8-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-GI-A2C8-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-GI-A2C8-01A-11D-A16C-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.147.2002.0/TCGA-GI-A2C8-01A-11D-A16C-01.seg.txt TCGA-GI-A2C8 BRCA-GI-A2C9-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-GI-A2C9.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-GI-A2C9.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.4.0/TCGA-GI-A2C9-01A-11D-A21R-05.data.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DI-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DI-01A-31R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DI-01A-31R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-GM-A2DI-01A-31D-A18N-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-GM-A2DK.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-GM-A2DK.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.18.4.0/TCGA-GM-A2DK-01A-21D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A2DK-01A-21R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A2DK-01A-21R-A17X-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.167.2002.0/TCGA-GM-A2DK-01A-21D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DK-01A-21D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DK-01A-21D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DK-01A-21D-A17U-01.seg.txt 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/xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-GM-A2DM.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-GM-A2DM.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.18.4.0/TCGA-GM-A2DM-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A2DM-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A2DM-01A-11R-A17X-13.data.txt 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/xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DM-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DM-01A-11D-A17U-01.seg.txt TCGA-GM-A2DM BRCA-GM-A2DN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-GM-A2DN.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.167.17.0/TCGA-GM-A2DN.clin.txt 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/xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DN-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DN-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DN-01A-11R-A180-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DN-01A-11R-A180-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.167.2002.0/TCGA-GM-A2DN-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DN-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DN-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DN-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.167.2002.0/TCGA-GM-A2DN-01A-11D-A17U-01.seg.txt TCGA-GM-A2DN BRCA-GM-A2DO-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-GM-A2DO.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-GM-A2DO.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-GM-A2DO-01A-11D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A2DO-01A-11R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A2DO-01A-11R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DO-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DO-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DO-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DO-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A2DO-01A-11R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-GM-A2DO-01A-11D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-GM-A2DO-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-GM-A2DO-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-GM-A2DO-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-GM-A2DO-01A-11D-A18N-01.seg.txt TCGA-GM-A2DO BRCA-GM-A3NW-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-GM-A3NW.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.227.6.0/TCGA-GM-A3NW.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.23.4.0/TCGA-GM-A3NW-01A-21D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A3NW-01A-21R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A3NW-01A-21R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.227.2007.0/TCGA-GM-A3NW-01A-21D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-GM-A3NW-01A-21D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-GM-A3NW-01A-21D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-GM-A3NW-01A-21D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.227.2007.0/TCGA-GM-A3NW-01A-21D-A227-01.seg.txt TCGA-GM-A3NW BRCA-GM-A3NY-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-GM-A3NY.clin.txt /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_BRCA.bio.Level_1.216.7.0/TCGA-GM-A3NY.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.22.4.0/TCGA-GM-A3NY-01A-11D-A21R-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A3NY-01A-11R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A3NY-01A-11R-A21U-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A3NY-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A3NY-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A3NY-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A3NY-01A-11R-A21T-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-GM-A3NY-01A-11R-A21T-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.216.2005.0/TCGA-GM-A3NY-01A-11D-A21P-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-GM-A3NY-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-GM-A3NY-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-GM-A3NY-01A-11D-A21P-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.216.2003.0/TCGA-GM-A3NY-01A-11D-A21P-01.seg.txt TCGA-GM-A3NY BRCA-GM-A3XG-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-GM-A3XG.clin.txt TP TCGA-GM-A3XG BRCA-GM-A3XL-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-GM-A3XL.clin.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A3XL-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A3XL-01A-11R-A22V-13.data.txt TP TCGA-GM-A3XL-01 BRCA-GM-A3XN-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-GM-A3XN.clin.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A3XN-01A-12R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-GM-A3XN-01A-12R-A22V-13.data.txt TP TCGA-GM-A3XN-01 BRCA-HN-A2NL-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.177.17.0/TCGA-HN-A2NL.clin.txt /xchip/gdac_data/normalized/diced/brca/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_BRCA.HumanMethylation450.Level_3.19.4.0/TCGA-HN-A2NL-01A-11D-A18O-05.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-HN-A2NL-01A-11R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-HN-A2NL-01A-11R-A18L-13.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-HN-A2NL-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-HN-A2NL-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-HN-A2NL-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-HN-A2NL-01A-11R-A18M-07.data.txt /xchip/gdac_data/normalized/diced/brca/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_BRCA.IlluminaHiSeq_RNASeqV2.Level_3.1.2.0/TCGA-HN-A2NL-01A-11R-A18M-07.data.txt TP /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_2.177.2005.0/TCGA-HN-A2NL-01A-11D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-HN-A2NL-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-HN-A2NL-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-HN-A2NL-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/brca/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_BRCA.Genome_Wide_SNP_6.Level_3.177.2002.0/TCGA-HN-A2NL-01A-11D-A18N-01.seg.txt TCGA-HN-A2NL-01 BRCA-JL-A3YW-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.239.2.0/TCGA-JL-A3YW.clin.txt TP TCGA-JL-A3YW BRCA-JL-A3YX-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.234.3.0/TCGA-JL-A3YX.clin.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-JL-A3YX-01A-11R-A22V-13.data.txt /xchip/gdac_data/normalized/diced/brca/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_BRCA.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-JL-A3YX-01A-11R-A22V-13.data.txt TP TCGA-JL-A3YX-01 BRCA-LL-A440-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-LL-A440.clin.txt TP TCGA-LL-A440 BRCA-LL-A441-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-LL-A441.clin.txt TP TCGA-LL-A441 BRCA-LL-A442-TP /xchip/gdac_data/normalized/diced/brca/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_BRCA.bio.Level_1.255.0.0/TCGA-LL-A442.clin.txt TP TCGA-LL-A442 COAD-A6-2670-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-A6-2670.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-A6-2670.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.28.23.0/TCGA-A6-2670.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.28.23.0/TCGA-A6-2670.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.1.3.0/TCGA-A6-2670-01A-02D-0820-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-A6-2670-01A-02T-0822-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-A6-2670-01A-02T-0822-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-A6-2670-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2670-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2670-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2670-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2670-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2670-01A-02R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-A6-2670-01A-02D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-A6-2670-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-A6-2670-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-A6-2670-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-A6-2670-01A-02D-0819-01.seg.txt TCGA-A6-2670-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-A6-2670-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-A6-2670-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-A6-2670-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-A6-2670-01A-02R-0821-07.data.txt COAD-A6-2671-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-A6-2671.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-A6-2671.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-A6-2671.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-A6-2671.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-A6-2671.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-A6-2671.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-A6-2671-01A-01D-1405-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.1.4.0/TCGA-A6-2671-01A-01D-1407-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-A6-2671-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-A6-2671-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-2671-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2671-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2671-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2671-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2671-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2671-01A-01R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-A6-2671-01A-01D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-A6-2671-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-A6-2671-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-A6-2671-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-A6-2671-01A-01D-1549-01.seg.txt TCGA-A6-2671-01 COAD-A6-2672-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-A6-2672.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-A6-2672.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-A6-2672.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.29.23.0/TCGA-A6-2672.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.29.23.0/TCGA-A6-2672.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.29.23.0/TCGA-A6-2672.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.2.3.0/TCGA-A6-2672-01A-01D-0825-05.data.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.10.4.0/TCGA-A6-2672-01B-03D-2299-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-A6-2672-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-A6-2672-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-2672-01B-03R-2303-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-2672-01B-03R-2303-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-2672-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-A6-2672-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2672-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2672-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2672-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2672-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-2672-01A-01R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.29.2004.0/TCGA-A6-2672-01B-03D-2297-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-A6-2672-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-A6-2672-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-A6-2672-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-A6-2672-01A-01D-1549-01.seg.txt TCGA-A6-2672-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-A6-2672-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-A6-2672-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-A6-2672-01A-01R-0826-07.data.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.41.2002.0/TCGA-A6-3808-01A-01D-1018-01.birdseed.txt TCGA-A6-3808-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-A6-3808-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-A6-3808-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-A6-3808-01A-01R-1022-07.data.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-4105-01A-02D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-4105-01A-02D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-4105-01A-02D-1770-01.seg.txt TCGA-A6-4105-01 COAD-A6-4107-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-A6-4107.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-A6-4107.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-A6-4107.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-A6-4107.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-A6-4107.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-A6-4107.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.1.4.0/TCGA-A6-4107-01A-02D-1407-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-A6-4107-01A-02T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-A6-4107-01A-02T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-4107-01A-02R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-4107-01A-02R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-4107-01A-02R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-4107-01A-02R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-A6-4107-01A-02R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-A6-4107-01A-02D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-A6-4107-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-A6-4107-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-A6-4107-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-A6-4107-01A-02D-1549-01.seg.txt TCGA-A6-4107-01 COAD-A6-5656-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-5656.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-5656.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-5656.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-5656.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-5656.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-5656.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-A6-5656-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-5656-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-5656-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-5656-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-5656-01A-21D-1834-01.seg.txt TCGA-A6-5656-01 COAD-A6-5657-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5657.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5657.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5657.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-A6-5657.clin.txt 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/xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-5657-01A-21-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-A6-5657-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5657-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5657-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5657-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5657-01A-01D-1649-01.seg.txt TCGA-A6-5657-01 COAD-A6-5659-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5659.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5659.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5659.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5659-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5659-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5659-01A-01D-1649-01.seg.txt TCGA-A6-5659-01 COAD-A6-5660-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5660.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5660.clin.txt 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/xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5661.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5661.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5661.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-A6-5661.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-A6-5661.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-A6-5661.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-A6-5661-01B-05D-2297-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5661-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5661-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5661-01A-01D-1649-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-A6-5666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-A6-5666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-A6-5666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-A6-5666.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-A6-5666-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5666-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5666-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5666-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-A6-5666-01A-01D-1649-01.seg.txt TCGA-A6-5666-01 COAD-A6-5667-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-A6-5667.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-A6-5667.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-A6-5667.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-A6-5667.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-A6-5667.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-A6-5667.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-A6-5667-01A-21D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-5667-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-5667-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-5667-01A-11-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-A6-5667-01A-21D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-A6-5667-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-A6-5667-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-A6-5667-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-A6-5667-01A-21D-1717-01.seg.txt TCGA-A6-5667-01 COAD-A6-6137-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6137.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6137.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6137.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6137.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6137.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6137.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6137-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6137-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6137-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6137-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6137-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6137-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6137-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6137-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6137-01A-11D-1770-01.seg.txt TCGA-A6-6137-01 COAD-A6-6138-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6138.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6138.clin.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6138-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6138-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6138-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6138-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6138-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6138-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6138-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6138-01A-11D-1770-01.seg.txt TCGA-A6-6138-01 COAD-A6-6140-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6140.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6140.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6140.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6140.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6140.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6140.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6140-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6140-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6140-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6140-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6140-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6140-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6140-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6140-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6140-01A-11D-1770-01.seg.txt TCGA-A6-6140-01 COAD-A6-6141-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6141.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6141.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6141.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6141.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6141.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6141.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6141-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6141-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6141-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6141-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6141-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6141-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6141-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6141-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6141-01A-11D-1770-01.seg.txt TCGA-A6-6141-01 COAD-A6-6142-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6142.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6142.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6142.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6142.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6142.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6142.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6142-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6142-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6142-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6142-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6142-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6142-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6142-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6142-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6142-01A-11D-1770-01.seg.txt TCGA-A6-6142-01 COAD-A6-6648-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6648.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6648.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6648.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6648.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6648.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6648.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6648-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6648-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6648-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6648-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6648-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6648-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6648-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6648-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6648-01A-11D-1770-01.seg.txt TCGA-A6-6648-01 COAD-A6-6649-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6649.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6649.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6649.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6649.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6649.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6649.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6649-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6649-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6649-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6649-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6649-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6649-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6649-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6649-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6649-01A-11D-1770-01.seg.txt TCGA-A6-6649-01 COAD-A6-6650-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6650.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6650.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6650.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6650.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6650.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6650.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6650-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6650-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6650-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6650-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6650-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6650-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6650-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6650-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6650-01A-11D-1770-01.seg.txt TCGA-A6-6650-01 COAD-A6-6651-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6651.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6651.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6651.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6651.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6651.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6651.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-A6-6651-01A-21D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6651-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6651-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6651-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-A6-6651-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6651-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6651-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6651-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6651-01A-21D-1834-01.seg.txt TCGA-A6-6651-01 COAD-A6-6652-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6652.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6652.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6652.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6652.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6652.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6652.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6652-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6652-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6652-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6652-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6652-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6652-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6652-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6652-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6652-01A-11D-1770-01.seg.txt TCGA-A6-6652-01 COAD-A6-6653-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6653.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6653.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-A6-6653.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6653.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6653.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-A6-6653.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-A6-6653-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6653-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6653-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6653-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-A6-6653-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6653-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6653-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6653-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-A6-6653-01A-11D-1770-01.seg.txt TCGA-A6-6653-01 COAD-A6-6654-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6654.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6654.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6654.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6654.clin.txt 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/xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6654-01A-41-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-A6-6654-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6654-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6654-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6654-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6654-01A-21D-1834-01.seg.txt TCGA-A6-6654-01 COAD-A6-6780-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6780.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6780.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6780.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6780.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6780.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6780.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-A6-6780-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6780-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6780-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6780-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-A6-6780-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6780-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6780-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6780-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6780-01A-11D-1834-01.seg.txt TCGA-A6-6780-01 COAD-A6-6781-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-A6-6781.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-A6-6781.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-A6-6781.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-A6-6781.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-A6-6781.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-A6-6781.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-A6-6781-01A-22D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6781-01A-22H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6781-01A-22H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6781-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-A6-6781-01A-22D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-A6-6781-01A-22D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-A6-6781-01A-22D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-A6-6781-01A-22D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-A6-6781-01A-22D-1923-01.seg.txt TCGA-A6-6781-01 COAD-A6-6782-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6782.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6782.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-A6-6782.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6782.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6782.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-A6-6782.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-A6-6782-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6782-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-A6-6782-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-A6-6782-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-A6-6782-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6782-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6782-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6782-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-A6-6782-01A-11D-1834-01.seg.txt TCGA-A6-6782-01 COAD-AA-3488-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3488.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3488.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3488.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AA-3488.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3488-01A-01R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-AA-3488-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3488-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3488-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3488-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3488-01A-01D-1406-01.seg.txt TCGA-AA-3488-01 COAD-AA-3489-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AA-3489.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AA-3489.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AA-3489.clin.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3489-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AA-3489-01A-22-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AA-3489-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AA-3489-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AA-3489-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AA-3489-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AA-3489-01A-21D-1834-01.seg.txt TCGA-AA-3489-01 COAD-AA-3492-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3492.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3492.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3492-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3492-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3492-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3492-01A-01R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-AA-3492-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3492-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3492-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3492-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3492-01A-01D-1406-01.seg.txt TCGA-AA-3492-01 COAD-AA-3494-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3494.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3494.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3494.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AA-3494.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3506-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3506-01A-01D-1406-01.seg.txt TCGA-AA-3506-01 COAD-AA-3509-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3509.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3509.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3509.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AA-3509.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AA-3509.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AA-3509.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AA-3509-01A-01D-1405-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.1.4.0/TCGA-AA-3509-01A-01D-1407-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3509-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3509-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3509-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3509-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3509-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3509-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3509-01A-01R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-AA-3509-01A-01D-1406-01.birdseed.txt TCGA-AA-3509-01 COAD-AA-3510-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3510.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3510.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AA-3510.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AA-3510.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AA-3510.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AA-3510.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.1.4.0/TCGA-AA-3510-01A-01D-1407-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3510-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3510-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AA-3510-01A-21-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-AA-3510-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3510-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3510-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3510-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AA-3510-01A-01D-1406-01.seg.txt TCGA-AA-3510-01 COAD-AA-3511-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AA-3511.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AA-3511.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AA-3511.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AA-3511.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AA-3511.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AA-3511.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-AA-3511-01A-21D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3511-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3511-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AA-3511-01A-22-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AA-3511-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AA-3511-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AA-3511-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AA-3511-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AA-3511-01A-21D-1834-01.seg.txt TCGA-AA-3511-01 COAD-AA-3514-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3514.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3514.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3514.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.28.23.0/TCGA-AA-3514.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.28.23.0/TCGA-AA-3514.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.28.23.0/TCGA-AA-3514.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AA-3514-01A-02D-1547-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.1.3.0/TCGA-AA-3514-01A-02D-0820-05.data.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3514-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3514-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3514-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3514-01A-02R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3514-01A-02D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3514-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3514-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3514-01A-02D-1549-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3514-01A-02R-0821-07.data.txt COAD-AA-3516-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-AA-3516.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-AA-3516.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-AA-3516.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.29.23.0/TCGA-AA-3516.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3519-01A-02D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3519-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3519-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3519-01A-02D-1549-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3522-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3522-01A-01R-0821-07.data.txt COAD-AA-3524-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3524.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3524.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3524.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.29.2004.0/TCGA-AA-3525-01A-02D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-AA-3525-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-AA-3525-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-AA-3525-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-AA-3525-01A-02D-1549-01.seg.txt TCGA-AA-3525-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-3525-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-3525-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3525-01A-02R-0826-07.data.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3526-01A-02D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3526-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3526-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3526-01A-02D-1549-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3529-01A-02D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3529-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3529-01A-02D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3529-01A-02D-1549-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3534-01A-01D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3534-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3534-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3534-01A-01D-1549-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3534-01A-01R-0821-07.data.txt COAD-AA-3538-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.28.23.0/TCGA-AA-3538.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AA-3538-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3538-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3538-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3538-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3538-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3538-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3538-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3538-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3538-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3538-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3538-01A-01D-0819-01.seg.txt TCGA-AA-3538-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-3538-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-3538-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3538-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3538-01A-01R-0821-07.data.txt COAD-AA-3542-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3542.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3542.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.28.21.0/TCGA-AA-3542.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3542-01A-02R-1873-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3542-01A-02R-1873-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3542-01A-02D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3542-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3542-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3542-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3542-01A-02D-0819-01.seg.txt TCGA-AA-3542-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-3542-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-3542-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3542-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3542-01A-02R-0821-07.data.txt COAD-AA-3543-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-AA-3543.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-AA-3543.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.29.21.0/TCGA-AA-3543.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-AA-3543-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-AA-3543-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.29.2002.0/TCGA-AA-3543-01A-01D-0824-01.seg.txt TCGA-AA-3543-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-3543-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-3543-01.maf.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3555-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3555-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3555-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3555-01A-01D-0819-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.28.2002.0/TCGA-AA-3561-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3561-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3561-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.28.2002.0/TCGA-AA-3561-01A-01D-0819-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3655-01A-02D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3655-01A-02D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3655-01A-02D-1717-01.seg.txt TCGA-AA-3655-01 COAD-AA-3660-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3660.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3660.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3660.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3660.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3660.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3660.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AA-3660-01A-01D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3660-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3660-01A-01T-1722-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AA-3660-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3660-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3660-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3660-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3660-01A-01D-1717-01.seg.txt TCGA-AA-3660-01 COAD-AA-3662-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3662.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3662.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3662.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3662.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3662.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3662.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AA-3662-01A-01D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3662-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3662-01A-01T-1722-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AA-3662-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3662-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3662-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3662-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3662-01A-01D-1717-01.seg.txt TCGA-AA-3662-01 COAD-AA-3663-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3663.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3663.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3663.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3663.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3663.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3663.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AA-3663-01A-01D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3663-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3663-01A-01T-1722-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AA-3663-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3663-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3663-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3663-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3663-01A-01D-1717-01.seg.txt TCGA-AA-3663-01 COAD-AA-3664-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3664.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3664.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3664.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3664.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3664.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3664.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AA-3664-01A-01D-1167-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.5.3.0/TCGA-AA-3664-01A-01D-0904-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3664-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3664-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AA-3664-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AA-3664-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3664-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3664-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3664-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3664-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3664-01A-01R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.36.2002.0/TCGA-AA-3664-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3664-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3664-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3664-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3664-01A-01D-0903-01.seg.txt TCGA-AA-3664-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3664-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3664-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3664-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3664-01A-01R-0905-07.data.txt COAD-AA-3666-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3666.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3666.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AA-3666-01A-02D-1167-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.5.3.0/TCGA-AA-3666-01A-02D-0904-05.data.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3666-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3666-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3666-01A-02R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.36.2002.0/TCGA-AA-3666-01A-02D-0903-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3666-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3666-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3666-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3666-01A-02R-0905-07.data.txt COAD-AA-3667-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3667.clin.txt 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/xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3667-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3667-01A-01R-0905-07.data.txt COAD-AA-3672-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3672.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3672.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3672.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.36.2002.0/TCGA-AA-3672-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3672-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3672-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3672-01A-01D-0903-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3673-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3673-01A-01D-0903-01.seg.txt TCGA-AA-3673-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3673-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3673-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3673-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3673-01A-01R-0905-07.data.txt COAD-AA-3675-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3675.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3675.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3675.clin.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3675-01A-02T-0906-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.36.2002.0/TCGA-AA-3675-01A-02D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3675-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3675-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3675-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3675-01A-02D-0903-01.seg.txt TCGA-AA-3675-01 /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3675-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3675-01A-02R-0905-07.data.txt COAD-AA-3678-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3678.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3678.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3678.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3678.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3678.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3678.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3678-01A-01R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.36.2002.0/TCGA-AA-3678-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3678-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3678-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3678-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3678-01A-01D-0903-01.seg.txt TCGA-AA-3678-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3678-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3678-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3678-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3678-01A-01R-0905-07.data.txt COAD-AA-3679-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3679.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3679.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3679.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3679-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3679-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3679-01A-02D-0903-01.seg.txt TCGA-AA-3679-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3679-01.wig.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3685-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3685-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3685-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3685-01A-02R-0905-07.data.txt COAD-AA-3688-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3688.clin.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3688-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3688-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3688-01A-01R-0905-07.data.txt COAD-AA-3692-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3692.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3692.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3693-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3693-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3693-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3693-01A-01D-0903-01.seg.txt TCGA-AA-3693-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3693-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3693-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3693-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3693-01A-01R-0905-07.data.txt COAD-AA-3695-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3695.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0/TCGA-AA-3695-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0/TCGA-AA-3695-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.3.2.0/TCGA-AA-3695-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3695-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3695-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3695-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3695-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3695-01A-01R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.36.2002.0/TCGA-AA-3695-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3695-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3695-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3695-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3695-01A-01D-0903-01.seg.txt TCGA-AA-3695-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3695-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3695-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3695-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3695-01A-01R-0905-07.data.txt COAD-AA-3696-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3696.clin.txt 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/xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3696-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3696-01A-01R-0905-07.data.txt COAD-AA-3697-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3697.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3697.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3697.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3697.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3697.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3697.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AA-3697-01A-01D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3697-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3697-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AA-3697-01A-21-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AA-3697-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3697-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3697-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3697-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3697-01A-01D-1717-01.seg.txt TCGA-AA-3697-01 COAD-AA-3710-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.41.20.0/TCGA-AA-3710.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.41.20.0/TCGA-AA-3710.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.41.20.0/TCGA-AA-3710.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.41.22.0/TCGA-AA-3710.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.41.22.0/TCGA-AA-3710.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.41.22.0/TCGA-AA-3710.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.6.3.0/TCGA-AA-3710-01A-01D-1020-05.data.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3710-01A-01R-1022-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3710-01A-01R-1022-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3710-01A-01R-1022-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3710-01A-01R-1022-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.41.2002.0/TCGA-AA-3710-01A-01D-1018-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3710-01A-01D-1018-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3710-01A-01D-1018-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3710-01A-01D-1018-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3710-01A-01D-1018-01.seg.txt TCGA-AA-3710-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3710-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3710-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3710-01A-01R-1022-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3710-01A-01R-1022-07.data.txt COAD-AA-3712-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3712.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3712.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3712.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3712.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3712.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3712.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AA-3712-01A-21D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3712-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3712-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AA-3712-01A-22-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AA-3712-01A-21D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3712-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3712-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3712-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3712-01A-21D-1717-01.seg.txt TCGA-AA-3712-01 COAD-AA-3713-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3713.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3713.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AA-3713.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3713.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3713.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AA-3713.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AA-3713-01A-21D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3713-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AA-3713-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AA-3713-01A-22-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AA-3713-01A-21D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3713-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3713-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3713-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AA-3713-01A-21D-1717-01.seg.txt TCGA-AA-3713-01 COAD-AA-3715-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.36.24.0/TCGA-AA-3715.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AA-3715-01A-01D-0957-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.5.3.0/TCGA-AA-3715-01A-01D-0904-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3715-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-3715-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AA-3715-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AA-3715-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3715-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3715-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3715-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3715-01A-01R-0905-07.data.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3815-01A-01R-1022-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-3815-01A-01R-1022-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.41.2002.0/TCGA-AA-3815-01A-01D-1018-01.birdseed.txt TCGA-AA-3815-01 /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3815-01A-01R-1022-07.data.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3818-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3818-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3818-01A-01D-0903-01.seg.txt TCGA-AA-3818-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3818-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3818-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3818-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3818-01A-01R-0905-07.data.txt COAD-AA-3819-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3819.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.36.22.0/TCGA-AA-3819.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.36.2002.0/TCGA-AA-3819-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3819-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3819-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3819-01A-01D-0903-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.36.2002.0/TCGA-AA-3837-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3837-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3837-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.36.2002.0/TCGA-AA-3837-01A-01D-0903-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3875-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3875-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3875-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3875-01A-01R-0905-07.data.txt COAD-AA-3877-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.41.20.0/TCGA-AA-3877.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.41.2002.0/TCGA-AA-3930-01A-01D-1018-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3930-01A-01D-1018-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3930-01A-01D-1018-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3930-01A-01D-1018-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3949-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3949-01A-01R-1022-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-3949-01A-01R-1022-07.data.txt COAD-AA-3950-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.41.20.0/TCGA-AA-3950.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.41.20.0/TCGA-AA-3950.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.41.2002.0/TCGA-AA-3950-01A-02D-1018-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3950-01A-02D-1018-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3950-01A-02D-1018-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.41.2002.0/TCGA-AA-3950-01A-02D-1018-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.41.2002.0/TCGA-AA-3980-01A-02D-1018-01.birdseed.txt TCGA-AA-3980-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3980-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-3980-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-3980-01A-02R-1022-07.data.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A004-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A004-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A004-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A004-01A-01D-A008-01.seg.txt TCGA-AA-A004-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A004-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A004-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A004-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A004-01A-01R-A00A-07.data.txt COAD-AA-A00A-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00A.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00A.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00A.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.3.3.0/TCGA-AA-A00A-01A-01D-A004-05.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AA-A00A-01A-01R-A002-07.data.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00A-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00A-01A-01D-A003-01.seg.txt TCGA-AA-A00A-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00A-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00A-01.maf.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00D-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00D-01A-01D-A003-01.seg.txt TCGA-AA-A00D-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00D-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00D-01.maf.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00E-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00E-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-AA-A00E-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A00E-01A-01R-A002-07.data.txt COAD-AA-A00F-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00F.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.30.2002.0/TCGA-AA-A00F-01A-01D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00F-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00F-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00F-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00F-01A-01D-A003-01.seg.txt TCGA-AA-A00F-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00F-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00F-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-AA-A00F-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A00F-01A-01R-A002-07.data.txt COAD-AA-A00J-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00J.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00J.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00J.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.3.3.0/TCGA-AA-A00J-01A-02D-A004-05.data.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00J-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00J-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-AA-A00J-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A00J-01A-02R-A002-07.data.txt COAD-AA-A00K-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00K.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.30.2002.0/TCGA-AA-A00K-01A-02D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00K-01A-02D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00K-01A-02D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00K-01A-02D-A003-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A00K-01A-02R-A002-07.data.txt COAD-AA-A00L-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00L.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00L.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00L.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.3.3.0/TCGA-AA-A00L-01A-01D-A004-05.data.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00L-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00L-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00L-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00L-01A-01D-A003-01.seg.txt TCGA-AA-A00L-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00L-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00L-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-AA-A00L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A00L-01A-01R-A002-07.data.txt COAD-AA-A00N-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A00N.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A00N-01A-02D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A00N-01A-02D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A00N-01A-02D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A00N-01A-02D-A008-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A00O-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A00O-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A00O-01A-02R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A00O-01A-02R-A00A-07.data.txt COAD-AA-A00Q-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00Q.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00Q.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00Q.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.3.3.0/TCGA-AA-A00Q-01A-01D-A004-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A00Q-01A-31R-A076-13.data.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00R-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00R-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-AA-A00R-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A00R-01A-01R-A002-07.data.txt COAD-AA-A00U-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A00U.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.30.2002.0/TCGA-AA-A00Z-01A-01D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00Z-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00Z-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00Z-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A00Z-01A-01D-A003-01.seg.txt TCGA-AA-A00Z-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00Z-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A00Z-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-AA-A00Z-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A00Z-01A-01R-A002-07.data.txt COAD-AA-A010-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A010.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A010.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A010.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.4.3.0/TCGA-AA-A010-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A010-01A-54R-A076-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A010-01A-54R-A076-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A010-01A-01R-A089-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A010-01A-01R-A089-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A010-01A-01R-A089-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A010-01A-01R-A089-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A010-01A-01R-A089-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A010-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A010-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A010-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A010-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A010-01A-01D-A008-01.seg.txt TCGA-AA-A010-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A010-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A010-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A010-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A010-01A-01R-A00A-07.data.txt COAD-AA-A017-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A017.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A017.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A017.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.4.3.0/TCGA-AA-A017-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AA-A017-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A017-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A017-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A017-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A017-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A017-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A017-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A017-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A017-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A017-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A017-01A-01D-A008-01.seg.txt TCGA-AA-A017-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A017-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A017-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A017-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A017-01A-01R-A00A-07.data.txt COAD-AA-A01C-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01C.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01C.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01C.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01C-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01C-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01C-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A01C-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01C-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01C-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01C-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01C-01A-01D-A008-01.seg.txt TCGA-AA-A01C-01 /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A01C-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A01C-01A-01R-A00A-07.data.txt COAD-AA-A01D-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01D.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01D.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01D.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.4.3.0/TCGA-AA-A01D-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01D-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01D-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AA-A01D-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01D-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01D-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01D-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01D-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01D-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A01D-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01D-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01D-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01D-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01D-01A-01D-A008-01.seg.txt TCGA-AA-A01D-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01D-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01D-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A01D-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A01D-01A-01R-A00A-07.data.txt COAD-AA-A01F-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A01F.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A01F.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A01F.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A01F-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A01F-01A-01D-A003-01.seg.txt TCGA-AA-A01F-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A01F-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A01F-01.maf.txt 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/xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01I-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01I-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A01I-01A-02R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A01I-01A-02R-A00A-07.data.txt COAD-AA-A01K-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01K.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01K.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A01K.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AA-A01K-01A-01D-A077-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.4.3.0/TCGA-AA-A01K-01A-01D-A00B-05.data.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01K-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A01K-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01K-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01K-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01K-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A01K-01A-01D-A008-01.seg.txt TCGA-AA-A01K-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01K-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01K-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A01K-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A01K-01A-01R-A00A-07.data.txt COAD-AA-A01P-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01P.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01P.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01P.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01P-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01P-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01P-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01P-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01P-01A-21R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A01P-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01P-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01P-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01P-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01P-01A-21D-A080-01.seg.txt TCGA-AA-A01P-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01P-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01P-01.maf.txt COAD-AA-A01Q-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A01Q.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A01Q.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.30.22.0/TCGA-AA-A01Q.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.3.3.0/TCGA-AA-A01Q-01A-01D-A004-05.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AA-A01Q-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Q-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Q-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Q-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Q-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Q-01A-01R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.30.2002.0/TCGA-AA-A01Q-01A-01D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A01Q-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A01Q-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A01Q-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.30.2002.0/TCGA-AA-A01Q-01A-01D-A003-01.seg.txt TCGA-AA-A01Q-01 /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A01Q-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_COAD.SOLiD_DNA.Level_2.2.4.0/TCGA-AA-A01Q-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-AA-A01Q-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A01Q-01A-01R-A002-07.data.txt COAD-AA-A01R-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01R.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01R.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01R.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01R-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01R-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01R-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01R-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01R-01A-21R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A01R-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01R-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01R-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01R-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01R-01A-21D-A080-01.seg.txt TCGA-AA-A01R-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01R-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01R-01.maf.txt COAD-AA-A01S-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01S.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01S.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01S.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.8.3.0/TCGA-AA-A01S-01A-21D-A081-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01S-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01S-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01S-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01S-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01S-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01S-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01S-01A-21R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A01S-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01S-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01S-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01S-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01S-01A-21D-A080-01.seg.txt TCGA-AA-A01S-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01S-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01S-01.maf.txt COAD-AA-A01T-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01T.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01T.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01T.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AA-A01T-01A-21D-A079-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.8.3.0/TCGA-AA-A01T-01A-21D-A081-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01T-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01T-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01T-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01T-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01T-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01T-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01T-01A-21R-A16W-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A01T-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01T-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01T-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01T-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01T-01A-21D-A080-01.seg.txt TCGA-AA-A01T-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01T-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01T-01.maf.txt COAD-AA-A01V-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01V.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01V.clin.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01V-01A-23R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01V-01A-23R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01V-01A-23R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01V-01A-23R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01V-01A-23R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01V-01A-23R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A01V-01A-23D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01V-01A-23D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01V-01A-23D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01V-01A-23D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01V-01A-23D-A080-01.seg.txt TCGA-AA-A01V-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01V-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01V-01.maf.txt COAD-AA-A01X-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01X.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01X.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01X.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.8.3.0/TCGA-AA-A01X-01A-21D-A081-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01X-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A01X-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01X-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01X-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01X-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01X-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01X-01A-21R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A01X-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01X-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01X-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01X-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01X-01A-21D-A080-01.seg.txt TCGA-AA-A01X-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01X-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01X-01.maf.txt COAD-AA-A01Z-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01Z.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01Z.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A01Z.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Z-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Z-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Z-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A01Z-01A-11R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A01Z-01A-11D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01Z-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01Z-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01Z-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A01Z-01A-11D-A080-01.seg.txt TCGA-AA-A01Z-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01Z-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A01Z-01.maf.txt COAD-AA-A022-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A022.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A022.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A022-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A022-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A022-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A022-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A022-01A-21R-A16W-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A022-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A022-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A022-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A022-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A022-01A-21D-A080-01.seg.txt TCGA-AA-A022-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A022-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A022-01.maf.txt COAD-AA-A024-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A024.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A024.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A024.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.4.3.0/TCGA-AA-A024-01A-02D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A024-01A-11R-A076-13.data.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A024-01A-02R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A024-01A-02R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A024-01A-02D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A024-01A-02D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A024-01A-02D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A024-01A-02D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A024-01A-02D-A008-01.seg.txt TCGA-AA-A024-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A024-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A024-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A024-01A-02R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A024-01A-02R-A00A-07.data.txt COAD-AA-A029-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A029.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A029.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A029-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A029-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A029-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A029-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A029-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A029-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A029-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A029-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A029-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A029-01A-01D-A008-01.seg.txt TCGA-AA-A029-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A029-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A029-01.maf.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A02E-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A02E-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02E-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02E-01A-01D-A008-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A02F.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A02F.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A02F.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.4.3.0/TCGA-AA-A02F-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A02F-01A-21R-A076-13.data.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02F-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02F-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02F-01A-01D-A008-01.seg.txt TCGA-AA-A02F-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A02F-01.wig.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A02K-01A-21D-A080-01.birdseed.txt TCGA-AA-A02K-01 COAD-AA-A02O-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A02O.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A02O.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A02O.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AA-A02O-01A-21D-A079-02.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A02O-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A02O-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A02O-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A02O-01A-21D-A080-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A02R-01A-01R-A00A-07.data.txt COAD-AA-A02W-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A02W.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A02W.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.33.22.0/TCGA-AA-A02W.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.4.3.0/TCGA-AA-A02W-01A-01D-A00B-05.data.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A02W-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.33.2002.0/TCGA-AA-A02W-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02W-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02W-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02W-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.33.2002.0/TCGA-AA-A02W-01A-01D-A008-01.seg.txt TCGA-AA-A02W-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A02W-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A02W-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AA-A02W-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AA-A02W-01A-01R-A00A-07.data.txt COAD-AA-A02Y-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A02Y.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A02Y.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A02Y.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AA-A02Y-01A-43D-A079-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.8.3.0/TCGA-AA-A02Y-01A-43D-A081-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A02Y-01A-43R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A02Y-01A-43R-A082-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A02Y-01A-43D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A02Y-01A-43D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A02Y-01A-43D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A02Y-01A-43D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A02Y-01A-43D-A080-01.seg.txt TCGA-AA-A02Y-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A02Y-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A02Y-01.maf.txt COAD-AA-A03F-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A03F.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A03F.clin.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A03F-01A-11R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03F-01A-11R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03F-01A-11R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03F-01A-11R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03F-01A-11R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03F-01A-11R-A16W-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A03F-01A-11D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A03F-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A03F-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A03F-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A03F-01A-11D-A080-01.seg.txt TCGA-AA-A03F-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A03F-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A03F-01.maf.txt COAD-AA-A03J-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A03J.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A03J.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.66.22.0/TCGA-AA-A03J.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AA-A03J-01A-21D-A079-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.8.3.0/TCGA-AA-A03J-01A-21D-A081-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A03J-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AA-A03J-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03J-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03J-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03J-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03J-01A-21R-A16W-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AA-A03J-01A-21R-A16W-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.66.2002.0/TCGA-AA-A03J-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A03J-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A03J-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A03J-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.66.2003.0/TCGA-AA-A03J-01A-21D-A080-01.seg.txt TCGA-AA-A03J-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A03J-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AA-A03J-01.maf.txt COAD-AD-5900-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AD-5900.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AD-5900.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AD-5900.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AD-5900.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AD-5900.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AD-5900.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-AD-5900-01A-11D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-5900-01A-11H-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-5900-01A-11H-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AD-5900-01A-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-AD-5900-01A-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AD-5900-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AD-5900-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AD-5900-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AD-5900-01A-11D-1649-01.seg.txt TCGA-AD-5900-01 COAD-AD-6548-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AD-6548.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AD-6548.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AD-6548.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AD-6548.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AD-6548.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AD-6548.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-AD-6548-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6548-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6548-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AD-6548-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AD-6548-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AD-6548-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AD-6548-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AD-6548-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AD-6548-01A-11D-1834-01.seg.txt TCGA-AD-6548-01 COAD-AD-6888-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6888.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6888.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6888.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6888.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6888.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6888.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6888-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6888-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6888-01A-11H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6888-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6888-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6888-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6888-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6888-01A-11D-1923-01.seg.txt TCGA-AD-6888-01 COAD-AD-6889-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6889.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6889.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6889.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6889.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6889.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6889.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6889-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6889-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6889-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AD-6889-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6889-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6889-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6889-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6889-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6889-01A-11D-1923-01.seg.txt TCGA-AD-6889-01 COAD-AD-6890-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6890.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6890.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6890.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6890.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6890.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6890.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6890-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6890-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6890-01A-11H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6890-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6890-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6890-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6890-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6890-01A-11D-1923-01.seg.txt TCGA-AD-6890-01 COAD-AD-6895-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6895.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6895.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6895.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6895.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6895.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6895.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6895-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6895-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6895-01A-11H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6895-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6895-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6895-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6895-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6895-01A-11D-1923-01.seg.txt TCGA-AD-6895-01 COAD-AD-6899-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6899.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6899.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6899.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6899.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6899.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6899.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6899-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6899-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6899-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AD-6899-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6899-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6899-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6899-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6899-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6899-01A-11D-1923-01.seg.txt TCGA-AD-6899-01 COAD-AD-6901-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6901.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6901.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6901.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6901.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6901.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6901.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6901-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6901-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6901-01A-11H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6901-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6901-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6901-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6901-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6901-01A-11D-1923-01.seg.txt TCGA-AD-6901-01 COAD-AD-6963-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6963.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6963.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6963.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6963.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6963.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6963.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6963-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6963-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6963-01A-11H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6963-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6963-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6963-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6963-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6963-01A-11D-1923-01.seg.txt TCGA-AD-6963-01 COAD-AD-6964-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6964.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6964.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6964.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6964.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6964.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6964.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6964-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6964-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6964-01A-11H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6964-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6964-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6964-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6964-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6964-01A-11D-1923-01.seg.txt TCGA-AD-6964-01 COAD-AD-6965-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6965.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6965.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-AD-6965.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6965.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6965.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-AD-6965.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-AD-6965-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6965-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AD-6965-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AD-6965-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-AD-6965-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6965-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6965-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6965-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-AD-6965-01A-11D-1923-01.seg.txt TCGA-AD-6965-01 COAD-AM-5820-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AM-5820.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AM-5820.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AM-5820.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AM-5820.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AM-5820.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AM-5820.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-AM-5820-01A-01D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AM-5820-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AM-5820-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AM-5820-01A-21-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-AM-5820-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AM-5820-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AM-5820-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AM-5820-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AM-5820-01A-01D-1649-01.seg.txt TCGA-AM-5820-01 COAD-AM-5821-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AM-5821.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AM-5821.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AM-5821.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AM-5821.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AM-5821.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AM-5821.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-AM-5821-01A-01D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AM-5821-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AM-5821-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AM-5821-01A-21-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-AM-5821-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AM-5821-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AM-5821-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AM-5821-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AM-5821-01A-01D-1649-01.seg.txt TCGA-AM-5821-01 COAD-AU-3779-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AU-3779.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AU-3779.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AU-3779.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AU-3779.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AU-3779.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AU-3779.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AU-3779-01A-01D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AU-3779-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AU-3779-01A-01T-1722-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AU-3779-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AU-3779-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AU-3779-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AU-3779-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AU-3779-01A-01D-1717-01.seg.txt TCGA-AU-3779-01 COAD-AU-6004-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AU-6004.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AU-6004.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AU-6004.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AU-6004.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AU-6004.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AU-6004.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AU-6004-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AU-6004-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AU-6004-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AU-6004-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AU-6004-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AU-6004-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AU-6004-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AU-6004-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AU-6004-01A-11D-1717-01.seg.txt TCGA-AU-6004-01 COAD-AY-4070-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.45.21.0/TCGA-AY-4070.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.45.21.0/TCGA-AY-4070.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.45.21.0/TCGA-AY-4070.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.45.23.0/TCGA-AY-4070.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.45.23.0/TCGA-AY-4070.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.45.23.0/TCGA-AY-4070.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AY-4070-01A-01D-1109-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.7.3.0/TCGA-AY-4070-01A-01D-1110-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AY-4070-01A-01T-1114-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AY-4070-01A-01T-1114-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AY-4070-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4070-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4070-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4070-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4070-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4070-01A-01R-1113-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.45.2002.0/TCGA-AY-4070-01A-01D-1427-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.45.2002.0/TCGA-AY-4070-01A-01D-1427-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.45.2002.0/TCGA-AY-4070-01A-01D-1427-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.45.2002.0/TCGA-AY-4070-01A-01D-1427-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.45.2002.0/TCGA-AY-4070-01A-01D-1427-01.seg.txt TCGA-AY-4070-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AY-4070-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AY-4070-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AY-4070-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AY-4070-01A-01R-1113-07.data.txt COAD-AY-4071-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.45.21.0/TCGA-AY-4071.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.45.21.0/TCGA-AY-4071.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.45.21.0/TCGA-AY-4071.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.45.23.0/TCGA-AY-4071.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.45.23.0/TCGA-AY-4071.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.45.23.0/TCGA-AY-4071.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AY-4071-01A-01D-1109-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation27.Level_3.7.3.0/TCGA-AY-4071-01A-01D-1110-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AY-4071-01A-01T-1114-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AY-4071-01A-01T-1114-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__coverage__data/unc.edu_COAD.IlluminaGA_RNASeq.Level_3.1.0.0/TCGA-AY-4071-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4071-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4071-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4071-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4071-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AY-4071-01A-01R-1113-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.45.2002.0/TCGA-AY-4071-01A-01D-1427-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.45.2002.0/TCGA-AY-4071-01A-01D-1427-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.45.2002.0/TCGA-AY-4071-01A-01D-1427-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.45.2002.0/TCGA-AY-4071-01A-01D-1427-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.45.2002.0/TCGA-AY-4071-01A-01D-1427-01.seg.txt TCGA-AY-4071-01 /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AY-4071-01.wig.txt /xchip/gdac_data/normalized/diced/coad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_COAD.IlluminaGA_DNASeq.Level_2.2.2.0/TCGA-AY-4071-01.maf.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_2.1.4.0/TCGA-AY-4071-01A-01R-1113-07.data.txt /xchip/gdac_data/normalized/diced/coad/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_COAD.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-AY-4071-01A-01R-1113-07.data.txt COAD-AY-5543-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AY-5543.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AY-5543.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AY-5543.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AY-5543.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AY-5543.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-AY-5543.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-AY-5543-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AY-5543-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AY-5543-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AY-5543-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AY-5543-01A-01D-1649-01.seg.txt TCGA-AY-5543-01 COAD-AY-6196-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AY-6196.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AY-6196.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AY-6196.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AY-6196.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AY-6196.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AY-6196.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AY-6196-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AY-6196-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AY-6196-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AY-6196-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AY-6196-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6196-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6196-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6196-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6196-01A-11D-1717-01.seg.txt TCGA-AY-6196-01 COAD-AY-6197-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AY-6197.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AY-6197.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AY-6197.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AY-6197.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AY-6197.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AY-6197.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AY-6197-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AY-6197-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AY-6197-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AY-6197-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AY-6197-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6197-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6197-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6197-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6197-01A-11D-1717-01.seg.txt TCGA-AY-6197-01 COAD-AY-6386-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AY-6386.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AY-6386.clin.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AY-6386-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AY-6386-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AY-6386-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AY-6386-01A-21D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6386-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6386-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6386-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AY-6386-01A-21D-1717-01.seg.txt TCGA-AY-6386-01 COAD-AZ-4308-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4308.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4308.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4308.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4308.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4308.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4308.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AZ-4323-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-4323-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-4323-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-4323-01A-21D-1834-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AZ-4681-01A-01R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-AZ-4681-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4681-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4681-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4681-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4681-01A-01D-1406-01.seg.txt TCGA-AZ-4681-01 COAD-AZ-4682-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4682.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4682.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4682.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4682.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4682.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4682.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AZ-4682-01B-01D-1405-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.1.4.0/TCGA-AZ-4682-01B-01D-1407-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AZ-4682-01B-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AZ-4682-01B-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-4682-01B-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-AZ-4682-01B-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4682-01B-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4682-01B-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4682-01B-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4682-01B-01D-1406-01.seg.txt TCGA-AZ-4682-01 COAD-AZ-4684-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4684.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4684.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-AZ-4684.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4684.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4684.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-AZ-4684.clin.txt 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/xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AZ-4684-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-AZ-4684-01A-01R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-AZ-4684-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4684-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4684-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4684-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-AZ-4684-01A-01D-1406-01.seg.txt TCGA-AZ-4684-01 COAD-AZ-5403-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AZ-5403.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-AZ-5403.clin.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-5403-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-5403-01A-01T-1652-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-AZ-5403-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AZ-5403-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AZ-5403-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AZ-5403-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-AZ-5403-01A-01D-1649-01.seg.txt TCGA-AZ-5403-01 COAD-AZ-5407-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AZ-5407.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AZ-5407.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-AZ-5407.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AZ-5407.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AZ-5407.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-AZ-5407.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-AZ-5407-01A-01D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-5407-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-5407-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-5407-01A-22-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-AZ-5407-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AZ-5407-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AZ-5407-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AZ-5407-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-AZ-5407-01A-01D-1717-01.seg.txt TCGA-AZ-5407-01 COAD-AZ-6598-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6598.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6598.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6598.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6598.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6598.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6598.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-AZ-6598-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6598-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6598-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6598-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-AZ-6598-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6598-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6598-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6598-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6598-01A-11D-1770-01.seg.txt TCGA-AZ-6598-01 COAD-AZ-6599-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6599.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6599.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6599.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6599.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6599.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6599.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-AZ-6599-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6599-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6599-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6599-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-AZ-6599-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6599-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6599-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6599-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6599-01A-11D-1770-01.seg.txt TCGA-AZ-6599-01 COAD-AZ-6600-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6600.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6600.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6600.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6600.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6600.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6600.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-AZ-6600-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6600-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6600-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6600-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-AZ-6600-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6600-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6600-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6600-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6600-01A-11D-1770-01.seg.txt TCGA-AZ-6600-01 COAD-AZ-6601-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6601.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6601.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-AZ-6601.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6601.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6601.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-AZ-6601.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-AZ-6601-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6601-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6601-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6601-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-AZ-6601-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6601-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6601-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6601-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-AZ-6601-01A-11D-1770-01.seg.txt TCGA-AZ-6601-01 COAD-AZ-6603-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6603.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6603.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6603.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6603.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6603.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6603.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-AZ-6603-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6603-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6603-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6603-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AZ-6603-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6603-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6603-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6603-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6603-01A-11D-1834-01.seg.txt TCGA-AZ-6603-01 COAD-AZ-6605-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6605.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6605.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6605.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6605.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6605.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6605.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-AZ-6605-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6605-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6605-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6605-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AZ-6605-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6605-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6605-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6605-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6605-01A-11D-1834-01.seg.txt TCGA-AZ-6605-01 COAD-AZ-6606-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6606.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6606.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6606.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6606.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6606.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6606.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-AZ-6606-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6606-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6606-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6606-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AZ-6606-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6606-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6606-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6606-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6606-01A-11D-1834-01.seg.txt TCGA-AZ-6606-01 COAD-AZ-6607-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6607.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6607.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6607.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6607.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6607.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6607.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-AZ-6607-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6607-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6607-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6607-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AZ-6607-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6607-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6607-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6607-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6607-01A-11D-1834-01.seg.txt TCGA-AZ-6607-01 COAD-AZ-6608-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6608.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6608.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-AZ-6608.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6608.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6608.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-AZ-6608.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-AZ-6608-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6608-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-AZ-6608-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AZ-6608-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-AZ-6608-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6608-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6608-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6608-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-AZ-6608-01A-11D-1834-01.seg.txt TCGA-AZ-6608-01 COAD-CA-5254-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-5254.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-5254.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-5254.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-5254.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-5254.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-5254.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-CA-5254-01A-21D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-5254-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-5254-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-5254-01A-22-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CA-5254-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-5254-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-5254-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-5254-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-5254-01A-21D-1834-01.seg.txt TCGA-CA-5254-01 COAD-CA-5255-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-5255.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-5255.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-5255.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-5255.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-5255.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-5255.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-CA-5255-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-5255-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-5255-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-5255-01A-12-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CA-5255-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-5255-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-5255-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-5255-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-5255-01A-11D-1834-01.seg.txt TCGA-CA-5255-01 COAD-CA-5256-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CA-5256.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CA-5256.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CA-5256.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CA-5256.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CA-5256.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CA-5256.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-CA-5256-01A-01D-1405-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.1.4.0/TCGA-CA-5256-01A-01D-1407-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-CA-5256-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-CA-5256-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-5256-01A-21-1933-20.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CA-5256-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CA-5256-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CA-5256-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CA-5256-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CA-5256-01A-01R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-CA-5256-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CA-5256-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CA-5256-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CA-5256-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CA-5256-01A-01D-1406-01.seg.txt TCGA-CA-5256-01 COAD-CA-5796-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CA-5796.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CA-5796.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CA-5796.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CA-5796.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CA-5796.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CA-5796.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-CA-5796-01A-01D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-5796-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-5796-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-5796-01A-21-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CA-5796-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CA-5796-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CA-5796-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CA-5796-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CA-5796-01A-01D-1649-01.seg.txt TCGA-CA-5796-01 COAD-CA-5797-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CA-5797.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CA-5797.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CA-5797.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CA-5797.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CA-5797.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CA-5797.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-CA-5797-01A-01D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-5797-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-5797-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-5797-01A-21-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CA-5797-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CA-5797-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CA-5797-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CA-5797-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CA-5797-01A-01D-1649-01.seg.txt TCGA-CA-5797-01 COAD-CA-6715-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6715.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6715.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-CA-6715-01A-21D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6715-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6715-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-6715-01A-23-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CA-6715-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6715-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6715-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6715-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6715-01A-21D-1834-01.seg.txt TCGA-CA-6715-01 COAD-CA-6716-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6716.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6716.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6716.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6716.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6716.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6716.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-CA-6716-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6716-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6716-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-6716-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CA-6716-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6716-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6716-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6716-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6716-01A-11D-1834-01.seg.txt TCGA-CA-6716-01 COAD-CA-6717-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6717.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6717.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6717.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6717.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6717.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6717.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-CA-6717-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6717-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6717-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-6717-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CA-6717-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6717-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6717-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6717-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6717-01A-11D-1834-01.seg.txt TCGA-CA-6717-01 COAD-CA-6718-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6718.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6718.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6718.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6718.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6718.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6718.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-CA-6718-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6718-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6718-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-6718-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CA-6718-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6718-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6718-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6718-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6718-01A-11D-1834-01.seg.txt TCGA-CA-6718-01 COAD-CA-6719-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6719.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6719.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CA-6719.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6719.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6719.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CA-6719.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-CA-6719-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6719-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CA-6719-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CA-6719-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CA-6719-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6719-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6719-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6719-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CA-6719-01A-11D-1834-01.seg.txt TCGA-CA-6719-01 COAD-CK-4947-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-4947.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-4947.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-4947.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-4947.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-4947.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-4947.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-CK-4947-01B-11D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-4947-01B-11H-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-4947-01B-11H-1652-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CK-4947-01B-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-4947-01B-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-4947-01B-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-4947-01B-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-4947-01B-11D-1649-01.seg.txt TCGA-CK-4947-01 COAD-CK-4948-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-4948.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-4948.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-4948.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-4948.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-4948.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-4948.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-CK-4948-01B-11D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-4948-01B-11H-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-4948-01B-11H-1652-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CK-4948-01B-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-4948-01B-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-4948-01B-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-4948-01B-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-4948-01B-11D-1649-01.seg.txt TCGA-CK-4948-01 COAD-CK-4950-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CK-4950.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CK-4950.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CK-4950.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-CK-4950.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-CK-4950.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-CK-4950.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-CK-4950-01A-01D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-4950-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-4950-01A-01T-1722-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-CK-4950-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CK-4950-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CK-4950-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CK-4950-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CK-4950-01A-01D-1717-01.seg.txt TCGA-CK-4950-01 COAD-CK-4951-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CK-4951.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CK-4951.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CK-4951.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CK-4951.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CK-4951.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CK-4951.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-CK-4951-01A-01D-1405-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.1.4.0/TCGA-CK-4951-01A-01D-1407-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-CK-4951-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-CK-4951-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CK-4951-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CK-4951-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CK-4951-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CK-4951-01A-01R-1410-07.data.txt /xchip/gdac_data/normalized/diced/coad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_COAD.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-CK-4951-01A-01R-1410-07.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-CK-4951-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CK-4951-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CK-4951-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CK-4951-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CK-4951-01A-01D-1406-01.seg.txt TCGA-CK-4951-01 COAD-CK-4952-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CK-4952.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CK-4952.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CK-4952.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-CK-4952.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-CK-4952.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-CK-4952.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-CK-4952-01A-01D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-4952-01A-01T-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-4952-01A-01T-1722-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-CK-4952-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CK-4952-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CK-4952-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CK-4952-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CK-4952-01A-01D-1717-01.seg.txt TCGA-CK-4952-01 COAD-CK-5912-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5912.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5912.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5912.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5912.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5912.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5912.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-CK-5912-01A-11D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-5912-01A-11H-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-5912-01A-11H-1652-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CK-5912-01A-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5912-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5912-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5912-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5912-01A-11D-1649-01.seg.txt TCGA-CK-5912-01 COAD-CK-5913-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5913.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5913.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5913.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5913.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5913.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5913.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-CK-5913-01A-11D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-5913-01A-11H-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-5913-01A-11H-1652-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CK-5913-01A-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5913-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5913-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5913-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5913-01A-11D-1649-01.seg.txt TCGA-CK-5913-01 COAD-CK-5914-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5914.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5914.clin.txt 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/xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5915.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5915.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CK-5915.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5915.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5915.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CK-5915.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CK-5916-01A-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5916-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5916-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CK-5916-01A-11D-1649-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-6748-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CK-6748-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CK-6748-01A-23-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CK-6748-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CK-6748-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CK-6748-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CK-6748-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CK-6748-01A-11D-1834-01.seg.txt TCGA-CK-6748-01 COAD-CK-6751-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CK-6751.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CK-6751.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CK-6751.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CK-6751.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CK-6751.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CK-6751.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CK-6751-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CK-6751-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CK-6751-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CK-6751-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CK-6751-01A-11D-1834-01.seg.txt TCGA-CK-6751-01 COAD-CM-4743-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CM-4743.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CM-4743.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-CM-4743.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-CM-4743.clin.txt 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/xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CM-4743-01A-21-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-CM-4743-01A-01D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-4743-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-4743-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-4743-01A-01D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-4743-01A-01D-1717-01.seg.txt TCGA-CM-4743-01 COAD-CM-4744-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CM-4744.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CM-4744.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CM-4744.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CM-4744.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CM-4744.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CM-4744.clin.txt /xchip/gdac_data/normalized/diced/coad/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_COAD.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-CM-4744-01A-01D-1405-02.seg.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.1.4.0/TCGA-CM-4744-01A-01D-1407-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-CM-4744-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-CM-4744-01A-01T-1409-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CM-4744-01A-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-CM-4744-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CM-4744-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CM-4744-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CM-4744-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CM-4744-01A-01D-1406-01.seg.txt TCGA-CM-4744-01 COAD-CM-4746-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CM-4746.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CM-4746.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.76.17.0/TCGA-CM-4746.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CM-4746.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CM-4746.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.76.19.0/TCGA-CM-4746.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.76.2002.0/TCGA-CM-5341-01A-01D-1406-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CM-5341-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CM-5341-01A-01D-1406-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.76.2002.0/TCGA-CM-5341-01A-01D-1406-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CM-5348-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CM-5348-01A-22-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-CM-5348-01A-21D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-5348-01A-21D-1717-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CM-5349-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CM-5349-01A-21H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CM-5349-01A-22-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-CM-5349-01A-21D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-5349-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-5349-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-5349-01A-21D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-CM-5349-01A-21D-1717-01.seg.txt TCGA-CM-5349-01 COAD-CM-5860-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-5860.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-5860.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-5860.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-5860.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-5860.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-5860.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CM-5860-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5860-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5860-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5860-01A-01D-1649-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5861-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5861-01A-01D-1649-01.seg.txt TCGA-CM-5861-01 COAD-CM-5862-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-5862.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-5862.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-5862.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5862-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5862-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5862-01A-01D-1649-01.seg.txt TCGA-CM-5862-01 COAD-CM-5863-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-5863.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-5863.clin.txt 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/xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CM-5863-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-CM-5863-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CM-5863-01A-41-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CM-5863-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-5863-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-5863-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-5863-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-5863-01A-21D-1834-01.seg.txt TCGA-CM-5863-01 COAD-CM-5864-TP 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CM-5864-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5864-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5864-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-5864-01A-01D-1649-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6163.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6163.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6163.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6163.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6163.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6163.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CM-6163-01A-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6163-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6163-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6163-01A-11D-1649-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6167.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6167.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6167.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6167.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6167.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6167.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CM-6167-01A-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6167-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6167-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6167-01A-11D-1649-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6169-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6169-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6169-01A-11D-1649-01.seg.txt TCGA-CM-6169-01 COAD-CM-6170-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6170.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6170.clin.txt 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/xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6171.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6171.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-CM-6171.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6171.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6171.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-CM-6171.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-CM-6171-01A-11D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6171-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6171-01A-11D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-CM-6171-01A-11D-1649-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6676.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6676.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6676.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CM-6676.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CM-6676.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CM-6676.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CM-6676-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6676-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6676-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6676-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6676-01A-11D-1834-01.seg.txt TCGA-CM-6676-01 COAD-CM-6677-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6677.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6677.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6677.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CM-6677.clin.txt 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/xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CM-6677-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CM-6677-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6677-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6677-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6677-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6677-01A-11D-1834-01.seg.txt TCGA-CM-6677-01 COAD-CM-6678-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6678.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6678.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6678.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6679-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6679-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6679-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6679-01A-11D-1834-01.seg.txt TCGA-CM-6679-01 COAD-CM-6680-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6680.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6680.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-CM-6680.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CM-6680.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CM-6680.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-CM-6680.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-CM-6680-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6680-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6680-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6680-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-CM-6680-01A-11D-1834-01.seg.txt TCGA-CM-6680-01 COAD-D5-5537-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-5537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-5537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-5537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-5537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-5537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-5537.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-5537-01A-21D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5537-01A-21H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5537-01A-21H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-5537-01A-21D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-5537-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-5537-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-5537-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-5537-01A-21D-1923-01.seg.txt TCGA-D5-5537-01 COAD-D5-5538-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5538.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-D5-5538-01A-01D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5538-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5538-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-5538-01A-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-D5-5538-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5538-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5538-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5538-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5538-01A-01D-1649-01.seg.txt TCGA-D5-5538-01 COAD-D5-5539-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5539.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-D5-5539-01A-01D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5539-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5539-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-5539-01A-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-D5-5539-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5539-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5539-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5539-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5539-01A-01D-1649-01.seg.txt TCGA-D5-5539-01 COAD-D5-5540-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5540.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-D5-5540-01A-01D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5540-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5540-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-5540-01A-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-D5-5540-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5540-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5540-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5540-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5540-01A-01D-1649-01.seg.txt TCGA-D5-5540-01 COAD-D5-5541-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.89.16.0/TCGA-D5-5541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.89.17.0/TCGA-D5-5541.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.2.4.0/TCGA-D5-5541-01A-01D-1651-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5541-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-5541-01A-01T-1652-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-5541-01A-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.89.2004.0/TCGA-D5-5541-01A-01D-1649-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5541-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5541-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5541-01A-01D-1649-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.89.2002.0/TCGA-D5-5541-01A-01D-1649-01.seg.txt TCGA-D5-5541-01 COAD-D5-6529-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-D5-6529.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-D5-6529.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-D5-6529.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-D5-6529.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-D5-6529.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-D5-6529.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-D5-6529-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6529-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6529-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6529-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-D5-6529-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-D5-6529-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-D5-6529-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-D5-6529-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-D5-6529-01A-11D-1770-01.seg.txt TCGA-D5-6529-01 COAD-D5-6530-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6530.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6530.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6530.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6530.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6530.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6530.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6530-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6530-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6530-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6530-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6530-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6530-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6530-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6530-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6530-01A-11D-1717-01.seg.txt TCGA-D5-6530-01 COAD-D5-6531-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6531.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6531.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6531.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6531.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6531.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6531.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6531-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6531-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6531-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6531-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6531-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6531-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6531-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6531-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6531-01A-11D-1717-01.seg.txt TCGA-D5-6531-01 COAD-D5-6532-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6532.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6532.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6532.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6532.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6532.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6532.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6532-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6532-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6532-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6532-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6532-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6532-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6532-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6532-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6532-01A-11D-1717-01.seg.txt TCGA-D5-6532-01 COAD-D5-6533-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6533.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6533.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6533.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6533.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6533.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6533.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6533-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6533-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6533-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6533-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6533-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6533-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6533-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6533-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6533-01A-11D-1717-01.seg.txt TCGA-D5-6533-01 COAD-D5-6534-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6534.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6534.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6534.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6534.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6534.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6534.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6534-01A-21D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6534-01A-21H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6534-01A-21H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6534-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6534-01A-21D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6534-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6534-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6534-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6534-01A-21D-1923-01.seg.txt TCGA-D5-6534-01 COAD-D5-6535-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6535.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6535.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6535.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6535.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6535.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6535.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6535-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6535-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6535-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6535-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6535-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6535-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6535-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6535-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6535-01A-11D-1717-01.seg.txt TCGA-D5-6535-01 COAD-D5-6536-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6536.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6536.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6536.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6536.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6536.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6536.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6536-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6536-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6536-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6536-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6536-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6536-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6536-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6536-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6536-01A-11D-1717-01.seg.txt TCGA-D5-6536-01 COAD-D5-6537-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6537.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6537.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6537-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6537-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6537-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6537-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6537-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6537-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6537-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6537-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6537-01A-11D-1717-01.seg.txt TCGA-D5-6537-01 COAD-D5-6538-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6538.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6538.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6538-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6538-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6538-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6538-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6538-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6538-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6538-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6538-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6538-01A-11D-1717-01.seg.txt TCGA-D5-6538-01 COAD-D5-6539-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6539.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6539.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6539-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6539-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6539-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6539-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6539-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6539-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6539-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6539-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6539-01A-11D-1717-01.seg.txt TCGA-D5-6539-01 COAD-D5-6540-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6540.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6540.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6540-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6540-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6540-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6540-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6540-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6540-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6540-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6540-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6540-01A-11D-1717-01.seg.txt TCGA-D5-6540-01 COAD-D5-6541-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-D5-6541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6541.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-D5-6541.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-D5-6541-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6541-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6541-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6541-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-D5-6541-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6541-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6541-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6541-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-D5-6541-01A-11D-1717-01.seg.txt TCGA-D5-6541-01 COAD-D5-6898-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6898.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6898.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6898.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6898.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6898.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6898.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6898-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6898-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6898-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6898-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6898-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6898-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6898-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6898-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6898-01A-11D-1923-01.seg.txt TCGA-D5-6898-01 COAD-D5-6920-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6920.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6920.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6920.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6920.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6920.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6920.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6920-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6920-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6920-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6920-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6920-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6920-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6920-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6920-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6920-01A-11D-1923-01.seg.txt TCGA-D5-6920-01 COAD-D5-6922-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6922.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6922.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6922.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6922.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6922.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6922.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6922-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6922-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6922-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6922-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6922-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6922-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6922-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6922-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6922-01A-11D-1923-01.seg.txt TCGA-D5-6922-01 COAD-D5-6923-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6923.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6923.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6923.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6923.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6923.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6923.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6923-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6923-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6923-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6923-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6923-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6923-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6923-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6923-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6923-01A-11D-1923-01.seg.txt TCGA-D5-6923-01 COAD-D5-6924-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6924.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6924.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6924.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6924.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6924.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6924.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6924-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6924-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6924-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6924-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6924-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6924-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6924-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6924-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6924-01A-11D-1923-01.seg.txt TCGA-D5-6924-01 COAD-D5-6926-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6926.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6926.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6926.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6926.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6926.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6926.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6926-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6926-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6926-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6926-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6926-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6926-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6926-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6926-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6926-01A-11D-1923-01.seg.txt TCGA-D5-6926-01 COAD-D5-6927-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6927.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6927.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6927.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6927.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6927.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6927.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6927-01A-21D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6927-01A-21H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6927-01A-21H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6927-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6927-01A-21D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6927-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6927-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6927-01A-21D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6927-01A-21D-1923-01.seg.txt TCGA-D5-6927-01 COAD-D5-6928-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6928.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6928.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6928.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6928.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6928.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6928.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6928-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6928-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6928-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6928-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6928-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6928-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6928-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6928-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6928-01A-11D-1923-01.seg.txt TCGA-D5-6928-01 COAD-D5-6929-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6929.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6929.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6929.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6929.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6929.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6929.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6929-01A-31D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6929-01A-31H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6929-01A-31H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6929-01A-31D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6929-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6929-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6929-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6929-01A-31D-1923-01.seg.txt TCGA-D5-6929-01 COAD-D5-6930-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6930.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6930.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6930.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6930.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6930.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6930.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6930-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6930-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6930-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6930-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6930-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6930-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6930-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6930-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6930-01A-11D-1923-01.seg.txt TCGA-D5-6930-01 COAD-D5-6931-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6931.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6931.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6931.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6931.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6931.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6931.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6931-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6931-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6931-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6931-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6931-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6931-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6931-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6931-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6931-01A-11D-1923-01.seg.txt TCGA-D5-6931-01 COAD-D5-6932-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6932.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6932.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-6932.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6932.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6932.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-6932.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-6932-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6932-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-6932-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-D5-6932-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-6932-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6932-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6932-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6932-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-6932-01A-11D-1923-01.seg.txt TCGA-D5-6932-01 COAD-D5-7000-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-7000.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-7000.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-D5-7000.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-7000.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-7000.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-D5-7000.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-D5-7000-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-7000-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-D5-7000-01A-11H-1927-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-D5-7000-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-7000-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-7000-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-7000-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-D5-7000-01A-11D-1923-01.seg.txt TCGA-D5-7000-01 COAD-DM-A0X9-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0X9.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0X9.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0X9.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A0X9-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A0X9-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A0X9-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A0X9-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0X9-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0X9-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0X9-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0X9-01A-11D-A151-01.seg.txt TCGA-DM-A0X9-01 COAD-DM-A0XD-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0XD.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0XD.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0XD.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A0XD-01A-12D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A0XD-01A-12H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A0XD-01A-12H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A0XD-01A-12D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0XD-01A-12D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0XD-01A-12D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0XD-01A-12D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0XD-01A-12D-A151-01.seg.txt TCGA-DM-A0XD-01 COAD-DM-A0XF-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0XF.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0XF.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A0XF.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A0XF-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A0XF-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A0XF-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A0XF-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0XF-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0XF-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0XF-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A0XF-01A-11D-A151-01.seg.txt TCGA-DM-A0XF-01 COAD-DM-A1D0-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D0.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D0.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D0.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1D0-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D0-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D0-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1D0-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D0-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D0-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D0-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D0-01A-11D-A151-01.seg.txt TCGA-DM-A1D0-01 COAD-DM-A1D4-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D4.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D4.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D4.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1D4-01A-21D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D4-01A-21H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D4-01A-21H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1D4-01A-21D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D4-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D4-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D4-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D4-01A-21D-A151-01.seg.txt TCGA-DM-A1D4-01 COAD-DM-A1D6-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D6.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D6.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D6.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1D6-01A-21D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D6-01A-21H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D6-01A-21H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1D6-01A-21D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D6-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D6-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D6-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D6-01A-21D-A151-01.seg.txt TCGA-DM-A1D6-01 COAD-DM-A1D7-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D7.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D7.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D7.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1D7-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D7-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D7-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1D7-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D7-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D7-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D7-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D7-01A-11D-A151-01.seg.txt TCGA-DM-A1D7-01 COAD-DM-A1D8-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D8.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D8.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D8.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1D8-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D8-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D8-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1D8-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D8-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D8-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D8-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D8-01A-11D-A151-01.seg.txt TCGA-DM-A1D8-01 COAD-DM-A1D9-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D9.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D9.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1D9.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1D9-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D9-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1D9-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1D9-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D9-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D9-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D9-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1D9-01A-11D-A151-01.seg.txt TCGA-DM-A1D9-01 COAD-DM-A1DA-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1DA.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1DA.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1DA.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1DA-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1DA-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1DA-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1DA-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1DA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1DA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1DA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1DA-01A-11D-A151-01.seg.txt TCGA-DM-A1DA-01 COAD-DM-A1DB-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1DB.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1DB.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1DB.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1DB-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1DB-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1DB-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1DB-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1DB-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1DB-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1DB-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1DB-01A-11D-A151-01.seg.txt TCGA-DM-A1DB-01 COAD-DM-A1HA-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1HA.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1HA.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.132.14.0/TCGA-DM-A1HA.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.5.4.0/TCGA-DM-A1HA-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1HA-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1HA-01A-11H-A154-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.132.2002.0/TCGA-DM-A1HA-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1HA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1HA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1HA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.132.2002.0/TCGA-DM-A1HA-01A-11D-A151-01.seg.txt TCGA-DM-A1HA-01 COAD-DM-A1HB-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.172.11.0/TCGA-DM-A1HB.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.172.11.0/TCGA-DM-A1HB.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.172.11.0/TCGA-DM-A1HB.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.9.4.0/TCGA-DM-A1HB-01A-22D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1HB-01A-21H-A17X-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A1HB-01A-21H-A17X-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.172.2002.0/TCGA-DM-A1HB-01A-21D-A182-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.172.2002.0/TCGA-DM-A1HB-01A-21D-A182-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.172.2002.0/TCGA-DM-A1HB-01A-21D-A182-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.172.2002.0/TCGA-DM-A1HB-01A-21D-A182-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.172.2002.0/TCGA-DM-A1HB-01A-21D-A182-01.seg.txt TCGA-DM-A1HB-01 COAD-DM-A280-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A280.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A280.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A280.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A280-01A-12D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A280-01A-12H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A280-01A-12H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A280-01A-12D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A280-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A280-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A280-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A280-01A-12D-A16U-01.seg.txt TCGA-DM-A280-01 COAD-DM-A282-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A282.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A282.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A282.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A282-01A-12D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A282-01A-12H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A282-01A-12H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A282-01A-12D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A282-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A282-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A282-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A282-01A-12D-A16U-01.seg.txt TCGA-DM-A282-01 COAD-DM-A285-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A285.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A285.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A285.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A285-01A-11D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A285-01A-11H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A285-01A-11H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A285-01A-11D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A285-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A285-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A285-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A285-01A-11D-A16U-01.seg.txt TCGA-DM-A285-01 COAD-DM-A288-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A288.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A288.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A288.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A288-01A-11D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A288-01A-11H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A288-01A-11H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A288-01A-11D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A288-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A288-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A288-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A288-01A-11D-A16U-01.seg.txt TCGA-DM-A288-01 COAD-DM-A28A-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28A.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28A.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28A.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A28A-01A-21D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28A-01A-21H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28A-01A-21H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A28A-01A-21D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28A-01A-21D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28A-01A-21D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28A-01A-21D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28A-01A-21D-A16U-01.seg.txt TCGA-DM-A28A-01 COAD-DM-A28C-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28C.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28C.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28C.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A28C-01A-11D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28C-01A-11H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28C-01A-11H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A28C-01A-11D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28C-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28C-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28C-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28C-01A-11D-A16U-01.seg.txt TCGA-DM-A28C-01 COAD-DM-A28E-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28E.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28E.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28E.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A28E-01A-11D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28E-01A-11H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28E-01A-11H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A28E-01A-11D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28E-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28E-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28E-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28E-01A-11D-A16U-01.seg.txt TCGA-DM-A28E-01 COAD-DM-A28F-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28F.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28F.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28F.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A28F-01A-11D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28F-01A-11H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28F-01A-11H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A28F-01A-11D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28F-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28F-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28F-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28F-01A-11D-A16U-01.seg.txt TCGA-DM-A28F-01 COAD-DM-A28G-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28G.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28G.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28G.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A28G-01A-11D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28G-01A-11H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28G-01A-11H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A28G-01A-11D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28G-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28G-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28G-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28G-01A-11D-A16U-01.seg.txt TCGA-DM-A28G-01 COAD-DM-A28H-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28H.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28H.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28H.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A28H-01A-11D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28H-01A-11H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28H-01A-11H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A28H-01A-11D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28H-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28H-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28H-01A-11D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28H-01A-11D-A16U-01.seg.txt TCGA-DM-A28H-01 COAD-DM-A28K-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28K.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28K.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28K.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A28K-01A-21D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28K-01A-21H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28K-01A-21H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A28K-01A-21D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28K-01A-21D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28K-01A-21D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28K-01A-21D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28K-01A-21D-A16U-01.seg.txt TCGA-DM-A28K-01 COAD-DM-A28M-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28M.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28M.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.154.11.0/TCGA-DM-A28M.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.7.4.0/TCGA-DM-A28M-01A-12D-A16X-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28M-01A-12H-A16S-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-DM-A28M-01A-12H-A16S-13.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.154.2002.0/TCGA-DM-A28M-01A-12D-A16U-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28M-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28M-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28M-01A-12D-A16U-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.154.2002.0/TCGA-DM-A28M-01A-12D-A16U-01.seg.txt TCGA-DM-A28M-01 COAD-F4-6459-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6459.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6459.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6459.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6459.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6459.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6459.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-F4-6459-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6459-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6459-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6459-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-F4-6459-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6459-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6459-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6459-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6459-01A-11D-1770-01.seg.txt TCGA-F4-6459-01 COAD-F4-6460-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6460.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6460.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6460.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6460.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6460.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6460.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-F4-6460-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6460-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6460-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6460-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-F4-6460-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6460-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6460-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6460-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6460-01A-11D-1770-01.seg.txt TCGA-F4-6460-01 COAD-F4-6461-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6461.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6461.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6461.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6461.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6461.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6461.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-F4-6461-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6461-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6461-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6461-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-F4-6461-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6461-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6461-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6461-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6461-01A-11D-1770-01.seg.txt TCGA-F4-6461-01 COAD-F4-6463-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-F4-6463.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-F4-6463.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-F4-6463.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-F4-6463.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-F4-6463.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-F4-6463.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-F4-6463-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6463-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6463-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6463-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-F4-6463-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-F4-6463-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-F4-6463-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-F4-6463-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-F4-6463-01A-11D-1717-01.seg.txt TCGA-F4-6463-01 COAD-F4-6569-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6569.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6569.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6569.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6569.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6569.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6569.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-F4-6569-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6569-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6569-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6569-01A-23-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-F4-6569-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6569-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6569-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6569-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6569-01A-11D-1770-01.seg.txt TCGA-F4-6569-01 COAD-F4-6570-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6570.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6570.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-F4-6570.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6570.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6570.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-F4-6570.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-F4-6570-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6570-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6570-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6570-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-F4-6570-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6570-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6570-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6570-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-F4-6570-01A-11D-1770-01.seg.txt TCGA-F4-6570-01 COAD-F4-6703-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6703.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6703.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6703.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6703.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6703.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6703.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-F4-6703-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6703-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6703-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6703-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-F4-6703-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6703-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6703-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6703-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6703-01A-11D-1834-01.seg.txt TCGA-F4-6703-01 COAD-F4-6704-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6704.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6704.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6704.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6704-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6704-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6704-01A-11D-1834-01.seg.txt TCGA-F4-6704-01 COAD-F4-6805-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6805.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6805.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6805-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6805-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6805-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6805-01A-11D-1834-01.seg.txt TCGA-F4-6805-01 COAD-F4-6806-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6806.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6806.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6806.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6806.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6806.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6806.clin.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-F4-6806-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6806-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6806-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6806-01A-11D-1834-01.seg.txt 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/xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6807-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6807-01A-11D-1834-01.seg.txt TCGA-F4-6807-01 COAD-F4-6808-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6808.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6808.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6808.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6808.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6808.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6808.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-F4-6808-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6808-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6808-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6808-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-F4-6808-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6808-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6808-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6808-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6808-01A-11D-1834-01.seg.txt TCGA-F4-6808-01 COAD-F4-6809-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6809.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6809.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-F4-6809.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6809.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6809.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-F4-6809.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-F4-6809-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6809-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6809-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6809-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-F4-6809-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6809-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6809-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6809-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-F4-6809-01A-11D-1834-01.seg.txt TCGA-F4-6809-01 COAD-F4-6854-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6854.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6854.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6854.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6854.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6854.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6854.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-F4-6854-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6854-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6854-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6854-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-F4-6854-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6854-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6854-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6854-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6854-01A-11D-1923-01.seg.txt TCGA-F4-6854-01 COAD-F4-6855-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6855.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6855.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6855.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6855.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6855.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6855.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-F4-6855-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6855-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6855-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6855-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-F4-6855-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6855-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6855-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6855-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6855-01A-11D-1923-01.seg.txt TCGA-F4-6855-01 COAD-F4-6856-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6856.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6856.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-F4-6856.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6856.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6856.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-F4-6856.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-F4-6856-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6856-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-F4-6856-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F4-6856-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-F4-6856-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6856-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6856-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6856-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-F4-6856-01A-11D-1923-01.seg.txt TCGA-F4-6856-01 COAD-G4-6293-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6293.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6293.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6293.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6293.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6293.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6293.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6293-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6293-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6293-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6293-01A-23-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6293-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6293-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6293-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6293-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6293-01A-11D-1717-01.seg.txt TCGA-G4-6293-01 COAD-G4-6294-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6294.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6294.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6294.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6294.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6294.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6294.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6294-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6294-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6294-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6294-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6294-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6294-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6294-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6294-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6294-01A-11D-1770-01.seg.txt TCGA-G4-6294-01 COAD-G4-6295-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6295.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6295.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6295.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6295.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6295.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6295.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6295-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6295-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6295-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6295-01A-23-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6295-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6295-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6295-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6295-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6295-01A-11D-1717-01.seg.txt TCGA-G4-6295-01 COAD-G4-6297-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6297.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6297.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6297.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6297.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6297.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6297.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6297-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6297-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6297-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6297-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6297-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6297-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6297-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6297-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6297-01A-11D-1717-01.seg.txt TCGA-G4-6297-01 COAD-G4-6298-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6298.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6298.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6298.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6298.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6298.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6298.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6298-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6298-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6298-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6298-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6298-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6298-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6298-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6298-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6298-01A-11D-1717-01.seg.txt TCGA-G4-6298-01 COAD-G4-6299-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6299.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6299.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6299.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6299.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6299.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6299.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6299-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6299-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6299-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6299-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6299-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6299-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6299-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6299-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6299-01A-11D-1770-01.seg.txt TCGA-G4-6299-01 COAD-G4-6302-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6302.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6302.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6302.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6302.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6302.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6302.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6302-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6302-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6302-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6302-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6302-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6302-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6302-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6302-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6302-01A-11D-1717-01.seg.txt TCGA-G4-6302-01 COAD-G4-6303-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6303.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6303.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6303.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6303.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6303.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6303.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6303-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6303-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6303-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6303-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6303-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6303-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6303-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6303-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6303-01A-11D-1770-01.seg.txt TCGA-G4-6303-01 COAD-G4-6304-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-G4-6304.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-G4-6304.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.157.9.0/TCGA-G4-6304.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-G4-6304.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-G4-6304.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.157.10.0/TCGA-G4-6304.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.8.4.0/TCGA-G4-6304-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6304-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6304-01A-11H-1927-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6304-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.157.2002.0/TCGA-G4-6304-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-G4-6304-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-G4-6304-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-G4-6304-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.157.2002.0/TCGA-G4-6304-01A-11D-1923-01.seg.txt TCGA-G4-6304-01 COAD-G4-6306-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6306.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6306.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6306.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6306.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6306.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6306.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6306-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6306-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6306-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6306-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6306-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6306-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6306-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6306-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6306-01A-11D-1770-01.seg.txt TCGA-G4-6306-01 COAD-G4-6307-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6307.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6307.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6307.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6307.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6307.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6307.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6307-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6307-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6307-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6307-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6307-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6307-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6307-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6307-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6307-01A-11D-1717-01.seg.txt TCGA-G4-6307-01 COAD-G4-6309-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-G4-6309.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-G4-6309.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-G4-6309.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-G4-6309.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-G4-6309.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-G4-6309.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-G4-6309-01A-21D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6309-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6309-01A-21H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6309-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-G4-6309-01A-21D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-G4-6309-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-G4-6309-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-G4-6309-01A-21D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-G4-6309-01A-21D-1834-01.seg.txt TCGA-G4-6309-01 COAD-G4-6310-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6310.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6310.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6310.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6310.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6310.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6310.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6310-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6310-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6310-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6310-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6310-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6310-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6310-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6310-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6310-01A-11D-1717-01.seg.txt TCGA-G4-6310-01 COAD-G4-6311-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6311.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6311.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6311.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6311.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6311.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6311.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6311-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6311-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6311-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6311-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6311-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6311-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6311-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6311-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6311-01A-11D-1717-01.seg.txt TCGA-G4-6311-01 COAD-G4-6314-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6314.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6314.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6314.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6314.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6314.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6314.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6314-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6314-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6314-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6314-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6314-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6314-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6314-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6314-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6314-01A-11D-1717-01.seg.txt TCGA-G4-6314-01 COAD-G4-6315-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6315.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6315.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6315.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6315.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6315.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6315.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6315-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6315-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6315-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6315-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6315-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6315-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6315-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6315-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6315-01A-11D-1717-01.seg.txt TCGA-G4-6315-01 COAD-G4-6317-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6317.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6317.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6317.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6317.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6317.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6317.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6317-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6317-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6317-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6317-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6317-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6317-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6317-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6317-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6317-01A-11D-1717-01.seg.txt TCGA-G4-6317-01 COAD-G4-6320-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6320.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6320.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6320.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6320.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6320.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6320.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6320-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6320-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6320-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6320-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6320-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6320-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6320-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6320-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6320-01A-11D-1717-01.seg.txt TCGA-G4-6320-01 COAD-G4-6321-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6321.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6321.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6321.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6321.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6321.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6321.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6321-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6321-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6321-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6321-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6321-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6321-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6321-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6321-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6321-01A-11D-1717-01.seg.txt TCGA-G4-6321-01 COAD-G4-6322-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6322.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6322.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6322.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6322.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6322.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6322.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6322-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6322-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6322-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6322-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6322-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6322-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6322-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6322-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6322-01A-11D-1717-01.seg.txt TCGA-G4-6322-01 COAD-G4-6323-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6323.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6323.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.116.18.0/TCGA-G4-6323.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6323.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6323.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.116.19.0/TCGA-G4-6323.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.3.4.0/TCGA-G4-6323-01A-11D-1721-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6323-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6323-01A-11H-1722-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6323-01A-22-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.116.2002.0/TCGA-G4-6323-01A-11D-1717-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6323-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6323-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6323-01A-11D-1717-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.116.2002.0/TCGA-G4-6323-01A-11D-1717-01.seg.txt TCGA-G4-6323-01 COAD-G4-6586-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6586.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6586.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6586.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6586.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6586.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6586.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6586-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6586-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6586-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6586-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6586-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6586-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6586-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6586-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6586-01A-11D-1770-01.seg.txt TCGA-G4-6586-01 COAD-G4-6588-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6588.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6588.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6588.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6588.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6588.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6588.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6588-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6588-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6588-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6588-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6588-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6588-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6588-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6588-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6588-01A-11D-1770-01.seg.txt TCGA-G4-6588-01 COAD-G4-6625-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6625.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6625.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6625.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6625.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6625.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6625.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6625-01A-21D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6625-01A-21H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6625-01A-21H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6625-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6625-01A-21D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6625-01A-21D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6625-01A-21D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6625-01A-21D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6625-01A-21D-1770-01.seg.txt TCGA-G4-6625-01 COAD-G4-6626-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6626.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6626.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6626.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6626.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6626.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6626.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6626-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6626-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6626-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6626-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6626-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6626-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6626-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6626-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6626-01A-11D-1770-01.seg.txt TCGA-G4-6626-01 COAD-G4-6627-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6627.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6627.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.123.13.0/TCGA-G4-6627.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6627.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6627.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.123.14.0/TCGA-G4-6627.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.4.4.0/TCGA-G4-6627-01A-11D-1772-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6627-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6627-01A-11H-1773-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6627-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.123.2002.0/TCGA-G4-6627-01A-11D-1770-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6627-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6627-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6627-01A-11D-1770-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.123.2002.0/TCGA-G4-6627-01A-11D-1770-01.seg.txt TCGA-G4-6627-01 COAD-G4-6628-TP /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-G4-6628.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-G4-6628.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_COAD.bio.Level_1.138.15.0/TCGA-G4-6628.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-G4-6628.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-G4-6628.clin.txt /xchip/gdac_data/normalized/diced/coad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_COAD.bio.Level_1.138.16.0/TCGA-G4-6628.clin.txt /xchip/gdac_data/normalized/diced/coad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_COAD.HumanMethylation450.Level_3.6.4.0/TCGA-G4-6628-01A-11D-1837-05.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6628-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_COAD.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-G4-6628-01A-11H-1838-13.data.txt /xchip/gdac_data/normalized/diced/coad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_COAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G4-6628-01A-23-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_2.138.2002.0/TCGA-G4-6628-01A-11D-1834-01.birdseed.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-G4-6628-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-G4-6628-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-G4-6628-01A-11D-1834-01.seg.txt /xchip/gdac_data/normalized/diced/coad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_COAD.Genome_Wide_SNP_6.Level_3.138.2002.0/TCGA-G4-6628-01A-11D-1834-01.seg.txt TCGA-G4-6628-01 GBM-02-0001-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0001.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0001.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0001.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0001.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0001-01C-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0001-01C-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0001-01C-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0001-01C-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0001-01C-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0001-01C-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0001-01C-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0001-01C-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0001-01C-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0001-01C-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0001-01C-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0001-01C-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0001-01C-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0001-01C-01D-0184-06.seg.txt TCGA-02-0001-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0001-01C-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0001-01C-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0001-01C-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0001-01C-01R-0177-01.data.txt GBM-02-0003-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0003.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0003.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0003.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0003.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0003-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0003-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0003-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0003-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0003-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0003-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0003-01A-01T-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-02-0003-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0003-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0003-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0003-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0003-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0003-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0003-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0003-01A-01D-0184-06.seg.txt TCGA-02-0003-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-0003-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-0003-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0003-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0003-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0003-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0003-01A-01R-0177-01.data.txt GBM-02-0004-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0004.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0004.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0004.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0004.clin.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0004-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0004-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0004-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0004-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-02-0004-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0004-01A-01G-0293-01.birdseed.txt TCGA-02-0004 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0004-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0004-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0004-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0004-01A-01R-0298-01.data.txt GBM-02-0006-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0006.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0006.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0006.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0006.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0006-01B-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0006-01B-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0006-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0006-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0006-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0006-01B-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0006-01B-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0006-01B-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0006-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0006-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0006-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0006-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0006-01B-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0006-01B-01D-0184-06.seg.txt TCGA-02-0006-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0006-01B-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0006-01B-01R-0179-07.data.txt GBM-02-0007-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0007.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0007.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0007.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0007.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0007-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0007-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0007-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0007-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0007-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0007-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0007-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0007-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0007-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0007-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0007-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0007-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0007-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0007-01A-01D-0184-06.seg.txt TCGA-02-0007-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0007-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0007-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0007-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0007-01A-01R-0177-01.data.txt GBM-02-0009-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0009.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0009.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0009.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0009.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0009-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0009-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0009-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0009-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0009-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0009-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0009-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0009-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0009-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0009-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0009-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0009-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0009-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0009-01A-01D-0184-06.seg.txt TCGA-02-0009-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0009-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0009-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0009-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0009-01A-01R-0177-01.data.txt GBM-02-0010-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0010.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0010.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0010.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0010.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0010-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0010-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0010-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0010-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0010-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0010-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0010-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0010-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0010-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0010-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0010-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0010-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0010-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0010-01A-01D-0184-06.seg.txt TCGA-02-0010-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0010-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0010-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0010-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0010-01A-01R-0177-01.data.txt GBM-02-0011-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0011.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0011.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0011.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0011.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0011-01B-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0011-01B-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0011-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0011-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0011-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0011-01B-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0011-01B-01T-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-02-0011-01B-11-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0011-01B-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0011-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0011-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0011-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0011-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0011-01B-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0011-01B-01D-0184-06.seg.txt TCGA-02-0011-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0011-01B-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0011-01B-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0011-01B-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0011-01B-01R-0177-01.data.txt GBM-02-0014-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0014.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0014.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0014.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0014.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0014-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0014-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0014-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0014-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0014-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0014-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0014-01A-01T-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-02-0014-01A-11-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0014-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0014-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0014-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0014-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0014-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0014-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0014-01A-01D-0184-06.seg.txt TCGA-02-0014-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0014-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0014-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0014-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0014-01A-01R-0177-01.data.txt GBM-02-0015-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0015.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0015.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0015.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0015.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0015-01A-01G-0326-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0015-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0015-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0015-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0015-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0015-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0015-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0015-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0015-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0015-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0015-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0015-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0015-01A-01G-0295-06.seg.txt TCGA-02-0015-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0015-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0015-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0015-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0015-01A-01R-0298-01.data.txt GBM-02-0016-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0016.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0016.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0016.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0016.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0016-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0016-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0016-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0016-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0016-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0016-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0016-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0016-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0016-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0016-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0016-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0016-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0016-01A-01G-0295-06.seg.txt TCGA-02-0016-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0016-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0016-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0016-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0016-01A-01R-0298-01.data.txt GBM-02-0021-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0021.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0021.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0021.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0021.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0021-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0021-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0021-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0021-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0021-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0021-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0021-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0021-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0021-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0021-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0021-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0021-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0021-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0021-01A-01D-0184-06.seg.txt TCGA-02-0021-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0021-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0021-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0021-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0021-01A-01R-0177-01.data.txt GBM-02-0023-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0023.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0023.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0023.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0023.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0023-01B-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0023-01B-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0023-01B-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0023-01B-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0023-01B-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0023-01B-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0023-01B-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0023-01B-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0023-01B-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0023-01B-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0023-01B-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0023-01B-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0023-01B-01G-0295-06.seg.txt TCGA-02-0023-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0023-01B-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0023-01B-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0023-01B-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0023-01B-01R-0298-01.data.txt GBM-02-0024-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0024.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0024.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0024.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0024.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0024-01B-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0024-01B-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0024-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0024-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0024-01B-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0024-01B-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0024-01B-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0024-01B-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0024-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0024-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0024-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0024-01B-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0024-01B-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0024-01B-01D-0184-06.seg.txt TCGA-02-0024-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0024-01B-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0024-01B-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0024-01B-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0024-01B-01R-0177-01.data.txt GBM-02-0025-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0025.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0025.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0025.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0025.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0025-01A-01G-0326-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0025-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0025-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0025-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0025-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0025-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0025-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0025-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0025-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0025-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0025-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0025-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0025-01A-01G-0295-06.seg.txt TCGA-02-0025-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0025-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0025-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0025-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0025-01A-01R-0298-01.data.txt GBM-02-0026-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0026.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0026.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0026.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0026.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0026-01B-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0026-01B-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0026-01B-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0026-01B-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0026-01B-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0026-01B-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0026-01B-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0026-01B-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0026-01B-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0026-01B-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0026-01B-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0026-01B-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0026-01B-01G-0295-06.seg.txt TCGA-02-0026-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0026-01B-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0026-01B-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0026-01B-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0026-01B-01R-0298-01.data.txt GBM-02-0027-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0027.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0027.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0027.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0027.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0027-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0027-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0027-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0027-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0027-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0027-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0027-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0027-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0027-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0027-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0027-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0027-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0027-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0027-01A-01D-0184-06.seg.txt TCGA-02-0027-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0027-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0027-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0027-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0027-01A-01R-0177-01.data.txt GBM-02-0028-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0028.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0028.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0028.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0028.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0028-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0028-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0028-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0028-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0028-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0028-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0028-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0028-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0028-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0028-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0028-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0028-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0028-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0028-01A-01D-0184-06.seg.txt TCGA-02-0028-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0028-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0028-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0028-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0028-01A-01R-0177-01.data.txt GBM-02-0033-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0033.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0033.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0033.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0033.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0033-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0033-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0033-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0033-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0033-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0033-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0033-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0033-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0033-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0033-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0033-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0033-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0033-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0033-01A-01D-0184-06.seg.txt TCGA-02-0033-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-0033-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-0033-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0033-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0033-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0033-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0033-01A-01R-0177-01.data.txt GBM-02-0034-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0034.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0034.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0034.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0034.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0034-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0034-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0034-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0034-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0034-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0034-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0034-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0034-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0034-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0034-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0034-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0034-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0034-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0034-01A-01D-0184-06.seg.txt TCGA-02-0034-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0034-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0034-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0034-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0034-01A-01R-0177-01.data.txt GBM-02-0037-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0037.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0037.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0037.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0037.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0037-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0037-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0037-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0037-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0037-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0037-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0037-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0037-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0037-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0037-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0037-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0037-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0037-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0037-01A-01D-0184-06.seg.txt TCGA-02-0037-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0037-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0037-01A-01R-0179-07.data.txt GBM-02-0038-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0038.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0038.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0038.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0038.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0038-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0038-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0038-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0038-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0038-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0038-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0038-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0038-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0038-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0038-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0038-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0038-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0038-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0038-01A-01D-0184-06.seg.txt TCGA-02-0038-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0038-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0038-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0038-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0038-01A-01R-0177-01.data.txt GBM-02-0039-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0039.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0039.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0039.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0039.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0039-01A-01G-0326-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0039-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0039-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0039-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0039-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0039-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0039-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0039-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0039-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0039-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0039-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0039-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0039-01A-01G-0295-06.seg.txt TCGA-02-0039-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0039-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0039-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0039-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0039-01A-01R-0298-01.data.txt GBM-02-0043-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0043.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0043.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0043.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0043.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0043-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0043-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0043-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0043-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0043-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0043-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0043-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0043-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0043-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0043-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0043-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0043-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0043-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0043-01A-01D-0184-06.seg.txt TCGA-02-0043-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0043-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0043-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0043-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0043-01A-01R-0177-01.data.txt GBM-02-0046-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0046.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0046.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0046.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0046.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0046-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0046-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0046-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0046-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0046-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0046-01A-01D-0186-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0046-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0046-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0046-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0046-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0046-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0046-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0046-01A-01D-0184-06.seg.txt TCGA-02-0046-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0046-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0046-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0046-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0046-01A-01R-0177-01.data.txt GBM-02-0047-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0047.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0047.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0047.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-0047-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-0047-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-0047-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0047-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0047-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0047-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0047-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0047-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0047-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0047-01A-01D-0184-06.seg.txt TCGA-02-0047-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-0047-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-0047-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0047-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0047-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0047-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0047-01A-01R-0177-01.data.txt GBM-02-0048-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0048.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0048.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0048.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0048.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0048-01A-01G-0326-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0048-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0048-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0048-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0048-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0048-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0048-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0048-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0048-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0048-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0048-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0048-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0048-01A-01G-0295-06.seg.txt TCGA-02-0048-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0048-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0048-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0048-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0048-01A-01R-0298-01.data.txt GBM-02-0051-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0051.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0051.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0051.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0051.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0051-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0051-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0051-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0051-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0051-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0051-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0051-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0051-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0051-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0051-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0051-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0051-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0051-01A-01G-0295-06.seg.txt TCGA-02-0051-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0051-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0051-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0051-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0051-01A-01R-0298-01.data.txt GBM-02-0052-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0052.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0052.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0052.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0052.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0052-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0052-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0052-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0052-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0052-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0052-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0052-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0052-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0052-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0052-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0052-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0052-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0052-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0052-01A-01D-0184-06.seg.txt TCGA-02-0052-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0052-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0052-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0052-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0052-01A-01R-0177-01.data.txt GBM-02-0054-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0054.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0054.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0054.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0054.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0054-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0054-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0054-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0054-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0054-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0054-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0054-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0054-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0054-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0054-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0054-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0054-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0054-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0054-01A-01D-0184-06.seg.txt TCGA-02-0054-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0054-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0054-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0054-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0054-01A-01R-0177-01.data.txt GBM-02-0055-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0055.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0055.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0055.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0055.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0055-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0055-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0055-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0055-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0055-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0055-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0055-01A-01T-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-0055-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-0055-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-0055-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-0055-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-0055-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0055-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0055-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0055-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0055-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0055-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0055-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0055-01A-01D-0184-06.seg.txt TCGA-02-0055-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-0055-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-0055-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0055-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0055-01A-01R-0179-07.data.txt GBM-02-0057-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0057.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0057.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0057.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0057.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0057-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0057-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0057-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0057-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0057-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0057-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0057-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0057-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0057-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0057-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0057-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0057-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0057-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0057-01A-01D-0184-06.seg.txt TCGA-02-0057-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0057-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0057-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0057-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0057-01A-01R-0177-01.data.txt GBM-02-0058-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0058.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0058.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0058.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0058.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0058-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0058-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0058-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0058-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0058-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0058-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0058-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0058-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0058-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0058-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0058-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0058-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0058-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0058-01A-01D-0184-06.seg.txt TCGA-02-0058-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0058-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0058-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0058-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0058-01A-01R-0177-01.data.txt GBM-02-0059-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0059.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0059.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0059.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0059.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0059-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0059-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0059-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0059-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0059-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0059-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0059-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0059-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0059-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0059-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0059-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0059-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0059-01A-01G-0295-06.seg.txt TCGA-02-0059-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0059-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0059-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0059-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0059-01A-01R-0298-01.data.txt GBM-02-0060-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0060.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.1.46.0/TCGA-02-0060.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0060.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.1.47.0/TCGA-02-0060.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.1.6.0/TCGA-02-0060-01A-01D-0185-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.1.5.0/TCGA-02-0060-01A-01D-0183-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.1.2.0/TCGA-02-0060-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0060-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.1.2.0/TCGA-02-0060-01A-01R-0178-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.1.5.0/TCGA-02-0060-01A-01D-0186-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0060-01A-01T-0179-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.1.2002.0/TCGA-02-0060-01A-01D-0182-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0060-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0060-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0060-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.1.2002.0/TCGA-02-0060-01A-01D-0182-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0060-01A-01D-0184-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0060-01A-01D-0184-06.seg.txt TCGA-02-0060-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0060-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0060-01A-01R-0179-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.1.1007.0/TCGA-02-0060-01A-01R-0177-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.1.1007.0/TCGA-02-0060-01A-01R-0177-01.data.txt GBM-02-0064-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0064.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0064.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0064.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0064.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0064-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0064-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0064-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0064-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0064-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0064-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0064-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0064-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0064-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0064-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0064-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0064-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0064-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0064-01A-01D-0197-06.seg.txt TCGA-02-0064-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0064-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0064-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0064-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0064-01A-01R-0202-01.data.txt GBM-02-0068-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0068.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0068.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0068.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0068.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0068-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0068-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0068-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0068-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0068-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0068-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-02-0068-01A-11-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0068-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0068-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0068-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0068-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0068-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0068-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0068-01A-01G-0295-06.seg.txt TCGA-02-0068-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0068-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0068-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0068-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0068-01A-01R-0298-01.data.txt GBM-02-0069-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0069.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0069.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0069.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0069.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0069-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0069-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0069-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0069-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0069-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0069-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0069-01A-01T-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-02-0069-01A-11-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0069-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0069-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0069-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0069-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0069-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0069-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0069-01A-01D-0197-06.seg.txt TCGA-02-0069-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0069-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0069-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0069-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0069-01A-01R-0202-01.data.txt GBM-02-0070-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0070.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0070.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0070.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0070.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0070-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0070-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0070-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0070-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0070-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0070-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0070-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0070-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0070-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0070-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0070-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0070-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0070-01A-01G-0295-06.seg.txt TCGA-02-0070-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0070-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0070-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0070-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0070-01A-01R-0298-01.data.txt GBM-02-0071-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0071.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0071.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0071.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0071.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0071-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0071-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0071-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0071-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0071-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0071-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0071-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0071-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0071-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0071-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0071-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0071-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0071-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0071-01A-01D-0197-06.seg.txt TCGA-02-0071-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0071-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0071-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0071-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0071-01A-01R-0202-01.data.txt GBM-02-0074-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0074.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0074.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0074.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0074.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0074-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0074-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0074-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0074-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0074-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0074-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0074-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0074-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0074-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0074-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0074-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0074-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0074-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0074-01A-01D-0197-06.seg.txt TCGA-02-0074-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0074-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0074-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0074-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0074-01A-01R-0202-01.data.txt GBM-02-0075-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0075.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0075.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0075.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0075.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0075-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0075-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0075-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0075-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0075-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0075-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0075-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0075-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0075-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0075-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0075-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0075-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0075-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0075-01A-01D-0197-06.seg.txt TCGA-02-0075-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0075-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0075-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0075-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0075-01A-01R-0202-01.data.txt GBM-02-0079-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-02-0079.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-02-0079.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-02-0079.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-02-0079.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-02-0079-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-02-0079-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-02-0079-01A-03R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-02-0079-01A-03R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-02-0079-01A-03R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0079-01A-01T-0309-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-02-0079-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-02-0079-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-02-0079-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-02-0079-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-02-0079-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0079-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0079-01A-01D-0312-06.seg.txt TCGA-02-0079-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0079-01A-03R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0079-01A-03R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-02-0079-01A-03R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-02-0079-01A-03R-0306-01.data.txt GBM-02-0080-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0080.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0080.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0080.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0080.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0080-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0080-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0080-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0080-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0080-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0080-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0080-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0080-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0080-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0080-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0080-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0080-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0080-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0080-01A-01D-0197-06.seg.txt TCGA-02-0080-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0080-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0080-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0080-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0080-01A-01R-0202-01.data.txt GBM-02-0083-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0083.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0083.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0083.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0083.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0083-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0083-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0083-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0083-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0083-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0083-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0083-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0083-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0083-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0083-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0083-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0083-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0083-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0083-01A-01D-0197-06.seg.txt TCGA-02-0083-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0083-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0083-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0083-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0083-01A-01R-0202-01.data.txt GBM-02-0084-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-02-0084.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-02-0084.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-02-0084.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-02-0084.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-02-0084-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-02-0084-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-02-0084-01A-03R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-02-0084-01A-03R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-02-0084-01A-03R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0084-01A-01T-0309-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-02-0084-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-02-0084-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-02-0084-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-02-0084-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-02-0084-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0084-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0084-01A-01D-0312-06.seg.txt TCGA-02-0084-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0084-01A-03R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0084-01A-03R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-02-0084-01A-03R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-02-0084-01A-03R-0306-01.data.txt GBM-02-0085-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0085.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0085.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0085.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0085.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0085-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0085-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0085-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0085-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0085-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0085-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0085-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0085-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0085-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0085-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0085-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0085-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0085-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0085-01A-01D-0197-06.seg.txt TCGA-02-0085-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0085-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0085-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0085-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0085-01A-01R-0202-01.data.txt GBM-02-0086-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0086.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0086.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0086.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0086.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0086-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0086-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0086-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0086-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0086-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0086-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0086-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0086-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0086-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0086-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0086-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0086-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0086-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0086-01A-01D-0197-06.seg.txt TCGA-02-0086-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0086-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0086-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0086-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0086-01A-01R-0202-01.data.txt GBM-02-0087-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0087.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0087.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0087.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0087.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0087-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0087-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0087-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0087-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0087-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0087-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0087-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0087-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0087-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0087-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0087-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0087-01A-01D-0277-06.seg.txt TCGA-02-0087-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0087-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0087-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0087-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0087-01A-01R-0280-01.data.txt GBM-02-0089-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0089.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0089.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0089.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0089.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0089-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0089-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0089-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0089-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0089-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0089-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0089-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0089-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0089-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0089-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0089-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0089-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0089-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0089-01A-01D-0197-06.seg.txt TCGA-02-0089-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0089-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0089-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0089-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0089-01A-01R-0202-01.data.txt GBM-02-0099-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0099.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0099.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0099.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0099.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0099-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0099-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0099-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0099-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0099-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0099-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0099-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0099-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0099-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0099-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0099-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0099-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0099-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0099-01A-01D-0197-06.seg.txt TCGA-02-0099-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0099-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0099-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0099-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0099-01A-01R-0202-01.data.txt GBM-02-0102-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0102.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0102.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0102.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0102.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0102-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0102-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0102-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0102-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0102-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0102-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0102-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0102-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0102-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0102-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0102-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0102-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0102-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0102-01A-01D-0197-06.seg.txt TCGA-02-0102-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0102-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0102-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0102-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0102-01A-01R-0202-01.data.txt GBM-02-0104-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0104.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-02-0104.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0104.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-02-0104.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-02-0104-01A-01G-0326-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-02-0104-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-02-0104-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0104-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-02-0104-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0104-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-02-0104-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0104-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0104-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0104-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-02-0104-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0104-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0104-01A-01G-0295-06.seg.txt TCGA-02-0104-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0104-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0104-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-02-0104-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-02-0104-01A-01R-0298-01.data.txt GBM-02-0106-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0106.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0106.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0106.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0106.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0106-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0106-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0106-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0106-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0106-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0106-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0106-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0106-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0106-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0106-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0106-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0106-01A-01D-0277-06.seg.txt TCGA-02-0106-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0106-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0106-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0106-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0106-01A-01R-0280-01.data.txt GBM-02-0107-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0107.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0107.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0107.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0107.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0107-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0107-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0107-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0107-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0107-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0107-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0107-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0107-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0107-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0107-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0107-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0107-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0107-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0107-01A-01D-0197-06.seg.txt TCGA-02-0107-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0107-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0107-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0107-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0107-01A-01R-0202-01.data.txt GBM-02-0111-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0111.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0111.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0111.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0111.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0111-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0111-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0111-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0111-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0111-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0111-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0111-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0111-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0111-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0111-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0111-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0111-01A-01D-0277-06.seg.txt TCGA-02-0111-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0111-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0111-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0111-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0111-01A-01R-0280-01.data.txt GBM-02-0113-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0113.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0113.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0113.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0113.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0113-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0113-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0113-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0113-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0113-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0113-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0113-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0113-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0113-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0113-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0113-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0113-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0113-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0113-01A-01D-0197-06.seg.txt TCGA-02-0113-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0113-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0113-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0113-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0113-01A-01R-0202-01.data.txt GBM-02-0114-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0114.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0114.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0114.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0114.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0114-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0114-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0114-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0114-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0114-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0114-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0114-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0114-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0114-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0114-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0114-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0114-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0114-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0114-01A-01D-0197-06.seg.txt TCGA-02-0114-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0114-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0114-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0114-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0114-01A-01R-0202-01.data.txt GBM-02-0115-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0115.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0115.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0115.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0115.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0115-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0115-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0115-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0115-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0115-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0115-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0115-01A-01T-0195-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0115-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0115-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0115-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0115-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0115-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0115-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0115-01A-01D-0197-06.seg.txt TCGA-02-0115-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0115-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0115-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0115-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0115-01A-01R-0202-01.data.txt GBM-02-0116-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0116.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.2.44.0/TCGA-02-0116.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0116.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.2.45.0/TCGA-02-0116.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.2.5.0/TCGA-02-0116-01A-01D-0198-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.2.4.0/TCGA-02-0116-01A-01D-0196-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.2.2.0/TCGA-02-0116-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0116-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.2.2.0/TCGA-02-0116-01A-01R-0194-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.4.5.0/TCGA-02-0116-01A-01D-0199-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0116-01A-01T-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-02-0116-01A-11-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.2.2002.0/TCGA-02-0116-01A-01D-0193-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0116-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0116-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0116-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.2.2002.0/TCGA-02-0116-01A-01D-0193-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0116-01A-01D-0197-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.2.4.0/TCGA-02-0116-01A-01D-0197-06.seg.txt TCGA-02-0116-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-02-0116-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-02-0116-01A-01R-0195-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.2.1007.0/TCGA-02-0116-01A-01R-0202-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.2.1007.0/TCGA-02-0116-01A-01R-0202-01.data.txt GBM-02-0250-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0250.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0250.clin.txt TP TCGA-02-0250 GBM-02-0258-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0258.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0258.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0258.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0258.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0258-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0258-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0258-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0258-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0258-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0258-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0258-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0258-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0258-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0258-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0258-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0258-01A-01D-0277-06.seg.txt TCGA-02-0258-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0258-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0258-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0258-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0258-01A-01R-0280-01.data.txt GBM-02-0260-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0260.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0260.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0260.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0260.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0260-01A-03D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0260-01A-03D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0260-01A-03R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0260-01A-03R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0260-01A-03R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0260-01A-03T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0260-01A-03D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0260-01A-03D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0260-01A-03D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0260-01A-03D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0260-01A-03D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0260-01A-03D-0277-06.seg.txt TCGA-02-0260-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0260-01A-03R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0260-01A-03R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0260-01A-03R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0260-01A-03R-0280-01.data.txt GBM-02-0266-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0266.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0266.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0266.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0266.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0266-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0266-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0266-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0266-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0266-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0266-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0266-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0266-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0266-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0266-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0266-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0266-01A-01D-0277-06.seg.txt TCGA-02-0266-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0266-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0266-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0266-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0266-01A-01R-0280-01.data.txt GBM-02-0269-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0269.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0269.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0269.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0269.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0269-01B-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0269-01B-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0269-01B-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0269-01B-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0269-01B-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0269-01B-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0269-01B-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0269-01B-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0269-01B-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0269-01B-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0269-01B-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0269-01B-01D-0277-06.seg.txt TCGA-02-0269-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0269-01B-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0269-01B-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0269-01B-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0269-01B-01R-0280-01.data.txt GBM-02-0271-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0271.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0271.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0271.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0271.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0271-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0271-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0271-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0271-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0271-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0271-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0271-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0271-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0271-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0271-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0271-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0271-01A-01D-0277-06.seg.txt TCGA-02-0271-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0271-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0271-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0271-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0271-01A-01R-0280-01.data.txt GBM-02-0281-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0281.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0281.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0281-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0281-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0281-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0281-01A-01D-0277-06.seg.txt TCGA-02-0281-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0281-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0281-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0281-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0281-01A-01R-0280-01.data.txt GBM-02-0285-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0285.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0285-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0285-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0285-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0285-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0285-01A-01D-0277-06.seg.txt TCGA-02-0285-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0285-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0285-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0285-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0285-01A-01R-0280-01.data.txt GBM-02-0289-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0289.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0289.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0289.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0289.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0289-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0289-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0289-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0289-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0289-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0289-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0289-01A-01D-0277-06.seg.txt TCGA-02-0289-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0289-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0289-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0289-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0289-01A-01R-0280-01.data.txt GBM-02-0290-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0290.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0290.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0290.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0290.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0290-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0290-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0290-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0290-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0290-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0290-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0290-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0290-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0290-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0290-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0290-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0290-01A-01D-0277-06.seg.txt TCGA-02-0290-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0290-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0290-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0290-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0290-01A-01R-0280-01.data.txt GBM-02-0317-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0317.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0317.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0317.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0317.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0317-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0317-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0317-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0317-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0317-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0317-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0317-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0317-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0317-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0317-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0317-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0317-01A-01D-0277-06.seg.txt TCGA-02-0317-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0317-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0317-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0317-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0317-01A-01R-0280-01.data.txt GBM-02-0321-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0321.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0321.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0321.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0321.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0321-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0321-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0321-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0321-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0321-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0321-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0321-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0321-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0321-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0321-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0321-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0321-01A-01D-0277-06.seg.txt TCGA-02-0321-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0321-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0321-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0321-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0321-01A-01R-0280-01.data.txt GBM-02-0324-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0324.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0324.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0324.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0324.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0324-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0324-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0324-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0324-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0324-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0324-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0324-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0324-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0324-01A-01D-0277-06.seg.txt TCGA-02-0324-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0324-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0324-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0324-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0324-01A-01R-0280-01.data.txt GBM-02-0325-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0325.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0325.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0325.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0325.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0325-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0325-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0325-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0325-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0325-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0325-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0325-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0325-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0325-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0325-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0325-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0325-01A-01D-0277-06.seg.txt TCGA-02-0325-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0325-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0325-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0325-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0325-01A-01R-0280-01.data.txt GBM-02-0326-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0326.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0326.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0326.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0326.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0326-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0326-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0326-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0326-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0326-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0326-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0326-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0326-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0326-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0326-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0326-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0326-01A-01D-0277-06.seg.txt TCGA-02-0326-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0326-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0326-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0326-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0326-01A-01R-0280-01.data.txt GBM-02-0329-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0329.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0329.clin.txt TP TCGA-02-0329 GBM-02-0330-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0330.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0330.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0330.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0330.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0330-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0330-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0330-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0330-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0330-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0330-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0330-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0330-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0330-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0330-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0330-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0330-01A-01D-0277-06.seg.txt TCGA-02-0330-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0330-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0330-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0330-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0330-01A-01R-0280-01.data.txt GBM-02-0332-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0332.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0332.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0332.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0332.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0332-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0332-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0332-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0332-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0332-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0332-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0332-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0332-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0332-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0332-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0332-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0332-01A-01D-0277-06.seg.txt TCGA-02-0332-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0332-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0332-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0332-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0332-01A-01R-0280-01.data.txt GBM-02-0333-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0333.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0333.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0333.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0333.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0333-01A-02D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0333-01A-02D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0333-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0333-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0333-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0333-01A-02T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0333-01A-02D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0333-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0333-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0333-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0333-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0333-01A-02D-0277-06.seg.txt TCGA-02-0333-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0333-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0333-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0333-01A-02R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0333-01A-02R-0280-01.data.txt GBM-02-0336-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0336.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0336.clin.txt TP TCGA-02-0336 GBM-02-0337-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0337.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0337.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0337.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0337.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0337-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0337-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0337-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0337-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0337-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0337-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0337-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0337-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0337-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0337-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0337-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0337-01A-01D-0277-06.seg.txt TCGA-02-0337-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0337-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0337-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0337-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0337-01A-01R-0280-01.data.txt GBM-02-0338-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0338.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0338.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0338.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0338.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0338-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0338-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0338-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0338-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0338-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0338-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0338-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0338-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0338-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0338-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0338-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0338-01A-01D-0277-06.seg.txt TCGA-02-0338-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0338-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0338-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0338-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0338-01A-01R-0280-01.data.txt GBM-02-0339-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0339.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0339.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0339.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0339.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0339-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0339-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0339-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0339-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0339-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0339-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0339-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0339-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0339-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0339-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0339-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0339-01A-01D-0277-06.seg.txt TCGA-02-0339-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0339-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0339-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0339-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0339-01A-01R-0280-01.data.txt GBM-02-0422-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0422.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0422.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0422.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0422.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0422-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0422-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0422-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0422-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0422-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0422-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0422-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0422-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0422-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0422-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0422-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0422-01A-01D-0277-06.seg.txt TCGA-02-0422-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0422-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0422-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0422-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0422-01A-01R-0280-01.data.txt GBM-02-0430-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0430.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0430.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0430.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0430.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0430-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0430-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0430-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0430-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0430-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0430-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0430-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0430-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0430-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0430-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0430-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0430-01A-01D-0277-06.seg.txt TCGA-02-0430-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0430-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0430-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0430-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0430-01A-01R-0280-01.data.txt GBM-02-0432-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0432.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0432.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0432.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0432.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0432-01A-02D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0432-01A-02D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0432-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0432-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0432-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0432-01A-02T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0432-01A-02D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0432-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0432-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0432-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0432-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0432-01A-02D-0277-06.seg.txt TCGA-02-0432-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0432-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0432-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0432-01A-02R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0432-01A-02R-0280-01.data.txt GBM-02-0439-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0439.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0439.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0439.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0439.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0439-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0439-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0439-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0439-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0439-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0439-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0439-01A-01D-0275-01.birdseed.txt TCGA-02-0439 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0439-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0439-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0439-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0439-01A-01R-0280-01.data.txt GBM-02-0440-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0440.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0440.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0440.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0440.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0440-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0440-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0440-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0440-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0440-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0440-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0440-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0440-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0440-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0440-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0440-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0440-01A-01D-0277-06.seg.txt TCGA-02-0440-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0440-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0440-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0440-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0440-01A-01R-0280-01.data.txt GBM-02-0446-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0446.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0446.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0446.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0446.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0446-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0446-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0446-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0446-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0446-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0446-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0446-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0446-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0446-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0446-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0446-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0446-01A-01D-0277-06.seg.txt TCGA-02-0446-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0446-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0446-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0446-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0446-01A-01R-0280-01.data.txt GBM-02-0451-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0451.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0451.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0451.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0451.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0451-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0451-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0451-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0451-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0451-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0451-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0451-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0451-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0451-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0451-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0451-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-02-0451-01A-01D-0277-06.seg.txt TCGA-02-0451-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0451-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0451-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0451-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0451-01A-01R-0280-01.data.txt GBM-02-0456-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0456.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-02-0456.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0456.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-02-0456.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-02-0456-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-02-0456-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-02-0456-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0456-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-02-0456-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-0456-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-02-0456-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0456-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0456-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0456-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-02-0456-01A-01D-0275-01.seg.txt TCGA-02-0456-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-0456-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-0456-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-02-0456-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-02-0456-01A-01R-0280-01.data.txt GBM-02-2466-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-02-2466.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-02-2466.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-02-2466.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-02-2466.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-02-2466-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-02-2466-01A-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-02-2466-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-02-2466-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-02-2466-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-02-2466-01A-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-2466-01A-01T-0792-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-02-2466-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2466-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2466-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2466-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2466-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-02-2466-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-02-2466-01A-01D-0786-06.seg.txt TCGA-02-2466-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-2466-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-2466-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-02-2466-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-02-2466-01A-01R-0789-01.data.txt GBM-02-2470-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-02-2470.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-02-2470.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-02-2470.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-02-2470.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-02-2470-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-02-2470-01A-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-02-2470-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-02-2470-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-02-2470-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-02-2470-01A-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-02-2470-01A-01T-0792-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-02-2470-01A-22-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-02-2470-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2470-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2470-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2470-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2470-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-02-2470-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-02-2470-01A-01D-0786-06.seg.txt TCGA-02-2470-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-2470-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-2470-01.maf.txt 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/xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-02-2483.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-02-2483.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-02-2483.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-02-2483-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-02-2483-01A-01D-0787-02.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-02-2486-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-02-2486-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2486-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2486-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2486-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-02-2486-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-02-2486-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-02-2486-01A-01D-0786-06.seg.txt TCGA-02-2486-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-2486-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-02-2486-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-02-2486-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-02-2486-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-02-2486-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-02-2486-01A-01R-0789-01.data.txt GBM-06-0119-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0119.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0119.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0119-01A-08D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0119-01A-08D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0119-01A-08D-0218-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0119-01A-08D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0119-01A-08D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0119-01A-08D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0119-01A-08D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0119-01A-08D-0214-01.seg.txt TCGA-06-0119-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0119-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0119-01.maf.txt GBM-06-0121-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0121.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0121.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0121-01A-04D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0121-01A-04D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0121-01A-04D-0218-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0121-01A-04D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0121-01A-04D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0121-01A-04D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0121-01A-04D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0121-01A-04D-0214-01.seg.txt TCGA-06-0121-01 GBM-06-0122-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0122.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0122.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0122.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0122.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0122-01A-01D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0122-01A-01D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0122-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0122-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0122-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0122-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0122-01A-01T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0122-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0122-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0122-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0122-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0122-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0122-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0122-01A-01D-0216-06.seg.txt TCGA-06-0122-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0122-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0122-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0122-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0122-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0122-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0122-01A-01R-0219-01.data.txt GBM-06-0124-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0124.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0124.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0124.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0124.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0124-01A-01D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0124-01A-01D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0124-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0124-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0124-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0124-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0124-01A-01T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0124-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0124-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0124-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0124-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0124-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0124-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0124-01A-01D-0216-06.seg.txt TCGA-06-0124-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0124-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0124-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0124-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0124-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0124-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0124-01A-01R-0219-01.data.txt GBM-06-0125-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0125.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0125.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0125.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0125.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0125-01A-01D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0125-01A-01D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0125-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0125-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0125-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0125-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0125-01A-01T-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-0125-01A-03-1900-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0125-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0125-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0125-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0125-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0125-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0125-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0125-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0125-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0125-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0125-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0125-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0125-01A-01D-0216-06.seg.txt TCGA-06-0125-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0125-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0125-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0125-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0125-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0125-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0125-01A-01R-0219-01.data.txt GBM-06-0126-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0126.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0126.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0126.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0126.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0126-01A-01D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0126-01A-01D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0126-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0126-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0126-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0126-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0126-01A-01T-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-0126-01A-03-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0126-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0126-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0126-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0126-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0126-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0126-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0126-01A-01D-0216-06.seg.txt TCGA-06-0126-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0126-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0126-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0126-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0126-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0126-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0126-01A-01R-0219-01.data.txt GBM-06-0127-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0127.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0127.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-06-0127.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-06-0127.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-06-0127-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-06-0127-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-06-0127-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-06-0127-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-06-0127-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0127-01A-01T-0309-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-06-0127-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0127-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0127-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0127-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0127-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0127-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0127-01A-01D-0312-06.seg.txt TCGA-06-0127-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0127-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0127-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-06-0127-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-06-0127-01A-01R-0306-01.data.txt GBM-06-0128-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0128.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0128.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0128.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0128-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0128-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0128-01A-01T-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-0128-01A-11-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0128-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0128-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0128-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0128-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0128-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0128-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0128-01A-01D-0216-06.seg.txt TCGA-06-0128-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0128-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0128-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0128-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0128-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0128-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0128-01A-01R-0219-01.data.txt GBM-06-0129-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0129.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0129-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0129-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0129-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0129-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0129-01A-01T-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-0129-01A-03-1900-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0129-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0129-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0129-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0129-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0129-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0129-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0129-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0129-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0129-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0129-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0129-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0129-01A-01D-0216-06.seg.txt TCGA-06-0129-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0129-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0129-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0129-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0129-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0129-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0129-01A-01R-0219-01.data.txt GBM-06-0130-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0130.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0130.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0130-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0130-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0130-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0130-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0130-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0130-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0130-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0130-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0130-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0130-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0130-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0130-01A-01D-0216-06.seg.txt TCGA-06-0130-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0130-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0130-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0130-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0130-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0130-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0130-01A-01R-0219-01.data.txt GBM-06-0131-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0131.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0131.clin.txt TP TCGA-06-0131 GBM-06-0132-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0132.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0132.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0132.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0132.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0132-01A-02D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0132-01A-02D-0238-04.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0132-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0132-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0132-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0132-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0132-01A-02D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0132-01A-02D-0240-06.seg.txt TCGA-06-0132-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0132-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0132-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0132-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0132-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0132-01A-02R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0132-01A-02R-0233-01.data.txt GBM-06-0133-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0133.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0133.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0133.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0133.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0133-01A-02D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0133-01A-02D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0133-01A-02R-0212-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0133-01A-02D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0133-01A-02D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0133-01A-02D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0133-01A-02D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0133-01A-02D-0216-06.seg.txt TCGA-06-0133-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0133-01A-02R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0133-01A-02R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0133-01A-02R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0133-01A-02R-0219-01.data.txt GBM-06-0137-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0137.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0137.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0137.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0137.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0137-01B-02D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0137-01B-02D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0137-01B-02R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0137-01B-02R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0137-01B-02R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0137-01B-02D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0137-01A-02T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0137-01A-02D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0137-01A-02D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0137-01A-02D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0137-01A-02D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0137-01A-02D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0137-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0137-01A-01D-0216-06.seg.txt TCGA-06-0137-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0137-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0137-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0137-01B-02R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0137-01B-02R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0137-01B-02R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0137-01B-02R-0219-01.data.txt GBM-06-0138-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0138.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0138.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0138.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0138.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0138-01A-02D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0138-01A-02D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0138-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0138-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0138-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0138-01A-01T-0230-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0138-01A-02R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0138-01A-02R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0138-01A-02R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0138-01A-02R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0138-01A-02R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0138-01A-02D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0138-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0138-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0138-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0138-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0138-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0138-01A-01D-0240-06.seg.txt TCGA-06-0138-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0138-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0138-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0138-01A-02R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0138-01A-02R-0233-01.data.txt GBM-06-0139-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0139.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0139.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0139.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0139.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0139-01A-01D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0139-01B-05D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0139-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0139-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0139-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0139-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0139-01A-01T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0139-01B-05D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0139-01B-05D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0139-01B-05D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0139-01B-05D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0139-01B-05D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0139-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0139-01A-01D-0216-06.seg.txt TCGA-06-0139-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0139-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0139-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0139-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0139-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0139-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0139-01A-01R-0219-01.data.txt GBM-06-0140-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0140.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0140.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0140-01A-01D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0140-01A-01D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0140-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0140-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0140-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0140-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0140-01A-01T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0140-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0140-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0140-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0140-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0140-01A-01D-0214-01.seg.txt TCGA-06-0140-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0140-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0140-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0140-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0140-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0140-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0140-01A-01R-0219-01.data.txt GBM-06-0141-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0141.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0141.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0141.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0141.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0141-01A-01D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0141-01A-01D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0141-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0141-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0141-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0141-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0141-01A-01T-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0141-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0141-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0141-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0141-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0141-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0141-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0141-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0141-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0141-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0141-01A-01D-0214-01.seg.txt TCGA-06-0141-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0141-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0141-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0141-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0141-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0141-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0141-01A-01R-0219-01.data.txt GBM-06-0142-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0142.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0142.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0142-01A-01D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0142-01A-01D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0142-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0142-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0142-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0142-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0142-01A-01T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0142-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0142-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0142-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0142-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0142-01A-01D-0214-01.seg.txt TCGA-06-0142-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0142-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0142-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0142-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0142-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0142-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0142-01A-01R-0219-01.data.txt GBM-06-0143-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0143.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0143.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0143.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0143.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0143-01A-01D-0271-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0143-01A-01D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0143-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0143-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0143-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0143-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0143-01A-01T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0143-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0143-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0143-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0143-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0143-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0143-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0143-01A-01D-0216-06.seg.txt TCGA-06-0143-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0143-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0143-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0143-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0143-01A-01R-0219-01.data.txt GBM-06-0145-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0145.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0145.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0145.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0145.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.3.6.0/TCGA-06-0145-01A-06D-0217-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.3.4.0/TCGA-06-0145-01A-06D-0215-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0145-01A-06R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0145-01A-06R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0145-01A-06R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0145-01A-06D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0145-01A-05T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0145-01A-05D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0145-01A-05D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0145-01A-05D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0145-01A-05D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0145-01A-05D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0145-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0145-01A-01D-0216-06.seg.txt TCGA-06-0145-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0145-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0145-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0145-01A-06R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0145-01A-06R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0145-01A-06R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0145-01A-06R-0219-01.data.txt GBM-06-0146-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0146.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0146.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0146.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0146.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0146-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0146-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0146-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0146-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0146-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0146-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0146-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0146-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0146-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0146-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0146-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0146-01A-01D-0277-06.seg.txt TCGA-06-0146-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0146-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0146-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0146-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0146-01A-01R-0280-01.data.txt GBM-06-0147-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0147.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0147.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0147.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0147.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0147-01A-02D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0147-01A-02D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.3.2.0/TCGA-06-0147-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0147-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.3.2.0/TCGA-06-0147-01A-01R-0212-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0147-01A-01D-0218-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0147-01A-01T-0213-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0147-01A-02D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0147-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0147-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0147-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0147-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0147-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0147-01A-01D-0216-06.seg.txt TCGA-06-0147-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0147-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0147-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0147-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0147-01A-01R-0219-01.data.txt GBM-06-0148-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0148.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0148.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0148.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.3.46.0/TCGA-06-0148.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0148-01A-05D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0148-01A-05D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0148-01A-05R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0148-01A-05R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0148-01A-05R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.7.5.0/TCGA-06-0148-01A-01D-0218-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.3.2002.0/TCGA-06-0148-01A-01D-0214-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0148-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0148-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0148-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0148-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0148-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0148-01A-01D-0216-06.seg.txt TCGA-06-0148-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0148-01A-05R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0148-01A-05R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0148-01A-05R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0148-01A-05R-0233-01.data.txt GBM-06-0149-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0149.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0149.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0149.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0149.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0149-01A-05D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0149-01A-05D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0149-01A-05R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0149-01A-05R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0149-01A-05R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0149-01A-05T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0149-01A-05D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0149-01A-05D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0149-01A-05D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0149-01A-05D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0149-01A-05D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0149-01A-05D-0277-06.seg.txt TCGA-06-0149-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0149-01A-05R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0149-01A-05R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0149-01A-05R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0149-01A-05R-0280-01.data.txt GBM-06-0150-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0150.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0150.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0150-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0150-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0150-01A-01T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0150-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0150-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0150-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0150-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0150-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0150-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0150-01A-01D-0240-06.seg.txt TCGA-06-0150-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0150-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0150-01A-01R-0229-07.data.txt GBM-06-0151-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0151.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0151.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0151-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0151-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0151-01A-01T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0151-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0151-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0151-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0151-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0151-01A-01D-0236-01.seg.txt TCGA-06-0151-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0151-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0151-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0151-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0151-01A-01R-0229-07.data.txt GBM-06-0152-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0152.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0152.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-06-0152.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-06-0152.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-06-0152-01A-02D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-06-0152-01A-02D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-06-0152-01A-02R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-06-0152-01A-02R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-06-0152-01A-02R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0152-01A-02T-0309-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-06-0152-01A-02D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0152-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0152-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0152-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0152-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0152-01A-02D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0152-01A-02D-0312-06.seg.txt TCGA-06-0152-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0152-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0152-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0152-01A-02R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0152-01A-02R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-06-0152-01A-02R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-06-0152-01A-02R-0306-01.data.txt GBM-06-0154-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0154.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0154.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0154.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0154.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0154-01A-03D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0154-01A-03D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0154-01A-03R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0154-01A-03R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0154-01A-03R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0154-01A-02T-0230-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-0154-01A-41-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0154-01A-03D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0154-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0154-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0154-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0154-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0154-01A-02D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0154-01A-02D-0240-06.seg.txt TCGA-06-0154-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0154-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0154-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0154-01A-03R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0154-01A-03R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0154-01A-03R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0154-01A-03R-0233-01.data.txt GBM-06-0155-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-06-0155.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-06-0155.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-06-0155.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-06-0155.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-06-0155-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-06-0155-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-06-0155-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-06-0155-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-06-0155-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-06-0155-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0155-01B-01T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-0155-01B-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-06-0155-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-0155-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-0155-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-0155-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-0155-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-06-0155-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-06-0155-01B-01D-0519-06.seg.txt TCGA-06-0155-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0155-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0155-01.maf.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0158-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0158-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0158-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0158-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0158-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0158-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0158-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0158-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0158-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0158-01A-01D-0240-06.seg.txt TCGA-06-0158-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0158-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0158-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0158-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0158-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0158-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0158-01A-01R-0233-01.data.txt GBM-06-0159-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0159.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0159.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0159-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0159-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0159-01A-01T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0159-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0159-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0159-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0159-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0159-01A-01D-0236-01.seg.txt TCGA-06-0159-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0159-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0159-01A-01R-0229-07.data.txt GBM-06-0160-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0160.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0160.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0160-01A-01D-0271-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0160-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0160-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0160-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0160-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0160-01A-01T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0160-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0160-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0160-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0160-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0160-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0160-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0160-01A-01D-0240-06.seg.txt TCGA-06-0160-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0160-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0160-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0160-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0160-01A-01R-0233-01.data.txt GBM-06-0162-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0162.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0162.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0162.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0162.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0162-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0162-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0162-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0162-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0162-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0162-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0162-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0162-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0162-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0162-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0162-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0162-01A-01D-0277-06.seg.txt TCGA-06-0162-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0162-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0162-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0162-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0162-01A-01R-0280-01.data.txt GBM-06-0164-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0164.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0164.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0164.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0164.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0164-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0164-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0164-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0164-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0164-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0164-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0164-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0164-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0164-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0164-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0164-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0164-01A-01D-0277-06.seg.txt TCGA-06-0164-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0164-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0164-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0164-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0164-01A-01R-0280-01.data.txt GBM-06-0165-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0165.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0165-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0165-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0165-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0165-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0165-01A-01D-0240-06.seg.txt TCGA-06-0165-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0165-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0165-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0165-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0165-01A-01R-0229-07.data.txt GBM-06-0166-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0166.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0166.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0166.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0166.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0166-01A-01T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0166-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0166-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0166-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0166-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0166-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0166-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0166-01A-01D-0240-06.seg.txt TCGA-06-0166-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0166-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0166-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0166-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0166-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0166-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0166-01A-01R-0233-01.data.txt GBM-06-0167-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0167.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0167.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0167-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0167-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0167-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0167-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0167-01A-01R-0232-03.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0167-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0167-01A-01D-0240-06.seg.txt TCGA-06-0167-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0167-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0167-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0167-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0167-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0167-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0167-01A-01R-0233-01.data.txt GBM-06-0168-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0168.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0168.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0168-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0168-01A-02R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0168-01A-02R-0233-01.data.txt GBM-06-0169-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0169.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.3.45.0/TCGA-06-0169.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0169-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0169-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0169-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.3.2002.0/TCGA-06-0169-01A-01D-0214-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0169-01A-01D-0216-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.3.5.0/TCGA-06-0169-01A-01D-0216-06.seg.txt TCGA-06-0169-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0169-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0169-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0169-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0169-01A-01R-0213-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.3.1007.0/TCGA-06-0169-01A-01R-0219-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.3.1007.0/TCGA-06-0169-01A-01R-0219-01.data.txt GBM-06-0171-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0171.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0171.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0171-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0171-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0171-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0171-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0171-01A-02D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0171-01A-02D-0240-06.seg.txt TCGA-06-0171-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0171-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0171-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0171-01A-02R-0229-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0173-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0173-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0173-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0173-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0173-01A-01D-0240-06.seg.txt TCGA-06-0173-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0173-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0173-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0173-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0173-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0173-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0173-01A-01R-0233-01.data.txt GBM-06-0174-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0174.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0174.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0174-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0174-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0174-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0174-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0174-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0174-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0174-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0174-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0174-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0174-01A-01D-0240-06.seg.txt TCGA-06-0174-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0174-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0174-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0174-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0174-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0174-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0174-01A-01R-0233-01.data.txt GBM-06-0175-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0175.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0175.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0175.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0175.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0175-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0175-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0175-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0175-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0175-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0175-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0175-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0175-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0175-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0175-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0175-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0175-01A-01D-0277-06.seg.txt TCGA-06-0175-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0175-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0175-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0175-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0175-01A-01R-0280-01.data.txt GBM-06-0176-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0176.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0176-01A-03R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0176-01A-03R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0176-01A-03R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0176-01A-02T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0176-01A-03D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0176-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0176-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0176-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0176-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0176-01A-02D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0176-01A-02D-0240-06.seg.txt TCGA-06-0176-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0176-01A-03R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0176-01A-03R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0176-01A-03R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0176-01A-03R-0233-01.data.txt GBM-06-0177-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0177.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0177.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0177.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0177.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0177-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0177-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0177-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0177-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0177-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0177-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0177-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0177-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0177-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0177-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0177-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0177-01A-01D-0277-06.seg.txt TCGA-06-0177-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0177-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0177-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0177-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0177-01A-01R-0280-01.data.txt GBM-06-0178-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0178.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0178.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0178.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0178.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0178-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0178-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0178-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0178-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0178-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0178-01A-01T-0230-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0178-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0178-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0178-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0178-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0178-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0178-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0178-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0178-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0178-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0178-01A-01D-0236-01.seg.txt TCGA-06-0178-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0178-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0178-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0178-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0178-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0178-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0178-01A-01R-0233-01.data.txt GBM-06-0179-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0179.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0179.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0179.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0179.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0179-01A-02D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0179-01A-02D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0179-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0179-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0179-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0179-01A-03T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0179-01A-02D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0179-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0179-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0179-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0179-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0179-01A-02D-0277-06.seg.txt TCGA-06-0179-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0179-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0179-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0179-01A-02R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0179-01A-02R-0280-01.data.txt GBM-06-0182-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0182.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0182.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0182.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0182.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0182-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0182-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0182-01A-01R-0281-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0182-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0182-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0182-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0182-01A-01D-0277-06.seg.txt TCGA-06-0182-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0182-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0182-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0182-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0182-01A-01R-0280-01.data.txt GBM-06-0184-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0184.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0184.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0184.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0184.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0184-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0184-01A-01D-0238-04.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0184-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0184-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0184-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0184-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0184-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0184-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0184-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0184-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0184-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0184-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0184-01A-01D-0240-06.seg.txt TCGA-06-0184-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0184-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0184-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0184-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0184-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0184-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0184-01A-01R-0233-01.data.txt GBM-06-0185-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0185.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0185-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0185-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0185-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0185-01A-01T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0185-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0185-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0185-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0185-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0185-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0185-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0185-01A-01D-0240-06.seg.txt TCGA-06-0185-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0185-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0185-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0185-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0185-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0185-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0185-01A-01R-0233-01.data.txt GBM-06-0187-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0187.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0187.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0187-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0187-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0187-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0187-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0187-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0187-01A-01D-0240-06.seg.txt TCGA-06-0187-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0187-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0187-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0187-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0187-01A-01R-0233-01.data.txt GBM-06-0188-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0188.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0188.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0188.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0188-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0188-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0188-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0188-01A-01D-0240-06.seg.txt TCGA-06-0188-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0188-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0188-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0188-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0188-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0188-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0188-01A-01R-0233-01.data.txt GBM-06-0189-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0189.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0189.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0189.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0189-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0189-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0189-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0189-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0189-01A-01D-0240-06.seg.txt TCGA-06-0189-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0189-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0189-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0189-01A-05R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0189-01A-05R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0189-01A-05R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0189-01A-05R-0233-01.data.txt GBM-06-0190-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0190.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0190.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0190.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0190.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0190-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0190-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0190-01A-01R-0232-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0190-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0190-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0190-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0190-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0190-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0190-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0190-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0190-01A-01D-0236-01.seg.txt TCGA-06-0190-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0190-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0190-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0190-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0190-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0190-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0190-01A-01R-0233-01.data.txt GBM-06-0192-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0192.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0192.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0192.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0192.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-06-0192-01B-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-06-0192-01B-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-06-0192-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-06-0192-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-06-0192-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0192-01B-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-06-0192-01B-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0192-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0192-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0192-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0192-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-06-0192-01B-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-06-0192-01B-01D-0335-06.seg.txt TCGA-06-0192-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0192-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0192-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0192-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0192-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-06-0192-01B-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-06-0192-01B-01R-0338-01.data.txt GBM-06-0194-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0194.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0194.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0194.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0194.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0194-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0194-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0194-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0194-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0194-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0194-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0194-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0194-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0194-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0194-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0194-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0194-01A-01D-0277-06.seg.txt TCGA-06-0194-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0194-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0194-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0194-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0194-01A-01R-0280-01.data.txt GBM-06-0195-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0195.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0195.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0195.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0195.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0195-01B-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0195-01B-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0195-01B-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0195-01B-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0195-01B-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0195-01B-01T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0195-01B-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0195-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0195-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0195-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0195-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0195-01B-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0195-01B-01D-0240-06.seg.txt TCGA-06-0195-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0195-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0195-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0195-01B-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0195-01B-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0195-01B-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0195-01B-01R-0233-01.data.txt GBM-06-0197-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0197.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0197.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0197-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0197-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0197-01A-02T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0197-01A-02D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0197-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0197-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0197-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0197-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0197-01A-02D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0197-01A-02D-0240-06.seg.txt TCGA-06-0197-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0197-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0197-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0197-01A-02R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0197-01A-02R-0233-01.data.txt GBM-06-0201-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0201.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0201.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0201.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0201.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0201-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0201-01A-01R-0245-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0201-01A-01R-0245-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0201-01A-01R-0245-03.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0201-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0201-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0201-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0201-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0201-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0201-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0201-01A-01D-0240-06.seg.txt TCGA-06-0201-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0201-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0201-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0201-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0201-01A-01R-0233-01.data.txt GBM-06-0206-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0206.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0206.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0206.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0206.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0206-01A-01D-0238-04.seg.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0206-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0206-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0206-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0206-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0206-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0206-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0206-01A-01D-0240-06.seg.txt TCGA-06-0206-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0206-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0206-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0206-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0206-01A-01R-0233-01.data.txt GBM-06-0208-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0208.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0208-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0208-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0208-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0208-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0208-01B-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0208-01B-01D-0240-06.seg.txt TCGA-06-0208-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0208-01B-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0208-01B-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0208-01B-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0208-01B-01R-0233-01.data.txt GBM-06-0209-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0209.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0209.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0209.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0209-01A-01D-0240-06.seg.txt TCGA-06-0209-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0209-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0209-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0209-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0209-01A-01R-0229-07.data.txt GBM-06-0210-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0210.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0210.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0210.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0210.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0210-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0210-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0210-01B-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0210-01B-01D-0240-06.seg.txt TCGA-06-0210-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0210-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0210-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0210-01B-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0210-01B-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0210-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0210-01A-01R-0233-01.data.txt GBM-06-0211-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0211.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0211.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0211.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0211-01B-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0211-01B-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0211-01B-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0211-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0211-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0211-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0211-01B-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0211-01B-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0211-01B-01D-0240-06.seg.txt TCGA-06-0211-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0211-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0211-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0211-01B-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0211-01B-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0211-01B-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0211-01B-01R-0233-01.data.txt GBM-06-0213-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0213.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0213.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0213.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0213.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0213-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0213-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0213-01A-01T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0213-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0213-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0213-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0213-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0213-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0213-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0213-01A-01D-0240-06.seg.txt TCGA-06-0213-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0213-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0213-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0213-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0213-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0213-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0213-01A-01R-0233-01.data.txt GBM-06-0214-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0214.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0214.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0214.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0214.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0214-01A-02D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0214-01A-02D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0214-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0214-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0214-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0214-01A-02T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0214-01A-02D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0214-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0214-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0214-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0214-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0214-01A-02D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0214-01A-02D-0240-06.seg.txt TCGA-06-0214-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0214-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0214-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0214-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0214-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0214-01A-02R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0214-01A-02R-0233-01.data.txt GBM-06-0216-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0216.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0216.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0216.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0216.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-06-0216-01B-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-06-0216-01B-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-06-0216-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-06-0216-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-06-0216-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0216-01B-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-06-0216-01B-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0216-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0216-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0216-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0216-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-06-0216-01B-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-06-0216-01B-01D-0335-06.seg.txt TCGA-06-0216-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0216-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0216-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0216-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0216-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0216-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0216-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-06-0216-01B-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-06-0216-01B-01R-0338-01.data.txt GBM-06-0219-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0219.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0219.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0219.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0219.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0219-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0219-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0219-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0219-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0219-01A-01T-0230-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0219-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0219-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0219-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0219-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0219-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0219-01A-01D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0219-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0219-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0219-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0219-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0219-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0219-01A-01D-0240-06.seg.txt TCGA-06-0219-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0219-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0219-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0219-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0219-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0219-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0219-01A-01R-0233-01.data.txt GBM-06-0221-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0221.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0221.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0221.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0221.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0221-01A-01D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0221-01A-01D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0221-01A-01R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0221-01A-01R-0232-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0221-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0221-01A-01D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0221-01A-01D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0221-01A-01D-0240-06.seg.txt TCGA-06-0221-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0221-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0221-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0221-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0221-01A-01R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0221-01A-01R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0221-01A-01R-0233-01.data.txt GBM-06-0237-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0237.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0237.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0237.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0237.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0237-01A-02D-0271-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0237-01A-02D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0237-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0237-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0237-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0237-01A-02T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0237-01A-02D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0237-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0237-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0237-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0237-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0237-01A-02D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0237-01A-02D-0240-06.seg.txt TCGA-06-0237-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0237-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0237-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0237-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0237-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0237-01A-02R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0237-01A-02R-0233-01.data.txt GBM-06-0238-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0238.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0238.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-06-0238.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-06-0238.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-06-0238-01A-02D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-06-0238-01A-02D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-06-0238-01A-02R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-06-0238-01A-02R-0307-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0238-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0238-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0238-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0238-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0238-01A-02D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0238-01A-02D-0312-06.seg.txt TCGA-06-0238-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0238-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0238-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0238-01A-02R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0238-01A-02R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-06-0238-01A-02R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-06-0238-01A-02R-0306-01.data.txt GBM-06-0240-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0240.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0240.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0240-01A-03D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0240-01A-03D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0240-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0240-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0240-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0240-01A-02T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0240-01A-03D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0240-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0240-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0240-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0240-01A-03D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0240-01A-03D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.4.4.0/TCGA-06-0240-01A-03D-0240-06.seg.txt TCGA-06-0240-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0240-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0240-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0240-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0240-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0240-01A-02R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0240-01A-02R-0233-01.data.txt GBM-06-0241-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0241.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.4.47.0/TCGA-06-0241.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0241.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.4.48.0/TCGA-06-0241.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.4.6.0/TCGA-06-0241-01A-02D-0234-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.4.2.0/TCGA-06-0241-01A-02D-0238-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.4.2.0/TCGA-06-0241-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0241-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.4.2.0/TCGA-06-0241-01A-02R-0232-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0241-01A-02T-0230-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.4.2002.0/TCGA-06-0241-01A-02D-0236-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0241-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0241-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0241-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.4.2002.0/TCGA-06-0241-01A-02D-0236-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0241-01A-02D-0240-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0241-01A-02D-0240-06.seg.txt TCGA-06-0241-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0241-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0241-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_2.1.3.0/TCGA-06-0241-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_1__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_1.Level_3.1.3.0/TCGA-06-0241-01A-02R-0229-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.4.1007.0/TCGA-06-0241-01A-02R-0233-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.4.1007.0/TCGA-06-0241-01A-02R-0233-01.data.txt GBM-06-0394-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0394.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0394.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0394.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0394-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0394-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0394-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0394-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0394-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0394-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0394-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0394-01A-01D-0277-06.seg.txt TCGA-06-0394-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0394-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0394-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0394-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0394-01A-01R-0280-01.data.txt GBM-06-0397-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0397.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0397.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0397.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0397.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0397-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0397-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0397-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0397-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0397-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0397-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0397-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0397-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0397-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0397-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0397-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0397-01A-01D-0277-06.seg.txt TCGA-06-0397-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0397-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0397-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0397-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0397-01A-01R-0280-01.data.txt GBM-06-0402-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0402.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0402-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0402-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0402-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0402-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0402-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0402-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0402-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0402-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0402-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0402-01A-01D-0277-06.seg.txt TCGA-06-0402-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0402-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0402-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0402-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0402-01A-01R-0280-01.data.txt GBM-06-0409-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0409.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0409.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0409.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0409.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0409-01A-02D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0409-01A-02D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0409-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0409-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0409-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0409-01A-02T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0409-01A-02D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0409-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0409-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0409-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0409-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0409-01A-02D-0277-06.seg.txt TCGA-06-0409-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0409-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0409-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0409-01A-02R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0409-01A-02R-0280-01.data.txt GBM-06-0410-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0410.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0410.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0410.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0410.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0410-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0410-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0410-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0410-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0410-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0410-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0410-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0410-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0410-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0410-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0410-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0410-01A-01D-0277-06.seg.txt TCGA-06-0410-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0410-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0410-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0410-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0410-01A-01R-0280-01.data.txt GBM-06-0412-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0412.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0412.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0412.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0412.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0412-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0412-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0412-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0412-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0412-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0412-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0412-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0412-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0412-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0412-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0412-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0412-01A-01D-0277-06.seg.txt TCGA-06-0412-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0412-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0412-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0412-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0412-01A-01R-0280-01.data.txt GBM-06-0413-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0413.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0413.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0413.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-06-0413.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-06-0413-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-06-0413-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-06-0413-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0413-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-06-0413-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0413-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-06-0413-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0413-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0413-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0413-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0413-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0413-01A-01D-0277-06.seg.txt TCGA-06-0413-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0413-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0413-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0413-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0413-01A-01R-0280-01.data.txt GBM-06-0414-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0414.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-06-0414.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0414-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0414-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-06-0414-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0414-01A-01D-0277-06.seg.txt TCGA-06-0414-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0414-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0414-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-06-0414-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-06-0414-01A-01R-0280-01.data.txt GBM-06-0644-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0644.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0644-01A-02R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-06-0644-01A-02D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0644-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0644-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0644-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-06-0644-01A-02D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0644-01A-02D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-06-0644-01A-02D-0312-06.seg.txt TCGA-06-0644-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0644-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0644-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0644-01A-02R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0644-01A-02R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-06-0644-01A-02R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-06-0644-01A-02R-0306-01.data.txt GBM-06-0645-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0645.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-06-0645.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-06-0645.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0649-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0649-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0649-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0649-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-06-0649-01B-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-06-0649-01B-01D-0335-06.seg.txt TCGA-06-0649-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0649-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0649-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0649-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0649-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-06-0649-01B-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-06-0649-01B-01R-0338-01.data.txt GBM-06-0650-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-0650.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-0650.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-0650.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-0650.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-06-0650-01A-02D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-0650-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-06-0650-01A-02D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-0650-01A-02D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-0650-01A-02D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-0650-01A-02D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-0650-01A-02D-1694-01.seg.txt TCGA-06-0650-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0650-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0650-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-0650-01A-02R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-0650-01A-02R-1698-01.data.txt GBM-06-0673-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0673.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0673.clin.txt TP TCGA-06-0673 GBM-06-0675-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0675.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0675.clin.txt TP TCGA-06-0675 GBM-06-0676-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0676.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0676.clin.txt TP TCGA-06-0676 GBM-06-0678-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0678.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0678.clin.txt TP TCGA-06-0678 GBM-06-0680-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0680.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0680.clin.txt TP TCGA-06-0680 GBM-06-0681-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0681.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0681.clin.txt TP TCGA-06-0681 GBM-06-0686-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0686.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0686.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0686.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0686.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-06-0686-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-06-0686-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-06-0686-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-06-0686-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-06-0686-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0686-01A-01T-0341-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0686-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0686-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0686-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0686-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-0686-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-06-0686-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0686-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0686-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0686-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-06-0686-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-06-0686-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-06-0686-01A-01D-0335-06.seg.txt TCGA-06-0686-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0686-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0686-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0686-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0686-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-06-0686-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-06-0686-01A-01R-0338-01.data.txt GBM-06-0743-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0743.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-06-0743.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-06-0743.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0876-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0876-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-0876-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0876-01A-01R-0388-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-0881-01A-02R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-06-0881-01A-02R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-06-0881-01A-02R-0389-01.data.txt GBM-06-0882-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-06-0882.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-06-0882.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-06-0882-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-06-0882-01A-01D-0384-01.seg.txt TCGA-06-0882-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0882-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0882-01.maf.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-0939-01A-01T-1232-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-0939-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-06-0939-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-06-0939-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-06-0939-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-06-0939-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-06-0939-01A-01D-1224-01.seg.txt TCGA-06-0939-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-0939-01.wig.txt 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/xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-06-0939-01A-01R-1230-01.data.txt GBM-06-1084-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-06-1084.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-06-1084.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-06-1084.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-06-1084.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-06-1084-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-06-1084-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-06-1084-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-06-1084-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-06-1084-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-06-1084-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-1084-01A-01T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-1084-01A-03-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-06-1084-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1084-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1084-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1084-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1084-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-06-1084-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-06-1084-01A-01D-0519-06.seg.txt TCGA-06-1084-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-1084-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-1084-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-06-1084-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-06-1084-01A-01R-0522-01.data.txt GBM-06-1086-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-06-1086.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-06-1086.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-06-1086.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-06-1086.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-06-1086-01A-02D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-06-1086-01A-02D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-06-1086-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-06-1086-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-06-1086-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-06-1086-01A-02D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-1086-01A-02T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-1086-01A-03-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-06-1086-01A-02D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1086-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1086-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1086-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1086-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-06-1086-01A-02D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-06-1086-01A-02D-0519-06.seg.txt TCGA-06-1086-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-1086-01A-02R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-1086-01A-02R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-06-1086-01A-02R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-06-1086-01A-02R-0522-01.data.txt GBM-06-1087-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-06-1087.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-06-1087.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-06-1087.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-06-1087.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-06-1087-01A-02D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-06-1087-01A-02D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-06-1087-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-06-1087-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-06-1087-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-06-1087-01A-02D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-1087-01A-02T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-1087-01A-03-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-06-1087-01A-02D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1087-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1087-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1087-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-06-1087-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-06-1087-01A-02D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-06-1087-01A-02D-0519-06.seg.txt TCGA-06-1087-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-1087-01A-02R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-1087-01A-02R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-06-1087-01A-02R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-06-1087-01A-02R-0522-01.data.txt GBM-06-1800-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-06-1800.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-06-1800.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-06-1800.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-06-1800.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-06-1800-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-06-1800-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-06-1800-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-06-1800-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-06-1800-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-06-1800-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-1800-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-1800-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-06-1800-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1800-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1800-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1800-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1800-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-06-1800-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-06-1800-01A-01D-0593-06.seg.txt TCGA-06-1800-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-1800-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-1800-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-06-1800-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-06-1800-01A-01R-0596-01.data.txt GBM-06-1801-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-06-1801.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-06-1801.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-06-1801.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-06-1801.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-06-1801-01A-02D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-06-1801-01A-02D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-06-1801-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-06-1801-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-06-1801-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-06-1801-01A-02D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-1801-01A-02T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-06-1801-01A-02D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1801-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1801-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1801-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1801-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-06-1801-01A-02D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-06-1801-01A-02D-0593-06.seg.txt TCGA-06-1801-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-1801-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-1801-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-06-1801-01A-02R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-06-1801-01A-02R-0596-01.data.txt GBM-06-1802-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-06-1802.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-06-1802.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-06-1802.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-06-1802.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-06-1802-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-06-1802-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-06-1802-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-06-1802-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-06-1802-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-06-1802-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-1802-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-1802-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-06-1802-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1802-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1802-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1802-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1802-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-06-1802-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-06-1802-01A-01D-0593-06.seg.txt TCGA-06-1802-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-1802-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-1802-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-06-1802-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-06-1802-01A-01R-0596-01.data.txt GBM-06-1804-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-1804.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-1804.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-1804.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-1804.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-06-1804-01A-01D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-1804-01A-21-1899-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-1804-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-1804-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-1804-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-1804-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-1804-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-06-1804-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-1804-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-1804-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-1804-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-1804-01A-01D-1694-01.seg.txt TCGA-06-1804-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-1804-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-1804-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-1804-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-1804-01A-01R-1698-01.data.txt GBM-06-1805-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-06-1805.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-06-1805.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-06-1805.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-06-1805.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-06-1805-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-06-1805-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-06-1805-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-06-1805-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-06-1805-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-06-1805-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-1805-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-1805-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-06-1805-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1805-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1805-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1805-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-06-1805-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-06-1805-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-06-1805-01A-01D-0593-06.seg.txt TCGA-06-1805-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-1805-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-1805-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-06-1805-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-06-1805-01A-01R-0596-01.data.txt GBM-06-1806-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-1806.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-1806.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-1806-01A-02D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-1806-01A-11-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-1806-01A-02D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-1806-01A-02D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-1806-01A-02D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-1806-01A-02D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-1806-01A-02D-1842-01.seg.txt TCGA-06-1806-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-1806-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-1806-01.maf.txt GBM-06-2557-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-06-2557.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-06-2557.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-06-2557.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-06-2557.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-06-2557-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-06-2557-01A-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-06-2557-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-06-2557-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-06-2557-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-06-2557-01A-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-06-2557-01A-01T-0792-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-2557-01A-22-1899-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-2557-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-2557-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-2557-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-2557-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-06-2557-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-06-2557-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-06-2557-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-06-2557-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-06-2557-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-06-2557-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-06-2557-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-06-2557-01A-01D-0786-06.seg.txt TCGA-06-2557-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-2557-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-2557-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-2557-01A-01R-0791-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-2561-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-2561-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-2561-01A-02R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-2561-01A-02R-0791-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-2566-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-2566-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-06-2566-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-06-2566-01A-01R-0789-01.data.txt GBM-06-2567-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-06-2567.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-06-2567-01A-01D-0786-06.seg.txt TCGA-06-2567-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-2567-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-2567-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-06-2567-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-06-2567-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-06-2567-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-06-2567-01A-01R-0789-01.data.txt GBM-06-2569-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-06-2569.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-06-2569.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-06-2569-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-06-2569-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-06-2569-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-06-2569-01A-01D-0784-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-06-5408-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5408-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5408-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5408-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5408-01A-01D-1694-01.seg.txt TCGA-06-5408-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5408-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5408-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-5408-01A-01R-1698-01.data.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5410-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5410-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-5410-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-5410-01A-01R-1698-01.data.txt GBM-06-5411-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-5411.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-06-5412-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5412-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5412-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5412-01A-01D-1694-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5413-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5413-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-5413-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-5413-01A-01R-1698-01.data.txt GBM-06-5414-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-06-5414.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-06-5415-01A-01D-1479-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-06-5415-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-06-5415-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-06-5415-01A-01D-1479-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5417-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5417-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-06-5417-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-06-5417-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-06-5417-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-06-5417-01A-01R-1482-01.data.txt GBM-06-5418-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-06-5418.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-06-5418.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-06-5418.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-06-5418-01A-01D-1479-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-06-5418-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-06-5418-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-06-5418-01A-01D-1479-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-06-5856-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5856-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5856-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5856-01A-01D-1694-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5858-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5858-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-5858-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-5858-01A-01R-1698-01.data.txt GBM-06-5859-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-5859.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5859-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-5859-01A-01D-1694-01.seg.txt TCGA-06-5859-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5859-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-5859-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-5859-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-5859-01A-01R-1698-01.data.txt GBM-06-6388-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6388.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6388.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6388.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6388.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6388-01A-12D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6388-01A-23-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6388-01A-12D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6388-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6388-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6388-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6388-01A-12D-1842-01.seg.txt TCGA-06-6388-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6388-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6388-01.maf.txt GBM-06-6389-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-6389.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-6389.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-6389.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-6389.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-06-6389-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6389-01A-23-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-06-6389-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6389-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6389-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6389-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6389-01A-11D-1694-01.seg.txt TCGA-06-6389-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6389-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6389-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-6389-01A-13R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-6389-01A-13R-1698-01.data.txt GBM-06-6390-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-6390.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-6390.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-6390.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-6390.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-06-6390-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6390-01A-23-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-06-6390-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6390-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6390-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6390-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6390-01A-11D-1694-01.seg.txt TCGA-06-6390-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6390-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6390-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-6390-01A-13R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-6390-01A-13R-1698-01.data.txt GBM-06-6391-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-6391.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-06-6391.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-6391.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-06-6391.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-06-6391-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6391-01A-23-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-06-6391-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6391-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6391-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6391-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-06-6391-01A-11D-1694-01.seg.txt TCGA-06-6391-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6391-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6391-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-06-6391-01A-13R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-06-6391-01A-13R-1698-01.data.txt GBM-06-6693-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6693.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6693.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6693.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6693.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6693-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6693-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6693-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6693-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6693-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6693-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6693-01A-11D-1842-01.seg.txt TCGA-06-6693-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6693-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6693-01.maf.txt GBM-06-6694-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6694.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6694.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6694.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6694.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6694-01A-12D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6694-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6694-01A-12D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6694-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6694-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6694-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6694-01A-12D-1842-01.seg.txt TCGA-06-6694-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6694-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6694-01.maf.txt GBM-06-6695-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6695.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6695.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6695.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6695.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6695-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6695-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6695-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6695-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6695-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6695-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6695-01A-11D-1842-01.seg.txt TCGA-06-6695-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6695-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6695-01.maf.txt GBM-06-6697-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6697.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6697.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6697.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6697.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6697-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6697-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6697-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6697-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6697-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6697-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6697-01A-11D-1842-01.seg.txt TCGA-06-6697-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6697-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6697-01.maf.txt GBM-06-6698-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6698.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6698.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6698.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6698.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6698-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6698-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6698-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6698-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6698-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6698-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6698-01A-11D-1842-01.seg.txt TCGA-06-6698-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6698-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6698-01.maf.txt GBM-06-6699-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6699.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6699.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6699.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6699.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6699-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6699-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6699-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6699-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6699-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6699-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6699-01A-11D-1842-01.seg.txt TCGA-06-6699-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6699-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6699-01.maf.txt GBM-06-6700-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6700.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6700.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6700.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6700.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6700-01A-12D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6700-01A-23-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6700-01A-12D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6700-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6700-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6700-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6700-01A-12D-1842-01.seg.txt TCGA-06-6700-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6700-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6700-01.maf.txt GBM-06-6701-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6701.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-06-6701.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6701.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-06-6701.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-06-6701-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-06-6701-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-06-6701-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6701-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6701-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6701-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-06-6701-01A-11D-1842-01.seg.txt TCGA-06-6701-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6701-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-06-6701-01.maf.txt GBM-08-0244-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0244.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0244.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0244.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0244.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-08-0244-01A-01G-0326-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0244-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0244-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0244-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0244-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0244-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0244-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0244-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0244-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0244-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0244-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0244-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0244-01A-01G-0295-06.seg.txt TCGA-08-0244-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0244-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0244-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0244-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0244-01A-01R-0298-01.data.txt GBM-08-0245-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0245.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0245.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0245.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0245.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0245-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0245-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0245-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0245-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0245-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0245-01A-11-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0245-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0245-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0245-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0245-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0245-01A-01G-0293-01.seg.txt TCGA-08-0245-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0245-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0245-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0245-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0245-01A-01R-0298-01.data.txt GBM-08-0246-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0246.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0246.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0246.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0246.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-08-0246-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0246-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0246-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0246-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0246-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0246-01A-01T-0301-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0246-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0246-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0246-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0246-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0246-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0246-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0246-01A-01G-0295-06.seg.txt TCGA-08-0246-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0246-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0246-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0246-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0246-01A-01R-0298-01.data.txt GBM-08-0344-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0344.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0344.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0344.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0344.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-08-0344-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0344-01A-01D-0304-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0344-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0344-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0344-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0344-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0344-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0344-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0344-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0344-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0344-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0344-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0344-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0344-01A-01G-0295-06.seg.txt TCGA-08-0344-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0344-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0344-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0344-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0344-01A-01R-0298-01.data.txt GBM-08-0345-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0345.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0345.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0345.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0345.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-08-0345-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-08-0345-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-08-0345-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0345-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0345-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0345-01A-01T-0309-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0345-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-08-0345-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0345-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0345-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0345-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0345-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0345-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0345-01A-01D-0312-06.seg.txt TCGA-08-0345-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0345-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0345-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-08-0345-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-08-0345-01A-01R-0306-01.data.txt GBM-08-0346-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0346.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0346.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0346.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0346.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0346-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0346-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0346-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0346-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0346-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0346-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0346-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0346-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0346-01A-01G-0295-06.seg.txt TCGA-08-0346-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0346-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0346-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0346-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0346-01A-01R-0298-01.data.txt GBM-08-0347-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0347.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0347.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0347.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0347.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0347-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0347-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0347-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0347-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0347-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0347-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0347-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0347-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0347-01A-01G-0295-06.seg.txt TCGA-08-0347-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0347-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0347-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0347-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0347-01A-01R-0298-01.data.txt GBM-08-0348-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0348.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0348.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0348.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0348.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-08-0348-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0348-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0348-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0348-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0348-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0348-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0348-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0348-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0348-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0348-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0348-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0348-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0348-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0348-01A-01G-0295-06.seg.txt TCGA-08-0348-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0348-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0348-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0348-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0348-01A-01R-0298-01.data.txt GBM-08-0349-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0349.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0349.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0349.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0349.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-08-0349-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-08-0349-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-08-0349-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0349-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0349-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0349-01A-01T-0309-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0349-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-08-0349-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0349-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0349-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0349-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0349-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0349-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0349-01A-01D-0312-06.seg.txt TCGA-08-0349-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0349-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0349-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-08-0349-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-08-0349-01A-01R-0306-01.data.txt GBM-08-0350-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0350.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0350.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0350.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0350.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0350-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0350-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0350-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0350-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0350-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0350-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0350-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0350-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0350-01A-01G-0295-06.seg.txt TCGA-08-0350-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0350-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0350-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0350-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0350-01A-01R-0298-01.data.txt GBM-08-0351-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0351.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0351.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0351.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0351.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0351-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0351-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0351-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0351-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0351-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0351-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0351-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0351-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0351-01A-01G-0295-06.seg.txt TCGA-08-0351-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0351-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0351-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0351-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0351-01A-01R-0298-01.data.txt GBM-08-0352-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0352.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0352.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0352.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0352.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0352-01A-01T-0309-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0352-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-08-0352-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0352-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0352-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0352-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0352-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0352-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0352-01A-01D-0312-06.seg.txt TCGA-08-0352-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0352-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0352-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-08-0352-01A-01R-0306-01.data.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0353-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0353-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0353-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0353-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0353-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0353-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0353-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0353-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0353-01A-01G-0295-06.seg.txt TCGA-08-0353-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0353-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0353-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0353-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0353-01A-01R-0298-01.data.txt GBM-08-0354-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0354.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0354.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0354.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0354.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0357-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0357-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0357-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0357-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0357-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0357-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0357-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0357-01A-01G-0295-06.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0357-01A-01R-0298-01.data.txt GBM-08-0358-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0358.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0358.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0358.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0358.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-08-0358-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-08-0358-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-08-0358-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0358-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0358-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0358-01A-01T-0309-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0358-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-08-0358-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0358-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0358-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0358-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-08-0358-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0358-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0358-01A-01D-0312-06.seg.txt TCGA-08-0358-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0358-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0358-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-08-0358-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-08-0358-01A-01R-0306-01.data.txt GBM-08-0359-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0359.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0359.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0359.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0359.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-08-0359-01A-01G-0326-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0359-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0359-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0359-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0359-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0359-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0359-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0359-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0359-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0359-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0359-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0359-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0359-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0359-01A-01G-0295-06.seg.txt TCGA-08-0359-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0359-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0359-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0359-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0359-01A-01R-0298-01.data.txt GBM-08-0360-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0360.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0360.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0360.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0360.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-08-0360-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0360-01A-01G-0294-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0360-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0360-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0360-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0360-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0360-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0360-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0360-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0360-01A-01G-0295-06.seg.txt TCGA-08-0360-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0360-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0360-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0360-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0360-01A-01R-0298-01.data.txt GBM-08-0373-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0373.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0373.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0373.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0373.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-08-0373-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-08-0373-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-08-0373-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0373-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0373-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0373-01A-01T-0309-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0373-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-08-0373-01A-01D-0310-01.birdseed.txt TCGA-08-0373 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0373-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0373-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-08-0373-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-08-0373-01A-01R-0306-01.data.txt GBM-08-0375-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0375.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0375.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0375.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0375.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-08-0375-01A-01G-0326-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0375-01A-01D-0304-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0375-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0375-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0375-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0375-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0375-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0375-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0375-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0375-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0375-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0375-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0375-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0375-01A-01G-0295-06.seg.txt TCGA-08-0375-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0375-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0375-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0375-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0375-01A-01R-0298-01.data.txt GBM-08-0380-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0380.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0380.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0380.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0380.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.8.4.0/TCGA-08-0380-01A-01G-0296-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.6.2.0/TCGA-08-0380-01A-01D-0304-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.6.2.0/TCGA-08-0380-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0380-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.6.2.0/TCGA-08-0380-01A-01R-0299-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0380-01A-01T-0301-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-08-0380-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0380-01A-01G-0293-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0380-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0380-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0380-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0380-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0380-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0380-01A-01G-0295-06.seg.txt TCGA-08-0380-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0380-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0380-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0380-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0380-01A-01R-0298-01.data.txt GBM-08-0385-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0385.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.6.45.0/TCGA-08-0385.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0385.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.6.46.0/TCGA-08-0385.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.6.2002.0/TCGA-08-0385-01A-01G-0293-01.birdseed.txt TCGA-08-0385 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0385-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0385-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0385-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0385-01A-01R-0298-01.data.txt GBM-08-0386-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0386.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-08-0386.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0386.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-08-0386.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-08-0386-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-08-0386-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-08-0386-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0386-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-08-0386-01A-01R-0307-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0392-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0392-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.6.2003.0/TCGA-08-0392-01A-01G-0293-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0392-01A-01G-0295-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0392-01A-01G-0295-06.seg.txt TCGA-08-0392-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0392-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0392-01A-01R-0300-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.6.1007.0/TCGA-08-0392-01A-01R-0298-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.6.1007.0/TCGA-08-0392-01A-01R-0298-01.data.txt GBM-08-0509-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0509.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0509.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0509.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0509.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0509-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0509-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0509-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0509-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0509-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0509-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0509-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0509-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0509-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0509-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0509-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0509-01A-01D-0277-06.seg.txt TCGA-08-0509-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0509-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0509-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0509-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0509-01A-01R-0280-01.data.txt GBM-08-0510-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0510.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0510.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0510.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0510.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0510-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0510-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0510-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0510-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0510-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0510-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0510-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0510-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0510-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0510-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0510-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0510-01A-01D-0277-06.seg.txt TCGA-08-0510-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0510-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0510-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0510-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0510-01A-01R-0280-01.data.txt GBM-08-0511-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0511.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0511-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0511-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0511-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0511-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0511-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0511-01A-01D-0277-06.seg.txt TCGA-08-0511-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0511-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0511-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0511-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0511-01A-01R-0280-01.data.txt GBM-08-0512-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0512.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0512.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0512.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0512.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0512-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0512-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0512-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0512-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0512-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0512-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0512-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0512-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0512-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0512-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0512-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0512-01A-01D-0277-06.seg.txt TCGA-08-0512-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0512-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0512-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0512-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0512-01A-01R-0280-01.data.txt GBM-08-0514-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0514.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0514.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0514.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0514.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0514-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0514-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0514-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0514-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0514-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0514-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0514-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0514-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0514-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0514-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0514-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0514-01A-01D-0277-06.seg.txt TCGA-08-0514-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0514-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0514-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0514-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0514-01A-01R-0280-01.data.txt GBM-08-0516-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0516.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0516.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0516.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0516.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0516-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0516-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0516-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0516-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0516-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0516-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0516-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0516-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0516-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0516-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0516-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0516-01A-01D-0277-06.seg.txt TCGA-08-0516-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0516-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0516-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0516-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0516-01A-01R-0280-01.data.txt GBM-08-0517-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0517.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0517.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0517.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0517.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0517-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0517-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0517-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0517-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0517-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0517-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0517-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0517-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0517-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0517-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0517-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0517-01A-01D-0277-06.seg.txt TCGA-08-0517-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0517-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0517-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0517-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0517-01A-01R-0280-01.data.txt GBM-08-0518-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0518.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0518.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0518.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0518.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0518-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0518-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0518-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0518-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0518-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0518-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0518-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0518-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0518-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0518-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0518-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0518-01A-01D-0277-06.seg.txt TCGA-08-0518-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0518-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0518-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0518-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0518-01A-01R-0280-01.data.txt GBM-08-0520-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0520.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0520.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0520.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0520.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0520-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0520-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0520-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0520-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0520-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0520-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0520-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0520-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0520-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0520-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0520-01A-01D-0275-01.seg.txt TCGA-08-0520-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0520-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0520-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0520-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0520-01A-01R-0280-01.data.txt GBM-08-0521-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0521.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0521.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0521.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0521.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0521-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0521-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0521-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0521-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0521-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0521-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0521-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0521-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0521-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0521-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0521-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0521-01A-01D-0277-06.seg.txt TCGA-08-0521-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0521-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0521-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0521-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0521-01A-01R-0280-01.data.txt GBM-08-0522-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0522.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0522.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0522.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0522.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0522-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0522-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0522-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0522-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0522-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0522-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0522-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0522-01A-01D-0277-06.seg.txt TCGA-08-0522-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0522-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0522-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0522-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0522-01A-01R-0280-01.data.txt GBM-08-0524-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0524.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0524.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0524.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0524.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0524-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0524-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0524-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0524-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0524-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0524-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0524-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0524-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0524-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0524-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0524-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0524-01A-01D-0277-06.seg.txt TCGA-08-0524-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0524-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0524-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0524-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0524-01A-01R-0280-01.data.txt GBM-08-0525-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0525.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0525.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0525.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0525.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0525-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0525-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0525-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0525-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0525-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0525-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0525-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0525-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0525-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0525-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0525-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0525-01A-01D-0277-06.seg.txt TCGA-08-0525-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0525-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0525-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0525-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0525-01A-01R-0280-01.data.txt GBM-08-0529-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0529.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0529.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0529.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0529.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0529-01A-02D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0529-01A-02D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0529-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0529-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0529-01A-02R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0529-01A-02T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0529-01A-02D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0529-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0529-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0529-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0529-01A-02D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0529-01A-02D-0277-06.seg.txt TCGA-08-0529-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0529-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0529-01A-02R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0529-01A-02R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0529-01A-02R-0280-01.data.txt GBM-08-0531-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0531.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.5.38.0/TCGA-08-0531.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0531.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.5.39.0/TCGA-08-0531.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.6.4.0/TCGA-08-0531-01A-01D-0278-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.5.3.0/TCGA-08-0531-01A-01D-0276-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.5.2.0/TCGA-08-0531-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0531-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.5.2.0/TCGA-08-0531-01A-01R-0281-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-08-0531-01A-01T-0283-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.5.2002.0/TCGA-08-0531-01A-01D-0275-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0531-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0531-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0531-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.5.2002.0/TCGA-08-0531-01A-01D-0275-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-08-0531-01A-01D-0277-06.seg.txt TCGA-08-0531-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-08-0531-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-08-0531-01A-01R-0282-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.5.1007.0/TCGA-08-0531-01A-01R-0280-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.5.1007.0/TCGA-08-0531-01A-01R-0280-01.data.txt GBM-08-0623-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-08-0623.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-08-0623.clin.txt TP TCGA-08-0623 GBM-08-0625-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-08-0625.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-08-0625.clin.txt TP TCGA-08-0625 GBM-08-0626-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-08-0626.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-08-0626.clin.txt TP TCGA-08-0626 GBM-08-0627-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-08-0627.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-08-0627.clin.txt TP TCGA-08-0627 GBM-12-0615-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0615.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0615.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0615.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0615.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-12-0615-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-12-0615-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-12-0615-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-12-0615-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-12-0615-01A-01R-0307-03.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-12-0615-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0615-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0615-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0615-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0615-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0615-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0615-01A-01D-0312-06.seg.txt TCGA-12-0615-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0615-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0615-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0615-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0615-01A-01R-0308-07.data.txt GBM-12-0616-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0616.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0616.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0616.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0616.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-12-0616-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-12-0616-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-12-0616-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-12-0616-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-12-0616-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0616-01A-01T-0309-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0616-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0616-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0616-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0616-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0616-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-12-0616-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0616-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0616-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0616-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0616-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0616-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0616-01A-01D-0312-06.seg.txt TCGA-12-0616-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0616-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0616-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0616-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0616-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-12-0616-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-12-0616-01A-01R-0306-01.data.txt GBM-12-0618-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0618.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0618.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0618.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0618.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-12-0618-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-12-0618-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-12-0618-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-12-0618-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-12-0618-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0618-01A-01T-0309-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0618-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0618-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0618-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0618-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0618-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-12-0618-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0618-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0618-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0618-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0618-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0618-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0618-01A-01D-0312-06.seg.txt TCGA-12-0618-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0618-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0618-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0618-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0618-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-12-0618-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-12-0618-01A-01R-0306-01.data.txt GBM-12-0619-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0619.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0619.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0619.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0619.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-12-0619-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-12-0619-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-12-0619-01A-01R-0307-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0619-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0619-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0619-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-12-0619-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0619-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0619-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0619-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0619-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0619-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0619-01A-01D-0312-06.seg.txt TCGA-12-0619-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0619-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0619-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0619-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0619-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-12-0619-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-12-0619-01A-01R-0306-01.data.txt GBM-12-0620-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0620.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.7.42.0/TCGA-12-0620.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0620.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.7.43.0/TCGA-12-0620.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.9.4.0/TCGA-12-0620-01A-01D-0313-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.7.2.0/TCGA-12-0620-01A-01D-0311-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.7.2.0/TCGA-12-0620-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-12-0620-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.7.2.0/TCGA-12-0620-01A-01R-0307-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0620-01A-01T-0309-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.7.2002.0/TCGA-12-0620-01A-01D-0310-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0620-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0620-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0620-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.7.2002.0/TCGA-12-0620-01A-01D-0310-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0620-01A-01D-0312-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.6.3.0/TCGA-12-0620-01A-01D-0312-06.seg.txt TCGA-12-0620-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0620-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0620-01A-01R-0308-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.7.1007.0/TCGA-12-0620-01A-01R-0306-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.7.1007.0/TCGA-12-0620-01A-01R-0306-01.data.txt GBM-12-0653-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0653.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0653.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0653.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0653.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0653-01B-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0653-01B-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0653-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0653-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0653-01A-01R-0339-03.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0653-01B-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0653-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0653-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0653-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0653-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0653-01B-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0653-01B-01D-0335-06.seg.txt TCGA-12-0653-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0653-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0653-01A-01R-0340-07.data.txt GBM-12-0654-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0654.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0654.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0654.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0654.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0654-01B-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0654-01B-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0654-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0654-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0654-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0654-01B-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0654-01B-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0654-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0654-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0654-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0654-01B-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0654-01B-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0654-01B-01D-0335-06.seg.txt TCGA-12-0654-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0654-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0654-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0654-01B-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0654-01B-01R-0338-01.data.txt GBM-12-0656-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0656.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0656.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0656.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0656.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0656-01A-03D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0656-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0656-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0656-01B-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0656-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0656-01A-03D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0656-01A-03D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0656-01A-03D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0656-01A-03D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0656-01A-03D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0656-01A-03D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0656-01A-03D-0335-06.seg.txt TCGA-12-0656-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0656-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0656-01B-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0656-01B-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0656-01B-01R-0338-01.data.txt GBM-12-0657-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0657.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0657.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0657.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0657.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0657-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0657-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0657-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0657-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0657-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0657-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0657-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0657-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0657-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0657-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0657-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0657-01A-01D-0335-06.seg.txt TCGA-12-0657-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0657-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0657-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0657-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0657-01A-01R-0338-01.data.txt GBM-12-0662-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0662.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0662.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0662.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0662.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0662-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0662-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0662-01A-01R-0339-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0662-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0662-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0662-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0662-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0662-01A-01D-0335-06.seg.txt TCGA-12-0662-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0662-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0662-01A-01R-0340-07.data.txt GBM-12-0670-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0670.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0670.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0670-01B-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0670-01B-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0670-01B-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0670-01B-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0670-01B-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0670-01B-01D-0386-06.seg.txt TCGA-12-0670-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0670-01B-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0670-01B-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0670-01B-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0670-01B-01R-0389-01.data.txt GBM-12-0688-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0688.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0688.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0688.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0688-01A-02D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0688-01A-02D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0688-01A-02D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0688-01A-02D-0335-06.seg.txt TCGA-12-0688-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0688-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0688-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0688-01A-02R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0688-01A-02R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0688-01A-02R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0688-01A-02R-0338-01.data.txt GBM-12-0691-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0691.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0691.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0691.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0691-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0691-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0691-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0691-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0691-01A-01D-0335-06.seg.txt TCGA-12-0691-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0691-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0691-01A-01R-0340-07.data.txt GBM-12-0692-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0692.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0692.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0692.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0692.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0692-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0692-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0692-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0692-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0692-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0692-01A-01T-0341-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-12-0692-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0692-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0692-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0692-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0692-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0692-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0692-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0692-01A-01D-0335-06.seg.txt TCGA-12-0692-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0692-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0692-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0692-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0692-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0692-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0692-01A-01R-0338-01.data.txt GBM-12-0703-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0703.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0703.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0703.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0703.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0703-01A-02D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0703-01A-02D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0703-01A-02R-0339-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0703-01A-02D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0703-01A-02D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0703-01A-02D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0703-01A-02D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0703-01A-02D-0335-06.seg.txt TCGA-12-0703-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0703-01A-02R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0703-01A-02R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0703-01A-02R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0703-01A-02R-0338-01.data.txt GBM-12-0707-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0707.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0707.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0707.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0707.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0707-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0707-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0707-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0707-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0707-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0707-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0707-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0707-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0707-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0707-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0707-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0707-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0707-01A-01D-0335-06.seg.txt TCGA-12-0707-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0707-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0707-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0707-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0707-01A-01R-0338-01.data.txt GBM-12-0769-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0769.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0769.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0769.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0769.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0769-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0769-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0769-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0769-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0769-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0769-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0769-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0769-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0769-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0769-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0769-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0769-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0769-01A-01D-0335-06.seg.txt TCGA-12-0769-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0769-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0769-01A-01R-0340-07.data.txt GBM-12-0772-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0772.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0772.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0772.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0772.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0772-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0772-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0772-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0772-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0772-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0772-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0772-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0772-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0772-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0772-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0772-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0772-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0772-01A-01D-0335-06.seg.txt TCGA-12-0772-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0772-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0772-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0772-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0772-01A-01R-0338-01.data.txt GBM-12-0773-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0773.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0773.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0773.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0773.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0773-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0773-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0773-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0773-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0773-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0773-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0773-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0773-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0773-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0773-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0773-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0773-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0773-01A-01D-0335-06.seg.txt TCGA-12-0773-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0773-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0773-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0773-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0773-01A-01R-0338-01.data.txt GBM-12-0775-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0775.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0775.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0775.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0775.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0775-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0775-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0775-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0775-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0775-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0775-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0775-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0775-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0775-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0775-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0775-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0775-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0775-01A-01D-0335-06.seg.txt TCGA-12-0775-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0775-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0775-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0775-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0775-01A-01R-0338-01.data.txt GBM-12-0776-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0776.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0776.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0776.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0776.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0776-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0776-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0776-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0776-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0776-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0776-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0776-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0776-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0776-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0776-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0776-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0776-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0776-01A-01D-0335-06.seg.txt TCGA-12-0776-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0776-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0776-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0776-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0776-01A-01R-0338-01.data.txt GBM-12-0778-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0778.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0778.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0778.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0778.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0778-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0778-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0778-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0778-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0778-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0778-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0778-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0778-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0778-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0778-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0778-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0778-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0778-01A-01D-0335-06.seg.txt TCGA-12-0778-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0778-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0778-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0778-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0778-01A-01R-0338-01.data.txt GBM-12-0780-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0780.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-12-0780.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0780.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-12-0780.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-12-0780-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-12-0780-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-12-0780-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0780-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-12-0780-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0780-01A-01T-0341-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-12-0780-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0780-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0780-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0780-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-12-0780-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0780-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-12-0780-01A-01D-0335-06.seg.txt TCGA-12-0780-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0780-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0780-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-12-0780-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-12-0780-01A-01R-0338-01.data.txt GBM-12-0818-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0818.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0818.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0818.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0818.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0818-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0818-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0818-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0818-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0818-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0818-01A-01D-0392-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0818-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0818-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0818-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0818-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0818-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0818-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0818-01A-01D-0386-06.seg.txt TCGA-12-0818-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0818-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0818-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0818-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0818-01A-01R-0389-01.data.txt GBM-12-0819-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0819.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0819.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0819.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0819.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0819-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0819-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0819-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0819-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0819-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0819-01A-01D-0392-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0819-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0819-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0819-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0819-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0819-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0819-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0819-01A-01D-0386-06.seg.txt TCGA-12-0819-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0819-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0819-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0819-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0819-01A-01R-0389-01.data.txt GBM-12-0820-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0820.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0820.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0820.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0820.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0820-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0820-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0820-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0820-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0820-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0820-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0820-01A-01T-0391-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0820-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0820-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0820-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0820-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0820-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0820-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0820-01A-01D-0386-06.seg.txt TCGA-12-0820-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0820-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0820-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0820-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0820-01A-01R-0389-01.data.txt GBM-12-0821-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0821.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0821.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0821.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0821.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0821-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0821-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0821-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0821-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0821-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0821-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0821-01A-01T-0391-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0821-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0821-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0821-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0821-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-0821-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0821-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0821-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0821-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0821-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0821-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0821-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0821-01A-01D-0386-06.seg.txt TCGA-12-0821-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0821-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-0821-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0821-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0821-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0821-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0821-01A-01R-0389-01.data.txt GBM-12-0822-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0822.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0822.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0822.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0822.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0822-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0822-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0822-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0822-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0822-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0822-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0822-01A-01T-0391-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0822-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0822-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0822-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0822-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0822-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0822-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0822-01A-01D-0386-06.seg.txt TCGA-12-0822-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0822-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0822-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0822-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0822-01A-01R-0389-01.data.txt GBM-12-0826-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0826.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0826.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0826.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0826.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0826-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0826-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0826-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0826-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0826-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0826-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0826-01A-01T-0391-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0826-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0826-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0826-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0826-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0826-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0826-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0826-01A-01D-0386-06.seg.txt TCGA-12-0826-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0826-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0826-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0826-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0826-01A-01R-0389-01.data.txt GBM-12-0827-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0827.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0827.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0827.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0827.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0827-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0827-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0827-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0827-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0827-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0827-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0827-01A-01T-0391-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0827-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0827-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0827-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0827-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0827-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0827-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0827-01A-01D-0386-06.seg.txt TCGA-12-0827-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0827-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0827-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0827-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0827-01A-01R-0389-01.data.txt GBM-12-0828-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0828.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0828.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0828.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0828.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0828-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0828-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0828-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0828-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0828-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0828-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0828-01A-01T-0391-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0828-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0828-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0828-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0828-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0828-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0828-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-12-0828-01A-01D-0386-06.seg.txt TCGA-12-0828-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0828-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0828-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0828-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0828-01A-01R-0389-01.data.txt GBM-12-0829-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0829.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-12-0829.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0829.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-12-0829.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.11.1.0/TCGA-12-0829-01A-01D-0387-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.10.2.0/TCGA-12-0829-01A-01D-0385-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.10.2.0/TCGA-12-0829-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0829-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-12-0829-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-12-0829-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-0829-01A-01T-0391-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-12-0829-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0829-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0829-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0829-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-12-0829-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-0829-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-0829-01A-01D-0386-06.seg.txt TCGA-12-0829-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-0829-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-0829-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-12-0829-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-12-0829-01A-01R-0389-01.data.txt GBM-12-1088-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1088.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1088.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1088.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1088.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1088-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1088-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1088-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1088-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1088-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1088-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1088-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1088-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1088-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1088-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1088-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1088-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1088-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1088-01A-01D-0519-06.seg.txt TCGA-12-1088-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1088-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1088-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1088-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1088-01A-01R-0522-01.data.txt GBM-12-1089-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1089.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1089.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1089.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1089.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1089-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1089-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1089-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1089-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1089-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1089-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1089-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1089-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1089-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1089-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1089-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1089-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1089-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1089-01A-01D-0519-06.seg.txt TCGA-12-1089-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1089-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1089-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1089-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1089-01A-01R-0522-01.data.txt GBM-12-1090-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1090.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1090.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1090.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1090.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1090-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1090-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1090-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1090-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1090-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1090-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1090-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1090-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1090-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1090-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1090-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1090-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1090-01A-01D-0519-06.seg.txt TCGA-12-1090-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1090-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1090-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1090-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1090-01A-01R-0522-01.data.txt GBM-12-1091-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1091.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1091.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1091.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1091.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1091-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1091-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1091-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1091-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1091-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1091-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1091-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1091-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1091-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1091-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1091-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1091-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1091-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1091-01A-01D-0519-06.seg.txt TCGA-12-1091-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1091-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1091-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1091-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1091-01A-01R-0522-01.data.txt GBM-12-1092-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1092.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1092.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1092.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1092.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1092-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1092-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1092-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1092-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1092-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1092-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1092-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1092-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1092-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1092-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1092-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1092-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1092-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1092-01B-01D-0519-06.seg.txt TCGA-12-1092-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1092-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1092-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1092-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1092-01B-01R-0522-01.data.txt GBM-12-1093-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1093.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1093.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1093.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1093.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1093-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1093-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1093-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1093-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1093-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1093-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1093-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1093-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1093-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1093-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1093-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1093-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1093-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1093-01A-01D-0519-06.seg.txt TCGA-12-1093-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1093-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1093-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1093-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1093-01A-01R-0522-01.data.txt GBM-12-1094-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1094.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1094.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1094.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1094.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1094-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1094-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1094-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1094-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1094-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1094-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1094-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1094-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1094-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1094-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1094-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1094-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1094-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1094-01A-01D-0519-06.seg.txt TCGA-12-1094-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1094-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1094-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1094-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1094-01A-01R-0522-01.data.txt GBM-12-1095-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1095.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1095.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1095.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1095.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1095-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1095-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1095-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1095-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1095-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1095-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1095-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1095-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1095-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1095-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1095-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1095-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1095-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1095-01A-01D-0519-06.seg.txt TCGA-12-1095-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1095-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1095-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1095-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1095-01A-01R-0522-01.data.txt GBM-12-1096-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1096.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1096.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1096.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1096.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1096-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1096-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1096-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1096-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1096-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1096-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1096-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1096-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1096-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1096-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1096-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1096-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1096-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1096-01A-01D-0519-06.seg.txt TCGA-12-1096-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1096-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1096-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1096-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1096-01A-01R-0522-01.data.txt GBM-12-1097-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1097.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1097.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1097.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1097.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1097-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1097-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1097-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1097-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1097-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1097-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1097-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1097-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1097-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1097-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1097-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1097-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1097-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1097-01B-01D-0519-06.seg.txt TCGA-12-1097-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1097-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1097-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1097-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1097-01B-01R-0522-01.data.txt GBM-12-1098-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1098.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1098.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1098.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1098.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1098-01C-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1098-01C-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1098-01C-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1098-01C-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1098-01C-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1098-01C-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1098-01C-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1098-01C-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1098-01C-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1098-01C-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1098-01C-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1098-01C-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1098-01C-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1098-01C-01D-0519-06.seg.txt TCGA-12-1098-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1098-01C-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1098-01C-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1098-01C-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1098-01C-01R-0522-01.data.txt GBM-12-1099-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1099.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-12-1099.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1099.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-12-1099.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-12-1099-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-12-1099-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-12-1099-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1099-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-12-1099-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-12-1099-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1099-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-12-1099-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1099-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1099-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1099-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-12-1099-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1099-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-12-1099-01A-01D-0519-06.seg.txt TCGA-12-1099-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1099-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1099-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-12-1099-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-12-1099-01A-01R-0522-01.data.txt GBM-12-1597-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-1597.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-1597.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-12-1597.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-12-1597.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-12-1597-01B-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1597-01B-01T-0919-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-12-1597-01B-21-1898-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-1597-01B-01R-1849-01.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-12-1597-01B-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-12-1597-01B-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-12-1597-01B-01D-0913-06.seg.txt TCGA-12-1597-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-1597-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-1597-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1597-01B-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1597-01B-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-12-1597-01B-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-12-1597-01B-01R-0916-01.data.txt GBM-12-1598-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-12-1598.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-12-1598-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-12-1598-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1598-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1598-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1598-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1598-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1598-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1598-01A-01D-0593-06.seg.txt TCGA-12-1598-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1598-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1598-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-12-1598-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-12-1598-01A-01R-0596-01.data.txt GBM-12-1599-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-12-1599.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-12-1599-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-12-1599-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-12-1599-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-12-1599-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1599-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-12-1599-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-12-1599-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1599-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1599-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1599-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1599-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1599-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1599-01A-01D-0593-06.seg.txt TCGA-12-1599-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1599-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1599-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-12-1599-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-12-1599-01A-01R-0596-01.data.txt GBM-12-1600-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-12-1600.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-12-1600.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-12-1600.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-12-1600.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-12-1600-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-12-1600-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-12-1600-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-12-1600-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-12-1600-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-12-1600-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1600-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-12-1600-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1600-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1600-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1600-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1600-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1600-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1600-01A-01D-0593-06.seg.txt TCGA-12-1600-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1600-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1600-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-12-1600-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-12-1600-01A-01R-0596-01.data.txt GBM-12-1601-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-12-1601.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-12-1601.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-12-1601-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-12-1601-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-12-1601-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-12-1601-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-12-1601-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-12-1601-01A-01D-0595-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-12-1601-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1601-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1601-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1601-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1601-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1601-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1601-01A-01D-0593-06.seg.txt TCGA-12-1601-01 GBM-12-1602-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-12-1602.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-12-1602.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-12-1602.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-12-1602.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-12-1602-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-12-1602-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-12-1602-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-12-1602-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-12-1602-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-12-1602-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-1602-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-12-1602-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1602-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1602-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1602-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-12-1602-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1602-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-12-1602-01A-01D-0593-06.seg.txt TCGA-12-1602-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-1602-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-1602-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-12-1602-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-12-1602-01A-01R-0596-01.data.txt GBM-12-3644-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-3644.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-3644.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-12-3644.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-12-3644.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-12-3644-01A-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-12-3644-01A-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-12-3644-01A-01R-0917-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3644-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3644-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3644-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3644-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-12-3644-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-12-3644-01A-01D-0913-06.seg.txt TCGA-12-3644-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-3644-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-3644-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-12-3644-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-12-3644-01A-01R-0916-01.data.txt GBM-12-3646-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-3646.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-3646.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-12-3646.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-12-3646-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-12-3646-01A-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-3646-01A-01T-0919-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-12-3646-01A-22-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-12-3646-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3646-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3646-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3646-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3646-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-12-3646-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-12-3646-01A-01D-0913-06.seg.txt TCGA-12-3646-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-3646-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-3646-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-12-3646-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-12-3646-01A-01R-0916-01.data.txt GBM-12-3648-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-3648.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-3648.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-12-3648.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-12-3648.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-12-3648-01A-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-12-3648-01A-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-12-3648-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-12-3648-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-12-3648-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-12-3648-01A-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-3648-01A-01T-0919-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-12-3648-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3648-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3648-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3648-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3648-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-12-3648-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-12-3648-01A-01D-0913-06.seg.txt TCGA-12-3648-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-12-3648-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-12-3648-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-12-3648-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-12-3648-01A-01R-0916-01.data.txt GBM-12-3649-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-3649.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-12-3649.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-12-3649.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-12-3649-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3649-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3649-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3649-01A-01D-0911-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-12-3651-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3651-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3651-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-12-3651-01A-01D-0911-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-5295-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-12-5295-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-12-5295-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-12-5295-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-12-5295-01A-01R-1482-01.data.txt GBM-12-5299-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-12-5299.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-12-5299.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-12-5299.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-12-5299.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.6.3.0/TCGA-12-5299-01A-02D-1481-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-5299-01A-02T-1485-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-5299-01A-02R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-5299-01A-02R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-5299-01A-02R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-5299-01A-02R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-12-5299-01A-02R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-12-5299-01A-02D-1479-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-12-5299-01A-02D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-12-5299-01A-02D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-12-5299-01A-02D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-12-5299-01A-02D-1479-01.seg.txt TCGA-12-5299-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-5299-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-5299-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-12-5299-01A-02R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-12-5299-01A-02R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-12-5299-01A-02R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-12-5299-01A-02R-1482-01.data.txt GBM-12-5301-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-12-5301.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-12-5301.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-12-5301.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-12-5301.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.6.3.0/TCGA-12-5301-01A-01D-1481-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-12-5301-01A-01T-1485-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-12-5301-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-12-5301-01A-01D-1479-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-12-5301-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-12-5301-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-12-5301-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-12-5301-01A-01D-1479-01.seg.txt TCGA-12-5301-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-5301-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-12-5301-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-12-5301-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-12-5301-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-12-5301-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-12-5301-01A-01R-1482-01.data.txt GBM-14-0736-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-0736.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-0736.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-0736.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-0736.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-0736-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-0736-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-0736-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-0736-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-0736-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-0736-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-0736-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-0736-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0736-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0736-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0736-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0736-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-0736-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-0736-01A-01D-0519-06.seg.txt TCGA-14-0736-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0736-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-0736-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-0736-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-0736-01A-01R-0522-01.data.txt GBM-14-0740-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-0740.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-0740.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-0740.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-0740.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-14-0740-01B-01D-1844-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-14-0740-01B-01D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-0740-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-0740-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-0740-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-0740-01B-01D-1842-01.seg.txt TCGA-14-0740-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0740-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0740-01.maf.txt GBM-14-0781-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-14-0781.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-14-0781.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-14-0781.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-14-0781.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-14-0781-01B-01D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0781-01B-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0781-01B-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0781-01B-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0781-01B-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0781-01B-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-14-0781-01B-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-14-0781-01B-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-14-0781-01B-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-14-0781-01B-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-14-0781-01B-01D-1694-01.seg.txt TCGA-14-0781-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0781-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0781-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-14-0781-01B-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-14-0781-01B-01R-1698-01.data.txt GBM-14-0783-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-0783.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-0783.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-0783.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-0783.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-0783-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-0783-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-0783-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-0783-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-0783-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-0783-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-0783-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-0783-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0783-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0783-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0783-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0783-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-0783-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-0783-01B-01D-0519-06.seg.txt TCGA-14-0783-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0783-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-0783-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-0783-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-0783-01B-01R-0522-01.data.txt GBM-14-0786-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-0786.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-0786.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-0786.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-0786.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-0786-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-0786-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-0786-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-0786-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-0786-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-0786-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-0786-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-0786-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0786-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0786-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0786-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-0786-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-0786-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-0786-01B-01D-0519-06.seg.txt TCGA-14-0786-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0786-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0786-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0786-01B-01R-0524-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-14-0790-01B-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-14-0790-01B-01D-0786-06.seg.txt TCGA-14-0790-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0790-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0790-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0790-01B-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-0790-01B-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-14-0790-01B-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-14-0790-01B-01R-0789-01.data.txt GBM-14-0812-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-0812.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-0812.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0812-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0812-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0812-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0812-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-0812-01B-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-0812-01B-01D-0593-06.seg.txt TCGA-14-0812-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0812-01B-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-0812-01B-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-0812-01B-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-0812-01B-01R-0596-01.data.txt GBM-14-0813-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-14-0813.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-14-0813.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-14-0813.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-14-0813-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0813-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0813-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0813-01A-01D-0384-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0817-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0817-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0817-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0817-01A-01R-1849-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-0817-01A-01R-1849-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-14-0817-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0817-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0817-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0817-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0817-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-14-0817-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-14-0817-01A-01D-0386-06.seg.txt TCGA-14-0817-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0817-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0817-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0817-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-0817-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-14-0817-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-14-0817-01A-01R-0389-01.data.txt GBM-14-0862-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-0862.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-0862.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-0862.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-0862.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-14-0862-01B-01D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-14-0862-01B-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-14-0862-01B-01D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-0862-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-0862-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-0862-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-0862-01B-01D-1842-01.seg.txt TCGA-14-0862-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0862-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-0862-01.maf.txt GBM-14-0865-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-0865.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-0865.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-0865.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-0865-01B-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-14-0865-01B-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-0865-01B-01T-0656-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-0865-01B-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0865-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0865-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0865-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0865-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-0865-01B-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-0865-01B-01D-0593-06.seg.txt TCGA-14-0865-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0865-01B-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-0865-01B-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-0865-01B-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-0865-01B-01R-0596-01.data.txt GBM-14-0866-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-0866.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-0866.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-0866.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-0866.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-14-0866-01B-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-14-0866-01B-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-14-0866-01B-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-0866-01B-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-0866-01B-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-14-0866-01B-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-0866-01B-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-0866-01B-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0866-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0866-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0866-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-0866-01B-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-0866-01B-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-0866-01B-01D-0593-06.seg.txt TCGA-14-0866-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0866-01B-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-0866-01B-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-0866-01B-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-0866-01B-01R-0596-01.data.txt GBM-14-0867-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-14-0867.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-14-0867.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-14-0867.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-14-0867-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-14-0867-01A-01D-0386-06.seg.txt TCGA-14-0867-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-0867-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-0867-01A-01R-0388-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-14-0871-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0871-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0871-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-14-0871-01A-01D-0384-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1034-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1034-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1034-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1034-01A-01D-0519-06.seg.txt TCGA-14-1034-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1034-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1034-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1034-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1034-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1034-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1034-01A-01R-0522-01.data.txt GBM-14-1037-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1037.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1037.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1037.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1037.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-14-1037-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-14-1037-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-14-1037-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1037-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1037-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-14-1037-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1037-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-1037-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1037-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1037-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1037-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1037-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1037-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1037-01A-01D-0593-06.seg.txt TCGA-14-1037-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1037-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1037-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1037-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1037-01A-01R-0596-01.data.txt GBM-14-1043-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-1043.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-1043.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-1043.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-1043.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-14-1043-01B-11D-1844-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-14-1043-01B-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1043-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1043-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1043-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1043-01B-11D-1842-01.seg.txt TCGA-14-1043-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1043-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1043-01.maf.txt GBM-14-1395-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-1395.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-1395.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-1395.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-1395.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-14-1395-01B-11D-1844-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-14-1395-01B-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1395-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1395-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1395-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1395-01B-11D-1842-01.seg.txt TCGA-14-1395-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1395-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1395-01.maf.txt GBM-14-1396-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1396.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1396.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1396.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1396.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-1396-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-1396-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-1396-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1396-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1396-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-1396-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1396-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-1396-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1396-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1396-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1396-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1396-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1396-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1396-01A-01D-0519-06.seg.txt TCGA-14-1396-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1396-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1396-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1396-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1396-01A-01R-0522-01.data.txt GBM-14-1401-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1401.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1401.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1401.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1401.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-1401-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-1401-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-1401-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1401-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1401-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-1401-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1401-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-1401-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1401-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1401-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1401-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1401-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1401-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1401-01A-01D-0519-06.seg.txt TCGA-14-1401-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1401-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1401-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1401-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1401-01A-01R-0522-01.data.txt GBM-14-1402-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1402.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1402.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1402.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1402.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-1402-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-1402-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-1402-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1402-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1402-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-1402-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1402-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-1402-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1402-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1402-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1402-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1402-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1402-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1402-01A-01D-0519-06.seg.txt TCGA-14-1402-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1402-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1402-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1402-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1402-01A-01R-0522-01.data.txt GBM-14-1450-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-1450.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-14-1450.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-1450.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-14-1450.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-14-1450-01B-01D-1844-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-14-1450-01B-01D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1450-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1450-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1450-01B-01D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-14-1450-01B-01D-1842-01.seg.txt TCGA-14-1450-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1450-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1450-01.maf.txt GBM-14-1451-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1451.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1451.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1451.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1451.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-1451-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-1451-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-1451-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1451-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1451-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-1451-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1451-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-1451-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1451-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1451-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1451-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1451-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1451-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1451-01A-01D-0519-06.seg.txt TCGA-14-1451-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1451-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1451-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1451-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1451-01A-01R-0522-01.data.txt GBM-14-1452-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1452.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1452.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1452.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1452.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-1452-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-1452-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-1452-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1452-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1452-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-1452-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1452-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-1452-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1452-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1452-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1452-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1452-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1452-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1452-01A-01D-0519-06.seg.txt TCGA-14-1452-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1452-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1452-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1452-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1452-01A-01R-0522-01.data.txt GBM-14-1453-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1453.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1453.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1453.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1453.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-1453-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-1453-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-1453-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1453-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1453-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-1453-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1453-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-1453-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1453-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1453-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1453-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1453-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1453-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1453-01A-01D-0519-06.seg.txt TCGA-14-1453-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1453-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1453-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1453-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1453-01A-01R-0522-01.data.txt GBM-14-1454-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1454.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1454.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1454.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1454.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-1454-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1454-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-1454-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1454-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1454-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1454-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1454-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1454-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1454-01A-01D-0519-06.seg.txt TCGA-14-1454-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1454-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1454-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1454-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1454-01A-01R-0522-01.data.txt GBM-14-1455-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1455.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1455.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1455.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1455.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-14-1455-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-14-1455-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-14-1455-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1455-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1455-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-14-1455-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1455-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-1455-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1455-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1455-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1455-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1455-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1455-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1455-01A-01D-0593-06.seg.txt TCGA-14-1455-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1455-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1455-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1455-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1455-01A-01R-0596-01.data.txt GBM-14-1456-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-14-1456.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-14-1456.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-14-1456.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-14-1456.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-14-1456-01B-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-14-1456-01B-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-14-1456-01C-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-14-1456-01C-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-14-1456-01C-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-14-1456-01B-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1456-01B-01T-0792-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-14-1456-01B-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-14-1456-01B-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-14-1456-01B-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-14-1456-01B-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-14-1456-01B-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-14-1456-01B-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-14-1456-01B-01D-0786-06.seg.txt TCGA-14-1456-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1456-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1456-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1456-01C-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1456-01C-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-14-1456-01C-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-14-1456-01C-01R-0789-01.data.txt GBM-14-1458-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1458.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1458.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1458.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1458.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-14-1458-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-14-1458-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-14-1458-01A-01R-0597-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1458-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1458-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1458-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1458-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1458-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1458-01A-01D-0593-06.seg.txt TCGA-14-1458-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1458-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1458-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1458-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1458-01A-01R-0596-01.data.txt GBM-14-1459-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1459.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-14-1459.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1459.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-14-1459.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-14-1459-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-14-1459-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-14-1459-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1459-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-14-1459-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-14-1459-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1459-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-14-1459-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1459-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1459-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1459-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-14-1459-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1459-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-14-1459-01A-01D-0519-06.seg.txt TCGA-14-1459-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1459-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1459-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-14-1459-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-14-1459-01A-01R-0522-01.data.txt GBM-14-1794-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1794.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1794.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1794.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1794.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-14-1794-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-14-1794-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-14-1794-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1794-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1794-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-14-1794-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1794-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-1794-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1794-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1794-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1794-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1794-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1794-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1794-01A-01D-0593-06.seg.txt TCGA-14-1794-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1794-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1794-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1794-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1794-01A-01R-0596-01.data.txt GBM-14-1795-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1795.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1795.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1795.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1795.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-14-1795-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-14-1795-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-14-1795-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1795-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1795-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-14-1795-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1795-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-1795-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1795-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1795-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1795-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1795-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1795-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1795-01A-01D-0593-06.seg.txt TCGA-14-1795-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1795-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1795-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1795-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1795-01A-01R-0596-01.data.txt GBM-14-1821-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1821.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1821.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1821.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1821.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-14-1821-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-14-1821-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-14-1821-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1821-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-14-1821-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-14-1821-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-1821-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-1821-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1821-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1821-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1821-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1821-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1821-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1821-01A-01D-0593-06.seg.txt TCGA-14-1821-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1821-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1821-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1821-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1821-01A-01R-0596-01.data.txt GBM-14-1823-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1823.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1823.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-14-1823.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1823-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1823-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1823-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1823-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1823-01A-01D-0593-06.seg.txt TCGA-14-1823-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1823-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1823-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1823-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1823-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1823-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1823-01A-01R-0596-01.data.txt GBM-14-1825-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1825.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1825.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-1825-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1825-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1825-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1825-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1825-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1825-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1825-01A-01D-0593-06.seg.txt TCGA-14-1825-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1825-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1825-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1825-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1825-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1825-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1825-01A-01R-0596-01.data.txt GBM-14-1827-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1827.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-1827-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1827-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1827-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1827-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1827-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1827-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1827-01A-01D-0593-06.seg.txt TCGA-14-1827-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1827-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1827-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1827-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1827-01A-01R-0596-01.data.txt GBM-14-1829-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1829.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-14-1829.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-14-1829-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1829-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1829-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1829-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-14-1829-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1829-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-14-1829-01A-01D-0593-06.seg.txt TCGA-14-1829-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1829-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-1829-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-1829-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-1829-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-14-1829-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-14-1829-01A-01R-0596-01.data.txt GBM-14-2554-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-14-2554.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-14-2554.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-14-2554.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-14-2554.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-14-2554-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-14-2554-01A-01D-0787-02.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-14-2554-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-14-2554-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-14-2554-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-14-2554-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-14-2554-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-14-2554-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-14-2554-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-14-2554-01A-01D-0786-06.seg.txt TCGA-14-2554-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-2554-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-2554-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-2554-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-2554-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-14-2554-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-14-2554-01A-01R-0789-01.data.txt GBM-14-2555-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-14-2555.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-14-2555.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-14-2555.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-14-2555.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-14-2555-01B-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-14-2555-01B-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-14-2555-01B-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-14-2555-01B-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-14-2555-01B-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-14-2555-01B-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-2555-01B-01T-0919-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-14-2555-01B-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-14-2555-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-14-2555-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-14-2555-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-14-2555-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-14-2555-01B-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-14-2555-01B-01D-0913-06.seg.txt TCGA-14-2555-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-2555-01B-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-2555-01B-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-14-2555-01B-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-14-2555-01B-01R-0916-01.data.txt GBM-14-3476-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-14-3476.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-14-3476.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-14-3476.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-14-3476.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-14-3476-01B-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-14-3476-01B-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-3476-01B-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-14-3476-01B-01D-1224-01.birdseed.txt TCGA-14-3476 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-3476-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-3476-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-14-3476-01B-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-14-3476-01B-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-14-3476-01B-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-14-3476-01B-01R-1230-01.data.txt GBM-14-3477-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-14-3477.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-14-3477.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-14-3477.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-14-3477.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-14-3477-01A-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-14-3477-01A-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-14-3477-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-14-3477-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-14-3477-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-14-3477-01A-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-3477-01A-01T-0919-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-14-3477-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-14-3477-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-14-3477-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-14-3477-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-14-3477-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-14-3477-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-14-3477-01A-01D-0913-06.seg.txt TCGA-14-3477-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-14-3477-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-14-3477-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-14-3477-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-14-3477-01A-01R-0916-01.data.txt GBM-14-4157-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-14-4157.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-14-4157.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-14-4157.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-14-4157.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-14-4157-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-14-4157-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-14-4157-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-14-4157-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-14-4157-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-14-4157-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-14-4157-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-14-4157-01A-01D-1224-01.seg.txt TCGA-14-4157-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-4157-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-14-4157-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-14-4157-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-14-4157-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-14-4157-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-14-4157-01A-01R-1230-01.data.txt GBM-15-0742-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-15-0742.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.8.39.0/TCGA-15-0742.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-15-0742.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.8.40.0/TCGA-15-0742.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-244A.Level_3.10.3.0/TCGA-15-0742-01A-01D-0336-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.8.2.0/TCGA-15-0742-01A-01D-0334-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.8.2.0/TCGA-15-0742-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-15-0742-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.8.2.0/TCGA-15-0742-01A-01R-0339-03.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-15-0742-01A-01T-0341-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-0742-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-0742-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-0742-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-0742-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-0742-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.8.2002.0/TCGA-15-0742-01A-01D-0333-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-15-0742-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-15-0742-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-15-0742-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.8.2002.0/TCGA-15-0742-01A-01D-0333-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-15-0742-01A-01D-0335-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.7.2.0/TCGA-15-0742-01A-01D-0335-06.seg.txt TCGA-15-0742-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-15-0742-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-15-0742-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-15-0742-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-15-0742-01A-01R-0340-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.8.1007.0/TCGA-15-0742-01A-01R-0338-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.8.1007.0/TCGA-15-0742-01A-01R-0338-01.data.txt GBM-15-1444-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-15-1444.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-15-1444.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-15-1444-01A-02D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-1444-01A-02R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-1444-01A-02R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-1444-01A-02R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-1444-01A-02R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-15-1444-01A-02R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-15-1444-01A-02D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-15-1444-01A-02D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-15-1444-01A-02D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-15-1444-01A-02D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-15-1444-01A-02D-1694-01.seg.txt TCGA-15-1444-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-15-1444-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-15-1444-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-15-1444-01A-02R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-15-1444-01A-02R-1698-01.data.txt GBM-15-1446-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-15-1446.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-15-1446.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-15-1446.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-15-1446.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-15-1446-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-15-1446-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-15-1446-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-15-1446-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-15-1446-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-15-1446-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-15-1446-01A-01T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-15-1446-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-15-1446-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1446-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1446-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1446-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1446-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-15-1446-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-15-1446-01A-01D-0519-06.seg.txt TCGA-15-1446-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-15-1446-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-15-1446-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-15-1446-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-15-1446-01A-01R-0522-01.data.txt GBM-15-1447-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-15-1447.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-15-1447.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-15-1447.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-15-1447.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-15-1447-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-15-1447-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-15-1447-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-15-1447-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-15-1447-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-15-1447-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-15-1447-01A-01T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-15-1447-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-15-1447-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1447-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1447-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1447-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1447-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-15-1447-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-15-1447-01A-01D-0519-06.seg.txt TCGA-15-1447-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-15-1447-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-15-1447-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-15-1447-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-15-1447-01A-01R-0522-01.data.txt GBM-15-1449-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-15-1449.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-15-1449.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-15-1449-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1449-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1449-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1449-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-15-1449-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-15-1449-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-15-1449-01A-01D-0519-06.seg.txt TCGA-15-1449-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-15-1449-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-15-1449-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-15-1449-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-15-1449-01A-01R-0522-01.data.txt GBM-16-0846-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0846.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0846.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-0846-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-0846-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-0846-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-0846-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-0846-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-16-0846-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0846-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0846-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0846-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0846-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0846-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0846-01A-01D-0386-06.seg.txt TCGA-16-0846-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-16-0846-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-16-0846-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-0846-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-0846-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-16-0846-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-16-0846-01A-01R-0389-01.data.txt GBM-16-0848-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0848.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0848.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-16-0848.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0848-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0848-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0848-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0848-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0848-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0848-01A-01D-0386-06.seg.txt TCGA-16-0848-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-0848-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-0848-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-16-0848-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-16-0848-01A-01R-0389-01.data.txt GBM-16-0849-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0849.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0849.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-16-0849.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0849-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0849-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0849-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0849-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0849-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0849-01A-01D-0386-06.seg.txt TCGA-16-0849-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-0849-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-0849-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-16-0849-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-16-0849-01A-01R-0389-01.data.txt GBM-16-0850-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0850.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0850.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-16-0850.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-16-0850-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-16-0850-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-0850-01A-01T-0391-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-16-0850-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0850-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0850-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0850-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0850-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0850-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0850-01A-01D-0386-06.seg.txt TCGA-16-0850-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-0850-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-0850-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-16-0850-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-16-0850-01A-01R-0389-01.data.txt GBM-16-0861-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0861.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.10.31.0/TCGA-16-0861.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.10.32.0/TCGA-16-0861.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.10.2.0/TCGA-16-0861-01A-01R-0390-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.2.5.0/TCGA-16-0861-01A-01D-0392-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-0861-01A-01T-0391-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.10.2002.0/TCGA-16-0861-01A-01D-0384-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0861-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0861-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0861-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.10.2002.0/TCGA-16-0861-01A-01D-0384-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0861-01A-01D-0386-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.8.2.0/TCGA-16-0861-01A-01D-0386-06.seg.txt TCGA-16-0861-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-16-0861-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-16-0861-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-0861-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-0861-01A-01R-0388-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.10.1007.0/TCGA-16-0861-01A-01R-0389-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.10.1007.0/TCGA-16-0861-01A-01R-0389-01.data.txt GBM-16-1045-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1045.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1045.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1045.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1045.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-16-1045-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-16-1045-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-16-1045-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1045-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1045-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-16-1045-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1045-01B-01T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-1045-01B-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-1045-01B-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-1045-01B-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-1045-01B-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-16-1045-01B-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-16-1045-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1045-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1045-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1045-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1045-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1045-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1045-01B-01D-0519-06.seg.txt TCGA-16-1045-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-16-1045-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-16-1045-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-1045-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-1045-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-16-1045-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-16-1045-01B-01R-0522-01.data.txt GBM-16-1047-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1047.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1047.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1047.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1047.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-16-1047-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-16-1047-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-16-1047-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1047-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1047-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-16-1047-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1047-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-16-1047-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1047-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1047-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1047-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1047-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1047-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1047-01B-01D-0519-06.seg.txt TCGA-16-1047-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-1047-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-1047-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-16-1047-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-16-1047-01B-01R-0522-01.data.txt GBM-16-1048-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-16-1048.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-16-1048.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-16-1048-01B-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-16-1048-01B-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1048-01B-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-16-1048-01B-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-16-1048-01B-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-16-1048-01B-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-16-1048-01B-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-16-1048-01B-01D-1224-01.seg.txt TCGA-16-1048-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-16-1048-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-16-1048-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-16-1048-01B-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-16-1048-01B-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-16-1048-01B-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-16-1048-01B-01R-1230-01.data.txt GBM-16-1055-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1055.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1055.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1055.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1055.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-16-1055-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-16-1055-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-16-1055-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1055-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1055-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-16-1055-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1055-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-16-1055-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1055-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1055-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1055-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1055-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1055-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1055-01B-01D-0519-06.seg.txt TCGA-16-1055-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-1055-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-1055-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-16-1055-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-16-1055-01B-01R-0522-01.data.txt GBM-16-1056-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1056.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1056.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1056.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1056.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-16-1056-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-16-1056-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-16-1056-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1056-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1056-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-16-1056-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1056-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-16-1056-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1056-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1056-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1056-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1056-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1056-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1056-01B-01D-0519-06.seg.txt TCGA-16-1056-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-1056-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-1056-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-16-1056-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-16-1056-01B-01R-0522-01.data.txt GBM-16-1060-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1060.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1060.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1060.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1060.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-16-1060-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-16-1060-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-16-1060-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1060-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1060-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-16-1060-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1060-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-16-1060-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1060-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1060-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1060-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1060-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1060-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1060-01A-01D-0519-06.seg.txt TCGA-16-1060-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-1060-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-1060-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-16-1060-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-16-1060-01A-01R-0522-01.data.txt GBM-16-1062-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1062.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1062.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1062.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1062.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-16-1062-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-16-1062-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-16-1062-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1062-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1062-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-16-1062-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1062-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-16-1062-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1062-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1062-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1062-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1062-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1062-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1062-01A-01D-0519-06.seg.txt TCGA-16-1062-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-1062-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-1062-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-16-1062-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-16-1062-01A-01R-0522-01.data.txt GBM-16-1063-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1063.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-16-1063.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1063.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-16-1063.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-16-1063-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-16-1063-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-16-1063-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1063-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-16-1063-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-16-1063-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1063-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-16-1063-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1063-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1063-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1063-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-16-1063-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1063-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-16-1063-01B-01D-0519-06.seg.txt TCGA-16-1063-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-1063-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-1063-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-16-1063-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-16-1063-01B-01R-0522-01.data.txt GBM-16-1460-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-16-1460.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-16-1460.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-16-1460.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-16-1460.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-16-1460-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-16-1460-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-16-1460-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-16-1460-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-16-1460-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-16-1460-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-16-1460-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-16-1460-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-16-1460-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-16-1460-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-16-1460-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-16-1460-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-16-1460-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-16-1460-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-16-1460-01A-01D-0593-06.seg.txt TCGA-16-1460-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-16-1460-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-16-1460-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-16-1460-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-16-1460-01A-01R-0596-01.data.txt GBM-19-0955-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0955.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0955.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0955.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0955.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-19-0955-01A-02D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-19-0955-01A-02D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-19-0955-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0955-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0955-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-19-0955-01A-02D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-0955-01A-02T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-19-0955-01A-02D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0955-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0955-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0955-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0955-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0955-01A-02D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0955-01A-02D-0519-06.seg.txt TCGA-19-0955-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-0955-01A-02R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-0955-01A-02R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-19-0955-01A-02R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-19-0955-01A-02R-0522-01.data.txt GBM-19-0957-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-0957.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-0957.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-0957.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-0957.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-0957-01C-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-0957-01C-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-0957-01C-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-0957-01C-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-0957-01C-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-0957-01C-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-0957-01C-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-0957-01C-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-0957-01C-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-0957-01C-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-0957-01C-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-0957-01C-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-0957-01C-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-0957-01C-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-0957-01C-01D-0593-06.seg.txt TCGA-19-0957-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-0957-01C-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-0957-01C-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-0957-01C-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-0957-01C-01R-0596-01.data.txt GBM-19-0960-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0960.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0960.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0960.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0960.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-19-0960-01A-02D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-19-0960-01A-02D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-19-0960-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0960-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0960-01A-02R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-19-0960-01A-02D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-0960-01A-02T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-19-0960-01A-02D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0960-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0960-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0960-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0960-01A-02D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0960-01A-02D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0960-01A-02D-0519-06.seg.txt TCGA-19-0960-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-0960-01A-02R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-0960-01A-02R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-19-0960-01A-02R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-19-0960-01A-02R-0522-01.data.txt GBM-19-0962-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0962.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0962.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0962.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0962.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-19-0962-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-19-0962-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-19-0962-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0962-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0962-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-19-0962-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-0962-01B-01T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-0962-01B-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-19-0962-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0962-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0962-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0962-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0962-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0962-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0962-01B-01D-0519-06.seg.txt TCGA-19-0962-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-0962-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-0962-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-19-0962-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-19-0962-01B-01R-0522-01.data.txt GBM-19-0963-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0963.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0963.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0963.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0963.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-19-0963-01B-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-19-0963-01B-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-19-0963-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0963-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0963-01B-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-19-0963-01B-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-0963-01B-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-19-0963-01B-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0963-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0963-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0963-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0963-01B-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0963-01B-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0963-01B-01D-0519-06.seg.txt TCGA-19-0963-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-0963-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-0963-01B-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-19-0963-01B-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-19-0963-01B-01R-0522-01.data.txt GBM-19-0964-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0964.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-0964.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0964.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-0964.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-19-0964-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-19-0964-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-19-0964-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0964-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-0964-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-19-0964-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-0964-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-19-0964-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0964-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0964-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0964-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-0964-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0964-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-0964-01A-01D-0519-06.seg.txt TCGA-19-0964-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-0964-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-0964-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-19-0964-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-19-0964-01A-01R-0522-01.data.txt GBM-19-1385-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1385.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1385.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1385.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1385.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-1385-01A-02D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-1385-01A-02D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-1385-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1385-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1385-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-1385-01A-02D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1385-01A-02T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1385-01A-02D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1385-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1385-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1385-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1385-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1385-01A-02D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1385-01A-02D-0593-06.seg.txt TCGA-19-1385-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1385-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1385-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1385-01A-02R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1385-01A-02R-0596-01.data.txt GBM-19-1386-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1386.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1386.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1386.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1386.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-1386-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-1386-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-1386-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1386-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1386-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-1386-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1386-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-1386-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1386-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1386-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1386-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1386-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1386-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1386-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1386-01A-01D-0593-06.seg.txt TCGA-19-1386-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1386-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1386-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1386-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1386-01A-01R-0596-01.data.txt GBM-19-1387-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1387.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1387.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1387.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1387.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-1387-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-1387-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-1387-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1387-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1387-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-1387-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1387-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1387-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1387-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1387-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1387-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1387-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1387-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1387-01A-01D-0593-06.seg.txt TCGA-19-1387-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1387-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1387-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1387-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1387-01A-01R-0596-01.data.txt GBM-19-1388-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1388.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1388.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1388.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1388.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-1388-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-1388-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-1388-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1388-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1388-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-1388-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1388-01A-01T-0599-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1388-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1388-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1388-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1388-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1388-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1388-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1388-01A-01D-0593-06.seg.txt TCGA-19-1388-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1388-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1388-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1388-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1388-01A-01R-0596-01.data.txt GBM-19-1389-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1389.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1389.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1389.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1389.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-1389-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-1389-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-1389-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1389-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1389-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-1389-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1389-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-1389-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1389-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1389-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1389-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1389-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1389-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1389-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1389-01A-01D-0593-06.seg.txt TCGA-19-1389-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1389-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1389-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1389-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1389-01A-01R-0596-01.data.txt GBM-19-1390-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-1390.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-1390.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-1390.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-1390.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-19-1390-01A-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-19-1390-01A-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-19-1390-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-1390-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-1390-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-19-1390-01A-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1390-01A-01T-0919-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-1390-01A-21-1898-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-1390-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-1390-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-1390-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-1390-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-1390-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-19-1390-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-1390-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-1390-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-1390-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-1390-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-1390-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-1390-01A-01D-0913-06.seg.txt TCGA-19-1390-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-1390-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-1390-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1390-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1390-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-1390-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-1390-01A-01R-0916-01.data.txt GBM-19-1392-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-1392.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-19-1392.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-1392.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-19-1392.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-19-1392-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-19-1392-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-19-1392-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-1392-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-19-1392-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-19-1392-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1392-01A-01T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-1392-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-19-1392-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-1392-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-1392-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-1392-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-19-1392-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-1392-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-19-1392-01A-01D-0519-06.seg.txt TCGA-19-1392-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1392-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1392-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-19-1392-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-19-1392-01A-01R-0522-01.data.txt GBM-19-1786-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1786.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1786.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1786.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1786.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-1786-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-1786-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-1786-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1786-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1786-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-1786-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1786-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-1786-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1786-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1786-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1786-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1786-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1786-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1786-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1786-01A-01D-0593-06.seg.txt TCGA-19-1786-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1786-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1786-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1786-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1786-01A-01R-0596-01.data.txt GBM-19-1787-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-1787.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-1787.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-19-1787-01B-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-1787-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-1787-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-1787-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-1787-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-1787-01B-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-1787-01B-01D-0913-06.seg.txt TCGA-19-1787-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1787-01B-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1787-01B-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-1787-01B-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-1787-01B-01R-0916-01.data.txt GBM-19-1788-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1788.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1788.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1788.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1788.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-1788-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-1788-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-1788-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1788-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1788-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-1788-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1788-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-1788-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1788-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1788-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1788-01A-01D-0593-06.seg.txt TCGA-19-1788-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1788-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1788-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1788-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1788-01A-01R-0596-01.data.txt GBM-19-1789-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1789.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1789.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1789-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1789-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1789-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1789-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1789-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1789-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1789-01A-01D-0593-06.seg.txt TCGA-19-1789-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1789-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1789-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1789-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1789-01A-01R-0596-01.data.txt GBM-19-1790-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-19-1790.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-19-1790.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-19-1790.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-19-1790.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-19-1790-01B-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-19-1790-01B-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1790-01B-01T-1232-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-1790-01B-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-19-1790-01B-01D-1224-01.birdseed.txt TCGA-19-1790 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-1790-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-1790-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-19-1790-01B-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-19-1790-01B-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-19-1790-01B-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-19-1790-01B-01R-1230-01.data.txt GBM-19-1791-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1791.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-19-1791.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1791.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-19-1791.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-19-1791-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-19-1791-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-19-1791-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1791-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-19-1791-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-19-1791-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-1791-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-1791-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-19-1791-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1791-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1791-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1791-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-19-1791-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1791-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-19-1791-01A-01D-0593-06.seg.txt TCGA-19-1791-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-1791-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-1791-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-19-1791-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-19-1791-01A-01R-0596-01.data.txt GBM-19-2619-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2619.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2619.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2619.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2619.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-19-2619-01A-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-19-2619-01A-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-19-2619-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-2619-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-2619-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-19-2619-01A-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-2619-01A-01T-0919-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-2619-01A-03-1900-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2619-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2619-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2619-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2619-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2619-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-19-2619-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2619-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2619-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2619-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2619-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2619-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2619-01A-01D-0913-06.seg.txt TCGA-19-2619-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2619-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2619-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-2619-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-2619-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-2619-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-2619-01A-01R-0916-01.data.txt GBM-19-2620-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2620.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2620.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2620.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2620.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-19-2620-01A-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-19-2620-01A-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-19-2620-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-2620-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-2620-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-19-2620-01A-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-2620-01A-01T-0919-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-2620-01A-03-1900-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2620-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2620-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2620-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2620-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2620-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-19-2620-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2620-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2620-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2620-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2620-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2620-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2620-01A-01D-0913-06.seg.txt TCGA-19-2620-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2620-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2620-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-2620-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-2620-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-2620-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-2620-01A-01R-0916-01.data.txt GBM-19-2621-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2621.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2621.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2621.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2621.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-19-2621-01B-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-19-2621-01B-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-19-2621-01B-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-2621-01B-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-2621-01B-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-19-2621-01B-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-2621-01B-01T-0919-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-19-2621-01B-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2621-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2621-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2621-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2621-01B-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2621-01B-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2621-01B-01D-0913-06.seg.txt TCGA-19-2621-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-2621-01B-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-2621-01B-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-2621-01B-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-2621-01B-01R-0916-01.data.txt GBM-19-2623-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2623.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2623.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2623.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2623.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-19-2623-01A-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-19-2623-01A-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-19-2623-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-2623-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-19-2623-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-19-2623-01A-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-2623-01A-01T-0919-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-19-2623-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2623-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2623-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2623-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2623-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2623-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2623-01A-01D-0913-06.seg.txt TCGA-19-2623-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2623-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2623-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-2623-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-2623-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-2623-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-2623-01A-01R-0916-01.data.txt GBM-19-2624-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2624.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2624.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-19-2624-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2624-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2624-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2624-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2624-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2624-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2624-01A-01D-0913-06.seg.txt TCGA-19-2624-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2624-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2624-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-2624-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-2624-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-2624-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-2624-01A-01R-0916-01.data.txt GBM-19-2625-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2625.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2625-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2625-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2625-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2625-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2625-01A-01D-0913-06.seg.txt TCGA-19-2625-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2625-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2625-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-2625-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-2625-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-2625-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-2625-01A-01R-0916-01.data.txt GBM-19-2629-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2629.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-19-2629.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2629.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-19-2629.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.38.1.0/TCGA-19-2629-01A-01D-0912-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.4.0.0/TCGA-19-2629-01A-01D-0914-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.38.0.0/TCGA-19-2629-01A-01R-0917-03.data.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2629-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2629-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2629-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-2629-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-19-2629-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2629-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2629-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2629-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-19-2629-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2629-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-19-2629-01A-01D-0913-06.seg.txt TCGA-19-2629-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2629-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2629-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-19-2629-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-19-2629-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-19-2629-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-19-2629-01A-01R-0916-01.data.txt GBM-19-2631-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-19-2631.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-19-2631.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-19-2631.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-19-2631.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-19-2631-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-19-2631-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-2631-01A-01T-1232-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-2631-01A-03-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-19-2631-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-19-2631-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-19-2631-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-19-2631-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-19-2631-01A-01D-1224-01.seg.txt TCGA-19-2631-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2631-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-2631-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-19-2631-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-19-2631-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-19-2631-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-19-2631-01A-01R-1230-01.data.txt GBM-19-4065-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.174.6.0/TCGA-19-4065.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.174.6.0/TCGA-19-4065.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.174.7.0/TCGA-19-4065.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.174.7.0/TCGA-19-4065.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.9.3.0/TCGA-19-4065-01A-01D-2004-05.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-4065-01A-01R-2005-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-4065-01A-01R-2005-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-4065-01A-01R-2005-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-4065-01A-01R-2005-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-4065-01A-01R-2005-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.174.2002.0/TCGA-19-4065-01A-01D-2002-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.174.2002.0/TCGA-19-4065-01A-01D-2002-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.174.2002.0/TCGA-19-4065-01A-01D-2002-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.174.2002.0/TCGA-19-4065-01A-01D-2002-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.174.2002.0/TCGA-19-4065-01A-01D-2002-01.seg.txt TCGA-19-4065-01 GBM-19-4068-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-19-4068.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-19-4068.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-19-4068.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-19-4068.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-19-4068-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-19-4068-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-19-4068-01A-01T-1232-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-4068-01A-22-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-19-4068-01A-01D-1224-01.birdseed.txt TCGA-19-4068 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-4068-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-4068-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-19-4068-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-19-4068-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-19-4068-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-19-4068-01A-01R-1230-01.data.txt GBM-19-5947-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5947.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5947.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5947.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5947.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5947-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5947-01A-13-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5947-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5947-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5947-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5947-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5947-01A-11D-1694-01.seg.txt TCGA-19-5947-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5947-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5947-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5947-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5947-01A-11R-1698-01.data.txt GBM-19-5950-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5950.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5950.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5950.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5950.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5950-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5950-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5950-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5950-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5950-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5950-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5950-01A-11D-1694-01.seg.txt TCGA-19-5950-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5950-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5950-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5950-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5950-01A-11R-1698-01.data.txt GBM-19-5951-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5951.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5951.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5951.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5951.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5951-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5951-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5951-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5951-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5951-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5951-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5951-01A-11D-1694-01.seg.txt TCGA-19-5951-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5951-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5951-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5951-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5951-01A-11R-1698-01.data.txt GBM-19-5952-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5952.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5952.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5952.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5952.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5952-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5952-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5952-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5952-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5952-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5952-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5952-01A-11D-1694-01.seg.txt TCGA-19-5952-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5952-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5952-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5952-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5952-01A-11R-1698-01.data.txt GBM-19-5953-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-19-5953.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-19-5953.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-19-5953.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-19-5953.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-19-5953-01B-12D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5953-01B-23-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-19-5953-01B-12D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-19-5953-01B-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-19-5953-01B-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-19-5953-01B-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-19-5953-01B-12D-1842-01.seg.txt TCGA-19-5953-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5953-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5953-01.maf.txt GBM-19-5954-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5954.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5954.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5954.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5954.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5954-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5954-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5954-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5954-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5954-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5954-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5954-01A-11D-1694-01.seg.txt TCGA-19-5954-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5954-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5954-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5954-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5954-01A-11R-1698-01.data.txt GBM-19-5955-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5955.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5955.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5955.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5955.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5955-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5955-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5955-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5955-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5955-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5955-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5955-01A-11D-1694-01.seg.txt TCGA-19-5955-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5955-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5955-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5955-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5955-01A-11R-1698-01.data.txt GBM-19-5956-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5956.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5956.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5956.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5956.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5956-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5956-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5956-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5956-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5956-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5956-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5956-01A-11D-1694-01.seg.txt TCGA-19-5956-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5956-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5956-01A-11R-1698-01.data.txt GBM-19-5958-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5958.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5958.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5958.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5958.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5958-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5958-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5958-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5958-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5958-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5958-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5958-01A-11D-1694-01.seg.txt TCGA-19-5958-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5958-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5958-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5958-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5958-01A-11R-1698-01.data.txt GBM-19-5959-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5959.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5959.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5959.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5959.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5959-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5959-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5959-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5959-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5959-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5959-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5959-01A-11D-1694-01.seg.txt TCGA-19-5959-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5959-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5959-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5959-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5959-01A-11R-1698-01.data.txt GBM-19-5960-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5960.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-19-5960.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5960.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-19-5960.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-19-5960-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-19-5960-01A-13-1900-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-5960-01A-11R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-5960-01A-11R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-5960-01A-11R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-5960-01A-11R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-19-5960-01A-11R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-19-5960-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5960-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5960-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5960-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-19-5960-01A-11D-1694-01.seg.txt TCGA-19-5960-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5960-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-19-5960-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-19-5960-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-19-5960-01A-11R-1698-01.data.txt GBM-26-1438-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-26-1438.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-26-1438.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-26-1438.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-26-1438.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-26-1438-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-26-1438-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-26-1438-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-26-1438-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-26-1438-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-26-1438-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-26-1438-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-26-1438-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1438-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1438-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1438-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1438-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-26-1438-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-26-1438-01A-01D-0519-06.seg.txt TCGA-26-1438-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-26-1438-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-26-1438-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-26-1438-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-26-1438-01A-01R-0522-01.data.txt GBM-26-1439-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-26-1439.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-26-1439.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-26-1439.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-26-1439.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-26-1439-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-26-1439-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-26-1439-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-26-1439-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-26-1439-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-26-1439-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-26-1439-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-26-1439-01A-01D-1224-01.seg.txt TCGA-26-1439-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-26-1439-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-26-1439-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-26-1439-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-26-1439-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-26-1439-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-26-1439-01A-01R-1230-01.data.txt GBM-26-1440-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-26-1440.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-26-1440.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-26-1440.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-26-1440.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-26-1440-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-26-1440-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-26-1440-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-26-1440-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-26-1440-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-26-1440-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-26-1440-01A-01T-0525-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-26-1440-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-26-1440-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1440-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1440-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1440-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1440-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-26-1440-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-26-1440-01A-01D-0519-06.seg.txt TCGA-26-1440-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-26-1440-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-26-1440-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-26-1440-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-26-1440-01A-01R-0522-01.data.txt GBM-26-1442-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-26-1442.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-26-1442.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-26-1442.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-26-1442.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-26-1442-01A-01D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-26-1442-01A-21-1898-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-26-1442-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-26-1442-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-26-1442-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-26-1442-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-26-1442-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-26-1442-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-26-1442-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-26-1442-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-26-1442-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-26-1442-01A-01D-1694-01.seg.txt TCGA-26-1442-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-26-1442-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-26-1442-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-26-1442-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-26-1442-01A-01R-1698-01.data.txt GBM-26-1443-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-26-1443.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.16.34.0/TCGA-26-1443.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-26-1443.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.16.35.0/TCGA-26-1443.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.16.2.0/TCGA-26-1443-01A-01D-0518-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.1.2.0/TCGA-26-1443-01A-01D-0520-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.16.2.0/TCGA-26-1443-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-26-1443-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.16.2.0/TCGA-26-1443-01A-01R-0523-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.3.5.0/TCGA-26-1443-01A-01D-0521-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-26-1443-01A-01T-0525-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.16.2002.0/TCGA-26-1443-01A-01D-0517-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1443-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1443-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1443-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.16.2002.0/TCGA-26-1443-01A-01D-0517-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-26-1443-01A-01D-0519-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.9.1.0/TCGA-26-1443-01A-01D-0519-06.seg.txt TCGA-26-1443-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-26-1443-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-26-1443-01A-01R-0524-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.16.1007.0/TCGA-26-1443-01A-01R-0522-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.16.1007.0/TCGA-26-1443-01A-01R-0522-01.data.txt GBM-26-1799-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-26-1799.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-26-1799.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-26-1799.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-26-1799.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-26-1799-01A-02D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-26-1799-01A-02D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-26-1799-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-26-1799-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-26-1799-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-26-1799-01A-02D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-26-1799-01A-02T-0656-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-26-1799-01A-02D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-26-1799-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-26-1799-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-26-1799-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-26-1799-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-26-1799-01A-02D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-26-1799-01A-02D-0593-06.seg.txt TCGA-26-1799-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-26-1799-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-26-1799-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-26-1799-01A-02R-0596-01.data.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-26-6174-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-26-6174-01.maf.txt GBM-27-1830-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-27-1830.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-27-1830.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-27-1830.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-27-1830-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-27-1830-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-27-1830-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-27-1830-01A-01D-0591-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-1832-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-1832-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-27-1832-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-27-1832-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-27-1832-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-27-1832-01A-01R-0596-01.data.txt GBM-27-1833-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-27-1833.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-27-1833.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-27-1833.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-27-1833-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-27-1833-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-27-1833-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-27-1833-01A-01D-0591-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-27-1835-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-1835-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-1835-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-1835-01A-01D-0784-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-1836-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-1836-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-27-1836-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-27-1836-01A-01R-0791-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-2519-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-2519-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-27-2519-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-27-2519-01A-01R-0791-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-2524-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-2524-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-27-2524-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-27-2524-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-27-2524-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-27-2524-01A-01R-0789-01.data.txt GBM-27-2526-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-27-2526.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-27-2526.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-27-2526.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-2527-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-2527-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-2527-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-2527-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-27-2527-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-27-2527-01A-01D-0786-06.seg.txt TCGA-27-2527-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-2527-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-2527-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-27-2527-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-27-2527-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-27-2527-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-27-2527-01A-01R-0789-01.data.txt GBM-27-2528-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-27-2528.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-27-2528.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-27-2528-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-27-2528-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-2528-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-2528-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-2528-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-27-2528-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-27-2528-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-27-2528-01A-01D-0786-06.seg.txt TCGA-27-2528-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-2528-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-27-2528-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-27-2528-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-27-2528-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-27-2528-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-27-2528-01A-01R-0789-01.data.txt GBM-28-1745-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1745.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1745.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-28-1745.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1745-01B-01D-0593-06.seg.txt TCGA-28-1745-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1745-01B-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1745-01B-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-28-1745-01B-01R-0596-01.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1746-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1746-01A-01D-0593-06.seg.txt TCGA-28-1746-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1746-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1746-01A-01R-0598-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-28-1747-01C-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-1747-01C-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-1747-01C-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-1747-01C-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-1747-01C-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-28-1747-01C-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-28-1747-01C-01D-0786-06.seg.txt TCGA-28-1747-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-1747-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-1747-01.maf.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-28-1749-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1749-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1749-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1749-01A-01D-0591-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-28-1750-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1750-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1750-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1750-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1750-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1750-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1750-01A-01D-0593-06.seg.txt TCGA-28-1750-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1750-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1750-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-28-1750-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-28-1750-01A-01R-0596-01.data.txt GBM-28-1751-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1751.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1751.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1751-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1751-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1751-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1751-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1751-01A-02D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1751-01A-02D-0593-06.seg.txt TCGA-28-1751-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1751-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1751-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-28-1751-01A-02R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-28-1751-01A-02R-0596-01.data.txt GBM-28-1752-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1752.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1752.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-28-1752.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-28-1752-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-28-1752-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-28-1752-01A-01T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-28-1752-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-28-1752-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1752-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1752-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1752-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1752-01A-01D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1752-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1752-01A-01D-0593-06.seg.txt TCGA-28-1752-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1752-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1752-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-28-1752-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-28-1752-01A-01R-0596-01.data.txt GBM-28-1753-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-1753.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-1753.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-1753-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-1753-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1753-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1753-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-28-1753-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-28-1753-01A-01R-0789-01.data.txt GBM-28-1755-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1755.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1755.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-28-1755.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1755-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1755-01A-01D-0593-06.seg.txt TCGA-28-1755-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1755-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1755-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-28-1755-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-28-1755-01A-01R-0596-01.data.txt GBM-28-1756-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-1756.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-1756.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-28-1756.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-1756-01C-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-1756-01C-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-1756-01C-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-1756-01C-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-28-1756-01C-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-28-1756-01C-01D-0786-06.seg.txt TCGA-28-1756-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1756-01C-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1756-01C-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-28-1756-01C-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-28-1756-01C-01R-0789-01.data.txt GBM-28-1757-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1757.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1757.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-28-1757.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-28-1757-01A-02R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-28-1757-01A-02D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-28-1757-01A-02T-0599-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-28-1757-01A-11-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-28-1757-01A-02D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1757-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1757-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1757-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.20.2002.0/TCGA-28-1757-01A-02D-0591-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1757-01A-02D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1757-01A-02D-0593-06.seg.txt TCGA-28-1757-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1757-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1757-01A-02R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-28-1757-01A-02R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-28-1757-01A-02R-0596-01.data.txt GBM-28-1760-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1760.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.20.31.0/TCGA-28-1760.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-28-1760.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.20.32.0/TCGA-28-1760.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.20.2.0/TCGA-28-1760-01A-01D-0592-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.2.1.0/TCGA-28-1760-01A-01D-0594-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.20.2.0/TCGA-28-1760-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-28-1760-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.20.2.0/TCGA-28-1760-01A-01R-0597-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.5.5.0/TCGA-28-1760-01A-01D-0595-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-28-1760-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-28-1760-01A-21-1898-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.20.2002.0/TCGA-28-1760-01A-01D-0591-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1760-01A-01D-0593-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.10.0.0/TCGA-28-1760-01A-01D-0593-06.seg.txt TCGA-28-1760-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-1760-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-1760-01A-01R-0598-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.20.1007.0/TCGA-28-1760-01A-01R-0596-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.20.1007.0/TCGA-28-1760-01A-01R-0596-01.data.txt GBM-28-2499-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-2499.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-2499.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-28-2499.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-28-2499.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-28-2499-01A-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-28-2499-01A-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-2499-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-2499-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-2499-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-2499-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-2499-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-28-2499-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-28-2499-01A-01D-0786-06.seg.txt TCGA-28-2499-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-2499-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-2499-01.maf.txt GBM-28-2501-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-28-2501.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-28-2501.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-28-2501-01A-01D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-28-2501-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-28-2501-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-28-2501-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-28-2501-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-28-2501-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-28-2501-01A-01D-1694-01.seg.txt TCGA-28-2501-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-2501-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-2501-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-28-2501-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-28-2501-01A-01R-1698-01.data.txt GBM-28-2502-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-2502.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-2502.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-28-2502.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-28-2502.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-28-2502-01B-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-28-2502-01B-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-28-2502-01B-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-28-2502-01B-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-28-2502-01B-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-28-2502-01B-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-28-2502-01B-01T-0792-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-28-2502-01B-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2502-01B-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2502-01B-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2502-01B-01D-0784-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-28-2506-01A-02D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2506-01A-02D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2506-01A-02D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2506-01A-02D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2506-01A-02D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-28-2506-01A-02D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-28-2506-01A-02D-0786-06.seg.txt TCGA-28-2506-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-2506-01A-02R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-2506-01A-02R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-28-2506-01A-02R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-28-2506-01A-02R-0789-01.data.txt GBM-28-2509-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-2509.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-2509.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-28-2509-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2509-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2509-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2509-01A-01D-0784-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-28-2509-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-2509-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-28-2509-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-28-2509-01A-01R-0789-01.data.txt GBM-28-2510-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-28-2510.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-28-2513-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-28-2513-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-28-2513-01A-01R-0789-01.data.txt GBM-28-2514-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-2514.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-28-2514.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-28-2514-01A-02D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2514-01A-02D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2514-01A-02D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-28-2514-01A-02D-0784-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-5215-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-5215-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-28-5215-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-28-5215-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-28-5215-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-28-5215-01A-01R-1482-01.data.txt GBM-28-5216-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-28-5216.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-28-5216.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-28-5216.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-5216-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-5216-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-28-5216-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-28-5216-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-28-5216-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-28-5216-01A-01R-1482-01.data.txt GBM-28-5218-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-28-5218.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-28-5218.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-28-5218.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-5218-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-5218-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-28-5218-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-28-5218-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-28-5218-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-28-5218-01A-01R-1482-01.data.txt GBM-28-5219-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-28-5219.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-28-5219.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-28-5219.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-28-5219-01A-01R-1482-01.data.txt GBM-28-5220-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-28-5220.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-28-5220.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-28-5220.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-28-5220.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.6.3.0/TCGA-28-5220-01A-01D-1481-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-28-5220-01A-01T-1485-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-5220-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-5220-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-5220-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-5220-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-28-5220-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-28-5220-01A-01D-1479-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-28-5220-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-28-5220-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-28-5220-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-28-5220-01A-01D-1479-01.seg.txt TCGA-28-5220-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-5220-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-5220-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-28-5220-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-28-5220-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-28-5220-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-28-5220-01A-01R-1482-01.data.txt GBM-28-6450-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-28-6450.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-28-6450.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-28-6450.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-28-6450.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-28-6450-01A-11D-1697-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-28-6450-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-28-6450-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-28-6450-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-28-6450-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-28-6450-01A-11D-1694-01.seg.txt TCGA-28-6450-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-6450-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-28-6450-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-28-6450-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-28-6450-01A-11R-1698-01.data.txt GBM-32-1970-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-32-1970.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-32-1970.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-32-1970.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-32-1970.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-32-1970-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-32-1970-01A-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-32-1970-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-32-1970-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-32-1970-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-32-1970-01A-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1970-01A-01T-0792-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-32-1970-01A-21-1899-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1970-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1970-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1970-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1970-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1970-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-32-1970-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1970-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1970-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1970-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1970-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-32-1970-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-32-1970-01A-01D-0786-06.seg.txt TCGA-32-1970-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1970-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1970-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-32-1970-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-32-1970-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-32-1970-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-32-1970-01A-01R-0789-01.data.txt GBM-32-1973-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1973.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1973.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1973.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1973.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-1973-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-1973-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1973-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-1973-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1973-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1973-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1973-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1973-01A-01D-1224-01.seg.txt TCGA-32-1973-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-1973-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-1973-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-1973-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-1973-01A-01R-1230-01.data.txt GBM-32-1976-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-32-1976.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-32-1976.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-32-1976.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-32-1976.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-32-1976-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-32-1976-01A-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-32-1976-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-32-1976-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-32-1976-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-32-1976-01A-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1976-01A-01T-0792-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-32-1976-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-32-1976-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1976-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1976-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1976-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1976-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-32-1976-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-32-1976-01A-01D-0786-06.seg.txt TCGA-32-1976-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-32-1976-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-32-1976-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-32-1976-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-32-1976-01A-01R-0789-01.data.txt GBM-32-1977-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1977.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1977.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1977.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1977.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-1977-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-1977-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1977-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-1977-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1977-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1977-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1977-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1977-01A-01D-1224-01.seg.txt TCGA-32-1977-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1977-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1977-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-1977-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-1977-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-1977-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-1977-01A-01R-1230-01.data.txt GBM-32-1978-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1978.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1978.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1978.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1978.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-1978-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-1978-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1978-01A-01T-1232-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-32-1978-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-1978-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1978-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1978-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1978-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1978-01A-01D-1224-01.seg.txt TCGA-32-1978-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-1978-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-1978-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-1978-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-1978-01A-01R-1230-01.data.txt GBM-32-1979-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-32-1979.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-32-1979.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-32-1979.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-32-1979.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-32-1979-01A-01D-1697-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-32-1979-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-32-1979-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-32-1979-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-32-1979-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-32-1979-01A-01D-1694-01.seg.txt TCGA-32-1979-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1979-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1979-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-32-1979-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-32-1979-01A-01R-1698-01.data.txt GBM-32-1980-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-32-1980.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-32-1980.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-32-1980.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-32-1980.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-32-1980-01A-01D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1980-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1980-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1980-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1980-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1980-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-32-1980-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-32-1980-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-32-1980-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-32-1980-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-32-1980-01A-01D-1694-01.seg.txt TCGA-32-1980-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1980-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1980-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-32-1980-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-32-1980-01A-01R-1698-01.data.txt GBM-32-1982-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-32-1982.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-32-1982.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-32-1982.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-32-1982.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-32-1982-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-32-1982-01A-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-32-1982-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-32-1982-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-32-1982-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-32-1982-01A-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1982-01A-01T-0792-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-32-1982-01A-21-1899-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1982-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1982-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1982-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1982-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-1982-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-32-1982-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1982-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1982-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1982-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1982-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-32-1982-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-32-1982-01A-01D-0786-06.seg.txt TCGA-32-1982-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1982-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1982-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-32-1982-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-32-1982-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-32-1982-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-32-1982-01A-01R-0789-01.data.txt GBM-32-1986-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-32-1986.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.26.23.0/TCGA-32-1986.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-32-1986.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.26.24.0/TCGA-32-1986.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.26.1.0/TCGA-32-1986-01A-01D-0785-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_GBM.HG-CGH-415K_G4124A.Level_3.3.0.0/TCGA-32-1986-01A-01D-0787-02.seg.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_2.26.1.0/TCGA-32-1986-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-32-1986-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.26.1.0/TCGA-32-1986-01A-01R-0790-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.6.5.0/TCGA-32-1986-01A-01D-0788-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1986-01A-01T-0792-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-32-1986-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.26.2002.0/TCGA-32-1986-01A-01D-0784-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1986-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1986-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1986-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.26.2002.0/TCGA-32-1986-01A-01D-0784-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-32-1986-01A-01D-0786-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.11.0.0/TCGA-32-1986-01A-01D-0786-06.seg.txt TCGA-32-1986-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1986-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1986-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-32-1986-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-32-1986-01A-01R-0791-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.26.1007.0/TCGA-32-1986-01A-01R-0789-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.26.1007.0/TCGA-32-1986-01A-01R-0789-01.data.txt GBM-32-1987-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1987.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1987.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1987.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1987.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-1987-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-1987-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1987-01A-01T-1232-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-32-1987-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-1987-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1987-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1987-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1987-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1987-01A-01D-1224-01.seg.txt TCGA-32-1987-01 /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-1987-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-1987-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-1987-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-1987-01A-01R-1230-01.data.txt GBM-32-1991-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1991.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-1991.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1991.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-1991.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-1991-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-1991-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-1991-01A-01T-1232-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-32-1991-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-1991-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1991-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1991-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1991-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-1991-01A-01D-1224-01.seg.txt TCGA-32-1991-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1991-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-1991-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-1991-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-1991-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-1991-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-1991-01A-01R-1230-01.data.txt GBM-32-2491-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-2491.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-2491.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-2491.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-2491.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-2491-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-2491-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-2491-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-2491-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2491-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2491-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2491-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2491-01A-01D-1224-01.seg.txt TCGA-32-2491-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2491-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2491-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-2491-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-2491-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-2491-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-2491-01A-01R-1230-01.data.txt GBM-32-2494-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-2494.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-2494.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-2494.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-2494.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-2494-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-2494-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-2494-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-2494-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2494-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2494-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2494-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2494-01A-01D-1224-01.seg.txt TCGA-32-2494-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2494-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2494-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-2494-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-2494-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-2494-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-2494-01A-01R-1230-01.data.txt GBM-32-2495-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-2495.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-2495.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-2495.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-2495.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-2495-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-2495-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-2495-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-2495-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2495-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2495-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2495-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2495-01A-01D-1224-01.seg.txt TCGA-32-2495-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2495-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2495-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-2495-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-2495-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-2495-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-2495-01A-01R-1230-01.data.txt GBM-32-2498-TP /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-2498-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-2498-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-2498-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-2498-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2498-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2498-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2498-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-2498-01A-01D-1224-01.seg.txt TCGA-32-2498-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2498-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2498-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-2498-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-2498-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-2498-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-2498-01A-01R-1230-01.data.txt GBM-32-2615-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-32-2615.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-32-2615.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-32-2615.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-2615-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-2615-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-2615-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-32-2615-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-32-2615-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-32-2615-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-32-2615-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-32-2615-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-32-2615-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-32-2615-01A-01D-0913-06.seg.txt TCGA-32-2615-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2615-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2615-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-32-2615-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-32-2615-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-32-2615-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-32-2615-01A-01R-0916-01.data.txt GBM-32-2616-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-32-2616.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-32-2616.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2634-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2634-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-32-2634-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-32-2634-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-32-2634-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-32-2634-01A-01R-0916-01.data.txt GBM-32-2638-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-32-2638.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-32-2638.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-32-2638.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_GBM.HuEx-1_0-st-v2.Level_3.38.0.0/TCGA-32-2638-01A-01R-0917-03.data.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.8.5.0/TCGA-32-2638-01A-01D-0915-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-2638-01A-01T-0919-07.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-2638-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-2638-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-2638-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-2638-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-32-2638-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-32-2638-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-32-2638-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-32-2638-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-32-2638-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-32-2638-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-32-2638-01A-01D-0913-06.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__humanhap550__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_GBM.HumanHap550.Level_3.12.0.0/TCGA-32-2638-01A-01D-0913-06.seg.txt TCGA-32-2638-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2638-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-2638-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-32-2638-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-32-2638-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-32-2638-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-32-2638-01A-01R-0916-01.data.txt GBM-32-4208-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4208.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4208.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-4208.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-4208.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-4208-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-4208-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-4208-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-4208-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4208-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4208-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4208-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4208-01A-01D-1224-01.seg.txt TCGA-32-4208-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4208-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4208-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-4208-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-4208-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-4208-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-4208-01A-01R-1230-01.data.txt GBM-32-4209-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4209.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4209.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-4209.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-4209.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-4209-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-4209-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-4209-01A-01T-1232-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-4209-01A-01D-1224-01.birdseed.txt TCGA-32-4209 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4209-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4209-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-4209-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-4209-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-4209-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-4209-01A-01R-1230-01.data.txt GBM-32-4210-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4210.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4210.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-4210.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-4210.clin.txt /xchip/gdac_data/normalized/diced/gbm/cna__hg_cgh_244a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_GBM.HG-CGH-244A.Level_3.62.1.0/TCGA-32-4210-01A-01D-1227-04.seg.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation27.Level_3.9.5.0/TCGA-32-4210-01A-01D-1228-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-32-4210-01A-01T-1232-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-32-4210-01A-22-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-4210-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4210-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4210-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4210-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4210-01A-01D-1224-01.seg.txt TCGA-32-4210-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4210-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4210-01.maf.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4211-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4211-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4211-01A-01D-1224-01.seg.txt TCGA-32-4211-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4211-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4211-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-4211-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-4211-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-4211-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-4211-01A-01R-1230-01.data.txt GBM-32-4213-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4213.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4213.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-4213.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.62.20.0/TCGA-32-4213.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-4213-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4213-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4213-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4213-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4213-01A-01D-1224-01.seg.txt TCGA-32-4213-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4213-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4213-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-4213-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-4213-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-4213-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-4213-01A-01R-1230-01.data.txt GBM-32-4719-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4719.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.62.19.0/TCGA-32-4719.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-32-4719-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4719-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4719-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4719-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-32-4719-01A-01D-1224-01.seg.txt TCGA-32-4719-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4719-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-32-4719-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.2.0.0/TCGA-32-4719-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.2.0.0/TCGA-32-4719-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.62.1007.0/TCGA-32-4719-01A-01R-1230-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.62.1007.0/TCGA-32-4719-01A-01R-1230-01.data.txt GBM-32-5222-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-32-5222.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-32-5222.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-41-2571-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-41-2571-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-41-2571-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-41-2571-01A-01R-0918-07.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.62.2002.0/TCGA-41-2572-01A-01D-1224-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-41-2572-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-41-2572-01A-01D-1224-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.62.2003.0/TCGA-41-2572-01A-01D-1224-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-41-2575-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-41-2575-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.1.5.0/TCGA-41-2575-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.1.5.0/TCGA-41-2575-01A-01R-0918-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.38.1007.0/TCGA-41-2575-01A-01R-0916-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.38.1007.0/TCGA-41-2575-01A-01R-0916-01.data.txt GBM-41-3392-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-41-3392.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.38.22.0/TCGA-41-3392.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.38.23.0/TCGA-41-3392.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.38.2002.0/TCGA-41-3392-01A-01D-0911-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-41-3392-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-41-3392-01A-01D-0911-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.38.2003.0/TCGA-41-3392-01A-01D-0911-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-41-5651-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-41-5651-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-41-5651-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-41-5651-01A-01D-1694-01.seg.txt TCGA-41-5651-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-41-5651-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-41-5651-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-41-5651-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-41-5651-01A-01R-1698-01.data.txt GBM-41-6646-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-41-6646.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-41-6646-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-41-6646-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-41-6646-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-41-6646-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-41-6646-01A-11D-1842-01.seg.txt TCGA-41-6646-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-41-6646-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-41-6646-01.maf.txt GBM-74-6573-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6573.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6573.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6573-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6573-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6573-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6573-01A-12D-1842-01.seg.txt TCGA-74-6573-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6573-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6573-01.maf.txt GBM-74-6575-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6575.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6575.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-74-6575.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6575-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6575-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6575-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6575-01A-11D-1842-01.seg.txt TCGA-74-6575-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6575-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6575-01.maf.txt GBM-74-6577-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6577.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6577.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-74-6577.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-74-6577.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-74-6577-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-74-6577-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-74-6577-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6577-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6577-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6577-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6577-01A-11D-1842-01.seg.txt TCGA-74-6577-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6577-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6577-01.maf.txt GBM-74-6578-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6578.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6578.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-74-6578.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-74-6578.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-74-6578-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-74-6578-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-74-6578-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6578-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6578-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6578-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6578-01A-11D-1842-01.seg.txt TCGA-74-6578-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6578-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6578-01.maf.txt GBM-74-6581-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6581.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6581.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-74-6581.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6584.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-74-6584.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-74-6584.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-74-6584.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-74-6584-01A-11D-1844-05.data.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6584-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-74-6584-01A-11D-1842-01.seg.txt TCGA-74-6584-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6584-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-74-6584-01.maf.txt GBM-76-4925-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-76-4925.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4925-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4925-01A-01D-1479-01.seg.txt TCGA-76-4925-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4925-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4925-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-76-4925-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-76-4925-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-76-4925-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-76-4925-01A-01R-1482-01.data.txt GBM-76-4926-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-76-4926.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-76-4926-01B-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-76-4926-01B-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-76-4926-01B-01D-1479-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4926-01B-01D-1479-01.seg.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4926-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-76-4926-01B-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-76-4926-01B-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-76-4926-01B-01R-1482-01.data.txt 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/xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4931-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-76-4931-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-76-4931-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-76-4931-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-76-4931-01A-01R-1482-01.data.txt GBM-76-4932-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-76-4932.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-76-4932.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-76-4932.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-76-4932.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.6.3.0/TCGA-76-4932-01A-01D-1481-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-76-4932-01A-01T-1485-07.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-4932-01A-22-1899-20.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-76-4932-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-76-4932-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-76-4932-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-76-4932-01A-01R-1850-01.data.txt /xchip/gdac_data/normalized/diced/gbm/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_GBM.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-76-4932-01A-01R-1850-01.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-76-4932-01A-01D-1479-01.birdseed.txt TCGA-76-4932 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4932-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4932-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-76-4932-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-76-4932-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-76-4932-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-76-4932-01A-01R-1482-01.data.txt GBM-76-4934-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-76-4934.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-76-4934.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-76-4934.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-76-4934.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.6.3.0/TCGA-76-4934-01A-01D-1481-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-76-4934-01A-01T-1485-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-76-4934-01A-01D-1479-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4934-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4934-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4934-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4934-01A-01D-1479-01.seg.txt TCGA-76-4934-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4934-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4934-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-76-4934-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-76-4934-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-76-4934-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-76-4934-01A-01R-1482-01.data.txt GBM-76-4935-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-76-4935.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.79.13.0/TCGA-76-4935.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-76-4935.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.79.14.0/TCGA-76-4935.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.6.3.0/TCGA-76-4935-01A-01D-1481-05.data.txt /xchip/gdac_data/normalized/diced/gbm/mirna__h_mirna_8x15k__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_GBM.H-miRNA_8x15K.Level_3.1.8.0/TCGA-76-4935-01A-01T-1485-07.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.79.2002.0/TCGA-76-4935-01A-01D-1479-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4935-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4935-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4935-01A-01D-1479-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.79.2002.0/TCGA-76-4935-01A-01D-1479-01.seg.txt TCGA-76-4935-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4935-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-4935-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_2.3.0.0/TCGA-76-4935-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_GBM.AgilentG4502A_07_2.Level_3.3.0.0/TCGA-76-4935-01A-01R-1484-07.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.79.1007.0/TCGA-76-4935-01A-01R-1482-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.79.1007.0/TCGA-76-4935-01A-01R-1482-01.data.txt GBM-76-6191-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6191.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6191.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6191.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6191.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-76-6191-01A-12D-1697-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-76-6191-01A-12D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6191-01A-12D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6191-01A-12D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6191-01A-12D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6191-01A-12D-1694-01.seg.txt TCGA-76-6191-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6191-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6191-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-76-6191-01A-13R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-76-6191-01A-13R-1698-01.data.txt GBM-76-6192-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6192.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6192.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6192.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6192.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-76-6192-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6192-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-76-6192-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6192-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6192-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6192-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6192-01A-11D-1694-01.seg.txt TCGA-76-6192-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6192-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6192-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-76-6192-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-76-6192-01A-11R-1698-01.data.txt GBM-76-6193-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6193.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6193.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6193.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6193.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-76-6193-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6193-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-76-6193-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6193-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6193-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6193-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6193-01A-11D-1694-01.seg.txt TCGA-76-6193-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6193-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6193-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-76-6193-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-76-6193-01A-11R-1698-01.data.txt GBM-76-6280-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6280.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6280.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6280.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6280.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6280-01A-21D-1844-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6280-01A-21D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6280-01A-21D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6280-01A-21D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6280-01A-21D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6280-01A-21D-1842-01.seg.txt TCGA-76-6280-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6280-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6280-01.maf.txt GBM-76-6282-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6282.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6282.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6282.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6282.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-76-6282-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6282-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-76-6282-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6282-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6282-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6282-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6282-01A-11D-1694-01.seg.txt TCGA-76-6282-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6282-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6282-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-76-6282-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-76-6282-01A-11R-1698-01.data.txt GBM-76-6283-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6283.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6283.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6283-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6283-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6283-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6283-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6283-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6283-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6283-01A-11D-1842-01.seg.txt TCGA-76-6283-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6283-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6283-01.maf.txt GBM-76-6285-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6285.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-76-6285.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6285.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-76-6285.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-76-6285-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6285-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-76-6285-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6285-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6285-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6285-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-76-6285-01A-11D-1694-01.seg.txt TCGA-76-6285-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6285-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6285-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-76-6285-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-76-6285-01A-11R-1698-01.data.txt GBM-76-6286-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6286.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6286.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6286.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6286.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6286-01A-11D-1844-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6286-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6286-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6286-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6286-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6286-01A-11D-1842-01.seg.txt TCGA-76-6286-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6286-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6286-01.maf.txt GBM-76-6656-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6656.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6656.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6656.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6656.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6656-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6656-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6656-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6656-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6656-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6656-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6656-01A-11D-1842-01.seg.txt TCGA-76-6656-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6656-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6656-01.maf.txt GBM-76-6657-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6657.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6657.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6657.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6657.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6657-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6657-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6657-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6657-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6657-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6657-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6657-01A-11D-1842-01.seg.txt TCGA-76-6657-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6657-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6657-01.maf.txt GBM-76-6660-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6660.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6660.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6660-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6660-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6660-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6660-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6660-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6660-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6660-01A-11D-1842-01.seg.txt TCGA-76-6660-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6660-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6660-01.maf.txt GBM-76-6661-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6661.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6661-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6661-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6661-01B-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6661-01B-11D-1842-01.seg.txt TCGA-76-6661-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6661-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6661-01.maf.txt GBM-76-6662-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6662.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6662.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6662.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6662.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6662-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6662-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6662-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6662-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6662-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6662-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6662-01A-11D-1842-01.seg.txt TCGA-76-6662-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6662-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6662-01.maf.txt GBM-76-6663-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6663.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6663.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6663.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6663.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6663-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6663-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6663-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6663-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6663-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6663-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6663-01A-11D-1842-01.seg.txt TCGA-76-6663-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6663-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6663-01.maf.txt GBM-76-6664-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6664.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-76-6664.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6664.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.130.14.0/TCGA-76-6664.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.8.3.0/TCGA-76-6664-01A-11D-1844-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-76-6664-01A-13-1900-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.130.2002.0/TCGA-76-6664-01A-11D-1842-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6664-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6664-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6664-01A-11D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-76-6664-01A-11D-1842-01.seg.txt TCGA-76-6664-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6664-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-76-6664-01.maf.txt GBM-81-5910-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-81-5910.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-81-5910.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-81-5910.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-81-5910.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-81-5910-01A-11D-1697-05.data.txt /xchip/gdac_data/normalized/diced/gbm/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_GBM.MDA_RPPA_Core.Level_3.1.0.0/TCGA-81-5910-01A-21-1899-20.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-81-5910-01A-11D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-81-5910-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-81-5910-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-81-5910-01A-11D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-81-5910-01A-11D-1694-01.seg.txt TCGA-81-5910-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-81-5910-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-81-5910-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-81-5910-01A-11R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-81-5910-01A-11R-1698-01.data.txt GBM-81-5911-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.130.13.0/TCGA-81-5911.clin.txt 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/xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-81-5911-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-81-5911-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-81-5911-01A-12D-1842-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.130.2002.0/TCGA-81-5911-01A-12D-1842-01.seg.txt TCGA-81-5911-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-81-5911-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-81-5911-01.maf.txt GBM-87-5896-TP /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-87-5896.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_GBM.bio.Level_1.111.12.0/TCGA-87-5896.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-87-5896.clin.txt /xchip/gdac_data/normalized/diced/gbm/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_GBM.bio.Level_1.111.13.0/TCGA-87-5896.clin.txt /xchip/gdac_data/normalized/diced/gbm/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_GBM.HumanMethylation450.Level_3.7.3.0/TCGA-87-5896-01A-01D-1697-05.data.txt TP /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_2.111.2002.0/TCGA-87-5896-01A-01D-1694-01.birdseed.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-87-5896-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-87-5896-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-87-5896-01A-01D-1694-01.seg.txt /xchip/gdac_data/normalized/diced/gbm/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_GBM.Genome_Wide_SNP_6.Level_3.111.2002.0/TCGA-87-5896-01A-01D-1694-01.seg.txt TCGA-87-5896-01 /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-87-5896-01.wig.txt /xchip/gdac_data/normalized/diced/gbm/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_GBM.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-87-5896-01.maf.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_2.111.1007.0/TCGA-87-5896-01A-01R-1698-01.data.txt /xchip/gdac_data/normalized/diced/gbm/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_GBM.HT_HG-U133A.Level_3.111.1007.0/TCGA-87-5896-01A-01R-1698-01.data.txt HNSC-BA-4074-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.54.23.0/TCGA-BA-4074.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.54.23.0/TCGA-BA-4074.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-4224-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-4224-01.maf.txt HNSC-BB-4225-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.54.23.0/TCGA-BB-4225.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.54.23.0/TCGA-BB-4225.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.54.26.0/TCGA-BB-4225.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-4228-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-4228-01.maf.txt HNSC-BB-7861-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7861.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7861.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-BB-7861.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-7864-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-7864-01.maf.txt HNSC-BB-7866-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7866.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7866.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-BB-7866.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-BB-7866-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-BB-7866-01A-11D-2228-01.seg.txt TCGA-BB-7866-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-7866-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-7866-01.maf.txt HNSC-BB-7870-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7870.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7870.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-BB-7870.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-BB-7870.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.9.2.0/TCGA-BB-7870-01A-11D-2230-05.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-BB-7870-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-BB-7870-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-BB-7870-01A-11R-2232-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.215.2005.0/TCGA-BB-7870-01A-11D-2228-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-7870-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-7870-01.maf.txt HNSC-BB-7871-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7871.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7871.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-BB-7871.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7872.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-BB-7872.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-BB-7872.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-BB-7872.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.9.2.0/TCGA-BB-7872-01A-11D-2230-05.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-BB-7872-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-BB-7872-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-BB-7872-01A-11R-2232-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.215.2005.0/TCGA-BB-7872-01A-11D-2228-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-7872-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-BB-7872-01.maf.txt HNSC-BB-8596-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-BB-8596.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-BB-8596.clin.txt TP TCGA-BB-8596 HNSC-BB-8601-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-BB-8601.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CN-6997-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CN-6997-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CN-6997-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CN-6997-01A-11R-2016-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.164.2002.0/TCGA-CN-6997-01A-11D-2010-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CN-6997-01A-11D-2010-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CN-6997-01A-11D-2010-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CN-6997-01A-11D-2010-01.seg.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CN-6998-01A-23D-2010-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CN-6998-01A-23D-2010-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CN-6998-01A-23D-2010-01.seg.txt TCGA-CN-6998-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CN-6998-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CN-6998-01.maf.txt HNSC-CN-A497-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CN-A497.clin.txt TP TCGA-CN-A497 HNSC-CN-A498-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CN-A498.clin.txt TP TCGA-CN-A498 HNSC-CN-A499-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CN-A499.clin.txt TP TCGA-CN-A499 HNSC-CN-A49A-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CN-A49A.clin.txt TP TCGA-CN-A49A HNSC-CN-A49B-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CN-A49B.clin.txt TP TCGA-CN-A49B HNSC-CN-A49C-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CN-A49C.clin.txt TP TCGA-CN-A49C HNSC-CQ-5323-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.107.18.0/TCGA-CQ-5323.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.107.18.0/TCGA-CQ-5323.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.107.21.0/TCGA-CQ-5323.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CQ-5323-01A-01R-1686-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CQ-5323-01A-01R-1686-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CQ-5323-01A-01R-1686-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CQ-5323-01A-01R-1686-07.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.145.2002.0/TCGA-CR-6474-01A-11D-1869-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-CR-6474-01A-11D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-CR-6474-01A-11D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-CR-6474-01A-11D-1869-01.seg.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.145.2002.0/TCGA-CR-6478-01A-11D-1869-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-CR-6478-01A-11D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-CR-6478-01A-11D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-CR-6478-01A-11D-1869-01.seg.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-CV-7422-01A-21D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-CV-7422-01A-21D-2077-01.seg.txt TCGA-CV-7422-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7422-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7422-01.maf.txt HNSC-CV-7423-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-CV-7423.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-CV-7423.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-CV-7423.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-CV-7423.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.7.2.0/TCGA-CV-7423-01A-11D-2079-05.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7423-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7423-01.maf.txt HNSC-CV-7424-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-CV-7424.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-CV-7424.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-CV-7424.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-CV-7424-01A-11D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-CV-7424-01A-11D-2077-01.seg.txt TCGA-CV-7424-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7424-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7424-01.maf.txt HNSC-CV-7425-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-CV-7425.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-CV-7425.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-CV-7425.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-CV-7425.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.7.2.0/TCGA-CV-7425-01A-11D-2079-05.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-CV-7425-01A-11D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-CV-7425-01A-11D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-CV-7425-01A-11D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-CV-7425-01A-11D-2077-01.seg.txt TCGA-CV-7425 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-CV-7438-01A-21D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-CV-7438-01A-21D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-CV-7438-01A-21D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-CV-7438-01A-21D-2128-01.seg.txt TCGA-CV-7438-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7438-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7438-01.maf.txt HNSC-CV-7440-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.190.16.0/TCGA-CV-7440.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.190.16.0/TCGA-CV-7440.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.190.19.0/TCGA-CV-7440.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.190.19.0/TCGA-CV-7440.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.8.2.0/TCGA-CV-7440-01A-11D-2130-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CV-7440-01A-11R-2131-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CV-7440-01A-11R-2131-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_HNSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CV-7440-01A-13-2074-20.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-CV-7440-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-CV-7440-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-CV-7440-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CV-7440-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CV-7440-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CV-7440-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CV-7440-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CV-7440-01A-11R-2132-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.190.2002.0/TCGA-CV-7440-01A-11D-2128-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-CV-7440-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-CV-7440-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-CV-7440-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-CV-7440-01A-11D-2128-01.seg.txt TCGA-CV-7440-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7440-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CV-7440-01.maf.txt HNSC-CV-7446-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.190.16.0/TCGA-CV-7446.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.190.16.0/TCGA-CV-7446.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.190.19.0/TCGA-CV-7446.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.190.19.0/TCGA-CV-7446.clin.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CV-7446-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CV-7446-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_HNSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CV-7446-01A-13-2074-20.data.txt TP TCGA-CV-7446 HNSC-CV-7568-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.190.16.0/TCGA-CV-7568.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.190.16.0/TCGA-CV-7568.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.190.19.0/TCGA-CV-7568.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.190.19.0/TCGA-CV-7568.clin.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CV-7568-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CV-7568-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_HNSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CV-7568-01A-13-2074-20.data.txt TP TCGA-CV-7568 HNSC-CV-A45O-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CV-A45O.clin.txt TP TCGA-CV-A45O HNSC-CV-A45P-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CV-A45P.clin.txt TP TCGA-CV-A45P HNSC-CV-A45Q-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CV-A45Q.clin.txt TP TCGA-CV-A45Q HNSC-CV-A45R-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CV-A45R.clin.txt TP TCGA-CV-A45R HNSC-CV-A45T-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CV-A45T.clin.txt TP TCGA-CV-A45T HNSC-CV-A45U-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-CV-A45U.clin.txt TP TCGA-CV-A45U HNSC-CX-7082-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.164.21.0/TCGA-CX-7082.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.164.21.0/TCGA-CX-7082.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.164.24.0/TCGA-CX-7082.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.164.24.0/TCGA-CX-7082.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.6.2.0/TCGA-CX-7082-01A-11D-2014-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CX-7082-01A-11R-2015-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CX-7082-01A-11R-2015-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-CX-7082-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-CX-7082-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-CX-7082-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CX-7082-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CX-7082-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CX-7082-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CX-7082-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-CX-7082-01A-11R-2016-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.164.2002.0/TCGA-CX-7082-01A-11D-2010-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CX-7082-01A-11D-2010-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CX-7082-01A-11D-2010-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CX-7082-01A-11D-2010-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.164.2002.0/TCGA-CX-7082-01A-11D-2010-01.seg.txt TCGA-CX-7082-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CX-7082-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-CX-7082-01.maf.txt HNSC-CX-7085-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.164.21.0/TCGA-CX-7085.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.164.21.0/TCGA-CX-7085.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.164.24.0/TCGA-CX-7085.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.164.24.0/TCGA-CX-7085.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.6.2.0/TCGA-CX-7085-01A-21D-2014-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CX-7085-01A-21R-2015-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-CX-7085-01A-21R-2015-13.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.151.2002.0/TCGA-D6-6825-01A-21D-1910-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.151.2002.0/TCGA-D6-6825-01A-21D-1910-01.seg.txt TCGA-D6-6825-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-D6-6825-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-D6-6825-01.maf.txt HNSC-D6-6826-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.151.12.0/TCGA-D6-6826.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.151.12.0/TCGA-D6-6826.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.151.15.0/TCGA-D6-6826.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.151.15.0/TCGA-D6-6826.clin.txt /xchip/gdac_data/normalized/diced/hnsc/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_HNSC.IlluminaHiSeq_DNASeqC.Level_3.1.1.0/TCGA-D6-6826-01A-11D-1911-02.seg.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.151.2002.0/TCGA-D6-6826-01A-11D-1910-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.151.2002.0/TCGA-D6-6826-01A-11D-1910-01.seg.txt TCGA-D6-6826-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-D6-6826-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-D6-6826-01.maf.txt HNSC-D6-6827-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.151.12.0/TCGA-D6-6827.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.151.12.0/TCGA-D6-6827.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.151.15.0/TCGA-D6-6827.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.151.15.0/TCGA-D6-6827.clin.txt /xchip/gdac_data/normalized/diced/hnsc/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_HNSC.IlluminaHiSeq_DNASeqC.Level_3.1.1.0/TCGA-D6-6827-01A-11D-1911-02.seg.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.151.2002.0/TCGA-D6-6827-01A-11D-1910-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.151.2002.0/TCGA-D6-6827-01A-11D-1910-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.151.2002.0/TCGA-D6-6827-01A-11D-1910-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.151.2002.0/TCGA-D6-6827-01A-11D-1910-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.151.2002.0/TCGA-D6-6827-01A-11D-1910-01.seg.txt TCGA-D6-6827 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-D6-6827-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-D6-6827-01.maf.txt HNSC-D6-8568-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-D6-8568.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-D6-8568.clin.txt TP TCGA-D6-8568 HNSC-D6-8569-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-D6-8569.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-D6-8569.clin.txt TP TCGA-D6-8569 HNSC-DQ-5624-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.145.21.0/TCGA-DQ-5624.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.145.21.0/TCGA-DQ-5624.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.145.24.0/TCGA-DQ-5624.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.145.24.0/TCGA-DQ-5624.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-DQ-5624-01A-01R-1873-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-DQ-5624-01A-01R-1873-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-DQ-5624-01A-01R-1873-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-5624-01A-01R-1873-07.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.145.2002.0/TCGA-DQ-5624-01A-01D-1869-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-DQ-5624-01A-01D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-DQ-5624-01A-01D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-DQ-5624-01A-01D-1869-01.seg.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-5625-01A-01R-1873-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.145.2002.0/TCGA-DQ-5625-01A-01D-1869-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-DQ-5625-01A-01D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-DQ-5625-01A-01D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-DQ-5625-01A-01D-1869-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.145.2003.0/TCGA-DQ-5625-01A-01D-1869-01.seg.txt TCGA-DQ-5625-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-DQ-5625-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-DQ-5625-01.maf.txt HNSC-DQ-5629-TP 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/xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-DQ-7592-01A-11D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-DQ-7592-01A-11D-2077-01.seg.txt TCGA-DQ-7592-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-DQ-7592-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-DQ-7592-01.maf.txt HNSC-DQ-7593-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-DQ-7593.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-DQ-7593.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-DQ-7593.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-DQ-7593.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.9.2.0/TCGA-DQ-7593-01A-11D-2230-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-DQ-7593-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-DQ-7593-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7593-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7593-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7593-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7593-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7593-01A-11R-2232-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.215.2005.0/TCGA-DQ-7593-01A-11D-2228-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7593-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7593-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7593-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7593-01A-11D-2228-01.seg.txt TCGA-DQ-7593-01 HNSC-DQ-7594-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-DQ-7594.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-DQ-7594.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-DQ-7594.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-DQ-7594.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.9.2.0/TCGA-DQ-7594-01A-11D-2230-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-DQ-7594-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-DQ-7594-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7594-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7594-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7594-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7594-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7594-01A-11R-2232-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.215.2005.0/TCGA-DQ-7594-01A-11D-2228-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7594-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7594-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7594-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7594-01A-11D-2228-01.seg.txt TCGA-DQ-7594-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-DQ-7594-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-DQ-7594-01.maf.txt HNSC-DQ-7595-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-DQ-7595.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-DQ-7595.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-DQ-7595.clin.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7595-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7595-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7595-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7595-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7595-01A-11R-2232-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.215.2005.0/TCGA-DQ-7595-01A-11D-2228-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7595-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7595-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7595-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7595-01A-11D-2228-01.seg.txt TCGA-DQ-7595-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-DQ-7595-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-DQ-7595-01.maf.txt HNSC-DQ-7596-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-DQ-7596.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-DQ-7596.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.9.2.0/TCGA-DQ-7596-01A-11D-2230-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-DQ-7596-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-DQ-7596-01A-11R-2231-13.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-DQ-7596-01A-11R-2232-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.215.2005.0/TCGA-DQ-7596-01A-11D-2228-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7596-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7596-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7596-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-DQ-7596-01A-11D-2228-01.seg.txt TCGA-DQ-7596-01 HNSC-F7-7848-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.190.16.0/TCGA-F7-7848.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.190.16.0/TCGA-F7-7848.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.190.19.0/TCGA-F7-7848.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.190.19.0/TCGA-F7-7848.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.8.2.0/TCGA-F7-7848-01A-11D-2130-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-F7-7848-01A-11R-2131-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-F7-7848-01A-11R-2131-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-F7-7848-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-F7-7848-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-F7-7848-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-F7-7848-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-F7-7848-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-F7-7848-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-F7-7848-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-F7-7848-01A-11R-2132-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.190.2002.0/TCGA-F7-7848-01A-11D-2128-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-F7-7848-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-F7-7848-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-F7-7848-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-F7-7848-01A-11D-2128-01.seg.txt TCGA-F7-7848-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-F7-7848-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-F7-7848-01.maf.txt HNSC-F7-8298-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-F7-8298.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-F7-8298.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-F7-8298.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-F7-8298.clin.txt TP TCGA-F7-8298 HNSC-F7-8489-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-F7-8489.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-F7-8489.clin.txt TP TCGA-F7-8489 HNSC-H7-7774-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-H7-7774.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-H7-7774.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-H7-7774.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-H7-7774.clin.txt /xchip/gdac_data/normalized/diced/hnsc/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_HNSC.IlluminaHiSeq_DNASeqC.Level_3.1.1.0/TCGA-H7-7774-01A-21D-2317-26.seg.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.7.2.0/TCGA-H7-7774-01A-21D-2079-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-H7-7774-01A-21R-2080-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-H7-7774-01A-21R-2080-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-H7-7774-01A-21R-2081-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-H7-7774-01A-21R-2081-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-H7-7774-01A-21R-2081-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-H7-7774-01A-21R-2081-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-H7-7774-01A-21R-2081-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-H7-7774-01A-21R-2081-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-H7-7774-01A-21R-2081-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-H7-7774-01A-21R-2081-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.188.2002.0/TCGA-H7-7774-01A-21D-2077-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-H7-7774-01A-21D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-H7-7774-01A-21D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-H7-7774-01A-21D-2077-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.188.2002.0/TCGA-H7-7774-01A-21D-2077-01.seg.txt TCGA-H7-7774-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-H7-7774-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-H7-7774-01.maf.txt HNSC-H7-8501-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-H7-8501.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-H7-8501.clin.txt TP TCGA-H7-8501 HNSC-H7-8502-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-H7-8502.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-H7-8502.clin.txt TP TCGA-H7-8502 HNSC-HD-7229-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.164.21.0/TCGA-HD-7229.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.164.21.0/TCGA-HD-7229.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.164.24.0/TCGA-HD-7229.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.164.24.0/TCGA-HD-7229.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.6.2.0/TCGA-HD-7229-01A-11D-2014-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-HD-7229-01A-11R-2015-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-HD-7229-01A-11R-2015-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-HD-7229-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-HD-7229-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-HD-7229-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7229-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7229-01A-11R-2016-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7229-01A-11R-2016-07.data.txt 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/xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-HD-7832-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-HD-7832-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_HNSC.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-HD-7832-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7832-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7832-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7832-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7832-01A-11R-2132-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7832-01A-11R-2132-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.190.2002.0/TCGA-HD-7832-01A-11D-2128-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-HD-7832-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-HD-7832-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-HD-7832-01A-11D-2128-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.190.2002.0/TCGA-HD-7832-01A-11D-2128-01.seg.txt TCGA-HD-7832-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-HD-7832-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-HD-7832-01.maf.txt HNSC-HD-7917-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-HD-7917.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-HD-7917.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-HD-7917.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-HD-7917.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.9.2.0/TCGA-HD-7917-01A-11D-2230-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-HD-7917-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-HD-7917-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7917-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7917-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7917-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7917-01A-11R-2232-07.data.txt /xchip/gdac_data/normalized/diced/hnsc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_HNSC.IlluminaHiSeq_RNASeqV2.Level_3.1.4.0/TCGA-HD-7917-01A-11R-2232-07.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.215.2005.0/TCGA-HD-7917-01A-11D-2228-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-HD-7917-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-HD-7917-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-HD-7917-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-HD-7917-01A-11D-2228-01.seg.txt TCGA-HD-7917-01 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-HD-7917-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-HD-7917-01.maf.txt HNSC-HD-8224-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-HD-8224.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-HD-8224.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-HD-8224.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-HD-8224.clin.txt TP TCGA-HD-8224 HNSC-HD-8314-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-HD-8314.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-HD-8314.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-HD-8314.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-HD-8314.clin.txt TP TCGA-HD-8314 HNSC-HD-8634-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-HD-8634.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-HD-8634.clin.txt TP TCGA-HD-8634 HNSC-HD-8635-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.241.0.0/TCGA-HD-8635.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.241.3.0/TCGA-HD-8635.clin.txt TP TCGA-HD-8635 HNSC-HD-A4C1-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.260.0.0/TCGA-HD-A4C1.clin.txt TP TCGA-HD-A4C1 HNSC-HL-7533-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-HL-7533.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.215.6.0/TCGA-HL-7533.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-HL-7533.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.215.9.0/TCGA-HL-7533.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.9.2.0/TCGA-HL-7533-01A-11D-2230-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-HL-7533-01A-11R-2231-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-HL-7533-01A-11R-2231-13.data.txt TP /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_2.215.2005.0/TCGA-HL-7533-01A-11D-2228-01.birdseed.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-HL-7533-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-HL-7533-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-HL-7533-01A-11D-2228-01.seg.txt /xchip/gdac_data/normalized/diced/hnsc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_HNSC.Genome_Wide_SNP_6.Level_3.215.2005.0/TCGA-HL-7533-01A-11D-2228-01.seg.txt TCGA-HL-7533 /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-HL-7533-01.wig.txt /xchip/gdac_data/normalized/diced/hnsc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_HNSC.IlluminaGA_DNASeq.Level_2.2.0.0/TCGA-HL-7533-01.maf.txt HNSC-IQ-7630-TP /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-IQ-7630.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_HNSC.bio.Level_1.188.15.0/TCGA-IQ-7630.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-IQ-7630.clin.txt /xchip/gdac_data/normalized/diced/hnsc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_HNSC.bio.Level_1.188.18.0/TCGA-IQ-7630.clin.txt /xchip/gdac_data/normalized/diced/hnsc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_HNSC.HumanMethylation450.Level_3.7.2.0/TCGA-IQ-7630-01A-11D-2079-05.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-IQ-7630-01A-11R-2080-13.data.txt /xchip/gdac_data/normalized/diced/hnsc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_HNSC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-IQ-7630-01A-11R-2080-13.data.txt 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/xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3335-01A-01D-0858-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3335-01A-01D-0858-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3335-01A-01D-0858-01.seg.txt TCGA-A3-3335 /xchip/gdac_data/normalized/diced/kirc/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_KIRC.AgilentG4502A_07_3.Level_2.1.0.0/TCGA-A3-3335-01A-01R-0864-07.data.txt /xchip/gdac_data/normalized/diced/kirc/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_KIRC.AgilentG4502A_07_3.Level_3.1.0.0/TCGA-A3-3335-01A-01R-0864-07.data.txt KIRC-A3-3336-TP /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.32.25.0/TCGA-A3-3336.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.32.25.0/TCGA-A3-3336.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.32.26.0/TCGA-A3-3336.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.32.26.0/TCGA-A3-3336.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation27.Level_3.1.4.0/TCGA-A3-3336-01A-01D-0859-05.data.txt /xchip/gdac_data/normalized/diced/kirc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_KIRC.MDA_RPPA_Core.Level_3.1.1.0/TCGA-A3-3336-01A-02-1737-20.data.txt TP /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_2.32.2002.0/TCGA-A3-3336-01A-01D-0858-01.birdseed.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3336-01A-01D-0858-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3336-01A-01D-0858-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3336-01A-01D-0858-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3336-01A-01D-0858-01.seg.txt TCGA-A3-3336 /xchip/gdac_data/normalized/diced/kirc/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_KIRC.AgilentG4502A_07_3.Level_2.1.0.0/TCGA-A3-3336-01A-01R-0864-07.data.txt 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/xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3343-01A-01D-0858-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-A3-3343-01A-01D-0858-01.seg.txt TCGA-A3-3343 /xchip/gdac_data/normalized/diced/kirc/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_KIRC.AgilentG4502A_07_3.Level_2.1.0.0/TCGA-A3-3343-01A-01R-0864-07.data.txt /xchip/gdac_data/normalized/diced/kirc/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_KIRC.AgilentG4502A_07_3.Level_3.1.0.0/TCGA-A3-3343-01A-01R-0864-07.data.txt KIRC-A3-3346-TP /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.32.25.0/TCGA-A3-3346.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.32.25.0/TCGA-A3-3346.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.32.26.0/TCGA-A3-3346.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.32.26.0/TCGA-A3-3346.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation27.Level_3.1.4.0/TCGA-A3-3346-01A-01D-0859-05.data.txt 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/xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_2.68.2002.0/TCGA-A3-3357-01A-02D-1417-01.birdseed.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.68.2003.0/TCGA-A3-3357-01A-02D-1417-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.68.2003.0/TCGA-A3-3357-01A-02D-1417-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.68.2003.0/TCGA-A3-3357-01A-02D-1417-01.seg.txt 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/xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3443-01A-02D-1322-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3443-01A-02D-1322-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3443-01A-02D-1322-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3443-01A-02D-1322-01.seg.txt TCGA-AK-3443 /xchip/gdac_data/normalized/diced/kirc/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_KIRC.AgilentG4502A_07_3.Level_2.1.0.0/TCGA-AK-3443-01A-01R-0864-07.data.txt /xchip/gdac_data/normalized/diced/kirc/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_KIRC.AgilentG4502A_07_3.Level_3.1.0.0/TCGA-AK-3443-01A-01R-0864-07.data.txt KIRC-AK-3444-TP /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.32.25.0/TCGA-AK-3444.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.32.25.0/TCGA-AK-3444.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.32.26.0/TCGA-AK-3444.clin.txt 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/xchip/gdac_data/normalized/diced/kirc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_KIRC.MDA_RPPA_Core.Level_3.1.1.0/TCGA-AK-3444-01A-03-1737-20.data.txt TP /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_2.32.2002.0/TCGA-AK-3444-01A-02D-1322-01.birdseed.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3444-01A-02D-1322-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3444-01A-02D-1322-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3444-01A-02D-1322-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3444-01A-02D-1322-01.seg.txt TCGA-AK-3444 /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3444-01.wig.txt /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-AK-3444-01.maf.txt 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/xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.32.25.0/TCGA-AK-3447.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.32.25.0/TCGA-AK-3447.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.32.26.0/TCGA-AK-3447.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.32.26.0/TCGA-AK-3447.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation27.Level_3.1.4.0/TCGA-AK-3447-01A-01D-0859-05.data.txt /xchip/gdac_data/normalized/diced/kirc/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_KIRC.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AK-3447-01A-01T-0860-13.data.txt /xchip/gdac_data/normalized/diced/kirc/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_KIRC.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-AK-3447-01A-01T-0860-13.data.txt TP /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_2.32.2002.0/TCGA-AK-3447-01A-01D-0858-01.birdseed.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.32.2002.0/TCGA-AK-3447-01A-01D-0858-01.seg.txt 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/xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_2.63.2004.0/TCGA-B0-4699-01A-01D-1274-01.birdseed.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.63.2002.0/TCGA-B0-4699-01A-01D-1274-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.63.2002.0/TCGA-B0-4699-01A-01D-1274-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.63.2002.0/TCGA-B0-4699-01A-01D-1274-01.seg.txt 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/xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.63.29.0/TCGA-B0-4707.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.63.29.0/TCGA-B0-4707.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.63.30.0/TCGA-B0-4707.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.63.30.0/TCGA-B0-4707.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation450.Level_3.1.6.0/TCGA-B0-4707-01A-01D-1275-05.data.txt 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/xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.63.29.0/TCGA-B0-4824.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.63.29.0/TCGA-B0-4824.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.63.30.0/TCGA-B0-4824.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.63.30.0/TCGA-B0-4824.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation450.Level_3.1.6.0/TCGA-B0-4824-01A-01D-1275-05.data.txt 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/xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.68.23.0/TCGA-B0-5121.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.68.23.0/TCGA-B0-5121.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.68.24.0/TCGA-B0-5121.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.68.24.0/TCGA-B0-5121.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation450.Level_3.2.6.0/TCGA-B0-5121-01A-02D-1418-05.data.txt 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/xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.105.20.0/TCGA-B4-5844.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.105.20.0/TCGA-B4-5844.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.105.21.0/TCGA-B4-5844.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.105.21.0/TCGA-B4-5844.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation450.Level_3.6.6.0/TCGA-B4-5844-01A-11D-1670-05.data.txt 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/xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.50.25.0/TCGA-B8-4143.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.50.25.0/TCGA-B8-4143.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.50.26.0/TCGA-B8-4143.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.50.26.0/TCGA-B8-4143.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation27.Level_3.2.4.0/TCGA-B8-4143-01A-01D-1186-05.data.txt 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/xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.63.29.0/TCGA-B8-4622.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.63.29.0/TCGA-B8-4622.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.63.30.0/TCGA-B8-4622.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.63.30.0/TCGA-B8-4622.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation450.Level_3.1.6.0/TCGA-B8-4622-01A-02D-1275-05.data.txt 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/xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5184-01.wig.txt /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-BP-5184-01.maf.txt KIRC-BP-5185-TP /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.70.21.0/TCGA-BP-5185.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.70.21.0/TCGA-BP-5185.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.70.22.0/TCGA-BP-5185.clin.txt 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/xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_KIRC.bio.Level_1.105.20.0/TCGA-EU-5907.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_KIRC.bio.Level_1.105.20.0/TCGA-EU-5907.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_KIRC.bio.Level_1.105.21.0/TCGA-EU-5907.clin.txt /xchip/gdac_data/normalized/diced/kirc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_KIRC.bio.Level_1.105.21.0/TCGA-EU-5907.clin.txt /xchip/gdac_data/normalized/diced/kirc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_KIRC.HumanMethylation450.Level_3.6.6.0/TCGA-EU-5907-01A-11D-1670-05.data.txt /xchip/gdac_data/normalized/diced/kirc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_KIRC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-EU-5907-01A-11R-1671-13.data.txt /xchip/gdac_data/normalized/diced/kirc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_KIRC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-EU-5907-01A-11R-1671-13.data.txt /xchip/gdac_data/normalized/diced/kirc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_KIRC.MDA_RPPA_Core.Level_3.1.1.0/TCGA-EU-5907-01A-13-1742-20.data.txt TP /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_2.105.2002.0/TCGA-EU-5907-01A-11D-1668-01.birdseed.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.105.2002.0/TCGA-EU-5907-01A-11D-1668-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.105.2002.0/TCGA-EU-5907-01A-11D-1668-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.105.2002.0/TCGA-EU-5907-01A-11D-1668-01.seg.txt /xchip/gdac_data/normalized/diced/kirc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_KIRC.Genome_Wide_SNP_6.Level_3.105.2002.0/TCGA-EU-5907-01A-11D-1668-01.seg.txt TCGA-EU-5907 /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-EU-5907-01.wig.txt /xchip/gdac_data/normalized/diced/kirc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_KIRC.IlluminaGA_DNASeq.Level_2.2.7.0/TCGA-EU-5907-01.maf.txt LAML-AB-2802-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2802.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2802.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2802-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2802-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2802-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2802-03A-01T-0734-13.data.txt TB TCGA-AB-2802-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2802-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2802-01.maf.txt LAML-AB-2803-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2803.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2803.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2803-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2803-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2803-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2803-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2803-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2803-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2803-03A-01T-0734-13.data.txt TB TCGA-AB-2803-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2803-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2803-01.maf.txt LAML-AB-2804-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2804.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2804.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2804-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2804-03A-01D-0741-05.data.txt TB TCGA-AB-2804-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2804-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2804-01.maf.txt LAML-AB-2805-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2805.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2805.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2805-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2805-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2805-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2805-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2805-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2805-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2805-03A-01T-0734-13.data.txt TB TCGA-AB-2805-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2805-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2805-01.maf.txt LAML-AB-2806-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2806.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2806.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2806-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2806-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2806-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2806-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2806-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2806-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2806-03A-01T-0734-13.data.txt TB TCGA-AB-2806-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2806-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2806-01.maf.txt LAML-AB-2807-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2807.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2807.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2807-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2807-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2807-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2807-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2807-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2807-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2807-03A-01T-0734-13.data.txt TB TCGA-AB-2807-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2807-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2807-01.maf.txt LAML-AB-2808-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2808.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2808-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2808-01.maf.txt LAML-AB-2809-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2809.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2809.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2809-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2809-03A-01D-0741-05.data.txt TB TCGA-AB-2809-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2809-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2809-01.maf.txt LAML-AB-2810-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2810.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2810.clin.txt 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LAML-AB-2811-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2811.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2811.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2811-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2811-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2811-03B-01T-0760-13.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2811-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2811-01.maf.txt LAML-AB-2812-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2812.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2812.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2812-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2813-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2813-01.maf.txt LAML-AB-2814-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2814.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2814.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2814-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2815-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2815-01.maf.txt LAML-AB-2816-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2816.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2816.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2816-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2816-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2816-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2816-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2816-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2816-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2816-03A-01T-0734-13.data.txt TB TCGA-AB-2816-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2816-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2816-01.maf.txt LAML-AB-2817-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2817.clin.txt 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/xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2817-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2817-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2817-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2817-03A-01T-0736-13.data.txt TB TCGA-AB-2817-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2817-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2817-01.maf.txt LAML-AB-2818-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2818.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2818.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2818-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2818-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2818-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2818-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2818-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2818-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2818-03A-01T-0734-13.data.txt TB TCGA-AB-2818-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2818-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2818-01.maf.txt LAML-AB-2819-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2819.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2819-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2819-01.maf.txt LAML-AB-2820-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2820.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2820.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2820-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2820-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2820-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2820-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2820-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2820-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2820-03A-01T-0735-13.data.txt TB TCGA-AB-2820-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2820-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2820-01.maf.txt LAML-AB-2821-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2821.clin.txt 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/xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2821-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2821-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2821-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2821-03A-01T-0735-13.data.txt TB TCGA-AB-2821-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2821-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2821-01.maf.txt LAML-AB-2822-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2822.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2822.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2822-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2822-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2822-03A-01T-0734-13.data.txt TB TCGA-AB-2822-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2822-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2822-01.maf.txt LAML-AB-2823-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2823.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2823-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2823-01.maf.txt LAML-AB-2824-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2824.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2824.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2824-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2824-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2824-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2824-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2824-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2824-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2824-03A-01T-0736-13.data.txt TB TCGA-AB-2824-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2824-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2824-01.maf.txt LAML-AB-2825-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2825.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2825-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2825-01.maf.txt LAML-AB-2826-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2826.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2826.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2826-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2826-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2826-03A-01T-0734-13.data.txt TB TCGA-AB-2826-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2826-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2826-01.maf.txt LAML-AB-2827-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2827.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2827-01.maf.txt LAML-AB-2828-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2828.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2828.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2828-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2828-03A-01D-0741-05.data.txt 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TCGA-AB-2828-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2828-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2828-01.maf.txt LAML-AB-2829-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2829.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2829.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2829-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2829-03A-01D-0741-05.data.txt TB TCGA-AB-2829-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2829-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2829-01.maf.txt LAML-AB-2830-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2830.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2830.clin.txt 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LAML-AB-2831-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2831.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2831.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2831-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2831-03A-01D-0741-05.data.txt TB TCGA-AB-2831-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2831-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2831-01.maf.txt LAML-AB-2832-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2832.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2832.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2832-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2832-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2832-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2832-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2832-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2832-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2832-03A-01T-0736-13.data.txt TB TCGA-AB-2832-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2832-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2832-01.maf.txt LAML-AB-2833-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2833.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2833.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2833-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2833-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2833-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2833-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2833-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2833-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2833-03A-01T-0734-13.data.txt TB TCGA-AB-2833-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2833-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2833-01.maf.txt LAML-AB-2834-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2834.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2834-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2834-01.maf.txt LAML-AB-2835-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2835.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2835.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2835-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2835-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2835-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2835-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2835-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2835-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2835-03A-01T-0736-13.data.txt TB TCGA-AB-2835-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2835-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2835-01.maf.txt LAML-AB-2836-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2836.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2836-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2836-01.maf.txt LAML-AB-2837-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2837.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2837.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2837-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2838-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2838-01.maf.txt LAML-AB-2839-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2839.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2839.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2839-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2840-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2840-01.maf.txt LAML-AB-2841-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2841.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2841.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2841-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2842-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2842-01.maf.txt LAML-AB-2843-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2843.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2843.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2843-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2844-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2844-01.maf.txt LAML-AB-2845-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2845.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2845.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2845-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2846-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2846-01.maf.txt LAML-AB-2847-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2847.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2847.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2847-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2848-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2848-01.maf.txt LAML-AB-2849-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2849.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2849.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2849-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2851-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2851-01.maf.txt LAML-AB-2853-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2853.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2853.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2853-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2854-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2854-01.maf.txt LAML-AB-2855-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2855.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2855.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2855-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2856-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2856-01.maf.txt LAML-AB-2857-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2857.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2857.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2857-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2858-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2858-01.maf.txt LAML-AB-2859-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2859.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2859.clin.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2859-03A-01T-0736-13.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2859-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2859-01.maf.txt LAML-AB-2860-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2860.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2860.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2860-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2861-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2861-01.maf.txt LAML-AB-2862-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2862.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2862.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2862-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2863-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2863-01.maf.txt LAML-AB-2865-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2865.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2865.clin.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2865-03A-01T-0736-13.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2865-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2865-01.maf.txt LAML-AB-2866-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2866.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2866.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2866-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2867-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2867-01.maf.txt LAML-AB-2868-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2868.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2868.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2868-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2869-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2869-01.maf.txt LAML-AB-2870-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2870.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2870.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2870-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2871-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2871-01.maf.txt LAML-AB-2872-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2872.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2872.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2872-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2873-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2873-01.maf.txt LAML-AB-2874-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2874.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2874.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2874-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2874-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2874-03A-01T-0735-13.data.txt TB TCGA-AB-2874-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2874-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2874-01.maf.txt LAML-AB-2875-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2875.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2875-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2875-01.maf.txt LAML-AB-2876-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2876.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2876.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2876-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2877-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2877-01.maf.txt LAML-AB-2878-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2878.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2878.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2878-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2879-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2879-01.maf.txt LAML-AB-2880-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2880.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2880.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2880-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2881-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2881-01.maf.txt LAML-AB-2882-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2882.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2882.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2882-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2883-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2883-01.maf.txt LAML-AB-2884-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2884.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2884.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2884-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2885-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2885-01.maf.txt LAML-AB-2886-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2886.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2886.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2886-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2887-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2887-01.maf.txt LAML-AB-2888-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2888.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2888.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2888-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2889-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2889-01.maf.txt LAML-AB-2890-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2890.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2890.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2890-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2890-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2890-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2890-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2890-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2890-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2890-03A-01T-0735-13.data.txt TB TCGA-AB-2890-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2890-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2890-01.maf.txt LAML-AB-2891-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2891.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2891-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2891-01.maf.txt LAML-AB-2892-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2892.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2892.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2892-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2892-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2892-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2892-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2892-03A-01T-0734-13.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2893-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2893-01.maf.txt LAML-AB-2894-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2894.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2894.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2894-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2894-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2894-03A-01T-0734-13.data.txt TB TCGA-AB-2894-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2894-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2894-01.maf.txt LAML-AB-2895-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2895.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2895-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2895-01.maf.txt LAML-AB-2896-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2896.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2896.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2896-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2896-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2896-03B-01T-0751-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2896-03B-01T-0751-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2896-03B-01T-0751-13.data.txt TB TCGA-AB-2896-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2896-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2896-01.maf.txt LAML-AB-2897-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2897.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2897.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2897-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2897-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2897-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2897-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2897-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2897-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2897-03A-01T-0735-13.data.txt TB TCGA-AB-2897-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2897-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2897-01.maf.txt LAML-AB-2898-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2898.clin.txt 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/xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2898-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2898-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2898-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2898-03A-01T-0735-13.data.txt TB TCGA-AB-2898-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2898-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2898-01.maf.txt LAML-AB-2899-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2899.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2899.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2899-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2899-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2899-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2899-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2899-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2899-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2899-03A-01T-0736-13.data.txt TB TCGA-AB-2899-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2899-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2899-01.maf.txt LAML-AB-2900-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2900.clin.txt 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/xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2900-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2900-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2900-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2900-03A-01T-0735-13.data.txt TB TCGA-AB-2900-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2900-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2900-01.maf.txt LAML-AB-2901-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2901.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2901.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2901-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2901-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2901-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2901-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2901-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2901-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2901-03A-01T-0735-13.data.txt TB TCGA-AB-2901-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2901-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2901-01.maf.txt LAML-AB-2903-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2903.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2903-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2903-01.maf.txt LAML-AB-2904-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2904.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2904.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2904-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2904-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2904-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2904-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2904-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2904-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2904-03A-01T-0734-13.data.txt TB TCGA-AB-2904-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2904-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2904-01.maf.txt LAML-AB-2906-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2906.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2906-01.maf.txt LAML-AB-2907-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2907.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2907.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2907-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2907-03A-01D-0742-05.data.txt TB TCGA-AB-2907-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2907-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2907-01.maf.txt LAML-AB-2908-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2908.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2908.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2908-03A-01D-0743-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2908-03A-01D-0743-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2908-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2908-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2908-03A-01T-0740-13.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2909-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2909-01.maf.txt LAML-AB-2910-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2910.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2910.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2910-03A-01D-0743-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2911-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2911-01.maf.txt LAML-AB-2912-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2912.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2912.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2912-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2913-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2913-01.maf.txt LAML-AB-2914-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2914.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2914.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2914-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2915-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2915-01.maf.txt LAML-AB-2916-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2916.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2916.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2916-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2917-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2917-01.maf.txt LAML-AB-2918-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2918.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2918.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2918-03A-01D-0743-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2918-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2918-03A-01T-0740-13.data.txt TB TCGA-AB-2918-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2918-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2918-01.maf.txt LAML-AB-2919-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2919.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2919-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2919-01.maf.txt LAML-AB-2920-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2920.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2920.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2920-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2920-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2920-03B-01T-0760-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2920-03B-01T-0760-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2920-03B-01T-0760-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2920-03B-01T-0760-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2920-03B-01T-0760-13.data.txt TB TCGA-AB-2920-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2920-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2920-01.maf.txt LAML-AB-2921-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2921.clin.txt 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/xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2921-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2921-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2921-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2921-03A-01T-0740-13.data.txt TB TCGA-AB-2921-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2921-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2921-01.maf.txt LAML-AB-2922-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2922.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2922.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2922-03A-01D-0743-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2922-03A-01D-0743-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2922-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2922-03A-01T-0740-13.data.txt TB TCGA-AB-2922-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2922-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2922-01.maf.txt LAML-AB-2923-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2923.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2923.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2923-03A-01D-0743-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2923-03A-01D-0743-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2923-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2923-03A-01T-0740-13.data.txt TB TCGA-AB-2923-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2923-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2923-01.maf.txt LAML-AB-2924-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2924.clin.txt 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/xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2924-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2924-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2924-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2924-03A-01T-0740-13.data.txt TB TCGA-AB-2924-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2924-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2924-01.maf.txt LAML-AB-2925-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2925.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2925.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2925-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2925-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2925-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2925-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2925-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2925-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2925-03A-01T-0735-13.data.txt TB TCGA-AB-2925-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2925-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2925-01.maf.txt LAML-AB-2926-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2926.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2926.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2926-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2926-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2926-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2926-03A-01T-0734-13.data.txt TB TCGA-AB-2926-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2926-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2926-01.maf.txt LAML-AB-2927-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2927.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2927.clin.txt 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LAML-AB-2928-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2928.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2928.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2928-03A-01D-0743-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2928-03A-01D-0743-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2928-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2928-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2928-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2928-03A-01T-0740-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2928-03A-01T-0740-13.data.txt TB TCGA-AB-2928-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2928-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2928-01.maf.txt LAML-AB-2929-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2929.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2929.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2929-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2930-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2930-01.maf.txt LAML-AB-2931-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2931.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2931.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2931-03A-01D-0743-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2932-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2932-01.maf.txt LAML-AB-2933-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2933.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2933.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2933-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2934-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2934-01.maf.txt LAML-AB-2935-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2935.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2935.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2935-03A-01D-0743-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2936-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2936-01.maf.txt LAML-AB-2937-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2937.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2937.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2937-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2938-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2938-01.maf.txt LAML-AB-2939-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2939.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2939.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2939-03A-01D-0743-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2940-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2940-01.maf.txt LAML-AB-2941-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2941.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2941.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2941-03A-01D-0743-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2942-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2942-01.maf.txt LAML-AB-2943-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2943.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2943.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2943-03A-01D-0743-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2944-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2944-01.maf.txt LAML-AB-2945-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2945.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2945.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2945-03A-01D-0741-05.data.txt 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TCGA-AB-2946-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2946-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2946-01.maf.txt LAML-AB-2947-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2947.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2947.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2947-03A-01D-0743-05.data.txt 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TCGA-AB-2948-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2948-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2948-01.maf.txt LAML-AB-2949-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2949.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2949.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2949-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2950-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2950-01.maf.txt LAML-AB-2952-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2952.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2952.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2952-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2954-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2954-01.maf.txt LAML-AB-2955-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2955.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2955.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2955-03A-01D-0742-05.data.txt 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TCGA-AB-2959-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2959-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2959-01.maf.txt LAML-AB-2963-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2963.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2963.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2963-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2964-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2964-01.maf.txt LAML-AB-2965-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2965.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2965.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2965-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2966-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2966-01.maf.txt LAML-AB-2967-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2967.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2967.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2967-03A-01D-0742-05.data.txt 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TCGA-AB-2969-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2969-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2969-01.maf.txt LAML-AB-2970-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2970.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2970.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2970-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2971-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2971-01.maf.txt LAML-AB-2972-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2972.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2972.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2972-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2973-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2973-01.maf.txt LAML-AB-2974-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2974.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2974.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2974-03A-01D-0742-05.data.txt 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LAML-AB-2977-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2977.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2977.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2977-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2977-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2977-03A-01T-0734-13.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2977-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2977-01.maf.txt LAML-AB-2978-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2978.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2978.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2978-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2978-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2978-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2978-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2978-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2978-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2978-03A-01T-0734-13.data.txt TB TCGA-AB-2978-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2978-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2978-01.maf.txt LAML-AB-2979-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2979.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2979-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2979-01.maf.txt LAML-AB-2980-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2980.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2980.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2980-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2980-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2980-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2980-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2980-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2980-03A-01T-0734-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2980-03A-01T-0734-13.data.txt TB TCGA-AB-2980-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2980-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2980-01.maf.txt LAML-AB-2981-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2981.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2981-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2981-01.maf.txt LAML-AB-2982-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2982.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2982.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2982-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2982-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2982-03B-01T-0748-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2982-03B-01T-0748-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2982-03B-01T-0748-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2982-03B-01T-0748-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2982-03B-01T-0748-13.data.txt TB TCGA-AB-2982-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2982-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2982-01.maf.txt LAML-AB-2983-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2983.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2983-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2983-01.maf.txt LAML-AB-2984-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2984.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2984.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2984-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2985-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2985-01.maf.txt LAML-AB-2986-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2986.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2986.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2986-03A-01D-0742-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2987-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2987-01.maf.txt LAML-AB-2988-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2988.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2988.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2988-03A-01D-0742-05.data.txt 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LAML-AB-2991-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2991.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2991.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2991-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2991-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2991-03A-01T-0735-13.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2991-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2991-01.maf.txt LAML-AB-2992-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2992.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2992.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2992-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2993-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2993-01.maf.txt LAML-AB-2994-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2994.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2994.clin.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2994-03A-01T-0735-13.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2994-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2994-01.maf.txt LAML-AB-2995-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2995.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2995.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2995-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2996-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2996-01.maf.txt LAML-AB-2997-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2997.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2997.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2997-03A-01D-0742-05.data.txt 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TCGA-AB-2998-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2998-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2998-01.maf.txt LAML-AB-2999-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2999.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-2999.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-2999-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-2999-03A-01D-0742-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2999-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-2999-03A-01T-0735-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2999-03B-01T-0748-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2999-03B-01T-0748-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-2999-03B-01T-0748-13.data.txt TB TCGA-AB-2999-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2999-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-2999-01.maf.txt LAML-AB-3000-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3000.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3000-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3000-01.maf.txt LAML-AB-3001-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3001.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3001.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-3001-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation450.Level_3.2.3.0/TCGA-AB-3001-03A-01D-0741-05.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-3001-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-3001-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3001-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3001-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3001-03A-01T-0736-13.data.txt TB TCGA-AB-3001-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3001-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3001-01.maf.txt LAML-AB-3002-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3002.clin.txt 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/xchip/gdac_data/normalized/diced/laml/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LAML.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-AB-3002-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3002-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3002-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3002-03A-01T-0736-13.data.txt TB TCGA-AB-3002-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3002-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3002-01.maf.txt LAML-AB-3005-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3005.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3005.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-3005-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3005-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3005-03A-01T-0736-13.data.txt TB TCGA-AB-3005-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3005-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3005-01.maf.txt LAML-AB-3006-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3006.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3006-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3006-01.maf.txt LAML-AB-3007-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3007.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3007.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-3007-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3007-03A-01T-0736-13.data.txt /xchip/gdac_data/normalized/diced/laml/rnaseq__illuminaga_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_LAML.IlluminaGA_RNASeq.Level_3.1.5.0/TCGA-AB-3007-03A-01T-0736-13.data.txt TB TCGA-AB-3007-03 /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3007-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3007-01.maf.txt LAML-AB-3008-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3008.clin.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3008-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3008-01.maf.txt LAML-AB-3009-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3009.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3009.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-3009-03A-01D-0741-05.data.txt 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/xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3011-01.wig.txt /xchip/gdac_data/normalized/diced/laml/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_LAML.IlluminaGA_DNASeq.Level_2.2.1.0/TCGA-AB-3011-01.maf.txt LAML-AB-3012-TB /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3012.clin.txt /xchip/gdac_data/normalized/diced/laml/clin__bio__genome_wustl_edu__Level_1__clinical__clin/genome.wustl.edu_LAML.bio.Level_1.25.10.0/TCGA-AB-3012.clin.txt /xchip/gdac_data/normalized/diced/laml/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LAML.HumanMethylation27.Level_3.1.5.0/TCGA-AB-3012-03A-01D-0741-05.data.txt 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LUAD-17-Z002-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z002.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z002-01A-01D-0752-05.data.txt TP TCGA-17-Z002-01 LUAD-17-Z003-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z003.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z003-01A-01D-0752-05.data.txt TP TCGA-17-Z003-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z003-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z003-01.maf.txt LUAD-17-Z004-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z004.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z004-01A-01D-0752-05.data.txt TP TCGA-17-Z004-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z004-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z004-01.maf.txt LUAD-17-Z005-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z005.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z005-01A-01D-0752-05.data.txt TP TCGA-17-Z005-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z005-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z005-01.maf.txt LUAD-17-Z006-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z006.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z006-01A-01D-0752-05.data.txt TP TCGA-17-Z006-01 LUAD-17-Z007-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z007.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z007-01A-01D-0752-05.data.txt TP TCGA-17-Z007-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z007-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z007-01.maf.txt LUAD-17-Z008-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z008.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z008-01A-01D-0752-05.data.txt TP TCGA-17-Z008-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z008-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z008-01.maf.txt LUAD-17-Z009-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z009.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z009-01A-01D-0752-05.data.txt TP TCGA-17-Z009-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z009-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z009-01.maf.txt LUAD-17-Z010-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z010.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z010-01A-01D-0752-05.data.txt TP TCGA-17-Z010-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z010-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z010-01.maf.txt LUAD-17-Z011-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z011.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z011-01A-01D-0752-05.data.txt TP TCGA-17-Z011-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z011-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z011-01.maf.txt LUAD-17-Z012-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z012.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z012-01A-01D-0752-05.data.txt TP TCGA-17-Z012-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z012-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z012-01.maf.txt LUAD-17-Z013-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z013.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z013-01A-01D-0752-05.data.txt TP TCGA-17-Z013-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z013-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z013-01.maf.txt LUAD-17-Z014-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z014.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z014-01A-01D-0752-05.data.txt TP TCGA-17-Z014-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z014-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z014-01.maf.txt LUAD-17-Z015-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z015.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z015-01A-01D-0752-05.data.txt TP TCGA-17-Z015-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z015-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z015-01.maf.txt LUAD-17-Z016-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z016.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z016-01A-01D-0752-05.data.txt TP TCGA-17-Z016-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z016-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z016-01.maf.txt LUAD-17-Z017-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z017.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z017-01A-01D-0752-05.data.txt TP TCGA-17-Z017-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z017-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z017-01.maf.txt LUAD-17-Z018-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z018.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z018-01A-01D-0752-05.data.txt TP TCGA-17-Z018-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z018-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z018-01.maf.txt LUAD-17-Z019-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z019.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z019-01A-01D-0752-05.data.txt TP TCGA-17-Z019-01 LUAD-17-Z020-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z020.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z020-01A-01D-0752-05.data.txt TP TCGA-17-Z020-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z020-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z020-01.maf.txt LUAD-17-Z021-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z021.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z021-01A-01D-0752-05.data.txt TP TCGA-17-Z021-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z021-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z021-01.maf.txt LUAD-17-Z022-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z022.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z022-01A-01D-0752-05.data.txt TP TCGA-17-Z022-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z022-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z022-01.maf.txt LUAD-17-Z023-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z023.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z023-01A-01D-0752-05.data.txt TP TCGA-17-Z023-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z023-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z023-01.maf.txt LUAD-17-Z024-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z024.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z024-01A-01D-0752-05.data.txt TP TCGA-17-Z024-01 LUAD-17-Z025-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z025.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z025-01A-01D-0752-05.data.txt TP TCGA-17-Z025-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z025-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z025-01.maf.txt LUAD-17-Z026-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z026.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z026-01A-01D-0752-05.data.txt TP TCGA-17-Z026-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z026-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z026-01.maf.txt LUAD-17-Z027-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z027.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z027-01A-01D-0752-05.data.txt TP TCGA-17-Z027-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z027-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z027-01.maf.txt LUAD-17-Z028-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z028.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z028-01A-01D-0752-05.data.txt TP TCGA-17-Z028-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z028-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z028-01.maf.txt LUAD-17-Z029-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z029.clin.txt 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/xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z030-01.maf.txt LUAD-17-Z031-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z031.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z031-01A-01D-0752-05.data.txt TP TCGA-17-Z031-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z031-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z031-01.maf.txt LUAD-17-Z032-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z032.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z032-01A-01D-0752-05.data.txt TP TCGA-17-Z032-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z032-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z032-01.maf.txt LUAD-17-Z033-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z033.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z033-01A-01D-0752-05.data.txt TP TCGA-17-Z033-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z033-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z033-01.maf.txt LUAD-17-Z034-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z034.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z034-01A-01D-0752-05.data.txt TP TCGA-17-Z034-01 LUAD-17-Z035-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z035.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z035-01A-01D-0752-05.data.txt TP TCGA-17-Z035-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z035-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z035-01.maf.txt LUAD-17-Z036-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z036.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z036-01A-01D-0752-05.data.txt TP TCGA-17-Z036-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z036-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z036-01.maf.txt LUAD-17-Z037-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z037.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z037-01A-01D-0752-05.data.txt TP TCGA-17-Z037-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z037-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z037-01.maf.txt LUAD-17-Z038-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z038.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z038-01A-01D-0752-05.data.txt TP TCGA-17-Z038-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z038-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z038-01.maf.txt LUAD-17-Z039-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z039.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z039-01A-01D-0752-05.data.txt TP TCGA-17-Z039-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z039-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z039-01.maf.txt LUAD-17-Z040-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z040.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z040-01A-01D-0752-05.data.txt TP TCGA-17-Z040-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z040-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z040-01.maf.txt LUAD-17-Z041-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z041.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z041-01A-01D-0752-05.data.txt TP TCGA-17-Z041-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z041-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z041-01.maf.txt LUAD-17-Z042-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z042.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z042-01A-01D-0752-05.data.txt TP TCGA-17-Z042-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z042-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z042-01.maf.txt LUAD-17-Z043-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z043.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z043-01A-01D-0752-05.data.txt TP TCGA-17-Z043-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z043-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z043-01.maf.txt LUAD-17-Z044-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z044.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z044-01A-01D-0752-05.data.txt TP TCGA-17-Z044-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z044-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z044-01.maf.txt LUAD-17-Z045-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z045.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z045-01A-01D-0752-05.data.txt TP TCGA-17-Z045-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z045-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z045-01.maf.txt LUAD-17-Z046-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z046.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z046-01A-01D-0752-05.data.txt TP TCGA-17-Z046-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z046-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z046-01.maf.txt LUAD-17-Z047-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z047.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z047-01A-01D-0752-05.data.txt TP TCGA-17-Z047-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z047-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z047-01.maf.txt LUAD-17-Z048-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z048.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z048-01A-01D-0752-05.data.txt TP TCGA-17-Z048-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z048-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z048-01.maf.txt LUAD-17-Z049-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z049.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z049-01A-01D-0752-05.data.txt TP TCGA-17-Z049-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z049-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z049-01.maf.txt LUAD-17-Z050-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z050.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z050-01A-01D-0752-05.data.txt TP TCGA-17-Z050-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z050-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z050-01.maf.txt LUAD-17-Z051-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z051.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z051-01A-01D-0752-05.data.txt TP TCGA-17-Z051-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z051-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z051-01.maf.txt LUAD-17-Z052-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z052.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z052-01A-01D-0752-05.data.txt TP TCGA-17-Z052-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z052-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z052-01.maf.txt LUAD-17-Z053-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z053.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z053-01A-01D-0752-05.data.txt TP TCGA-17-Z053-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z053-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z053-01.maf.txt LUAD-17-Z054-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z054.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z054-01A-01D-0752-05.data.txt TP TCGA-17-Z054-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z054-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z054-01.maf.txt LUAD-17-Z055-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z055.clin.txt TP TCGA-17-Z055-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z055-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z055-01.maf.txt LUAD-17-Z056-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z056.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z056-01A-01D-0752-05.data.txt TP TCGA-17-Z056-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z056-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z056-01.maf.txt LUAD-17-Z057-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z057.clin.txt TP TCGA-17-Z057-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z057-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z057-01.maf.txt LUAD-17-Z058-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z058.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z058-01A-01D-0752-05.data.txt TP TCGA-17-Z058-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z058-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z058-01.maf.txt LUAD-17-Z059-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z059.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z059-01A-01D-0752-05.data.txt TP TCGA-17-Z059-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z059-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z059-01.maf.txt LUAD-17-Z060-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z060.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z060-01A-01D-0752-05.data.txt TP TCGA-17-Z060-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z060-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z060-01.maf.txt LUAD-17-Z061-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z061.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z061-01A-01D-0752-05.data.txt TP TCGA-17-Z061-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z061-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z061-01.maf.txt LUAD-17-Z062-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__genome_wustl_edu__Level_1__biospecimen__clin/genome.wustl.edu_LUAD.bio.Level_1.34.6.0/TCGA-17-Z062.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.1.2.0/TCGA-17-Z062-01A-01D-0752-05.data.txt TP TCGA-17-Z062-01 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z062-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-17-Z062-01.maf.txt LUAD-35-3615-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.37.17.0/TCGA-35-3615.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.37.17.0/TCGA-35-3615.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.37.18.0/TCGA-35-3615.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.37.18.0/TCGA-35-3615.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation27.Level_3.2.2.0/TCGA-35-3615-01A-01D-0945-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-35-3615-01A-01T-0947-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaGA_miRNASeq.Level_3.1.3.0/TCGA-35-3615-01A-01T-0947-13.data.txt /xchip/gdac_data/normalized/diced/luad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-35-3615-01A-21-2190-20.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_LUAD.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-35-3615-01A-01R-0946-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_LUAD.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-35-3615-01A-01R-0946-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_LUAD.IlluminaHiSeq_RNASeq.Level_3.1.2.0/TCGA-35-3615-01A-01R-0946-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-35-3615-01A-01R-0946-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-35-3615-01A-01R-0946-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-35-3615-01A-01R-0946-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-35-3615-01A-01R-0946-07.data.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.160.2002.0/TCGA-50-6673-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.160.2002.0/TCGA-50-6673-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.160.2002.0/TCGA-50-6673-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.160.2002.0/TCGA-50-6673-01A-11D-1943-01.seg.txt TCGA-50-6673 LUAD-50-7109-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.166.9.0/TCGA-50-7109.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.166.9.0/TCGA-50-7109.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.166.10.0/TCGA-50-7109.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.166.10.0/TCGA-50-7109.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.6.3.0/TCGA-50-7109-01A-11D-2037-05.data.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.166.2002.0/TCGA-50-7109-01A-11D-2035-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.166.2002.0/TCGA-50-7109-01A-11D-2035-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.166.2002.0/TCGA-50-7109-01A-11D-2035-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.166.2002.0/TCGA-50-7109-01A-11D-2035-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.166.2002.0/TCGA-50-7109-01A-11D-2035-01.seg.txt TCGA-50-7109 LUAD-50-8457-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-50-8457.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-50-8457-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-50-8457-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-50-8457-01A-11H-2325-13.data.txt TP TCGA-50-8457-01 LUAD-50-8459-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-50-8459.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-50-8459-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-50-8459-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-50-8459-01A-11H-2325-13.data.txt TP TCGA-50-8459-01 LUAD-50-8460-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-50-8460.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-50-8460-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-50-8460-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-50-8460-01A-11H-2325-13.data.txt TP TCGA-50-8460-01 LUAD-53-7624-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.183.8.0/TCGA-53-7624.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.183.8.0/TCGA-53-7624.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.183.9.0/TCGA-53-7624.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.183.9.0/TCGA-53-7624.clin.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.183.2002.0/TCGA-53-7624-01A-11D-2062-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.183.2002.0/TCGA-53-7624-01A-11D-2062-01.seg.txt TCGA-53-7624 LUAD-53-7626-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.183.8.0/TCGA-53-7626.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.183.8.0/TCGA-53-7626.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.183.9.0/TCGA-53-7626.clin.txt 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/xchip/gdac_data/normalized/diced/luad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-53-7626-01A-23-2192-20.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-53-7626-01A-12R-2066-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-53-7626-01A-12R-2066-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-53-7626-01A-12R-2066-07.data.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.204.2004.0/TCGA-55-7994-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-55-7994-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-55-7994-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-55-7994-01A-11D-2183-01.seg.txt 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/xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-55-8094.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-55-8094.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-55-8094-01A-11D-2239-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8094-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8094-01A-11H-2240-13.data.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.213.2004.0/TCGA-55-8096-01A-11D-2237-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8096-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8096-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8096-01A-11D-2237-01.seg.txt 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/xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-55-8203.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-55-8203.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-55-8203-01A-11D-2239-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8203-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8203-01A-11H-2240-13.data.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8203-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8203-01A-11D-2237-01.seg.txt TCGA-55-8203 LUAD-55-8204-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-55-8204.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-55-8204.clin.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.213.2004.0/TCGA-55-8204-01A-11D-2237-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8204-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8204-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8204-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8204-01A-11D-2237-01.seg.txt TCGA-55-8204 LUAD-55-8205-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-55-8205.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-55-8205.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-55-8205-01A-11D-2239-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8205-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8205-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8205-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8205-01A-11R-2241-07.data.txt 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/xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-55-8206.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-55-8206.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-55-8206-01A-11D-2239-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8206-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8206-01A-11H-2240-13.data.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8206-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8206-01A-11D-2237-01.seg.txt TCGA-55-8206 LUAD-55-8207-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-55-8207.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-55-8207.clin.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.213.2004.0/TCGA-55-8207-01A-11D-2237-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8207-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8207-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8207-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8207-01A-11D-2237-01.seg.txt TCGA-55-8207 LUAD-55-8208-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-55-8208.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-55-8208.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-55-8208-01A-11D-2239-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8208-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8208-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8208-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8208-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8208-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8208-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8208-01A-11R-2241-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.213.2004.0/TCGA-55-8208-01A-11D-2237-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8208-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8208-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8208-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-55-8208-01A-11D-2237-01.seg.txt TCGA-55-8208 LUAD-55-8299-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-55-8299.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-55-8299.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-55-8299-01A-11D-2285-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8299-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8299-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8299-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8299-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8299-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8299-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8299-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-55-8299-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-55-8299-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-55-8299-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-55-8299-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-55-8299-01A-11D-2283-01.seg.txt TCGA-55-8299 LUAD-55-8301-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-55-8301.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-55-8301.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-55-8301-01A-11D-2285-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8301-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8301-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8301-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8301-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8301-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8301-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-55-8301-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-55-8301-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-55-8301-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-55-8301-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-55-8301-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-55-8301-01A-11D-2283-01.seg.txt TCGA-55-8301 LUAD-55-8302-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-55-8302.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-55-8302-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8302-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-55-8302-01A-11H-2325-13.data.txt TP TCGA-55-8302-01 LUAD-55-A48X-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-55-A48X.clin.txt TP TCGA-55-A48X LUAD-55-A48Y-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-55-A48Y.clin.txt TP TCGA-55-A48Y LUAD-55-A48Z-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-55-A48Z.clin.txt TP TCGA-55-A48Z LUAD-55-A490-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-55-A490.clin.txt TP TCGA-55-A490 LUAD-55-A491-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-55-A491.clin.txt TP TCGA-55-A491 LUAD-55-A492-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-55-A492.clin.txt TP TCGA-55-A492 LUAD-55-A493-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-55-A493.clin.txt TP TCGA-55-A493 LUAD-55-A494-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-55-A494.clin.txt TP TCGA-55-A494 LUAD-55-A4DF-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-55-A4DF.clin.txt TP TCGA-55-A4DF LUAD-55-A4DG-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-55-A4DG.clin.txt TP TCGA-55-A4DG LUAD-62-8394-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-62-8394.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-62-8394-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8394-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8394-01A-11H-2325-13.data.txt TP TCGA-62-8394-01 LUAD-62-8395-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-62-8395.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-62-8395-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8395-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8395-01A-11H-2325-13.data.txt TP TCGA-62-8395-01 LUAD-62-8397-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-62-8397.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-62-8397-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8397-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8397-01A-11H-2325-13.data.txt TP TCGA-62-8397-01 LUAD-62-8398-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-62-8398.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-62-8398-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8398-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8398-01A-11H-2325-13.data.txt TP TCGA-62-8398-01 LUAD-62-8399-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-62-8399.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-62-8399-01A-21D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8399-01A-21H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8399-01A-21H-2325-13.data.txt TP TCGA-62-8399-01 LUAD-62-8402-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-62-8402.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-62-8402-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8402-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-62-8402-01A-11H-2325-13.data.txt TP TCGA-62-8402-01 LUAD-62-A46O-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A46O.clin.txt TP TCGA-62-A46O LUAD-62-A46P-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A46P.clin.txt TP TCGA-62-A46P LUAD-62-A46R-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A46R.clin.txt TP TCGA-62-A46R LUAD-62-A46S-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A46S.clin.txt TP TCGA-62-A46S LUAD-62-A46U-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A46U.clin.txt TP TCGA-62-A46U LUAD-62-A46V-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A46V.clin.txt TP TCGA-62-A46V LUAD-62-A46Y-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A46Y.clin.txt TP TCGA-62-A46Y LUAD-62-A470-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A470.clin.txt TP TCGA-62-A470 LUAD-62-A471-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A471.clin.txt TP TCGA-62-A471 LUAD-62-A472-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-62-A472.clin.txt TP TCGA-62-A472 LUAD-64-1676-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.37.17.0/TCGA-64-1676.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.37.17.0/TCGA-64-1676.clin.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.37.2002.0/TCGA-64-1676-01A-01D-0944-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.37.2002.0/TCGA-64-1676-01A-01D-0944-01.seg.txt TCGA-64-1676 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-64-1676-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-64-1676-01.maf.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.204.2004.0/TCGA-69-7974-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-69-7974-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-69-7974-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-69-7974-01A-11D-2183-01.seg.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-69-7980-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-69-7980-01A-11D-2183-01.seg.txt TCGA-69-7980 LUAD-69-8253-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-69-8253.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-69-8253.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-69-8253.clin.txt 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/xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8253-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8253-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8253-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8253-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-69-8253-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8253-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8253-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8253-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8253-01A-11D-2283-01.seg.txt TCGA-69-8253 LUAD-69-8254-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-69-8254.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-69-8254.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-69-8254.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-69-8254-01A-11D-2285-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-69-8254-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-69-8254-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8254-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8254-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8254-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8254-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8254-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-69-8254-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8254-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8254-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8254-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8254-01A-11D-2283-01.seg.txt TCGA-69-8254 LUAD-69-8255-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-69-8255.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-69-8255.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-69-8255.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-69-8255-01A-11D-2285-05.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8255-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8255-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8255-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8255-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-69-8255-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-69-8255-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8255-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8255-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8255-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-69-8255-01A-11D-2283-01.seg.txt TCGA-69-8255 LUAD-69-8453-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-69-8453.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-69-8453-01A-12D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-69-8453-01A-12H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-69-8453-01A-12H-2325-13.data.txt TP TCGA-69-8453-01 LUAD-71-6725-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.144.12.0/TCGA-71-6725.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.144.12.0/TCGA-71-6725.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.144.13.0/TCGA-71-6725.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.144.13.0/TCGA-71-6725.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.4.3.0/TCGA-71-6725-01A-11D-1856-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-71-6725-01A-11H-1857-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-71-6725-01A-11H-1857-13.data.txt /xchip/gdac_data/normalized/diced/luad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-71-6725-01A-13-2191-20.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-71-6725-01A-11R-1858-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-71-6725-01A-11R-1858-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-71-6725-01A-11R-1858-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-71-6725-01A-11R-1858-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-71-6725-01A-11R-1858-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.144.2002.0/TCGA-71-6725-01A-11D-1854-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.144.2002.0/TCGA-71-6725-01A-11D-1854-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.144.2002.0/TCGA-71-6725-01A-11D-1854-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.144.2002.0/TCGA-71-6725-01A-11D-1854-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.144.2002.0/TCGA-71-6725-01A-11D-1854-01.seg.txt TCGA-71-6725 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-71-6725-01.wig.txt /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-71-6725-01.maf.txt LUAD-73-4658-TP 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/xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8279-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8279-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-86-8279-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8279-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8279-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8279-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8279-01A-11D-2283-01.seg.txt TCGA-86-8279 LUAD-86-8280-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-86-8280.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-86-8280.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-86-8280.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-86-8280-01A-11D-2285-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-86-8280-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-86-8280-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8280-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8280-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8280-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8280-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8280-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-86-8280-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8280-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8280-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8280-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8280-01A-11D-2283-01.seg.txt TCGA-86-8280 LUAD-86-8281-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-86-8281.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-86-8281.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-86-8281.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-86-8281-01A-11D-2285-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-86-8281-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-86-8281-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8281-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8281-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8281-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8281-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-86-8281-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-86-8281-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8281-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8281-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8281-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-86-8281-01A-11D-2283-01.seg.txt TCGA-86-8281 LUAD-86-8358-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-86-8358.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-86-8358-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-86-8358-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-86-8358-01A-11H-2325-13.data.txt TP TCGA-86-8358-01 LUAD-86-8359-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-86-8359.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-86-8359-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-86-8359-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-86-8359-01A-11H-2325-13.data.txt TP TCGA-86-8359-01 LUAD-86-A456-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-86-A456.clin.txt TP TCGA-86-A456 LUAD-86-A4D0-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-86-A4D0.clin.txt TP TCGA-86-A4D0 LUAD-86-A4JF-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-86-A4JF.clin.txt TP TCGA-86-A4JF LUAD-86-A4P7-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-86-A4P7.clin.txt TP TCGA-86-A4P7 LUAD-86-A4P8-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-86-A4P8.clin.txt TP TCGA-86-A4P8 LUAD-91-6828-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.144.12.0/TCGA-91-6828.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.144.12.0/TCGA-91-6828.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.144.13.0/TCGA-91-6828.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.144.13.0/TCGA-91-6828.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.4.3.0/TCGA-91-6828-01A-11D-1856-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-91-6828-01A-11H-1857-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-91-6828-01A-11H-1857-13.data.txt /xchip/gdac_data/normalized/diced/luad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-91-6828-01A-13-2191-20.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-91-6828-01A-11R-1858-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-91-6828-01A-11R-1858-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-91-6828-01A-11R-1858-07.data.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.144.2002.0/TCGA-91-6828-01A-11D-1854-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.144.2002.0/TCGA-91-6828-01A-11D-1854-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.144.2002.0/TCGA-91-6828-01A-11D-1854-01.seg.txt TCGA-91-6828 /xchip/gdac_data/normalized/diced/luad/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUAD.IlluminaGA_DNASeq.Level_2.2.8.0/TCGA-91-6828-01.wig.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.204.2004.0/TCGA-95-7947-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-95-7947-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-95-7947-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-95-7947-01A-11D-2183-01.seg.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.204.2004.0/TCGA-95-7948-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-95-7948-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-95-7948-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-95-7948-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-95-7948-01A-11D-2183-01.seg.txt TCGA-95-7948 LUAD-95-8039-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-95-8039.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-95-8039.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-95-8039-01A-11D-2239-05.data.txt 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/xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.232.0.0/TCGA-95-8494.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.9.3.0/TCGA-95-8494-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-95-8494-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-95-8494-01A-11H-2325-13.data.txt TP TCGA-95-8494-01 LUAD-97-7546-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.166.9.0/TCGA-97-7546.clin.txt 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/xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.166.9.0/TCGA-97-7547.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.166.9.0/TCGA-97-7547.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.166.10.0/TCGA-97-7547.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.166.10.0/TCGA-97-7547.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.6.3.0/TCGA-97-7547-01A-11D-2037-05.data.txt 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/xchip/gdac_data/normalized/diced/luad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-97-7938-01A-13-2192-20.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-7938-01A-11R-2170-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-7938-01A-11R-2170-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-7938-01A-11R-2170-07.data.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.196.2002.0/TCGA-97-7938-01A-11D-2166-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.196.2002.0/TCGA-97-7938-01A-11D-2166-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.196.2002.0/TCGA-97-7938-01A-11D-2166-01.seg.txt TCGA-97-7938 LUAD-97-7941-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.204.4.0/TCGA-97-7941.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.204.4.0/TCGA-97-7941.clin.txt 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/xchip/gdac_data/normalized/diced/luad/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUAD.MDA_RPPA_Core.Level_3.1.0.0/TCGA-97-7941-01A-13-2192-20.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-7941-01A-11R-2187-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-7941-01A-11R-2187-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-7941-01A-11R-2187-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-7941-01A-11R-2187-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-7941-01A-11R-2187-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.204.2004.0/TCGA-97-7941-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-97-7941-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-97-7941-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-97-7941-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.204.2004.0/TCGA-97-7941-01A-11D-2183-01.seg.txt TCGA-97-7941 LUAD-97-8171-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-97-8171.clin.txt 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/xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8171-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8171-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8171-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8171-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8171-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-97-8171-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8171-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8171-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8171-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8171-01A-11D-2283-01.seg.txt TCGA-97-8171 LUAD-97-8172-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-97-8172.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8172.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8172.clin.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-97-8172-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8172-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8172-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8172-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8172-01A-11D-2283-01.seg.txt TCGA-97-8172 LUAD-97-8174-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-97-8174.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8174.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8174.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-97-8174-01A-11D-2285-05.data.txt 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/xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8174-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8174-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8174-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-97-8174-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8174-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8174-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8174-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8174-01A-11D-2283-01.seg.txt TCGA-97-8174 LUAD-97-8175-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-97-8175.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8175.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-97-8175-01A-11D-2285-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-97-8175-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-97-8175-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8175-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8175-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8175-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8175-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8175-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-97-8175-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8175-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8175-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8175-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8175-01A-11D-2283-01.seg.txt TCGA-97-8175 LUAD-97-8177-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-97-8177.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8177.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8177.clin.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-97-8177-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8177-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8177-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8177-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8177-01A-11D-2283-01.seg.txt TCGA-97-8177 LUAD-97-8179-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.222.1.0/TCGA-97-8179.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8179.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.222.2.0/TCGA-97-8179.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.12.3.0/TCGA-97-8179-01A-11D-2285-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-97-8179-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-97-8179-01A-11H-2286-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8179-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8179-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8179-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8179-01A-11R-2287-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-97-8179-01A-11R-2287-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.222.2004.0/TCGA-97-8179-01A-11D-2283-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8179-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8179-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8179-01A-11D-2283-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.222.2004.0/TCGA-97-8179-01A-11D-2283-01.seg.txt TCGA-97-8179 LUAD-97-A4LX-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-97-A4LX.clin.txt TP TCGA-97-A4LX LUAD-97-A4M0-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-97-A4M0.clin.txt TP TCGA-97-A4M0 LUAD-97-A4M1-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-97-A4M1.clin.txt TP TCGA-97-A4M1 LUAD-97-A4M2-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-97-A4M2.clin.txt TP TCGA-97-A4M2 LUAD-97-A4M3-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-97-A4M3.clin.txt TP TCGA-97-A4M3 LUAD-97-A4M5-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-97-A4M5.clin.txt TP TCGA-97-A4M5 LUAD-97-A4M6-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-97-A4M6.clin.txt TP TCGA-97-A4M6 LUAD-97-A4M7-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-97-A4M7.clin.txt TP TCGA-97-A4M7 LUAD-99-7458-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.166.9.0/TCGA-99-7458.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUAD.bio.Level_1.166.9.0/TCGA-99-7458.clin.txt 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/xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.213.2004.0/TCGA-99-8028-01A-11D-2237-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-99-8028-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-99-8028-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-99-8028-01A-11D-2237-01.seg.txt 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/xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-99-8033.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-99-8033.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-99-8033.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-99-8033-01A-11D-2239-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-99-8033-01A-11H-2240-13.data.txt 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/xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-99-8033-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-99-8033-01A-11R-2241-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.213.2004.0/TCGA-99-8033-01A-11D-2237-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-99-8033-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-99-8033-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-99-8033-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-99-8033-01A-11D-2237-01.seg.txt TCGA-99-8033 LUAD-J2-8192-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-J2-8192.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-J2-8192.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-J2-8192.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-J2-8192-01A-11D-2239-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-J2-8192-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-J2-8192-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8192-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8192-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8192-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8192-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8192-01A-11R-2241-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.213.2004.0/TCGA-J2-8192-01A-11D-2237-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-J2-8192-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-J2-8192-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-J2-8192-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-J2-8192-01A-11D-2237-01.seg.txt TCGA-J2-8192 LUAD-J2-8194-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUAD.bio.Level_1.213.1.0/TCGA-J2-8194.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-J2-8194.clin.txt /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUAD.bio.Level_1.213.2.0/TCGA-J2-8194.clin.txt /xchip/gdac_data/normalized/diced/luad/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUAD.HumanMethylation450.Level_3.11.3.0/TCGA-J2-8194-01A-11D-2239-05.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-J2-8194-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUAD.IlluminaHiSeq_miRNASeq.Level_3.1.4.0/TCGA-J2-8194-01A-11H-2240-13.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8194-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8194-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8194-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8194-01A-11R-2241-07.data.txt /xchip/gdac_data/normalized/diced/luad/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUAD.IlluminaHiSeq_RNASeqV2.Level_3.1.6.0/TCGA-J2-8194-01A-11R-2241-07.data.txt TP /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_2.213.2004.0/TCGA-J2-8194-01A-11D-2237-01.birdseed.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-J2-8194-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-J2-8194-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-J2-8194-01A-11D-2237-01.seg.txt /xchip/gdac_data/normalized/diced/luad/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUAD.Genome_Wide_SNP_6.Level_3.213.2004.0/TCGA-J2-8194-01A-11D-2237-01.seg.txt TCGA-J2-8194 LUAD-J2-A4AD-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-J2-A4AD.clin.txt TP TCGA-J2-A4AD LUAD-J2-A4AE-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-J2-A4AE.clin.txt TP TCGA-J2-A4AE LUAD-J2-A4AG-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-J2-A4AG.clin.txt TP TCGA-J2-A4AG LUAD-L4-A4E5-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-L4-A4E5.clin.txt TP TCGA-L4-A4E5 LUAD-L4-A4E6-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-L4-A4E6.clin.txt TP TCGA-L4-A4E6 LUAD-L9-A443-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-L9-A443.clin.txt TP TCGA-L9-A443 LUAD-L9-A444-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.258.0.0/TCGA-L9-A444.clin.txt TP TCGA-L9-A444 LUAD-MN-A4N1-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MN-A4N1.clin.txt TP TCGA-MN-A4N1 LUAD-MN-A4N4-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MN-A4N4.clin.txt TP TCGA-MN-A4N4 LUAD-MN-A4N5-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MN-A4N5.clin.txt TP TCGA-MN-A4N5 LUAD-MP-A4SV-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4SV.clin.txt TP TCGA-MP-A4SV LUAD-MP-A4SW-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4SW.clin.txt TP TCGA-MP-A4SW LUAD-MP-A4SY-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4SY.clin.txt TP TCGA-MP-A4SY LUAD-MP-A4T2-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4T2.clin.txt TP TCGA-MP-A4T2 LUAD-MP-A4T7-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4T7.clin.txt TP TCGA-MP-A4T7 LUAD-MP-A4T8-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4T8.clin.txt TP TCGA-MP-A4T8 LUAD-MP-A4T9-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4T9.clin.txt TP TCGA-MP-A4T9 LUAD-MP-A4TA-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4TA.clin.txt TP TCGA-MP-A4TA LUAD-MP-A4TC-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4TC.clin.txt TP TCGA-MP-A4TC LUAD-MP-A4TI-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4TI.clin.txt TP TCGA-MP-A4TI LUAD-MP-A4TK-TP /xchip/gdac_data/normalized/diced/luad/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUAD.bio.Level_1.264.0.0/TCGA-MP-A4TK.clin.txt TP TCGA-MP-A4TK LUSC-18-3406-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.39.16.0/TCGA-18-3406.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.39.16.0/TCGA-18-3406.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.39.17.0/TCGA-18-3406.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.39.17.0/TCGA-18-3406.clin.txt /xchip/gdac_data/normalized/diced/lusc/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_LUSC.CGH-1x1M_G4447A.Level_3.39.1.0/TCGA-18-3406-01A-01D-1028-04.seg.txt /xchip/gdac_data/normalized/diced/lusc/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_LUSC.HG-CGH-415K_G4124A.Level_3.6.0.0/TCGA-18-3406-01A-01D-1519-02.seg.txt /xchip/gdac_data/normalized/diced/lusc/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_LUSC.HuEx-1_0-st-v2.Level_2.39.0.0/TCGA-18-3406-01A-01R-1030-03.data.txt /xchip/gdac_data/normalized/diced/lusc/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_LUSC.HuEx-1_0-st-v2.Level_3.39.0.0/TCGA-18-3406-01A-01R-1030-03.data.txt /xchip/gdac_data/normalized/diced/lusc/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_LUSC.HuEx-1_0-st-v2.Level_3.39.0.0/TCGA-18-3406-01A-01R-1030-03.data.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation27.Level_3.3.5.0/TCGA-18-3406-01A-01D-0979-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-18-3406-01A-01T-0981-13.data.txt 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/xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-22-0944-01.wig.txt /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-22-0944-01.maf.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_LUSC.AgilentG4502A_07_3.Level_2.23.2.0/TCGA-22-0944-01A-01R-0692-07.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_LUSC.AgilentG4502A_07_3.Level_3.23.2.0/TCGA-22-0944-01A-01R-0692-07.data.txt 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/xchip/gdac_data/normalized/diced/lusc/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_LUSC.HT_HG-U133A.Level_2.23.1005.0/TCGA-22-1000-01A-01R-0690-01.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_LUSC.HT_HG-U133A.Level_3.23.1005.0/TCGA-22-1000-01A-01R-0690-01.data.txt LUSC-22-1002-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.23.24.0/TCGA-22-1002.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.23.24.0/TCGA-22-1002.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.23.25.0/TCGA-22-1002.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.23.2002.0/TCGA-22-1002-01A-01D-0685-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.23.2002.0/TCGA-22-1002-01A-01D-0685-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.23.2002.0/TCGA-22-1002-01A-01D-0685-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_LUSC.Human1MDuo.Level_3.1.0.0/TCGA-22-1002-01A-01D-0687-06.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_LUSC.Human1MDuo.Level_3.1.0.0/TCGA-22-1002-01A-01D-0687-06.seg.txt TCGA-22-1002-01 /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-22-1002-01.wig.txt /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-22-1002-01.maf.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_LUSC.AgilentG4502A_07_3.Level_2.23.2.0/TCGA-22-1002-01A-01R-0692-07.data.txt 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/xchip/gdac_data/normalized/diced/lusc/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_LUSC.AgilentG4502A_07_3.Level_2.23.2.0/TCGA-22-1005-01A-01R-0692-07.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_LUSC.AgilentG4502A_07_3.Level_3.23.2.0/TCGA-22-1005-01A-01R-0692-07.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_LUSC.HT_HG-U133A.Level_2.23.1005.0/TCGA-22-1005-01A-01R-0690-01.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_LUSC.HT_HG-U133A.Level_3.23.1005.0/TCGA-22-1005-01A-01R-0690-01.data.txt LUSC-22-1011-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.23.24.0/TCGA-22-1011.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.77.2002.0/TCGA-33-4589-01A-01D-1439-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.77.2002.0/TCGA-33-4589-01A-01D-1439-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.77.2002.0/TCGA-33-4589-01A-01D-1439-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.77.2002.0/TCGA-33-4589-01A-01D-1439-01.seg.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.159.2002.0/TCGA-33-6738-01A-11D-1943-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-33-6738-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-33-6738-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-33-6738-01A-11D-1943-01.seg.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.140.2002.0/TCGA-34-5929-01A-11D-1816-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.140.2002.0/TCGA-34-5929-01A-11D-1816-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.140.2002.0/TCGA-34-5929-01A-11D-1816-01.seg.txt TCGA-34-5929-01 /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-34-5929-01.wig.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.159.2002.0/TCGA-34-7107-01A-11D-1943-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-34-7107-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-34-7107-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-34-7107-01A-11D-1943-01.seg.txt 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/xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-34-8454-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-34-8454-01A-11H-2325-13.data.txt TP TCGA-34-8454-01 LUSC-34-8455-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-34-8455.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-34-8455.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-34-8455-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-34-8455-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-34-8455-01A-11H-2325-13.data.txt TP TCGA-34-8455-01 LUSC-34-8456-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-34-8456.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-34-8456.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-34-8456-01A-21D-2324-05.data.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.140.2002.0/TCGA-43-6771-01A-11D-1816-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.140.2002.0/TCGA-43-6771-01A-11D-1816-01.seg.txt TCGA-43-6771-01 /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-43-6771-01.wig.txt /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-43-6771-01.maf.txt LUSC-43-6773-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.159.9.0/TCGA-43-6773.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.159.9.0/TCGA-43-6773.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.159.10.0/TCGA-43-6773.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.159.10.0/TCGA-43-6773.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.5.4.0/TCGA-43-6773-01A-41D-1947-05.data.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-43-6773-01A-41D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-43-6773-01A-41D-1943-01.seg.txt TCGA-43-6773-01 LUSC-43-7656-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-43-7656.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-43-7656.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-43-7656.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-43-7656-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-43-7656-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7656-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7656-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7656-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7656-01A-11D-2121-01.seg.txt TCGA-43-7656 LUSC-43-7657-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-43-7657.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-43-7657.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-43-7657.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-43-7657-01A-31D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7657-01A-31D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7657-01A-31D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7657-01A-31D-2121-01.seg.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-43-7658-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7658-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7658-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7658-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-43-7658-01A-11D-2121-01.seg.txt TCGA-43-7658 LUSC-43-8115-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-43-8115.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-43-8115.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-43-8115.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-43-8115.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-43-8115-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-43-8115-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-43-8115-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-43-8115-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-43-8115-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-43-8115-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-43-8115-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-43-8115-01A-11D-2243-01.seg.txt TCGA-43-8115 LUSC-43-8116-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-43-8116.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-43-8116.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-43-8116.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-43-8116.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-43-8116-01A-11D-2245-05.data.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-43-8116-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-43-8116-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-43-8116-01A-11D-2243-01.seg.txt TCGA-43-8116 LUSC-43-8118-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-43-8118.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-43-8118.clin.txt TP TCGA-43-8118 LUSC-43-A474-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-43-A474.clin.txt TP TCGA-43-A474 LUSC-43-A475-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-43-A475.clin.txt TP TCGA-43-A475 LUSC-46-3765-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.39.16.0/TCGA-46-3765.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.39.16.0/TCGA-46-3765.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.39.2003.0/TCGA-46-3765-01A-01D-0978-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.39.2003.0/TCGA-46-3765-01A-01D-0978-01.seg.txt TCGA-46-3765-01 /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-46-3765-01.wig.txt /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-46-3765-01.maf.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.53.2002.0/TCGA-51-4081-01A-01D-1097-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.53.2002.0/TCGA-51-4081-01A-01D-1097-01.seg.txt TCGA-51-4081-01 /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-51-4081-01.wig.txt /xchip/gdac_data/normalized/diced/lusc/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_LUSC.IlluminaGA_DNASeq.Level_2.2.9.0/TCGA-51-4081-01.maf.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-52-7622-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7622-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7622-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7622-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7622-01A-11D-2121-01.seg.txt TCGA-52-7622 LUSC-52-7809-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-52-7809.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-52-7809.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-52-7809.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-52-7809.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7809-01A-21D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7809-01A-21D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7809-01A-21D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7809-01A-21D-2121-01.seg.txt TCGA-52-7809 LUSC-52-7810-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-52-7810.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-52-7810.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-52-7810.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-52-7810-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-52-7810-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-52-7810-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-52-7810-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-52-7810-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7810-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7810-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7810-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-52-7810-01A-11D-2121-01.seg.txt TCGA-52-7810-01 LUSC-52-7811-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-52-7811.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-52-7811.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.23.2002.0/TCGA-56-1622-01A-01D-0685-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.23.2002.0/TCGA-56-1622-01A-01D-0685-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.23.2002.0/TCGA-56-1622-01A-01D-0685-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.23.2002.0/TCGA-56-1622-01A-01D-0685-01.seg.txt 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/xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-56-7221-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7221-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7221-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-56-7221-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-56-7221-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7221-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7221-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7221-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7221-01A-11D-2041-01.seg.txt TCGA-56-7221 LUSC-56-7222-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7222.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7222.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7222.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7222.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-56-7222-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7222-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7222-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-56-7222-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-56-7222-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7222-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7222-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7222-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7222-01A-11D-2041-01.seg.txt TCGA-56-7222 LUSC-56-7223-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7223.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7223.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7223.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7223.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-56-7223-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7223-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7223-01A-11H-2044-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-56-7223-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7223-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7223-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7223-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7223-01A-11D-2041-01.seg.txt TCGA-56-7223 LUSC-56-7579-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7579.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7579.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7579.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7579.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-56-7579-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7579-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7579-01A-11H-2044-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-56-7579-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7579-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7579-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7579-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7579-01A-11D-2041-01.seg.txt TCGA-56-7579 LUSC-56-7580-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7580.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7580.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7580.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7580.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-56-7580-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7580-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7580-01A-11H-2044-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-56-7580-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7580-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7580-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7580-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7580-01A-11D-2041-01.seg.txt TCGA-56-7580 LUSC-56-7582-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7582.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-56-7582.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7582.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-56-7582.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-56-7582-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7582-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7582-01A-11H-2044-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-56-7582-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7582-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7582-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7582-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-56-7582-01A-11D-2041-01.seg.txt TCGA-56-7582 LUSC-56-7730-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-56-7730.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-56-7730.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-56-7730.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-56-7730-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7730-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7730-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-56-7730-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-56-7730-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7730-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7730-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7730-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7730-01A-11D-2121-01.seg.txt TCGA-56-7730-01 LUSC-56-7731-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-56-7731.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-56-7731.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-56-7731-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7731-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7731-01A-11H-2124-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-56-7731-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7731-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7731-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7731-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7731-01A-11D-2121-01.seg.txt TCGA-56-7731-01 LUSC-56-7822-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-56-7822.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-56-7822.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-56-7822.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-56-7822-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7822-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7822-01A-11H-2124-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-56-7822-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7822-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7822-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7822-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-56-7822-01A-11D-2121-01.seg.txt TCGA-56-7822-01 LUSC-56-7823-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-56-7823.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-56-7823.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-56-7823-01B-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7823-01B-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-7823-01B-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-56-7823-01B-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-7823-01B-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-7823-01B-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-7823-01B-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-7823-01B-11D-2243-01.seg.txt TCGA-56-7823-01 LUSC-56-8082-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-56-8082.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-56-8082.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-56-8082-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8082-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8082-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-56-8082-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8082-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8082-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8082-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8082-01A-11D-2243-01.seg.txt TCGA-56-8082-01 LUSC-56-8083-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-56-8083.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-56-8083.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-56-8083-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8083-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8083-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-56-8083-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8083-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8083-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8083-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8083-01A-11D-2243-01.seg.txt TCGA-56-8083-01 LUSC-56-8201-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-56-8201.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-56-8201.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-56-8201-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8201-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8201-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-56-8201-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8201-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8201-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8201-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-56-8201-01A-11D-2243-01.seg.txt TCGA-56-8201-01 LUSC-56-8304-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-56-8304.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-56-8304.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-56-8304-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8304-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8304-01A-11H-2325-13.data.txt TP TCGA-56-8304-01 LUSC-56-8305-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-56-8305.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-56-8305.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-56-8305-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8305-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8305-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-56-8305-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8305-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8305-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8305-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8305-01A-11D-2292-01.seg.txt TCGA-56-8305-01 LUSC-56-8307-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-56-8307.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-56-8307.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-56-8307-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8307-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8307-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-56-8307-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8307-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8307-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8307-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8307-01A-11D-2292-01.seg.txt TCGA-56-8307-01 LUSC-56-8308-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-56-8308.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-56-8308.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-56-8308-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8308-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8308-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-56-8308-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8308-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8308-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8308-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8308-01A-11D-2292-01.seg.txt TCGA-56-8308-01 LUSC-56-8309-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-56-8309.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-56-8309.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-56-8309-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8309-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-56-8309-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-56-8309-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8309-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8309-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8309-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-56-8309-01A-11D-2292-01.seg.txt TCGA-56-8309-01 LUSC-56-8503-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8503.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8503.clin.txt TP TCGA-56-8503 LUSC-56-8504-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8504.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8504.clin.txt TP TCGA-56-8504 LUSC-56-8622-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8622.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8622.clin.txt TP TCGA-56-8622 LUSC-56-8623-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8623.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8623.clin.txt TP TCGA-56-8623 LUSC-56-8624-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8624.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8624.clin.txt TP TCGA-56-8624 LUSC-56-8625-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8625.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8625.clin.txt TP TCGA-56-8625 LUSC-56-8626-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8626.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8626.clin.txt TP TCGA-56-8626 LUSC-56-8628-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8628.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8628.clin.txt TP TCGA-56-8628 LUSC-56-8629-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-56-8629.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-56-8629.clin.txt TP TCGA-56-8629 LUSC-56-A49D-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-56-A49D.clin.txt TP TCGA-56-A49D LUSC-56-A4BW-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-56-A4BW.clin.txt TP TCGA-56-A4BW LUSC-56-A4BX-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-56-A4BX.clin.txt TP TCGA-56-A4BX LUSC-56-A4BY-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-56-A4BY.clin.txt TP TCGA-56-A4BY LUSC-58-8386-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-58-8386.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-58-8386.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-58-8386-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8386-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8386-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-58-8386-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-58-8386-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-58-8386-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-58-8386-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-58-8386-01A-11D-2292-01.seg.txt TCGA-58-8386-01 LUSC-58-8387-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-58-8387.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-58-8387.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-58-8387-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8387-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8387-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-58-8387-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-58-8387-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-58-8387-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-58-8387-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-58-8387-01A-11D-2292-01.seg.txt TCGA-58-8387-01 LUSC-58-8388-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-58-8388.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-58-8388.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-58-8388-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8388-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8388-01A-11H-2325-13.data.txt TP TCGA-58-8388-01 LUSC-58-8390-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-58-8390.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-58-8390.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-58-8390-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8390-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8390-01A-11H-2325-13.data.txt TP TCGA-58-8390-01 LUSC-58-8391-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-58-8391.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-58-8391.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-58-8391-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8391-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8391-01A-11H-2325-13.data.txt TP TCGA-58-8391-01 LUSC-58-8392-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-58-8392.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-58-8392.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-58-8392-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8392-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8392-01A-11H-2325-13.data.txt TP TCGA-58-8392-01 LUSC-58-8393-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-58-8393.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-58-8393.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-58-8393-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8393-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-58-8393-01A-11H-2325-13.data.txt TP TCGA-58-8393-01 LUSC-58-A46J-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-58-A46J.clin.txt TP TCGA-58-A46J LUSC-58-A46K-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-58-A46K.clin.txt TP TCGA-58-A46K LUSC-58-A46L-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-58-A46L.clin.txt TP TCGA-58-A46L LUSC-58-A46M-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-58-A46M.clin.txt TP TCGA-58-A46M LUSC-58-A46N-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-58-A46N.clin.txt TP TCGA-58-A46N LUSC-60-2695-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.31.19.0/TCGA-60-2695.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.31.19.0/TCGA-60-2695.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.31.20.0/TCGA-60-2695.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.31.20.0/TCGA-60-2695.clin.txt /xchip/gdac_data/normalized/diced/lusc/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_LUSC.CGH-1x1M_G4447A.Level_3.31.1.0/TCGA-60-2695-01A-01D-0845-04.seg.txt /xchip/gdac_data/normalized/diced/lusc/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_LUSC.HG-CGH-415K_G4124A.Level_3.2.0.0/TCGA-60-2695-01A-01D-0847-02.seg.txt /xchip/gdac_data/normalized/diced/lusc/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_LUSC.HuEx-1_0-st-v2.Level_2.31.0.0/TCGA-60-2695-01A-01R-0850-03.data.txt /xchip/gdac_data/normalized/diced/lusc/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_LUSC.HuEx-1_0-st-v2.Level_3.31.0.0/TCGA-60-2695-01A-01R-0850-03.data.txt /xchip/gdac_data/normalized/diced/lusc/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_LUSC.HuEx-1_0-st-v2.Level_3.31.0.0/TCGA-60-2695-01A-01R-0850-03.data.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation27.Level_3.2.5.0/TCGA-60-2695-01A-01D-0848-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-60-2695-01A-01T-1557-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaGA_miRNASeq.Level_3.1.2.0/TCGA-60-2695-01A-01T-1557-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-60-2695-01A-21-2193-20.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-60-2695-01A-01R-0851-07.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.31.2002.0/TCGA-60-2695-01A-01D-0844-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.31.2002.0/TCGA-60-2695-01A-01D-0844-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.31.2002.0/TCGA-60-2695-01A-01D-0844-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.31.2002.0/TCGA-60-2695-01A-01D-0844-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.31.2002.0/TCGA-60-2695-01A-01D-0844-01.seg.txt TCGA-60-2695-01 /xchip/gdac_data/normalized/diced/lusc/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_LUSC.AgilentG4502A_07_3.Level_2.23.2.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_LUSC.AgilentG4502A_07_3.Level_3.23.2.0/TCGA-60-2695-01A-01R-0851-07.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_LUSC.HT_HG-U133A.Level_2.31.1005.0/TCGA-60-2695-01A-01R-0849-01.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_LUSC.HT_HG-U133A.Level_3.31.1005.0/TCGA-60-2695-01A-01R-0849-01.data.txt LUSC-60-2696-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.31.19.0/TCGA-60-2696.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.31.19.0/TCGA-60-2696.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-60-2703-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-60-2703-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-60-2703-01A-11D-2041-01.seg.txt TCGA-60-2703 LUSC-60-2704-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-60-2704.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-60-2704.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-60-2704-01A-21-2193-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-60-2704-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-60-2704-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-60-2704-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-60-2704-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-60-2704-01A-11D-2041-01.seg.txt TCGA-60-2704 LUSC-60-2706-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.31.19.0/TCGA-60-2706.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.31.19.0/TCGA-60-2706.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.31.20.0/TCGA-60-2706.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_LUSC.HT_HG-U133A.Level_2.31.1005.0/TCGA-60-2706-01A-01R-0849-01.data.txt /xchip/gdac_data/normalized/diced/lusc/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_LUSC.HT_HG-U133A.Level_3.31.1005.0/TCGA-60-2706-01A-01R-0849-01.data.txt LUSC-60-2707-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.31.19.0/TCGA-60-2707.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.31.19.0/TCGA-60-2707.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.31.20.0/TCGA-60-2707.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-68-7756.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-68-7756.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-68-7756.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-68-7756.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-68-7756-01A-11D-2123-05.data.txt 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/xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-68-7757.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-68-7757.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-68-7757.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-68-7757-01B-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-68-7757-01B-11H-2295-13.data.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-68-7757-01B-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-68-7757-01B-11D-2292-01.seg.txt TCGA-68-7757-01 LUSC-68-8250-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-68-8250.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-68-8250.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-68-8250.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-68-8251.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-68-8251.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-68-8251.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-68-8251-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-68-8251-01A-11H-2295-13.data.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-77-7140-01A-41D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7140-01A-41D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7140-01A-41D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7140-01A-41D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7140-01A-41D-2041-01.seg.txt TCGA-77-7140 LUSC-77-7141-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7141.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7141.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7141.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7141.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-77-7141-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-7141-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-7141-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-77-7141-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-77-7141-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7141-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7141-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7141-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7141-01A-11D-2041-01.seg.txt TCGA-77-7141 LUSC-77-7142-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7142.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7142.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7142.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7142.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-77-7142-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7142-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7142-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7142-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7142-01A-11D-2041-01.seg.txt TCGA-77-7142 LUSC-77-7335-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7335.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7335.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7335.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7335.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-77-7335-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7335-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7335-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7335-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7335-01A-11D-2041-01.seg.txt TCGA-77-7335 LUSC-77-7337-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7337.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7337.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7337.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7337.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-77-7337-01A-21D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7337-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7337-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7337-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7337-01A-21D-2041-01.seg.txt TCGA-77-7337 LUSC-77-7338-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7338.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7338.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7338.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7338.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-77-7338-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-7338-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-7338-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-77-7338-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-77-7338-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7338-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7338-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7338-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7338-01A-11D-2041-01.seg.txt TCGA-77-7338 LUSC-77-7463-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7463.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7463.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7463.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7463.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-77-7463-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-7463-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-7463-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-77-7463-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-77-7463-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7463-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7463-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7463-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7463-01A-11D-2041-01.seg.txt TCGA-77-7463 LUSC-77-7465-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7465.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-77-7465.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7465.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-77-7465.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-77-7465-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-7465-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-7465-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-77-7465-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-77-7465-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7465-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7465-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7465-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-77-7465-01A-11D-2041-01.seg.txt TCGA-77-7465 LUSC-77-8007-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.208.4.0/TCGA-77-8007.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-77-8007.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-77-8007.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.8.4.0/TCGA-77-8007-01A-11D-2185-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8007-01A-11H-2186-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8007-01A-11H-2186-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.208.2002.0/TCGA-77-8007-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8007-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8007-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8007-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8007-01A-11D-2183-01.seg.txt TCGA-77-8007-01 LUSC-77-8008-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.208.4.0/TCGA-77-8008.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-77-8008.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-77-8008.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.8.4.0/TCGA-77-8008-01A-21D-2185-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8008-01A-21H-2186-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8008-01A-21H-2186-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.208.2002.0/TCGA-77-8008-01A-21D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8008-01A-21D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8008-01A-21D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8008-01A-21D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8008-01A-21D-2183-01.seg.txt TCGA-77-8008-01 LUSC-77-8009-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.208.4.0/TCGA-77-8009.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-77-8009.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-77-8009.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.8.4.0/TCGA-77-8009-01A-11D-2185-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8009-01A-11H-2186-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8009-01A-11H-2186-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.208.2002.0/TCGA-77-8009-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8009-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8009-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8009-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-77-8009-01A-11D-2183-01.seg.txt TCGA-77-8009-01 LUSC-77-8128-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8128.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8128.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8128.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8128.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8128-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8128-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8128-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8128-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8128-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8128-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8128-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8128-01A-11D-2243-01.seg.txt TCGA-77-8128 LUSC-77-8130-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8130.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8130.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8130.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8130.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8130-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8130-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8130-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8130-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8130-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8130-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8130-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8130-01A-11D-2243-01.seg.txt TCGA-77-8130 LUSC-77-8131-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8131.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8131.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8131.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8131.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8131-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8131-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8131-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8131-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8131-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8131-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8131-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8131-01A-11D-2243-01.seg.txt TCGA-77-8131 LUSC-77-8133-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8133.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8133.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8133.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8133.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8133-01A-12D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8133-01A-12H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8133-01A-12H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8133-01A-12D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8133-01A-12D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8133-01A-12D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8133-01A-12D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8133-01A-12D-2243-01.seg.txt TCGA-77-8133 LUSC-77-8136-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8136.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8136.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8136.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8136.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8136-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8136-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8136-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8136-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8136-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8136-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8136-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8136-01A-11D-2243-01.seg.txt TCGA-77-8136 LUSC-77-8138-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8138.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8138.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8138.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8138.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8138-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8138-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8138-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8138-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8138-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8138-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8138-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8138-01A-11D-2243-01.seg.txt TCGA-77-8138 LUSC-77-8139-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8139.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8139.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8139-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8139-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8139-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8139-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8139-01A-11D-2243-01.seg.txt TCGA-77-8139 LUSC-77-8140-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8140.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8140.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8140.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8140.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8140-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8140-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8140-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8140-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8140-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8140-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8140-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8140-01A-11D-2243-01.seg.txt TCGA-77-8140 LUSC-77-8143-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8143.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8143.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8143.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8143.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8143-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8143-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8143-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8143-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8143-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8143-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8143-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8143-01A-11D-2243-01.seg.txt TCGA-77-8143 LUSC-77-8144-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8144.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8144.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8144.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8144.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8144-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8144-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8144-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8144-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8144-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8144-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8144-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8144-01A-11D-2243-01.seg.txt TCGA-77-8144 LUSC-77-8145-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8145.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8145.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8145.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8145.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8145-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8145-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8145-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8145-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8145-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8145-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8145-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8145-01A-11D-2243-01.seg.txt TCGA-77-8145 LUSC-77-8146-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8146.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8146.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8146.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8146.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8146-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8146-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8146-01A-11H-2246-13.data.txt TP TCGA-77-8146 LUSC-77-8148-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8148.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8148.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8148.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8148.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8148-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8148-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8148-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8148-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8148-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8148-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8148-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8148-01A-11D-2243-01.seg.txt TCGA-77-8148 LUSC-77-8150-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8150.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8150.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8150.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8150.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8150-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8150-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8150-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8150-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8150-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8150-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8150-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8150-01A-11D-2243-01.seg.txt TCGA-77-8150 LUSC-77-8153-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-77-8153.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-77-8153.clin.txt TP TCGA-77-8153 LUSC-77-8154-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8154.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-77-8154.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8154.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-77-8154.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-77-8154-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8154-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-77-8154-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-77-8154-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8154-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8154-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8154-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-77-8154-01A-11D-2243-01.seg.txt TCGA-77-8154 LUSC-77-8156-TP 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/xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7697-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7697-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7697-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7697-01A-11D-2121-01.seg.txt TCGA-85-7697 LUSC-85-7698-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7698.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7698.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7698.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7698.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-85-7698-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7698-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7698-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-85-7698-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-85-7698-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7698-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7698-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7698-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7698-01A-11D-2121-01.seg.txt TCGA-85-7698 LUSC-85-7699-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7699.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7699.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7699.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7699.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-85-7699-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7699-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7699-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-85-7699-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-85-7699-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7699-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7699-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7699-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7699-01A-11D-2121-01.seg.txt TCGA-85-7699 LUSC-85-7710-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7710.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7710.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7710.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7710.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-85-7710-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7710-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7710-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-85-7710-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-85-7710-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7710-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7710-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7710-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7710-01A-11D-2121-01.seg.txt TCGA-85-7710 LUSC-85-7843-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7843.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7843.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7843.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7843.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-85-7843-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7843-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7843-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-85-7843-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-85-7843-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7843-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7843-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7843-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7843-01A-11D-2121-01.seg.txt TCGA-85-7843 LUSC-85-7844-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7844.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-85-7844.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7844.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-85-7844.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-85-7844-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7844-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7844-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-85-7844-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-85-7844-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7844-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7844-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7844-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-85-7844-01A-11D-2121-01.seg.txt TCGA-85-7844 LUSC-85-7950-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.208.4.0/TCGA-85-7950.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-85-7950.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-85-7950.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.8.4.0/TCGA-85-7950-01A-11D-2185-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7950-01A-11H-2186-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-7950-01A-11H-2186-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-85-7950-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.208.2002.0/TCGA-85-7950-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-85-7950-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-85-7950-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-85-7950-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-85-7950-01A-11D-2183-01.seg.txt TCGA-85-7950-01 LUSC-85-8048-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8048.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8048.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8048.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8048.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-85-8048-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8048-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8048-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-85-8048-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8048-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8048-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8048-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8048-01A-11D-2243-01.seg.txt TCGA-85-8048 LUSC-85-8049-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8049.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8049.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8049.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8049.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-85-8049-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8049-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8049-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-85-8049-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8049-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8049-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8049-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8049-01A-11D-2243-01.seg.txt TCGA-85-8049 LUSC-85-8052-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8052.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8052.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8052.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8052.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-85-8052-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8052-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8052-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-85-8052-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8052-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8052-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8052-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8052-01A-11D-2243-01.seg.txt TCGA-85-8052 LUSC-85-8070-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8070.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8070.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8070.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8070.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-85-8070-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8070-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8070-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-85-8070-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8070-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8070-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8070-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8070-01A-11D-2243-01.seg.txt TCGA-85-8070 LUSC-85-8071-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8071.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8071.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8071.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8071.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-85-8071-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8071-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8071-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-85-8071-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8071-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8071-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8071-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8071-01A-11D-2243-01.seg.txt TCGA-85-8071 LUSC-85-8072-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8072.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-85-8072.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8072.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-85-8072.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-85-8072-01A-31D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8072-01A-31H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8072-01A-31H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-85-8072-01A-31D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8072-01A-31D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8072-01A-31D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8072-01A-31D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-85-8072-01A-31D-2243-01.seg.txt TCGA-85-8072 LUSC-85-8276-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-85-8276.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8276.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8276.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-85-8276-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8276-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8276-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-85-8276-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8276-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8276-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8276-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8276-01A-11D-2292-01.seg.txt TCGA-85-8276-01 LUSC-85-8277-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-85-8277.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8277.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8277.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-85-8277-01A-11D-2294-05.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-85-8277-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8277-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8277-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8277-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8277-01A-11D-2292-01.seg.txt TCGA-85-8277-01 LUSC-85-8287-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-85-8287.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8287.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8287.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-85-8287-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8287-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8287-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-85-8287-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8287-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8287-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8287-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8287-01A-11D-2292-01.seg.txt TCGA-85-8287-01 LUSC-85-8288-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-85-8288.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8288.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8288.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-85-8288-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8288-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8288-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-85-8288-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8288-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8288-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8288-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8288-01A-11D-2292-01.seg.txt TCGA-85-8288-01 LUSC-85-8350-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-85-8350.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8350.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-85-8350-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8350-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8350-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-85-8350-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8350-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8350-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8350-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8350-01A-11D-2292-01.seg.txt TCGA-85-8350-01 LUSC-85-8351-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-85-8351.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8351.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-85-8351-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8351-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8351-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-85-8351-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8351-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8351-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8351-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8351-01A-11D-2292-01.seg.txt TCGA-85-8351-01 LUSC-85-8352-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-85-8352.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-85-8352.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-85-8352-01A-31D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8352-01A-31H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8352-01A-31H-2325-13.data.txt TP TCGA-85-8352-01 LUSC-85-8353-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-85-8353.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8353.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-85-8353-01A-21D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8353-01A-21H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8353-01A-21H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-85-8353-01A-21D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8353-01A-21D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8353-01A-21D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8353-01A-21D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8353-01A-21D-2292-01.seg.txt TCGA-85-8353-01 LUSC-85-8354-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-85-8354.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-85-8354.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-85-8354-01A-31D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8354-01A-31H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8354-01A-31H-2325-13.data.txt TP TCGA-85-8354-01 LUSC-85-8355-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-85-8355.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-85-8355.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-85-8355-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8355-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8355-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-85-8355-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8355-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8355-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8355-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-85-8355-01A-11D-2292-01.seg.txt TCGA-85-8355-01 LUSC-85-8479-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-85-8479.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-85-8479.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-85-8479-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8479-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8479-01A-11H-2325-13.data.txt TP TCGA-85-8479-01 LUSC-85-8481-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-85-8481.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-85-8481.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-85-8481-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8481-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-85-8481-01A-11H-2325-13.data.txt TP TCGA-85-8481-01 LUSC-85-8580-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-85-8580.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-85-8580.clin.txt TP TCGA-85-8580 LUSC-85-8582-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-85-8582.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-85-8582.clin.txt TP TCGA-85-8582 LUSC-85-8584-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-85-8584.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-85-8584.clin.txt TP TCGA-85-8584 LUSC-85-8664-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-85-8664.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-85-8664.clin.txt TP TCGA-85-8664 LUSC-85-8666-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.243.0.0/TCGA-85-8666.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.243.1.0/TCGA-85-8666.clin.txt TP TCGA-85-8666 LUSC-85-A4CN-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-85-A4CN.clin.txt TP TCGA-85-A4CN LUSC-90-6837-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.159.9.0/TCGA-90-6837.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.159.9.0/TCGA-90-6837.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.159.10.0/TCGA-90-6837.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.159.10.0/TCGA-90-6837.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.5.4.0/TCGA-90-6837-01A-11D-1947-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-6837-01A-11H-1948-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-6837-01A-11H-1948-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-90-6837-01A-13-2194-20.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-90-6837-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-90-6837-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-90-6837-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-90-6837-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-90-6837-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-90-6837-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-90-6837-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-90-6837-01A-11R-1949-07.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.159.2002.0/TCGA-90-6837-01A-11D-1943-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-90-6837-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-90-6837-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-90-6837-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-90-6837-01A-11D-1943-01.seg.txt TCGA-90-6837-01 LUSC-90-7766-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-90-7766.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-90-7766.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-90-7766.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-90-7766.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-90-7766-01A-21D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-7766-01A-21H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-7766-01A-21H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-90-7766-01A-23-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-90-7766-01A-21D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7766-01A-21D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7766-01A-21D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7766-01A-21D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7766-01A-21D-2121-01.seg.txt TCGA-90-7766 LUSC-90-7767-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-90-7767.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-90-7767.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-90-7767.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-90-7767.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-90-7767-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-7767-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-7767-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-90-7767-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-90-7767-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7767-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7767-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7767-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7767-01A-11D-2121-01.seg.txt TCGA-90-7767 LUSC-90-7769-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-90-7769.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-90-7769.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-90-7769.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-90-7769.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-90-7769-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-7769-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-7769-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-90-7769-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-90-7769-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7769-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7769-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7769-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-90-7769-01A-11D-2121-01.seg.txt TCGA-90-7769 LUSC-90-7964-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.208.4.0/TCGA-90-7964.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-90-7964.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-90-7964.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.8.4.0/TCGA-90-7964-01A-21D-2185-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-7964-01A-21H-2186-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-90-7964-01A-21H-2186-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.208.2002.0/TCGA-90-7964-01A-21D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-90-7964-01A-21D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-90-7964-01A-21D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-90-7964-01A-21D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-90-7964-01A-21D-2183-01.seg.txt TCGA-90-7964-01 LUSC-92-7340-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-92-7340.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-92-7340.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-92-7340.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-92-7340.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-92-7340-01A-21D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-7340-01A-21H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-7340-01A-21H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-92-7340-01A-23-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-92-7340-01A-21D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-92-7340-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-92-7340-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-92-7340-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-92-7340-01A-21D-2041-01.seg.txt TCGA-92-7340 LUSC-92-7341-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-92-7341.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-92-7341.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-92-7341.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-92-7341.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-92-7341-01A-31D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-7341-01A-31H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-7341-01A-31H-2044-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-92-7341-01A-31D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-92-7341-01A-31D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-92-7341-01A-31D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-92-7341-01A-31D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-92-7341-01A-31D-2041-01.seg.txt TCGA-92-7341 LUSC-92-8063-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-92-8063.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-92-8063.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-92-8063.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-92-8063.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-92-8063-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-8063-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-8063-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-92-8063-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8063-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8063-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8063-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8063-01A-11D-2243-01.seg.txt TCGA-92-8063 LUSC-92-8064-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-92-8064.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-92-8064.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-92-8064.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-92-8064.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-92-8064-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-8064-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-8064-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-92-8064-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8064-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8064-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8064-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8064-01A-11D-2243-01.seg.txt TCGA-92-8064 LUSC-92-8065-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-92-8065.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-92-8065.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-92-8065.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-92-8065.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-92-8065-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-8065-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-92-8065-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-92-8065-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8065-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8065-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8065-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-92-8065-01A-11D-2243-01.seg.txt TCGA-92-8065 LUSC-94-7033-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.159.9.0/TCGA-94-7033.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.159.9.0/TCGA-94-7033.clin.txt 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/xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-94-7033-01A-13-2194-20.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-94-7033-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-94-7033-01A-11R-1949-07.data.txt /xchip/gdac_data/normalized/diced/lusc/rnaseq__illuminahiseq_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_LUSC.IlluminaHiSeq_RNASeq.Level_3.1.3.0/TCGA-94-7033-01A-11R-1949-07.data.txt 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/xchip/gdac_data/normalized/diced/lusc/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_LUSC.IlluminaHiSeq_RNASeqV2.Level_3.1.0.0/TCGA-94-7033-01A-11R-1949-07.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.159.2002.0/TCGA-94-7033-01A-11D-1943-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-94-7033-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-94-7033-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-94-7033-01A-11D-1943-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.159.2002.0/TCGA-94-7033-01A-11D-1943-01.seg.txt TCGA-94-7033-01 LUSC-94-7557-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-94-7557.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.193.7.0/TCGA-94-7557.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-94-7557.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.193.8.0/TCGA-94-7557.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.7.4.0/TCGA-94-7557-01A-11D-2123-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-7557-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-7557-01A-11H-2124-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-94-7557-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.193.2002.0/TCGA-94-7557-01A-11D-2121-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-94-7557-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-94-7557-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-94-7557-01A-11D-2121-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.193.2002.0/TCGA-94-7557-01A-11D-2121-01.seg.txt TCGA-94-7557 LUSC-94-7943-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.208.4.0/TCGA-94-7943.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-94-7943.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.208.5.0/TCGA-94-7943.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.8.4.0/TCGA-94-7943-01A-11D-2185-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-7943-01A-11H-2186-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-7943-01A-11H-2186-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-94-7943-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.208.2002.0/TCGA-94-7943-01A-11D-2183-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-94-7943-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-94-7943-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-94-7943-01A-11D-2183-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.208.2002.0/TCGA-94-7943-01A-11D-2183-01.seg.txt TCGA-94-7943-01 LUSC-94-8035-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-94-8035.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-94-8035.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-94-8035-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-8035-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-8035-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-94-8035-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-94-8035-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-94-8035-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-94-8035-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-94-8035-01A-11D-2243-01.seg.txt TCGA-94-8035-01 LUSC-94-8490-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-94-8490.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-94-8490.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-94-8490-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-8490-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-8490-01A-11H-2325-13.data.txt TP TCGA-94-8490-01 LUSC-94-8491-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.233.0.0/TCGA-94-8491.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.233.1.0/TCGA-94-8491.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.11.4.0/TCGA-94-8491-01A-11D-2324-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-8491-01A-11H-2325-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-94-8491-01A-11H-2325-13.data.txt TP TCGA-94-8491-01 LUSC-96-7544-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-96-7544.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-96-7544.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-96-7544.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-96-7544.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-96-7544-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-96-7544-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-96-7544-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-96-7544-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-96-7544-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-96-7544-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-96-7544-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-96-7544-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-96-7544-01A-11D-2041-01.seg.txt TCGA-96-7544 LUSC-96-7545-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-96-7545.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-96-7545.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-96-7545.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-96-7545.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-96-7545-01A-21D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-96-7545-01A-21H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-96-7545-01A-21H-2044-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-96-7545-01A-21D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-96-7545-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-96-7545-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-96-7545-01A-21D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-96-7545-01A-21D-2041-01.seg.txt TCGA-96-7545 LUSC-96-8169-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-96-8169.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-96-8169.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-96-8169.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-96-8169-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-96-8169-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-96-8169-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-96-8169-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-96-8169-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-96-8169-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-96-8169-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-96-8169-01A-11D-2292-01.seg.txt TCGA-96-8169-01 LUSC-96-8170-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.225.1.0/TCGA-96-8170.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-96-8170.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.225.2.0/TCGA-96-8170.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.10.4.0/TCGA-96-8170-01A-11D-2294-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-96-8170-01A-11H-2295-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-96-8170-01A-11H-2295-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.225.2004.0/TCGA-96-8170-01A-11D-2292-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-96-8170-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-96-8170-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-96-8170-01A-11D-2292-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.225.2004.0/TCGA-96-8170-01A-11D-2292-01.seg.txt TCGA-96-8170-01 LUSC-98-7454-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-98-7454.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.181.6.0/TCGA-98-7454.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-98-7454.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.181.7.0/TCGA-98-7454.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.6.4.0/TCGA-98-7454-01A-11D-2043-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-7454-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-7454-01A-11H-2044-13.data.txt /xchip/gdac_data/normalized/diced/lusc/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_LUSC.MDA_RPPA_Core.Level_3.1.0.0/TCGA-98-7454-01A-13-2195-20.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.181.2002.0/TCGA-98-7454-01A-11D-2041-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-98-7454-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-98-7454-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-98-7454-01A-11D-2041-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.181.2003.0/TCGA-98-7454-01A-11D-2041-01.seg.txt TCGA-98-7454 LUSC-98-8020-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-98-8020.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-98-8020.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-98-8020-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-8020-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-8020-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-98-8020-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8020-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8020-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8020-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8020-01A-11D-2243-01.seg.txt TCGA-98-8020-01 LUSC-98-8021-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-98-8021.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-98-8021.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-98-8021.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-98-8021.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-98-8021-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-8021-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-8021-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-98-8021-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8021-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8021-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8021-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8021-01A-11D-2243-01.seg.txt TCGA-98-8021 LUSC-98-8022-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-98-8022.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-98-8022.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-98-8022.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-98-8022.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-98-8022-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-8022-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-8022-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-98-8022-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8022-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8022-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8022-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8022-01A-11D-2243-01.seg.txt TCGA-98-8022 LUSC-98-8023-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-98-8023.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_LUSC.bio.Level_1.214.2.0/TCGA-98-8023.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-98-8023.clin.txt /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_LUSC.bio.Level_1.214.3.0/TCGA-98-8023.clin.txt /xchip/gdac_data/normalized/diced/lusc/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_LUSC.HumanMethylation450.Level_3.9.4.0/TCGA-98-8023-01A-11D-2245-05.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-8023-01A-11H-2246-13.data.txt /xchip/gdac_data/normalized/diced/lusc/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_LUSC.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-98-8023-01A-11H-2246-13.data.txt TP /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_2.214.2005.0/TCGA-98-8023-01A-11D-2243-01.birdseed.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8023-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8023-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8023-01A-11D-2243-01.seg.txt /xchip/gdac_data/normalized/diced/lusc/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_LUSC.Genome_Wide_SNP_6.Level_3.214.2005.0/TCGA-98-8023-01A-11D-2243-01.seg.txt TCGA-98-8023 LUSC-J1-A4AH-TP /xchip/gdac_data/normalized/diced/lusc/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_LUSC.bio.Level_1.259.0.0/TCGA-J1-A4AH.clin.txt TP TCGA-J1-A4AH OV-01-0628-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-01-0628.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-01-0628.clin.txt TP TCGA-01-0628 OV-01-0630-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-01-0630.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-01-0630.clin.txt TP TCGA-01-0630 OV-01-0631-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-01-0631.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-01-0631.clin.txt TP TCGA-01-0631 OV-01-0633-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-01-0633.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-01-0633.clin.txt TP TCGA-01-0633 OV-01-0636-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-01-0636.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-01-0636.clin.txt TP TCGA-01-0636 OV-01-0637-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-01-0637.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-01-0637.clin.txt TP TCGA-01-0637 OV-01-0639-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-01-0639.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-01-0639.clin.txt TP TCGA-01-0639 OV-01-0642-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-01-0642.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-01-0642.clin.txt TP TCGA-01-0642 OV-04-1331-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1331.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1331.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-04-1331.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-04-1331.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-04-1331-01A-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-04-1331-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-04-1331-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-04-1331-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-04-1331-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1331-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1331-01A-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1331-01A-01R-1569-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1331-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1331-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1331-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1331-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1331-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1331-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1331-01A-01D-0430-06.seg.txt TCGA-04-1331-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-04-1331-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-04-1331-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1331-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1331-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1331-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1331-01A-01R-0434-01.data.txt OV-04-1332-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1332.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1332.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-04-1332.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1332-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1332-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1332-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1332-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1332-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1332-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1332-01A-01D-0430-06.seg.txt TCGA-04-1332-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1332-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1332-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1332-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1332-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1332-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1332-01A-01R-0434-01.data.txt OV-04-1335-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1335.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1335-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1335-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1335-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1335-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1335-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1335-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1335-01A-01D-0430-06.seg.txt TCGA-04-1335-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1335-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1335-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1335-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1335-01A-01R-0434-01.data.txt OV-04-1336-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1336.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1336.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1336-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1336-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1336-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1336-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1336-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1336-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1336-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1336-01A-01D-0430-06.seg.txt TCGA-04-1336-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1336-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1336-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1336-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1336-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1336-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1336-01A-01R-0434-01.data.txt OV-04-1337-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1337.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1337.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-04-1337.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1337-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1337-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1337-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1337-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1337-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1337-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1337-01A-01D-0430-06.seg.txt TCGA-04-1337-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1337-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1337-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1337-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1337-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1337-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1337-01A-01R-0434-01.data.txt OV-04-1338-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1338.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1338-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1338-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1338-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1338-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1338-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1338-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1338-01A-01D-0430-06.seg.txt TCGA-04-1338-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1338-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1338-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1338-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1338-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1338-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1338-01A-01R-0434-01.data.txt OV-04-1341-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1341.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1341-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1341-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1341-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1341-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1341-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1341-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1341-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1341-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1341-01A-01D-0430-06.seg.txt TCGA-04-1341-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1341-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1341-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1341-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1341-01A-01R-0434-01.data.txt OV-04-1342-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1342.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-04-1342-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-04-1342-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-04-1342-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1342-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1342-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1342-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1342-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1342-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1342-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1342-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1342-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1342-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1342-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1342-01A-01D-0430-06.seg.txt TCGA-04-1342-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-04-1342-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-04-1342-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1342-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1342-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1342-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1342-01A-01R-0434-01.data.txt OV-04-1343-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1343.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1343.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-04-1343.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-04-1343-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1343-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1343-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1343-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1343-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1343-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1343-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1343-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1343-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1343-01A-01D-0430-06.seg.txt TCGA-04-1343-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1343-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1343-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1343-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1343-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-04-1343-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-04-1343-01A-01R-0434-01.data.txt OV-04-1346-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1346.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-04-1346.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-04-1346-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1346-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1346-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-04-1346-01A-01D-0428-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1347-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1347-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1347-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1347-01A-01R-0436-07.data.txt 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TCGA-04-1349-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1349-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1349-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1349-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1349-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-04-1349-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-04-1349-01A-01R-0453-01.data.txt OV-04-1350-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-04-1350.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-04-1350.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-04-1350.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-04-1350-01A-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1350-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1350-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1350-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1350-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1350-01A-01D-0458-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-04-1350-01A-01D-0458-06.seg.txt TCGA-04-1350-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1350-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1350-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1350-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1350-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-04-1350-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-04-1350-01A-01R-0453-01.data.txt OV-04-1351-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-04-1351.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1351-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1351-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1351-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1351-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.2.2.0/TCGA-04-1351-01A-01D-0458-06.seg.txt TCGA-04-1351-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1351-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1351-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-04-1351-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-04-1351-01A-01R-0453-01.data.txt OV-04-1353-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1353.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1353.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-04-1353-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-04-1353-01A-01D-1046-02.seg.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-04-1353-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1353-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1353-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1353-01A-01D-1043-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-04-1356-01A-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1356-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1356-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1356-01A-01D-0452-01.seg.txt 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TCGA-04-1361-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1361-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1361-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1361-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1361-01A-01R-0456-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.13.2.0/TCGA-04-1367-01A-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.13.2.0/TCGA-04-1367-01A-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.4.5.0/TCGA-04-1367-01A-01D-0460-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1367-01A-01T-0455-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1367-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1367-01A-01R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-04-1367-01A-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1367-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1367-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1367-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1367-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.2.2.0/TCGA-04-1367-01A-01D-0458-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.2.2.0/TCGA-04-1367-01A-01D-0458-06.seg.txt TCGA-04-1367-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-04-1367-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-04-1367-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1367-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1367-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-04-1367-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-04-1367-01A-01R-0453-01.data.txt OV-04-1369-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1369.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1369.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1369.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1369.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-04-1369-01A-02D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-04-1369-01A-02D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-04-1369-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-04-1369-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-04-1369-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-04-1369-01A-02D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1369-01A-02T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1369-01A-11-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-04-1369-01A-02D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1369-01A-02D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1369-01A-02D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1369-01A-02D-1043-01.seg.txt TCGA-04-1369-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-04-1369-01A-02R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-04-1369-01A-02R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-04-1369-01A-02R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-04-1369-01A-02R-1048-01.data.txt OV-04-1370-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1370.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1370.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1370.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1370.clin.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1370-01A-21-1562-20.data.txt TP TCGA-04-1370 OV-04-1371-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-04-1371.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-04-1371.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-04-1371.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-04-1371.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.13.2.0/TCGA-04-1371-01A-01D-0457-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.13.2.0/TCGA-04-1371-01A-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.13.2.0/TCGA-04-1371-01A-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.13.2.0/TCGA-04-1371-01A-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.4.5.0/TCGA-04-1371-01A-01D-0460-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1371-01A-01T-0455-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-04-1371-01A-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1371-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1371-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1371-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-04-1371-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.2.2.0/TCGA-04-1371-01A-01D-0458-06.seg.txt TCGA-04-1371-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1371-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1371-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-04-1371-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-04-1371-01A-01R-0453-01.data.txt OV-04-1514-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-04-1514.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-04-1514.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-04-1514.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-04-1514.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.15.2.0/TCGA-04-1514-01A-01D-0499-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.6.1.0/TCGA-04-1514-01A-01D-0500-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.15.2.0/TCGA-04-1514-01A-01R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.15.2.0/TCGA-04-1514-01A-01R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.15.2.0/TCGA-04-1514-01A-01R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.6.5.0/TCGA-04-1514-01A-01D-0501-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1514-01A-01T-0505-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1514-01A-21-1558-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1514-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1514-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.15.2002.0/TCGA-04-1514-01A-01D-0497-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1514-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1514-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1514-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1514-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.4.1.0/TCGA-04-1514-01A-01D-0498-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.4.1.0/TCGA-04-1514-01A-01D-0498-06.seg.txt TCGA-04-1514-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1514-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1514-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1514-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1514-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-04-1514-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-04-1514-01A-01R-0502-01.data.txt OV-04-1516-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1516.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1516.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1516.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1516.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-04-1516-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-04-1516-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-04-1516-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-04-1516-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-04-1516-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-04-1516-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1516-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1516-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-04-1516-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1516-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1516-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1516-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1516-01A-01D-1043-01.seg.txt TCGA-04-1516-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-04-1516-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-04-1516-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-04-1516-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-04-1516-01A-01R-1048-01.data.txt OV-04-1517-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-04-1517.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-04-1517.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-04-1517.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-04-1517.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-04-1517-01A-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-04-1517-01A-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-04-1517-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-04-1517-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-04-1517-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-04-1517-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1517-01A-01T-0541-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1517-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1517-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1517-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-04-1517-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1517-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1517-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1517-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1517-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-04-1517-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-04-1517-01A-01D-0535-06.seg.txt TCGA-04-1517-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1517-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1517-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1517-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1517-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-04-1517-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-04-1517-01A-01R-0538-01.data.txt OV-04-1519-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-04-1519.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-04-1519.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-04-1519.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-04-1519.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-04-1519-01A-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-04-1519-01A-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-04-1519-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-04-1519-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-04-1519-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-04-1519-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1519-01A-01T-0541-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1519-01A-21-1558-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1519-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-04-1519-01A-01R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-04-1519-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1519-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1519-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1519-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1519-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-04-1519-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-04-1519-01A-01D-0535-06.seg.txt TCGA-04-1519-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1519-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1519-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-04-1519-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-04-1519-01A-01R-0538-01.data.txt OV-04-1525-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-04-1525.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-04-1525.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-04-1525.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-04-1525.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-04-1525-01A-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-04-1525-01A-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-04-1525-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-04-1525-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-04-1525-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-04-1525-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1525-01A-01T-0541-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1525-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1525-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1525-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-04-1525-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1525-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1525-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1525-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1525-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-04-1525-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-04-1525-01A-01D-0535-06.seg.txt TCGA-04-1525-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1525-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1525-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1525-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1525-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-04-1525-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-04-1525-01A-01R-0538-01.data.txt OV-04-1530-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-04-1530.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-04-1530.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-04-1530.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-04-1530.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.15.2.0/TCGA-04-1530-01A-02D-0499-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.6.1.0/TCGA-04-1530-01A-02D-0500-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.15.2.0/TCGA-04-1530-01A-02R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.15.2.0/TCGA-04-1530-01A-02R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.15.2.0/TCGA-04-1530-01A-02R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.6.5.0/TCGA-04-1530-01A-02D-0501-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1530-01A-02T-0505-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1530-01A-02R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1530-01A-02R-1569-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.15.2002.0/TCGA-04-1530-01A-02D-0497-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1530-01A-02D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1530-01A-02D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1530-01A-02D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1530-01A-02D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.4.1.0/TCGA-04-1530-01A-02D-0498-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.4.1.0/TCGA-04-1530-01A-02D-0498-06.seg.txt TCGA-04-1530-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1530-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-04-1530-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1530-01A-02R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1530-01A-02R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-04-1530-01A-02R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-04-1530-01A-02R-0502-01.data.txt OV-04-1536-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-04-1536.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-04-1536.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-04-1536.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-04-1536.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-04-1536-01A-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-04-1536-01A-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-04-1536-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-04-1536-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-04-1536-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-04-1536-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1536-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1536-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-04-1536-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1536-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1536-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1536-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-04-1536-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-04-1536-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-04-1536-01A-01D-0535-06.seg.txt TCGA-04-1536-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1536-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1536-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-04-1536-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-04-1536-01A-01R-0538-01.data.txt OV-04-1542-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-04-1542.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-04-1542.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-04-1542.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-04-1542.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.15.2.0/TCGA-04-1542-01A-01D-0499-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.6.1.0/TCGA-04-1542-01A-01D-0500-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.15.2.0/TCGA-04-1542-01A-01R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.15.2.0/TCGA-04-1542-01A-01R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.15.2.0/TCGA-04-1542-01A-01R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.6.5.0/TCGA-04-1542-01A-01D-0501-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1542-01A-01T-0505-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1542-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1542-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1542-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.15.2002.0/TCGA-04-1542-01A-01D-0497-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1542-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1542-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1542-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-04-1542-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.4.1.0/TCGA-04-1542-01A-01D-0498-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.4.1.0/TCGA-04-1542-01A-01D-0498-06.seg.txt TCGA-04-1542-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1542-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-04-1542-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1542-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1542-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-04-1542-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-04-1542-01A-01R-0502-01.data.txt OV-04-1638-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1638.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1638.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1638.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1638.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-04-1638-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-04-1638-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-04-1638-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1638-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1638-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-04-1638-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1638-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1638-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1638-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1638-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-04-1638-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1638-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1638-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1638-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1638-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1638-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1638-01A-01D-0579-06.seg.txt TCGA-04-1638-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1638-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1638-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-04-1638-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-04-1638-01A-01R-0582-01.data.txt OV-04-1644-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1644.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-04-1644.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1644.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-04-1644.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-04-1644-01B-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-04-1644-01B-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-04-1644-01B-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-04-1644-01B-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-04-1644-01B-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-04-1644-01B-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1644-01B-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1644-01A-11-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-04-1644-01B-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1644-01B-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1644-01B-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1644-01B-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-04-1644-01B-01D-1043-01.seg.txt TCGA-04-1644-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-04-1644-01B-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-04-1644-01B-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-04-1644-01B-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-04-1644-01B-01R-1048-01.data.txt OV-04-1646-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1646.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1646.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1646.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1646.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-04-1646-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-04-1646-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-04-1646-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1646-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1646-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-04-1646-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1646-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1646-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1646-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1646-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-04-1646-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1646-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1646-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1646-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1646-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1646-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1646-01A-01D-0579-06.seg.txt TCGA-04-1646-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1646-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1646-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-04-1646-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-04-1646-01A-01R-0582-01.data.txt OV-04-1648-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1648.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1648.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1648.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1648.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-04-1648-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-04-1648-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-04-1648-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1648-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1648-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-04-1648-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1648-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1648-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1648-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1648-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-04-1648-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1648-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1648-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1648-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1648-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1648-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1648-01A-01D-0579-06.seg.txt TCGA-04-1648-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1648-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1648-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-04-1648-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-04-1648-01A-01R-0582-01.data.txt OV-04-1649-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1649.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1649.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1649.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1649.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-04-1649-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-04-1649-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-04-1649-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1649-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1649-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-04-1649-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1649-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1649-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1649-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1649-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-04-1649-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1649-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1649-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1649-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1649-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1649-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1649-01A-01D-0579-06.seg.txt TCGA-04-1649-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1649-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1649-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-04-1649-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-04-1649-01A-01R-0582-01.data.txt OV-04-1651-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1651.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1651.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1651.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1651.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-04-1651-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-04-1651-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-04-1651-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1651-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1651-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-04-1651-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1651-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1651-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1651-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1651-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-04-1651-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1651-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1651-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1651-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1651-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1651-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-04-1651-01A-01D-0579-06.seg.txt TCGA-04-1651-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1651-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1651-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-04-1651-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-04-1651-01A-01R-0582-01.data.txt OV-04-1652-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1652.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-04-1652.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1652.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-04-1652.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-04-1652-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-04-1652-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-04-1652-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1652-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-04-1652-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-04-1652-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-04-1652-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1652-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1652-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-04-1652-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1652-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1652-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-04-1652-01A-01D-0577-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-04-1654-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-04-1654-01A-11-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-04-1654-01A-02D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-04-1654-01A-02D-0648-01.seg.txt 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TCGA-04-1654-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1654-01A-02R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1654-01A-02R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-04-1654-01A-02R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-04-1654-01A-02R-0653-01.data.txt OV-04-1655-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-04-1655.clin.txt 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TCGA-04-1655-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-04-1655-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-04-1655-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-04-1655-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-04-1655-01A-01R-0564-01.data.txt OV-09-0364-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-09-0364.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-0364-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-0364-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-0364-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-0364-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-0364-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-09-0364-01A-02D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0364-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0364-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0364-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0364-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-09-0364-01A-02D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-09-0364-01A-02D-0358-06.seg.txt TCGA-09-0364-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-09-0364-01A-02R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-09-0364-01A-02R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-09-0364-01A-02R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-09-0364-01A-02R-0362-01.data.txt OV-09-0365-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-09-0365.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0365-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0365-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0365-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0365-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-09-0365-01A-02D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-09-0365-01A-02D-0358-06.seg.txt TCGA-09-0365-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-09-0365-01A-02R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-09-0365-01A-02R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-09-0365-01A-02R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-09-0365-01A-02R-0362-01.data.txt OV-09-0366-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-09-0366.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-09-0366.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-09-0366.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-09-0366.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0366-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0366-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0366-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-09-0366-01A-01D-0356-01.seg.txt 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TCGA-09-0367-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-09-0367-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-09-0367-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-09-0367-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-09-0367-01A-01R-0362-01.data.txt OV-09-0369-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-09-0369.clin.txt 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TCGA-09-1659-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-09-1659-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-09-1659-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1659-01B-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1659-01B-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-09-1659-01B-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-09-1661-01B-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1661-01B-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1661-01B-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1661-01B-01D-0533-01.seg.txt 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TCGA-09-1662-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-09-1662-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-09-1662-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1662-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1662-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-09-1662-01A-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-09-1665-01B-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-09-1665-01B-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1665-01B-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1665-01B-01D-0533-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1666-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1666-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-09-1666-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1666-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1666-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1666-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1666-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-09-1666-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-09-1666-01A-01D-0535-06.seg.txt TCGA-09-1666-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-09-1666-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-09-1666-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1666-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1666-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-09-1666-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-09-1666-01A-01R-0538-01.data.txt OV-09-1667-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-09-1667.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-09-1667.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-09-1667.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-09-1667.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-09-1667-01C-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-09-1667-01C-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-09-1667-01C-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-09-1667-01C-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-09-1667-01C-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-09-1667-01C-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-09-1667-01C-01T-0541-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-09-1667-01C-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-09-1667-01C-01R-1566-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1667-01C-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1667-01C-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1667-01C-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-09-1667-01C-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1667-01C-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1667-01C-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1667-01C-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1667-01C-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-09-1667-01C-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-09-1667-01C-01D-0535-06.seg.txt TCGA-09-1667-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1667-01C-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1667-01C-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-09-1667-01C-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-09-1667-01C-01R-0538-01.data.txt OV-09-1668-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-09-1668.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-09-1668.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-09-1668.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-09-1668.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1668-01B-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1668-01B-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1668-01B-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1668-01B-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-09-1668-01B-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-09-1668-01B-01D-0535-06.seg.txt TCGA-09-1668-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1668-01B-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1668-01B-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-09-1668-01B-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-09-1668-01B-01R-0538-01.data.txt OV-09-1669-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-09-1669.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-09-1669.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-09-1669.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-09-1669.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-09-1669-01A-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-09-1669-01A-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-09-1669-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-09-1669-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-09-1669-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-09-1669-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-09-1669-01A-01T-0541-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-09-1669-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-09-1669-01A-01R-1566-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1669-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1669-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1669-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-09-1669-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1669-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1669-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1669-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-09-1669-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1669-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1669-01A-01D-0535-06.seg.txt TCGA-09-1669-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-09-1669-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-09-1669-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1669-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1669-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-09-1669-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-09-1669-01A-01R-0538-01.data.txt OV-09-1670-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-09-1670.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-09-1670.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1670-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1670-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1670-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1670-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1670-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-09-1670-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1670-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1670-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1670-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1670-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1670-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1670-01A-01D-0560-06.seg.txt TCGA-09-1670-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1670-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1670-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-09-1670-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-09-1670-01A-01R-0564-01.data.txt OV-09-1672-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-09-1672.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-09-1672-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1672-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1672-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1672-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1672-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1672-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1672-01A-01D-0560-06.seg.txt TCGA-09-1672-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1672-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1672-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-09-1672-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-09-1672-01A-01R-0564-01.data.txt OV-09-1673-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-09-1673.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-09-1673.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1673-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-09-1673-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1673-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1673-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1673-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1673-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1673-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1673-01A-01D-0560-06.seg.txt TCGA-09-1673-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1673-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1673-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-09-1673-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-09-1673-01A-01R-0564-01.data.txt OV-09-1674-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-09-1674.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1674-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-1674-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-09-1674-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1674-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1674-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1674-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1674-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-09-1674-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-09-1674-01A-01D-0560-06.seg.txt TCGA-09-1674-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1674-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1674-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-09-1674-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-09-1674-01A-01R-0564-01.data.txt OV-09-1675-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-09-1675.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-09-1675.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-09-1675.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-09-1675.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-09-1675-01B-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-09-1675-01B-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-09-1675-01B-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-09-1675-01B-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-09-1675-01B-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-09-1675-01B-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-09-1675-01B-01T-0567-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-09-1675-01B-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1675-01B-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1675-01B-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1675-01B-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-09-1675-01B-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1675-01B-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-09-1675-01B-01D-0560-06.seg.txt TCGA-09-1675-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-1675-01B-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-1675-01B-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-09-1675-01B-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-09-1675-01B-01R-0564-01.data.txt OV-09-2043-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2043.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2043.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-09-2043.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-09-2043.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.24.1.0/TCGA-09-2043-01A-01D-0705-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.6.0.0/TCGA-09-2043-01A-01D-0707-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.24.1.0/TCGA-09-2043-01A-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.24.1.0/TCGA-09-2043-01A-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.24.1.0/TCGA-09-2043-01A-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.12.5.0/TCGA-09-2043-01A-01D-0708-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-09-2043-01A-01T-0712-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-09-2043-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-09-2043-01A-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2043-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2043-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2043-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2043-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-09-2043-01A-01D-0706-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-09-2043-01A-01D-0706-06.seg.txt TCGA-09-2043-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-2043-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-2043-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-09-2043-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-09-2043-01A-01R-0709-01.data.txt OV-09-2044-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2044.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2044.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-09-2044.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-09-2044.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.24.1.0/TCGA-09-2044-01B-01D-0705-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.6.0.0/TCGA-09-2044-01B-01D-0707-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.24.1.0/TCGA-09-2044-01B-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.24.1.0/TCGA-09-2044-01B-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.24.1.0/TCGA-09-2044-01B-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.12.5.0/TCGA-09-2044-01B-01D-0708-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-09-2044-01B-01T-0712-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-09-2044-01B-21-1560-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2044-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2044-01B-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-09-2044-01B-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2044-01B-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2044-01B-01D-0704-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-09-2044-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-09-2044-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-2044-01B-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-2044-01B-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-09-2044-01B-01R-0709-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-09-2045-01A-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2045-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2045-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2045-01A-01D-0704-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-2048-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-2048-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-09-2048-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-09-2048-01A-01R-0709-01.data.txt OV-09-2049-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2049.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-09-2049-01D-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-09-2049-01D-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2049-01D-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2049-01D-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2049-01D-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2049-01D-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-09-2049-01D-01D-0706-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-09-2049-01D-01D-0706-06.seg.txt TCGA-09-2049-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-09-2049-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-09-2049-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-2049-01D-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-2049-01D-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-09-2049-01D-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-09-2049-01D-01R-0709-01.data.txt OV-09-2050-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2050.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2050.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-09-2050.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-09-2050.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-09-2050-01A-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2050-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2050-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2050-01A-01D-0704-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-2050-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-2050-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-09-2050-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-09-2050-01A-01R-0709-01.data.txt OV-09-2051-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2051.clin.txt 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TCGA-09-2054-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-2054-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-2054-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-09-2054-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-09-2054-01A-01R-0668-01.data.txt OV-09-2055-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-09-2055.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.24.1.0/TCGA-09-2055-01B-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.24.1.0/TCGA-09-2055-01B-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.24.1.0/TCGA-09-2055-01B-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.12.5.0/TCGA-09-2055-01B-01D-0708-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-09-2055-01B-01T-0712-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-09-2055-01A-11-1563-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-09-2055-01B-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2055-01B-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2055-01B-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2055-01B-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-09-2055-01B-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-09-2055-01B-01D-0706-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-09-2055-01B-01D-0706-06.seg.txt TCGA-09-2055-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-2055-01B-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-2055-01B-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-09-2055-01B-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-09-2055-01B-01R-0709-01.data.txt OV-09-2056-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-09-2056.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-09-2056.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-09-2056.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-09-2056.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.22.2.0/TCGA-09-2056-01B-01D-0664-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.5.0.0/TCGA-09-2056-01B-01D-0666-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.22.1.0/TCGA-09-2056-01B-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-09-2056-01B-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-09-2056-01B-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.11.5.0/TCGA-09-2056-01B-01D-0667-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-09-2056-01B-01T-0671-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-09-2056-01B-21-1560-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2056-01B-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-09-2056-01B-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-09-2056-01B-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-09-2056-01B-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-09-2056-01B-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-09-2056-01B-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-09-2056-01B-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-09-2056-01B-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-09-2056-01B-01D-0665-06.seg.txt TCGA-09-2056-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-09-2056-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-09-2056-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-09-2056-01B-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-09-2056-01B-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-09-2056-01B-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-09-2056-01B-01R-0668-01.data.txt OV-10-0925-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-10-0925.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-10-0925.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-10-0925.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-10-0925-01B-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-10-0925-01B-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-10-0925-01B-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-10-0925-01A-11-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-10-0925-01B-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-10-0925-01B-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-10-0925-01B-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-10-0925-01B-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-10-0925-01B-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-10-0925-01B-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-10-0925-01B-01D-0650-06.seg.txt TCGA-10-0925-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0925-01B-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0925-01B-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-10-0925-01B-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-10-0925-01B-01R-0653-01.data.txt OV-10-0926-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0926.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0926.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0926.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0926.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-10-0926-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-10-0926-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-10-0926-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0926-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0926-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-10-0926-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-10-0926-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-10-0926-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-10-0926-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-10-0926-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0926-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0926-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0926-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0926-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0926-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0926-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0926-01A-01D-0401-06.seg.txt TCGA-10-0926-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-10-0926-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-10-0926-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0926-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0926-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0926-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0926-01A-01R-0404-01.data.txt OV-10-0927-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0927.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0927.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0927.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0927.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-10-0927-01A-02D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-10-0927-01A-02D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-10-0927-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0927-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0927-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-10-0927-01A-02D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-10-0927-01A-02T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-10-0927-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-10-0927-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0927-01A-02D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0927-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0927-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0927-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0927-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0927-01A-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0927-01A-02D-0401-06.seg.txt TCGA-10-0927-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-10-0927-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-10-0927-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0927-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0927-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0927-01A-02R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0927-01A-02R-0404-01.data.txt OV-10-0928-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0928.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0928.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0928.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0928.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-10-0928-01A-02D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-10-0928-01A-02D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-10-0928-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0928-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0928-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-10-0928-01A-02D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-10-0928-01A-02T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-10-0928-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-10-0928-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-10-0928-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-10-0928-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-10-0928-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0928-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0928-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0928-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0928-01A-02R-1564-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0928-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0928-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0928-01A-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0928-01A-02D-0401-06.seg.txt TCGA-10-0928-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-10-0928-01.wig.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0930-01A-02D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0930-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0930-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0930-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0930-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0930-01A-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0930-01A-02D-0401-06.seg.txt TCGA-10-0930-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-10-0930-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-10-0930-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0930-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0930-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0930-01A-02R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0930-01A-02R-0404-01.data.txt OV-10-0931-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0931.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-10-0931-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0931-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0931-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-10-0931-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-10-0931-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-10-0931-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0931-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0931-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0931-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0931-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0931-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0931-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0931-01A-01D-0401-06.seg.txt TCGA-10-0931-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-10-0931-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-10-0931-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0931-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0931-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0931-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0931-01A-01R-0404-01.data.txt OV-10-0933-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0933.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0933.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0933.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0933.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-10-0933-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0933-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0933-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0933-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0933-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0933-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0933-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0933-01A-01D-0401-06.seg.txt TCGA-10-0933-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-10-0933-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-10-0933-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0933-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0933-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0933-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0933-01A-01R-0404-01.data.txt OV-10-0934-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0934.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0934.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0934.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0934-01A-02D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0934-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0934-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0934-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0934-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0934-01A-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0934-01A-02D-0401-06.seg.txt TCGA-10-0934-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-10-0934-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-10-0934-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0934-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0934-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0934-01A-02R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0934-01A-02R-0404-01.data.txt OV-10-0935-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0935.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0935-01A-03D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0935-01A-03D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0935-01A-03D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0935-01A-03D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0935-01A-03D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0935-01A-03D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0935-01A-03D-0401-06.seg.txt TCGA-10-0935-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-10-0935-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-10-0935-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0935-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0935-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0935-01A-02R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0935-01A-02R-0404-01.data.txt OV-10-0936-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0936.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0936.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0936.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0936.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-10-0936-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-10-0936-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-10-0936-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0936-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0936-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-10-0936-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-10-0936-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-10-0936-01A-21-1561-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-10-0936-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-10-0936-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-10-0936-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0936-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0936-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0936-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0936-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-10-0936-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0936-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0936-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0936-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0936-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0936-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0936-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0936-01A-01D-0401-06.seg.txt TCGA-10-0936-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0936-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0936-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0936-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0936-01A-01R-0404-01.data.txt OV-10-0937-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0937.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0937.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0937.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0937.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-10-0937-01A-02D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-10-0937-01A-02D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-10-0937-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0937-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0937-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-10-0937-01A-02D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-10-0937-01A-02T-0407-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0937-01A-02D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0937-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0937-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0937-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0937-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0937-01A-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0937-01A-02D-0401-06.seg.txt TCGA-10-0937-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-10-0937-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-10-0937-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0937-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0937-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0937-01A-02R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0937-01A-02R-0404-01.data.txt OV-10-0938-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0938.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-10-0938.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0938.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-10-0938.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-10-0938-01A-02D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-10-0938-01A-02D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-10-0938-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0938-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-10-0938-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-10-0938-01A-02D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-10-0938-01A-02T-0407-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-10-0938-01A-02D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0938-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0938-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0938-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-10-0938-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0938-01A-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-10-0938-01A-02D-0401-06.seg.txt TCGA-10-0938-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-10-0938-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-10-0938-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-10-0938-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-10-0938-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-10-0938-01A-02R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-10-0938-01A-02R-0404-01.data.txt OV-13-0714-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0714.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0714.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0714.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0714.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0714-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0714-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0714-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0714-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0714-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0714-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0714-01A-01T-0364-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0714-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0714-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0714-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0714-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0714-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0714-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0714-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0714-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0714-01A-01D-0358-06.seg.txt TCGA-13-0714-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0714-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0714-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0714-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0714-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0714-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0714-01A-01R-0362-01.data.txt OV-13-0717-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0717.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0717.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0717.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0717.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0717-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0717-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0717-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0717-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0717-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0717-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0717-01A-01T-0364-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0717-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0717-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0717-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0717-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0717-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0717-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0717-01A-01D-0358-06.seg.txt TCGA-13-0717-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0717-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0717-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0717-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0717-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0717-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0717-01A-01R-0362-01.data.txt OV-13-0720-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0720.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0720.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0720.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0720.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0720-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0720-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0720-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0720-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0720-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0720-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0720-01A-01T-0364-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0720-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0720-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0720-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0720-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0720-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0720-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0720-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0720-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0720-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0720-01A-01D-0358-06.seg.txt TCGA-13-0720-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0720-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0720-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0720-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0720-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0720-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0720-01A-01R-0362-01.data.txt OV-13-0723-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0723.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0723.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0723.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0723.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0723-01A-02D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0723-01A-02D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0723-01A-02R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0723-01A-02R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0723-01A-02R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0723-01A-02D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0723-01A-02T-0364-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0723-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0723-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0723-01A-02D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0723-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0723-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0723-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0723-01A-02D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0723-01A-02D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0723-01A-02D-0358-06.seg.txt TCGA-13-0723-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0723-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0723-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0723-01A-02R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0723-01A-02R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0723-01A-02R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0723-01A-02R-0362-01.data.txt OV-13-0724-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0724.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0724.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0724.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0724.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0724-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0724-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0724-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0724-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0724-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0724-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0724-01A-01T-0364-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0724-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0724-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0724-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0724-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0724-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0724-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0724-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0724-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0724-01A-01D-0358-06.seg.txt TCGA-13-0724-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0724-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0724-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0724-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0724-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0724-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0724-01A-01R-0362-01.data.txt OV-13-0725-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0725.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0725.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0725.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0725.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0725-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0725-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0725-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0725-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0725-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0725-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0725-01A-01T-0364-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0725-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0725-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0725-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0725-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0725-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0725-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0725-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0725-01A-01D-0358-06.seg.txt TCGA-13-0725-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0725-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0725-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0725-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0725-01A-01R-0362-01.data.txt OV-13-0726-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0726.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0726.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0726.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0726.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0726-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0726-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0726-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0726-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0726-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0726-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0726-01A-01T-0364-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0726-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0726-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0726-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0726-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0726-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0726-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0726-01A-01D-0358-06.seg.txt TCGA-13-0726-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0726-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0726-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0726-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0726-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0726-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0726-01A-01R-0362-01.data.txt OV-13-0727-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0727.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0727.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0727.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0727.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0727-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0727-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0727-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0727-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0727-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0727-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0727-01A-01T-0364-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0727-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0727-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0727-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0727-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0727-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0727-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0727-01A-01D-0358-06.seg.txt TCGA-13-0727-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0727-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0727-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0727-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0727-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0727-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0727-01A-01R-0362-01.data.txt OV-13-0730-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0730.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0730.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0730.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0730.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0730-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0730-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0730-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0730-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0730-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0730-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0730-01A-01T-0364-07.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0730-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0730-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0730-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0730-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0730-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0730-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0730-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0730-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0730-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0730-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0730-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0730-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0730-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0730-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0730-01A-01D-0358-06.seg.txt TCGA-13-0730-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0730-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0730-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0730-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0730-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0730-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0730-01A-01R-0362-01.data.txt OV-13-0751-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0751.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0751.clin.txt 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OV-13-0755-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0755.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0755.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0755.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0755.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0755-01A-01D-0508-04.seg.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0755-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0755-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0755-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0755-01A-01D-0356-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0757-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0757-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0757-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0757-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0757-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0757-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0757-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0757-01A-01D-0358-06.seg.txt TCGA-13-0757-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0757-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0757-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0757-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0757-01A-01R-0362-01.data.txt OV-13-0758-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0758.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0758.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0758.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0758.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0758-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0758-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0758-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0758-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0758-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0758-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0758-01A-01T-0364-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0758-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0758-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0758-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0758-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0758-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0758-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0758-01A-01D-0358-06.seg.txt TCGA-13-0758-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0758-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0758-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0758-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0758-01A-01R-0362-01.data.txt OV-13-0760-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0760.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0760.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0760.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0760.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0760-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0760-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0760-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0760-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0760-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0760-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0760-01A-01T-0364-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0760-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0760-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0760-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0760-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0760-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0760-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0760-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0760-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0760-01A-01D-0358-06.seg.txt TCGA-13-0760-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0760-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0760-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0760-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0760-01A-01R-0363-07.data.txt OV-13-0761-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0761.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0761.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0761.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0761.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.9.2.0/TCGA-13-0761-01A-01D-0508-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.1.1.0/TCGA-13-0761-01A-01D-0360-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-13-0761-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0761-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0761-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0761-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0761-01A-01T-0364-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0761-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0761-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0761-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0761-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0761-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0761-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0761-01A-01D-0358-06.seg.txt TCGA-13-0761-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0761-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0761-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0761-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0761-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0761-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0761-01A-01R-0362-01.data.txt OV-13-0762-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0762.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0762-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0762-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0762-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0762-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0762-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0762-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0762-01A-01D-0358-06.seg.txt TCGA-13-0762-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0762-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0762-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0762-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0762-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0762-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0762-01A-01R-0362-01.data.txt OV-13-0764-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0764.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0764-01A-03D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0764-01A-03D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0764-01A-03D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0764-01A-03D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0764-01A-03D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0764-01A-03D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0764-01A-03D-0358-06.seg.txt TCGA-13-0764-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0764-01A-03R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0764-01A-03R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0764-01A-03R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0764-01A-03R-0362-01.data.txt OV-13-0765-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0765.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0765.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0765-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-13-0765-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.1.5.0/TCGA-13-0765-01A-01D-0359-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0765-01A-01T-0364-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0765-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0765-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0765-01A-01D-0358-06.seg.txt TCGA-13-0765-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0765-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0765-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0765-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0765-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0765-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0765-01A-01R-0362-01.data.txt OV-13-0766-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0766.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0766.clin.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0766-01A-02R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0766-01A-02R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0766-01A-02R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0766-01A-02R-0362-01.data.txt OV-13-0768-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0768.clin.txt 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TCGA-13-0768-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0768-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0768-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0768-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0768-01A-01R-0362-01.data.txt OV-13-0791-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0791.clin.txt 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TCGA-13-0791-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0791-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0791-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0791-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0791-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0791-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0791-01A-01R-0362-01.data.txt OV-13-0792-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0792.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0792.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0792.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0792-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0792-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0792-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0792-01A-01D-0356-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0792-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0792-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0792-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0792-01A-01R-0362-01.data.txt OV-13-0793-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0793.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0793-01A-03-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0793-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0793-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0793-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0793-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0793-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0793-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0793-01A-01D-0358-06.seg.txt TCGA-13-0793-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0793-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0793-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0793-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0793-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0793-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0793-01A-01R-0362-01.data.txt OV-13-0794-TP 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0794-01A-03-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0794-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0794-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0794-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0794-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0794-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0794-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0794-01A-01D-0358-06.seg.txt TCGA-13-0794-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0794-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0794-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0794-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0794-01A-01R-0362-01.data.txt OV-13-0795-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0795.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0795-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0795-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0795-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0795-01A-01D-0356-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0800-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0800-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0800-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0800-01A-01R-0363-07.data.txt 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TCGA-13-0802-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0802-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0802-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0802-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0802-01A-01R-0362-01.data.txt OV-13-0803-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0803.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0803-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0803-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0803-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0803-01A-01D-0356-01.seg.txt 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TCGA-13-0803-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0803-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0803-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0803-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0803-01A-01R-0362-01.data.txt OV-13-0804-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0804.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0804-01A-03-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0804-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0804-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0804-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0804-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0804-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0804-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0804-01A-01D-0358-06.seg.txt TCGA-13-0804-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0804-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0804-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0804-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0804-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0804-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0804-01A-01R-0362-01.data.txt OV-13-0805-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0805.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.9.31.0/TCGA-13-0805.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.9.32.0/TCGA-13-0805.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.9.2002.0/TCGA-13-0805-01A-01D-0356-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0805-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0805-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0805-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.9.2002.0/TCGA-13-0805-01A-01D-0356-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0805-01A-01D-0358-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0805-01A-01D-0358-06.seg.txt TCGA-13-0805-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_2.1.0.0/TCGA-13-0805-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_2__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_2.Level_3.1.0.0/TCGA-13-0805-01A-01R-0363-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.9.1007.0/TCGA-13-0805-01A-01R-0362-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.9.1007.0/TCGA-13-0805-01A-01R-0362-01.data.txt OV-13-0807-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0807.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0807.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0807-01B-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0807-01B-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0807-01B-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0807-01B-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0807-01B-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0807-01B-02D-0401-06.seg.txt TCGA-13-0807-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0807-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0807-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0807-01B-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0807-01B-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0807-01B-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0807-01B-01R-0404-01.data.txt OV-13-0883-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0883.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0883.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0883-01A-02D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0883-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0883-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0883-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0883-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0883-01A-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0883-01A-02D-0401-06.seg.txt TCGA-13-0883-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0883-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0883-01.maf.txt 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TCGA-13-0884-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0884-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0884-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0884-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0884-01B-01R-0456-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0885-01A-02D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0885-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0885-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0885-01A-02D-0399-01.seg.txt 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TCGA-13-0887-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0887-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0887-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0887-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0887-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0887-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0887-01A-01R-0404-01.data.txt OV-13-0888-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0888.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0888.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0888.clin.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0888-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0888-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0888-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0888-01A-01R-0404-01.data.txt OV-13-0889-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0889.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0889-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0889-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0889-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0889-01A-01D-0399-01.seg.txt 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TCGA-13-0889-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0889-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0889-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0889-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0889-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0889-01A-01R-0404-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0890-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0890-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0890-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0890-01A-01R-1564-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0890-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0890-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0890-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0890-01A-01D-0399-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0890-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0890-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0890-01A-01R-0404-01.data.txt OV-13-0891-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0891.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0891.clin.txt 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TCGA-13-0891-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0891-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0891-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0891-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0891-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0891-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0891-01A-01R-0404-01.data.txt OV-13-0893-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0893.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0893.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-13-0893.clin.txt 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TCGA-13-0897-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0897-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0897-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0897-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0897-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0897-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0897-01A-01R-0404-01.data.txt OV-13-0899-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0899.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0899.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0899.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0899-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0899-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0899-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0899-01A-21-1561-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0899-01A-01R-1564-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0899-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0899-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0899-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0899-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0899-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0899-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0899-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0899-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0899-01A-01D-0401-06.seg.txt TCGA-13-0899-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0899-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0899-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0899-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0899-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0899-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0899-01A-01R-0404-01.data.txt OV-13-0900-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0900.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0900.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-13-0900.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-13-0900-01B-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0900-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0900-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0900-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0900-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0900-01B-01D-0458-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0900-01B-01D-0458-06.seg.txt TCGA-13-0900-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0900-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0900-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0900-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0900-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-0900-01B-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-0900-01B-01R-0453-01.data.txt OV-13-0901-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0901.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.13.2.0/TCGA-13-0901-01B-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.13.2.0/TCGA-13-0901-01B-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.4.5.0/TCGA-13-0901-01B-01D-0460-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0901-01B-01T-0455-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0901-01B-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0901-01B-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0901-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-13-0901-01B-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0901-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0901-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0901-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0901-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0901-01B-01D-0458-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0901-01B-01D-0458-06.seg.txt TCGA-13-0901-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0901-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0901-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-0901-01B-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-0901-01B-01R-0453-01.data.txt OV-13-0903-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0903.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0903.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0903.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0903.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-13-0903-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-13-0903-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-13-0903-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0903-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0903-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0903-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0903-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0903-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0903-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0903-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0903-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0903-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0903-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0903-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0903-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0903-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0903-01A-01D-0401-06.seg.txt TCGA-13-0903-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0903-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0903-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0903-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0903-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0903-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0903-01A-01R-0404-01.data.txt OV-13-0904-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0904.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0904.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0904.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0904.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-13-0904-01A-02D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-13-0904-01A-02D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-13-0904-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0904-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0904-01A-02R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0904-01A-02D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0904-01A-02T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0904-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0904-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0904-01A-02D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0904-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0904-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0904-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0904-01A-02D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0904-01A-02D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0904-01A-02D-0401-06.seg.txt TCGA-13-0904-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0904-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0904-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0904-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0904-01A-02R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0904-01A-02R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0904-01A-02R-0404-01.data.txt OV-13-0905-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0905.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0905.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-13-0905.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-13-0905.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.13.2.0/TCGA-13-0905-01B-01D-0457-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.13.2.0/TCGA-13-0905-01B-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.13.2.0/TCGA-13-0905-01B-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.13.2.0/TCGA-13-0905-01B-01R-0454-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.4.5.0/TCGA-13-0905-01B-01D-0460-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0905-01B-01T-0455-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0905-01B-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0905-01B-01R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-13-0905-01B-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0905-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0905-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0905-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0905-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0905-01B-01D-0458-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0905-01B-01D-0458-06.seg.txt TCGA-13-0905-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0905-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0905-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0905-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0905-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-0905-01B-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-0905-01B-01R-0453-01.data.txt OV-13-0906-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0906.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0906.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0906-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0906-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0906-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0906-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0906-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0906-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0906-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0906-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0906-01A-01D-0401-06.seg.txt TCGA-13-0906-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0906-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0906-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0906-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0906-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0906-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0906-01A-01R-0404-01.data.txt OV-13-0908-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0908.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-0908.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-13-0908.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-13-0908.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0908-01B-01T-0455-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0908-01B-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0908-01B-01R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-13-0908-01B-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0908-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0908-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0908-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-0908-01B-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.2.2.0/TCGA-13-0908-01B-01D-0458-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.2.2.0/TCGA-13-0908-01B-01D-0458-06.seg.txt TCGA-13-0908-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0908-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0908-01B-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-0908-01B-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-0908-01B-01R-0453-01.data.txt OV-13-0910-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0910.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0910.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0910.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0910.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0910-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0910-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0910-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0910-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0910-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0910-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0910-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0910-01A-01D-0401-06.seg.txt TCGA-13-0910-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0910-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0910-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0910-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0910-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0910-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0910-01A-01R-0404-01.data.txt OV-13-0911-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0911.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0911.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0911.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0911-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0911-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0911-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0911-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0911-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0911-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0911-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0911-01A-01D-0401-06.seg.txt TCGA-13-0911-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0911-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0911-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0911-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0911-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0911-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0911-01A-01R-0404-01.data.txt OV-13-0912-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0912.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0912.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0912.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0912.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0912-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0912-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0912-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0912-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0912-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0912-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0912-01A-01D-0401-06.seg.txt TCGA-13-0912-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0912-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0912-01.maf.txt 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TCGA-13-0913-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0913-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0913-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0913-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0913-01A-01R-0406-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0916-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0916-01A-01R-0404-01.data.txt OV-13-0919-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0919.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0919.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0919.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0919-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0919-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0919-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0919-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0919-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0919-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0919-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0919-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0919-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0919-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0919-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0919-01A-01D-0401-06.seg.txt TCGA-13-0919-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0919-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-0919-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0919-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0919-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0919-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0919-01A-01R-0404-01.data.txt OV-13-0920-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0920.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0920.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0920.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0920.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-13-0920-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-13-0920-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-13-0920-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0920-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0920-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0920-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0920-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0920-01A-21-1561-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0920-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0920-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0920-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0920-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0920-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0920-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0920-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0920-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0920-01A-01D-0401-06.seg.txt TCGA-13-0920-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0920-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0920-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0920-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0920-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0920-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0920-01A-01R-0404-01.data.txt OV-13-0921-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0921.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0921.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0921.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0921.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-13-0921-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-13-0921-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-13-0921-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0921-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0921-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0921-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0921-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0921-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0921-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-0921-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0921-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0921-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0921-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0921-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0921-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0921-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0921-01A-01D-0401-06.seg.txt TCGA-13-0921-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0921-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0921-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0921-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0921-01A-01R-0404-01.data.txt OV-13-0922-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0922.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0922.clin.txt TP TCGA-13-0922 OV-13-0923-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0923.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0923.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0923.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0923.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-13-0923-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-13-0923-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-13-0923-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0923-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0923-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0923-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0923-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0923-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0923-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0923-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0923-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0923-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0923-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0923-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0923-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0923-01A-01D-0401-06.seg.txt TCGA-13-0923-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0923-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-0923-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0923-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0923-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0923-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0923-01A-01R-0404-01.data.txt OV-13-0924-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0924.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-13-0924.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0924.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-13-0924.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-13-0924-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-13-0924-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-13-0924-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0924-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-13-0924-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-13-0924-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-0924-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0924-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-0924-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-13-0924-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0924-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0924-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0924-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-13-0924-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0924-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-0924-01A-01D-0401-06.seg.txt TCGA-13-0924-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0924-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-0924-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-0924-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-0924-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-13-0924-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-13-0924-01A-01R-0404-01.data.txt OV-13-1403-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-1403.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-1403.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-13-1403.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1404-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1404-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1404-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1404-01A-01R-0456-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-13-1405-01A-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-1405-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-1405-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-1405-01A-01D-0452-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1405-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1405-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-1405-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-1405-01A-01R-0453-01.data.txt OV-13-1407-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-1407.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-1408-01A-01D-0458-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-13-1408-01A-01D-0458-06.seg.txt TCGA-13-1408-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-1408-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-13-1408-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1408-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1408-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-1408-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-1408-01A-01R-0453-01.data.txt OV-13-1409-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-1409.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-1409.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1409-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1409-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1409-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1409-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-1409-01A-01R-0453-01.data.txt 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TCGA-13-1410-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1410-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1410-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1410-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1410-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-1410-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-1410-01A-01R-0453-01.data.txt OV-13-1411-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-1411.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-1411.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-13-1411.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-13-1411-01A-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-1411-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-1411-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-13-1411-01A-01D-0452-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1411-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1411-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-1411-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-1411-01A-01R-0453-01.data.txt OV-13-1412-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-13-1412.clin.txt 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TCGA-13-1412-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1412-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1412-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1412-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1412-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-13-1412-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-13-1412-01A-01R-0453-01.data.txt OV-13-1477-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1477.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1477.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1477.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-1477-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1477-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1477-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1477-01A-01D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1477-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1477-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1477-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1477-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1477-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1477-01A-01R-0477-01.data.txt OV-13-1481-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1481.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1481.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1481.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1481.clin.txt 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TCGA-13-1481-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1481-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1481-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1481-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1481-01A-01R-0479-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1482-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1482-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1482-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1482-01A-01R-0479-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1483-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1483-01A-01R-0477-01.data.txt OV-13-1484-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1484.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1484.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1484.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-1484-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1484-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1484-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1484-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1484-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1484-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1484-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1484-01A-01D-0474-06.seg.txt TCGA-13-1484-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1484-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1484-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1484-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1484-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1484-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1484-01A-01R-0477-01.data.txt OV-13-1485-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1485.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1485.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1485.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1485.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-1485-01A-02T-0480-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-1485-01A-02R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-1485-01A-02R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1485-01A-02D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1485-01A-02D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1485-01A-02D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1485-01A-02D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1485-01A-02D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1485-01A-02D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1485-01A-02D-0474-06.seg.txt TCGA-13-1485-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1485-01A-02R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1485-01A-02R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1485-01A-02R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1485-01A-02R-0477-01.data.txt OV-13-1487-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1487.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1487.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1487.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1487.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1487-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1487-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1487-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1487-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1487-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1487-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1487-01A-01D-0474-06.seg.txt TCGA-13-1487-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1487-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1487-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1487-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1487-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1487-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1487-01A-01R-0477-01.data.txt OV-13-1488-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1488.clin.txt 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TCGA-13-1488-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1488-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1488-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1488-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1488-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1488-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1488-01A-01R-0477-01.data.txt OV-13-1489-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1489.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1489.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1489.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1489-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1489-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1489-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1489-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1489-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1489-01A-01R-0477-01.data.txt OV-13-1491-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1491.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1491.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1491.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1491-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1491-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1491-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1491-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1491-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1491-01A-01R-0477-01.data.txt OV-13-1492-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1492.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1492.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1492.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1492-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1492-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1492-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1492-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1492-01A-01R-0477-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1494-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1494-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1494-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1494-01A-01D-0472-01.seg.txt 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TCGA-13-1495-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1495-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1495-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1495-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1495-01A-01R-0479-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1496-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1496-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1496-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1496-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1496-01A-01R-0477-01.data.txt 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TCGA-13-1497-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1497-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1497-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1497-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1497-01A-01R-0479-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1498-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1498-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1498-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1498-01A-01D-0472-01.seg.txt 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TCGA-13-1499-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1499-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1499-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1499-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1499-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1499-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1499-01A-01R-0477-01.data.txt OV-13-1500-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1500.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1500.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1500.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1500-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1500-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1500-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1500-01A-01D-0474-06.seg.txt TCGA-13-1500-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1500-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1500-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1500-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1500-01A-01R-0477-01.data.txt OV-13-1501-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1501.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1501.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1501.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1501.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.14.2.0/TCGA-13-1501-01A-01D-0473-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.14.2.0/TCGA-13-1501-01A-01R-0478-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.14.2.0/TCGA-13-1501-01A-01R-0478-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.14.2.0/TCGA-13-1501-01A-01R-0478-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.5.5.0/TCGA-13-1501-01A-01D-0475-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-1501-01A-01T-0480-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-1501-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-1501-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-1501-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1501-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1501-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1501-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1501-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1501-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1501-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1501-01A-01D-0474-06.seg.txt TCGA-13-1501-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1501-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1501-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1501-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1501-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1501-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1501-01A-01R-0477-01.data.txt OV-13-1504-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1504.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1504.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1504.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.5.5.0/TCGA-13-1504-01A-01D-0475-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-1504-01A-01T-0480-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-1504-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-1504-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-1504-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1504-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1504-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1504-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1504-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1504-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1504-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1504-01A-01D-0474-06.seg.txt TCGA-13-1504-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1504-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1504-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1504-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1504-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1504-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1504-01A-01R-0477-01.data.txt OV-13-1505-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1505.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1505.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1505.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1505.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-1505-01A-01T-0480-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-1505-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-1505-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-1505-01A-21-1562-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-1505-01A-01R-1565-13.data.txt 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TCGA-13-1505-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1505-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1505-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1505-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1505-01A-01R-0479-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1507-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1507-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1507-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1507-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1507-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1507-01A-01R-0477-01.data.txt OV-13-1509-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1509.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1509.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1509.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-1509-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1509-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1509-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1509-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1509-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1509-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1509-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1509-01A-01D-0474-06.seg.txt TCGA-13-1509-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1509-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-13-1509-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1509-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1509-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1509-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1509-01A-01R-0477-01.data.txt OV-13-1510-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1510.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1510.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1510.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1510-01A-02D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1510-01A-02D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1510-01A-02D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1510-01A-02D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-1511-01A-01R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1511-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1511-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1511-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1511-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1511-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1511-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1511-01A-01D-0474-06.seg.txt TCGA-13-1511-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1511-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1511-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1511-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1511-01A-01R-0477-01.data.txt OV-13-1512-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1512.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-13-1512.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1512.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-13-1512.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.14.2.0/TCGA-13-1512-01A-01D-0473-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.14.2.0/TCGA-13-1512-01A-01R-0478-03.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-1512-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-1512-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-1512-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-1512-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-1512-01A-01R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-13-1512-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1512-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1512-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1512-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-13-1512-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1512-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-13-1512-01A-01D-0474-06.seg.txt TCGA-13-1512-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1512-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-1512-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1512-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1512-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-13-1512-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-13-1512-01A-01R-0477-01.data.txt OV-13-1817-TP /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.27.1.0/TCGA-13-1817-01A-01D-0804-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.7.0.0/TCGA-13-1817-01A-01D-0806-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.27.0.0/TCGA-13-1817-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-13-1817-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-13-1817-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.13.5.0/TCGA-13-1817-01A-01D-0807-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-1817-01A-01T-0811-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-1817-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.27.2002.0/TCGA-13-1817-01A-01D-2069-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-13-1817-01A-01D-2069-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-13-1817-01A-01D-2069-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-13-1817-01A-01D-2069-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-13-1817-01A-01D-2069-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-13-1817-01A-01D-0805-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-13-1817-01A-01D-0805-06.seg.txt TCGA-13-1817-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1817-01A-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1817-01A-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.27.1007.0/TCGA-13-1817-01A-01R-0808-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.27.1007.0/TCGA-13-1817-01A-01R-0808-01.data.txt OV-13-1819-TP /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.27.1.0/TCGA-13-1819-01A-01D-0804-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.7.0.0/TCGA-13-1819-01A-01D-0806-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.27.0.0/TCGA-13-1819-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-13-1819-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-13-1819-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.13.5.0/TCGA-13-1819-01A-01D-0807-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-1819-01A-01T-0811-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-1819-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.27.2002.0/TCGA-13-1819-01A-01D-2069-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-13-1819-01A-01D-2069-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-13-1819-01A-01D-2069-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-13-1819-01A-01D-2069-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-13-1819-01A-01D-2069-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-13-1819-01A-01D-0805-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-13-1819-01A-01D-0805-06.seg.txt TCGA-13-1819-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-1819-01A-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-1819-01A-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.27.1007.0/TCGA-13-1819-01A-01R-0808-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.27.1007.0/TCGA-13-1819-01A-01R-0808-01.data.txt OV-13-2057-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2057.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2057.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2057.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2057.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-13-2057-01A-02D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-13-2057-01A-02D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-13-2057-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2057-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2057-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-13-2057-01A-02D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-2057-01A-02T-1051-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-13-2057-01A-02D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2057-01A-02D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2057-01A-02D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2057-01A-02D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2057-01A-02D-1043-01.seg.txt TCGA-13-2057-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-13-2057-01A-02R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-13-2057-01A-02R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-13-2057-01A-02R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-13-2057-01A-02R-1048-01.data.txt OV-13-2059-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2059.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2059.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2059.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2059.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-13-2059-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-13-2059-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-13-2059-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2059-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2059-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-13-2059-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-2059-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-2059-01A-03-1563-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-13-2059-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2059-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2059-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2059-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2059-01A-01D-1043-01.seg.txt TCGA-13-2059-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-13-2059-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-13-2059-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-13-2059-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-13-2059-01A-01R-1048-01.data.txt OV-13-2060-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-13-2060.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-13-2060.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-13-2060.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-13-2060.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.24.1.0/TCGA-13-2060-01A-01D-0705-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.6.0.0/TCGA-13-2060-01A-01D-0707-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.24.1.0/TCGA-13-2060-01A-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.24.1.0/TCGA-13-2060-01A-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.24.1.0/TCGA-13-2060-01A-01R-0710-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.12.5.0/TCGA-13-2060-01A-01D-0708-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-2060-01A-01T-0712-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-2060-01A-21-1560-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-2060-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-13-2060-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-13-2060-01A-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-13-2060-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-13-2060-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-13-2060-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-13-2060-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-13-2060-01A-01D-0706-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-13-2060-01A-01D-0706-06.seg.txt TCGA-13-2060-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-2060-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-13-2060-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-13-2060-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-13-2060-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-13-2060-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-13-2060-01A-01R-0709-01.data.txt OV-13-2061-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2061.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2061.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2061.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2061.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-13-2061-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-13-2061-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-13-2061-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2061-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2061-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-13-2061-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-2061-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-2061-01A-03-1563-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-13-2061-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2061-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2061-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2061-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2061-01A-01D-1043-01.seg.txt TCGA-13-2061-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-13-2061-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-13-2061-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-13-2061-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-13-2061-01A-01R-1048-01.data.txt OV-13-2065-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2065.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2065.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2065.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2065.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-13-2065-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-13-2065-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-13-2065-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2065-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2065-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-13-2065-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-2065-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-2065-01A-03-1563-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-13-2065-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2065-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2065-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2065-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2065-01A-01D-1043-01.seg.txt TCGA-13-2065-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-13-2065-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-13-2065-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-13-2065-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-13-2065-01A-01R-1048-01.data.txt OV-13-2066-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2066.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2066.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2066.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2066.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-13-2066-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-13-2066-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-13-2066-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2066-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2066-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-13-2066-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-2066-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-13-2066-01A-03-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-13-2066-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2066-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2066-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2066-01A-01D-1043-01.seg.txt TCGA-13-2066-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-13-2066-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-13-2066-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-13-2066-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-13-2066-01A-01R-1048-01.data.txt OV-13-2071-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2071.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-13-2071.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2071.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-13-2071.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-13-2071-01A-02D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-13-2071-01A-02D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-13-2071-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2071-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-13-2071-01A-02R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-13-2071-01A-02D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-13-2071-01A-02T-1051-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-13-2071-01A-02D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2071-01A-02D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2071-01A-02D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2071-01A-02D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-13-2071-01A-02D-1043-01.seg.txt TCGA-13-2071-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-13-2071-01A-02R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-13-2071-01A-02R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-13-2071-01A-02R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-13-2071-01A-02R-1048-01.data.txt OV-20-0987-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-20-0987.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-20-0987.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-20-0987.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-20-0987.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-20-0987-01A-02D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-20-0987-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-20-0987-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-20-0987-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-20-0987-01A-02D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-20-0987-01A-02T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-20-0987-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-20-0987-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-20-0987-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0987-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0987-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0987-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0987-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-20-0987-01A-02D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-20-0987-01A-02D-0430-06.seg.txt TCGA-20-0987-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-20-0987-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-20-0987-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-0987-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-0987-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-20-0987-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-20-0987-01A-02R-0434-01.data.txt OV-20-0990-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-20-0990.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-20-0990.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-20-0990.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-20-0990.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-20-0990-01A-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-20-0990-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-20-0990-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-20-0990-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-20-0990-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-20-0990-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-20-0990-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-20-0990-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-20-0990-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0990-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0990-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0990-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0990-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-20-0990-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-20-0990-01A-01D-0430-06.seg.txt TCGA-20-0990-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-20-0990-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-20-0990-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-0990-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-0990-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-20-0990-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-20-0990-01A-01R-0434-01.data.txt OV-20-0991-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-20-0991.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-20-0991.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-20-0991.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-20-0991.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-20-0991-01A-03D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-20-0991-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-20-0991-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-20-0991-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-20-0991-01A-03D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-20-0991-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-20-0991-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-20-0991-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-20-0991-01A-03D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0991-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0991-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0991-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0991-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-20-0991-01A-03D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-20-0991-01A-03D-0430-06.seg.txt TCGA-20-0991-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-20-0991-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-20-0991-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-0991-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-0991-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-20-0991-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-20-0991-01A-01R-0434-01.data.txt OV-20-0996-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-20-0996.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-20-0996.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-20-0996.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-20-0996.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-20-0996-01A-03D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-20-0996-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-20-0996-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-20-0996-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-20-0996-01A-03D-0432-05.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-20-0996-01A-03D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0996-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0996-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0996-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-20-0996-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-20-0996-01A-03D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-20-0996-01A-03D-0430-06.seg.txt TCGA-20-0996-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-0996-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-0996-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-20-0996-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-20-0996-01A-02R-0434-01.data.txt OV-20-1682-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-20-1682.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-20-1682.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-20-1682.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-20-1682.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-20-1682-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-20-1682-01A-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-20-1682-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-20-1682-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-20-1682-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-20-1682-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-20-1682-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-20-1682-01A-21-1558-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-20-1682-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-20-1682-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-20-1682-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-20-1682-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-20-1682-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-20-1682-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-20-1682-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-20-1682-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-20-1682-01A-01D-0560-06.seg.txt TCGA-20-1682-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-1682-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-1682-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-20-1682-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-20-1682-01A-01R-0564-01.data.txt OV-20-1683-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-20-1683.clin.txt 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TCGA-20-1683-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-1683-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-1683-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-20-1683-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-20-1683-01A-01R-0564-01.data.txt OV-20-1684-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-20-1684.clin.txt 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TCGA-20-1684-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-1684-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-1684-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-20-1684-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-20-1684-01A-01R-0564-01.data.txt OV-20-1685-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-20-1685.clin.txt 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TCGA-20-1685-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-1685-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-1685-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-20-1685-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-20-1685-01A-01R-0564-01.data.txt OV-20-1686-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-20-1686.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-20-1687-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-20-1687-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-20-1687-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-20-1687-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-20-1687-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-20-1687-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-20-1687-01A-01D-0560-06.seg.txt TCGA-20-1687-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-20-1687-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-20-1687-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-20-1687-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-20-1687-01A-01R-0564-01.data.txt OV-23-1021-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1021.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1021.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1021.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1021.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1021-01B-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-23-1021-01B-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1021-01B-01R-0435-03.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1021-01B-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1021-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1021-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1021-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1021-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1021-01B-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1021-01B-01D-0430-06.seg.txt TCGA-23-1021-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1021-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1021-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1021-01B-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1021-01B-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1021-01B-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1021-01B-01R-0434-01.data.txt OV-23-1022-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1022.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1022-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1022-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1022-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1022-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1022-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1022-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1022-01A-02D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1022-01A-02D-0430-06.seg.txt TCGA-23-1022-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1022-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1022-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1022-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1022-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1022-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1022-01A-01R-0434-01.data.txt OV-23-1023-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1023.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1023.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1023.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-23-1023-01R-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.13.5.0/TCGA-23-1023-01R-01D-0807-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1023-01R-01T-0811-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1023-01R-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1023-01R-01R-1564-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1023-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1023-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1023-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.27.2002.0/TCGA-23-1023-01R-01D-0803-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1023-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1023-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1023-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1023-01A-03D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-23-1023-01R-01D-0805-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-23-1023-01R-01D-0805-06.seg.txt TCGA-23-1023-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-23-1023-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-23-1023-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1023-01R-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1023-01R-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.27.1007.0/TCGA-23-1023-01R-01R-0808-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.27.1007.0/TCGA-23-1023-01R-01R-0808-01.data.txt OV-23-1024-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1024.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1024.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1024.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1024.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1024-01A-02D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-23-1024-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1024-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1024-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1024-01A-02D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1024-01A-02T-0438-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1024-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1024-01A-02D-0428-01.seg.txt 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TCGA-23-1024-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-23-1024-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-23-1024-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1024-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1024-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1024-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1024-01A-02R-0434-01.data.txt OV-23-1026-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1026.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1026.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1026.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1026.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1026-01B-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1026-01B-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1026-01B-01R-1569-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1026-01B-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1026-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1026-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1026-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1026-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1026-01B-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1026-01B-01D-0430-06.seg.txt TCGA-23-1026-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-23-1026-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-23-1026-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1026-01B-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1026-01B-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1026-01B-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1026-01B-01R-0434-01.data.txt OV-23-1027-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1027.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1027.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1027.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1027.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1027-01A-02D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-23-1027-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1027-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1027-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1027-01A-02D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1027-01A-02T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1027-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1027-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1027-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1027-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1027-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1027-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1027-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1027-01A-02D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1027-01A-02D-0430-06.seg.txt TCGA-23-1027-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1027-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1027-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1027-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1027-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1027-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1027-01A-02R-0434-01.data.txt OV-23-1028-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1028.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1028.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1028.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1028-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1028-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1028-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1028-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1028-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1028-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1028-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1028-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1028-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1028-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1028-01A-01D-0430-06.seg.txt TCGA-23-1028-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-23-1028-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-23-1028-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1028-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1028-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1028-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1028-01A-01R-0434-01.data.txt OV-23-1029-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-23-1029.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-23-1029.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-23-1029.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-23-1029.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-23-1029-01B-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-23-1029-01B-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-23-1029-01B-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-23-1029-01B-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-23-1029-01B-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-23-1029-01B-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1029-01B-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1029-01B-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1029-01B-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-23-1029-01B-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-23-1029-01B-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-23-1029-01B-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-23-1029-01B-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-23-1029-01B-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-23-1029-01B-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-23-1029-01B-01D-0579-06.seg.txt TCGA-23-1029-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1029-01B-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1029-01B-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-23-1029-01B-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-23-1029-01B-01R-0582-01.data.txt OV-23-1030-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1030.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1030.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1030.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1030.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1030-01A-02D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-23-1030-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1030-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1030-01A-02R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1030-01A-02D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1030-01A-02T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1030-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1030-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1030-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1030-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1030-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1030-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1030-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1030-01A-02D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1030-01A-02D-0430-06.seg.txt TCGA-23-1030-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1030-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1030-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1030-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1030-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1030-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1030-01A-02R-0434-01.data.txt OV-23-1031-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1031.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1031.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1031.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1031.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1031-01A-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-23-1031-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1031-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1031-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1031-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1031-01A-01T-0438-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1031-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1031-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1031-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1031-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1031-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1031-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1031-01A-01D-0430-06.seg.txt TCGA-23-1031-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1031-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1031-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1031-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1031-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1031-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1031-01A-01R-0434-01.data.txt OV-23-1032-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1032.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1032.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1032.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1032.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1032-01A-02T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1032-01A-02R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1032-01A-02R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1032-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1032-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1032-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1032-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1032-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1032-01A-02D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1032-01A-02D-0430-06.seg.txt TCGA-23-1032-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1032-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1032-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1032-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1032-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1032-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1032-01A-02R-0434-01.data.txt OV-23-1107-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1107.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1107.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1107-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1107-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1107-01A-01D-0430-06.seg.txt TCGA-23-1107-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1107-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1107-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1107-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1107-01A-01R-0434-01.data.txt OV-23-1109-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1109.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1109.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1109-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1109-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1109-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1109-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1109-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1109-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1109-01A-01D-0430-06.seg.txt TCGA-23-1109-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1109-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1109-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1109-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1109-01A-01R-0434-01.data.txt OV-23-1110-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1110.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1110.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1110.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1110.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1110-01A-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-23-1110-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1110-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1110-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1110-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1110-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1110-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1110-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-23-1110-01A-11-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1110-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1110-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1110-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1110-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1110-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1110-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1110-01A-01D-0430-06.seg.txt TCGA-23-1110-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1110-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1110-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1110-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1110-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1110-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1110-01A-01R-0434-01.data.txt OV-23-1111-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-23-1111.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-23-1111.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-23-1111.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-23-1111.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-23-1111-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-23-1111-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-23-1111-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-23-1111-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-23-1111-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-23-1111-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1111-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-23-1111-01A-21-1561-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1111-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1111-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-23-1111-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-23-1111-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-23-1111-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-23-1111-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-23-1111-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-23-1111-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-23-1111-01A-01D-0579-06.seg.txt TCGA-23-1111-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1111-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1111-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-23-1111-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-23-1111-01A-01R-0582-01.data.txt OV-23-1113-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1113.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1113.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1113.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1113.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1113-01A-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-23-1113-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1113-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1113-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1113-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1113-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1113-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1113-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1113-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1113-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1113-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1113-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1113-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1113-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1113-01A-01D-0430-06.seg.txt TCGA-23-1113-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1113-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1113-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1113-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1113-01A-01R-0434-01.data.txt OV-23-1114-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-23-1114.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-23-1114.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-23-1114.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-23-1114.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-23-1114-01B-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-23-1114-01B-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-23-1114-01B-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-23-1114-01B-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-23-1114-01B-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-23-1114-01B-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1114-01B-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1114-01B-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1114-01B-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-23-1114-01B-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-23-1114-01B-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-23-1114-01B-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-23-1114-01B-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-23-1114-01B-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-23-1114-01B-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-23-1114-01B-01D-0560-06.seg.txt TCGA-23-1114-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1114-01B-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1114-01B-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-23-1114-01B-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-23-1114-01B-01R-0564-01.data.txt OV-23-1116-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1116.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1116.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1116.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1116.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1116-01A-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-23-1116-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1116-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-23-1116-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1116-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1116-01A-01T-0438-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1116-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1116-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1116-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1116-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1116-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1116-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1116-01A-01D-0430-06.seg.txt TCGA-23-1116-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1116-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1116-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1116-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1116-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1116-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1116-01A-01R-0434-01.data.txt OV-23-1117-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1117.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1117.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1117.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1117.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-23-1117-01A-02D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.9.2.0/TCGA-23-1117-01A-02R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-23-1117-01A-02R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-23-1117-01A-02R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1117-01A-02D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1117-01A-02T-0438-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1117-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1117-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1117-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1117-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1117-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1117-01A-02D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1117-01A-02D-0430-06.seg.txt TCGA-23-1117-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1117-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1117-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1117-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1117-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1117-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1117-01A-02R-0434-01.data.txt OV-23-1118-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1118.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1118.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1118.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-23-1118-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1118-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1118-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1118-01A-01R-1564-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1118-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1118-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1118-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1118-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1118-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1118-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1118-01A-01D-0430-06.seg.txt TCGA-23-1118-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1118-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1118-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1118-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1118-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1118-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1118-01A-01R-0434-01.data.txt OV-23-1119-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1119.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1119-01A-02R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1119-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1119-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1119-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1119-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1119-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1119-01A-02D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1119-01A-02D-0430-06.seg.txt TCGA-23-1119-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1119-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1119-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1119-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1119-01A-02R-0434-01.data.txt OV-23-1120-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1120.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1120-01A-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1120-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1120-01A-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1120-01A-02D-0428-01.seg.txt 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TCGA-23-1121-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1121-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1121-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1121-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1121-01A-01R-0434-01.data.txt OV-23-1122-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1122.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1122-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-1122-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1122-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1122-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1122-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1122-01A-01R-0434-01.data.txt OV-23-1123-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1123.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1123.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1123.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1123.clin.txt 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/xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-1123-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-23-1123-01A-11-1562-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1123-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-23-1123-01A-01R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-23-1123-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1123-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1123-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1123-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1123-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-23-1123-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-23-1123-01A-01D-0430-06.seg.txt TCGA-23-1123-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1123-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1123-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1123-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1123-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1123-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1123-01A-01R-0434-01.data.txt OV-23-1124-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1124.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-23-1124.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-23-1124.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1124-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-23-1124-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1124-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-23-1124-01A-01D-0430-06.seg.txt TCGA-23-1124-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1124-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-23-1124-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1124-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1124-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-23-1124-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-23-1124-01A-01R-0434-01.data.txt OV-23-1809-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-23-1809.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-23-1809.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-23-1809.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-23-1809-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-23-1809-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-23-1809-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-23-1809-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-23-1809-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-23-1809-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-23-1809-01A-01D-0560-06.seg.txt TCGA-23-1809-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-1809-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-1809-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-23-1809-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-23-1809-01A-01R-0564-01.data.txt OV-23-2072-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-23-2072.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-23-2072.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-2072-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-2072-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-2072-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-2072-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-23-2072-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-23-2072-01A-01R-0668-01.data.txt OV-23-2077-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-23-2077.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-23-2077.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-23-2077.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-23-2077.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-23-2077-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-23-2077-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-23-2077-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-23-2077-01A-01D-0663-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-2077-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-2077-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-23-2077-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-23-2077-01A-01R-0668-01.data.txt OV-23-2078-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-23-2078.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-23-2078-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-23-2078-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-23-2078-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-23-2078-01A-01D-0665-06.seg.txt TCGA-23-2078-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-2078-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-2078-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-2078-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-2078-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-23-2078-01A-01R-0668-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-2079-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-23-2079-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-2079-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-2079-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-23-2079-01A-01R-0668-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-23-2081-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-23-2081-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-23-2081-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-23-2081-01A-01D-0663-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-23-2084-01A-02R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-23-2084-01A-02R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-23-2084-01A-02R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-23-2084-01A-02R-0668-01.data.txt OV-23-2641-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2641.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-23-2641-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2641-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2641-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-23-2641-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-2641-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-23-2641-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-23-2641-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2641-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2641-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2641-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2641-01A-01D-1043-01.seg.txt TCGA-23-2641-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-23-2641-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-23-2641-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-23-2641-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-23-2641-01A-01R-1048-01.data.txt OV-23-2643-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2643.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2643.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-23-2643.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-23-2643.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-23-2643-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-23-2643-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-23-2643-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2643-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2643-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-23-2643-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-2643-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-23-2643-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-23-2643-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2643-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2643-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2643-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2643-01A-01D-1043-01.seg.txt TCGA-23-2643-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-23-2643-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-23-2643-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-23-2643-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-23-2643-01A-01R-1048-01.data.txt OV-23-2645-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2645.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2645.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-23-2645.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-23-2645.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-23-2645-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-23-2645-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-23-2645-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2645-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2645-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-23-2645-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-2645-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-23-2645-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-23-2645-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2645-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2645-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2645-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2645-01A-01D-1043-01.seg.txt TCGA-23-2645-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-23-2645-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-23-2645-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-23-2645-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-23-2645-01A-01R-1048-01.data.txt OV-23-2647-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2647.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2647.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-23-2647.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-23-2647.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-23-2647-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-23-2647-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-23-2647-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2647-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2647-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-23-2647-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-2647-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-23-2647-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-23-2647-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2647-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2647-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2647-01A-01D-1043-01.seg.txt TCGA-23-2647-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-23-2647-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-23-2647-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-23-2647-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-23-2647-01A-01R-1048-01.data.txt OV-23-2649-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2649.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-23-2649.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-23-2649.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-23-2649.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-23-2649-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-23-2649-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-23-2649-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2649-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-23-2649-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-23-2649-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-23-2649-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-23-2649-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-23-2649-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2649-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2649-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-23-2649-01A-01D-1043-01.seg.txt TCGA-23-2649-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-23-2649-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-23-2649-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-23-2649-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-23-2649-01A-01R-1048-01.data.txt OV-24-0966-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-24-0966.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-24-0966.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-24-0966.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-24-0966.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-24-0966-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-24-0966-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-24-0966-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-24-0966-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-24-0966-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-24-0966-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-0966-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0966-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0966-01A-01R-1564-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-0966-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-24-0966-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-24-0966-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-24-0966-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-24-0966-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-24-0966-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0966-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0966-01A-01D-0401-06.seg.txt TCGA-24-0966-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-0966-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-0966-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-0966-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-0966-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-24-0966-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-24-0966-01A-01R-0404-01.data.txt OV-24-0968-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0968.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0968.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-0968.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-0968.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-24-0968-01A-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-24-0968-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-24-0968-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-24-0968-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-24-0968-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-0968-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0968-01A-01R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0968-01A-01R-1569-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-24-0968-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0968-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0968-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0968-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0968-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0968-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0968-01A-01D-0430-06.seg.txt TCGA-24-0968-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-0968-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-0968-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-0968-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-0968-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-24-0968-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-24-0968-01A-01R-0434-01.data.txt OV-24-0970-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0970.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0970.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-0970.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-0970.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-24-0970-01B-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-24-0970-01B-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-24-0970-01B-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-24-0970-01B-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-24-0970-01B-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-0970-01B-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0970-01B-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0970-01B-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-0970-01B-11-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-24-0970-01B-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0970-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0970-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0970-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0970-01B-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.2.2.0/TCGA-24-0970-01B-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.2.2.0/TCGA-24-0970-01B-01D-0430-06.seg.txt TCGA-24-0970-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-0970-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-0970-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-0970-01B-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-0970-01B-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-24-0970-01B-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-24-0970-01B-01R-0434-01.data.txt OV-24-0975-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0975.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0975.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-0975.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-24-0975-01B-02D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-0975-01A-02T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0975-01A-02R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0975-01A-02R-1565-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-0975-01A-02R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-0975-01A-02R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-0975-01A-02R-1565-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-24-0975-01B-02D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0975-01B-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0975-01B-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0975-01B-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0975-01B-02D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0975-01B-02D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0975-01B-02D-0430-06.seg.txt TCGA-24-0975-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-0975-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-0975-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-0975-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-0975-01A-02R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-24-0975-01A-02R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-24-0975-01A-02R-0434-01.data.txt OV-24-0979-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0979.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0979.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.9.2.0/TCGA-24-0979-01A-01R-0361-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-24-0979-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-0979-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0979-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0979-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-0979-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-24-0979-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0979-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0979-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0979-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0979-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0979-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0979-01A-01D-0430-06.seg.txt TCGA-24-0979-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-0979-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-0979-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-0979-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-0979-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-24-0979-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-24-0979-01A-01R-0434-01.data.txt OV-24-0980-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-24-0980.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.11.32.0/TCGA-24-0980.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-24-0980.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.11.33.0/TCGA-24-0980.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.11.2.0/TCGA-24-0980-01A-01D-0400-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_244a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-244A.Level_3.2.3.0/TCGA-24-0980-01A-01D-0403-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.11.2.0/TCGA-24-0980-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-24-0980-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.11.2.0/TCGA-24-0980-01A-01R-0405-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.2.5.0/TCGA-24-0980-01A-01D-0402-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-0980-01A-01T-0407-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-0980-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.11.2002.0/TCGA-24-0980-01A-01D-0399-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-24-0980-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-24-0980-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-24-0980-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.11.2002.0/TCGA-24-0980-01A-01D-0399-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0980-01A-01D-0401-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0980-01A-01D-0401-06.seg.txt TCGA-24-0980-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-0980-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-0980-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-0980-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-0980-01A-01R-0406-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.11.1007.0/TCGA-24-0980-01A-01R-0404-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.11.1007.0/TCGA-24-0980-01A-01R-0404-01.data.txt OV-24-0982-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0982.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-0982.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-0982.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-0982.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.12.2.0/TCGA-24-0982-01A-01D-0429-04.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.12.2.0/TCGA-24-0982-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-24-0982-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-24-0982-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-24-0982-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-0982-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0982-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-0982-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-0982-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-24-0982-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0982-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0982-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0982-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-0982-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0982-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-0982-01A-01D-0430-06.seg.txt TCGA-24-0982-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-0982-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-0982-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-0982-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-0982-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-24-0982-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-24-0982-01A-01R-0434-01.data.txt OV-24-1103-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-1103.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-1103.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-1103.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-24-1103-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1103-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1103-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1103-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1103-01A-11-1562-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1103-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1103-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1103-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1103-01A-01R-1565-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-24-1103-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1103-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1103-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1103-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1103-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-1103-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-1103-01A-01D-0430-06.seg.txt TCGA-24-1103-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1103-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1103-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1103-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1103-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-24-1103-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-24-1103-01A-01R-0434-01.data.txt OV-24-1104-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-1104.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-24-1104-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.12.2.0/TCGA-24-1104-01A-01R-0435-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-24-1104-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1104-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1104-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1104-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1104-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-24-1104-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1104-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1104-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1104-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1104-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-1104-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-1104-01A-01D-0430-06.seg.txt TCGA-24-1104-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1104-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1104-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1104-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1104-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-24-1104-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-24-1104-01A-01R-0434-01.data.txt OV-24-1105-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-1105.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.12.31.0/TCGA-24-1105.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.12.32.0/TCGA-24-1105.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.3.5.0/TCGA-24-1105-01A-01D-0432-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1105-01A-01T-0438-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1105-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1105-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1105-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.12.2002.0/TCGA-24-1105-01A-01D-0428-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1105-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1105-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1105-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.12.2003.0/TCGA-24-1105-01A-01D-0428-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-1105-01A-01D-0430-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.1.2.0/TCGA-24-1105-01A-01D-0430-06.seg.txt TCGA-24-1105-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1105-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1105-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1105-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1105-01A-01R-0436-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.12.1007.0/TCGA-24-1105-01A-01R-0434-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.12.1007.0/TCGA-24-1105-01A-01R-0434-01.data.txt OV-24-1413-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-24-1413.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-24-1413.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-24-1413.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-24-1413.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.13.2.0/TCGA-24-1413-01A-01D-0457-04.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1417-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1417-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1417-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1417-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1417-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1417-01A-01R-0477-01.data.txt OV-24-1418-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1418.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1418.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-24-1418.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-24-1419-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1419-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1419-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1419-01A-01D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1419-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1419-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1419-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1419-01A-01R-0477-01.data.txt OV-24-1422-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1422.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-24-1422-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1422-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1422-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1422-01A-01D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1422-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1422-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1422-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1422-01A-01R-0477-01.data.txt OV-24-1423-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1423.clin.txt 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TCGA-24-1424-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1424-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1424-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1424-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1424-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1424-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1424-01A-01R-0477-01.data.txt OV-24-1425-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1425.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1425.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-24-1425.clin.txt 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TCGA-24-1425-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1425-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1425-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1425-01A-02R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1425-01A-02R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-24-1425-01A-02R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-24-1425-01A-02R-0502-01.data.txt OV-24-1426-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1426.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1426.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-24-1426.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-24-1426-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1426-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1426-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1426-01A-01D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1427-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1427-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1427-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1427-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1427-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1427-01A-01R-0477-01.data.txt OV-24-1428-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1428.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1428.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-24-1428.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-24-1428-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1428-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1428-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1428-01A-01D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1428-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1428-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1428-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1428-01A-01R-0477-01.data.txt OV-24-1430-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1430.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1430-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-24-1430-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1430-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1430-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1430-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1430-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-24-1430-01A-01D-0474-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.3.1.0/TCGA-24-1430-01A-01D-0474-06.seg.txt TCGA-24-1430-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1430-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1430-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1430-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1430-01A-01R-0477-01.data.txt OV-24-1431-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1431.clin.txt 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TCGA-24-1431-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1431-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1431-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1431-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1431-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1431-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1431-01A-01R-0477-01.data.txt OV-24-1434-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1434.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1434.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-24-1434.clin.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1434-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1434-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1434-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1434-01A-01R-0477-01.data.txt OV-24-1435-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1435.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-24-1435-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1435-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1435-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1435-01A-01D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1435-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1435-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1435-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1435-01A-01R-0477-01.data.txt OV-24-1436-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1436.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1436-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1436-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1436-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1436-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1436-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1436-01A-01R-0477-01.data.txt OV-24-1463-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1463.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1463.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-24-1463.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-24-1463-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1463-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1463-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1463-01A-01D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1463-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1463-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1463-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1463-01A-01R-0477-01.data.txt OV-24-1464-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1464.clin.txt 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TCGA-24-1464-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1464-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1464-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1464-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1464-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1464-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1464-01A-01R-0477-01.data.txt OV-24-1466-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1466.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.14.34.0/TCGA-24-1466.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.14.35.0/TCGA-24-1466.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1466-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.14.2002.0/TCGA-24-1466-01A-01D-0472-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1466-01A-01D-0472-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.14.2003.0/TCGA-24-1466-01A-01D-0472-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1466-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1466-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1466-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1466-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1466-01A-01R-0477-01.data.txt 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TCGA-24-1467-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1467-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1467-01A-01R-0479-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.14.1007.0/TCGA-24-1467-01A-01R-0477-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.14.1007.0/TCGA-24-1467-01A-01R-0477-01.data.txt OV-24-1469-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1469.clin.txt 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TCGA-24-1469-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1469-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1469-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1469-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1469-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-24-1469-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-24-1469-01A-01R-0502-01.data.txt OV-24-1470-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1470.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1470.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-24-1470.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1470-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.15.2002.0/TCGA-24-1470-01A-01D-0497-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1470-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1470-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1470-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1470-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.4.1.0/TCGA-24-1470-01A-01D-0498-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.4.1.0/TCGA-24-1470-01A-01D-0498-06.seg.txt TCGA-24-1470-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1470-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1470-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1470-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1470-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-24-1470-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-24-1470-01A-01R-0502-01.data.txt OV-24-1471-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1471.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1471.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-24-1471.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.15.2.0/TCGA-24-1471-01A-01R-0503-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.6.5.0/TCGA-24-1471-01A-01D-0501-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1471-01A-01T-0505-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1471-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1471-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1471-01A-21-1562-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.15.2002.0/TCGA-24-1471-01A-01D-0497-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1471-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1471-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1471-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1471-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-24-1471-01A-01D-0498-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-24-1471-01A-01D-0498-06.seg.txt TCGA-24-1471-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1471-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1471-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1471-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1471-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-24-1471-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-24-1471-01A-01R-0502-01.data.txt OV-24-1474-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1474.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1474.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-24-1474.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-24-1474.clin.txt 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TCGA-24-1544-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1544-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1544-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1544-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1544-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-24-1544-01A-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-24-1545-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1545-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1545-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1545-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1545-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-24-1545-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-24-1545-01A-01D-0535-06.seg.txt TCGA-24-1545-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1545-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1545-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1545-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1545-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-24-1545-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-24-1545-01A-01R-0538-01.data.txt OV-24-1546-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-24-1546.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1546-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1546-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-24-1546-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-24-1546-01A-01D-0535-06.seg.txt TCGA-24-1546-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1546-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1546-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-24-1546-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-24-1546-01A-01R-0538-01.data.txt OV-24-1548-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-24-1548.clin.txt 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TCGA-24-1556-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1556-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1556-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1556-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1556-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-24-1556-01A-01R-0538-01.data.txt 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TCGA-24-1558-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1558-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1558-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1558-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1558-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-24-1558-01A-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-24-1560-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1560-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1560-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1560-01A-01D-0533-01.seg.txt 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TCGA-24-1564-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1564-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1564-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1564-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1564-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-24-1564-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-24-1564-01A-01R-0502-01.data.txt OV-24-1565-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1565.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1565.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.15.31.0/TCGA-24-1565.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1565-01A-21-1558-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.15.2002.0/TCGA-24-1565-01A-01D-0497-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1565-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1565-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1565-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1565-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1565-01A-01D-0498-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1565-01A-01D-0498-06.seg.txt TCGA-24-1565-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1565-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1565-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1565-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1565-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-24-1565-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-24-1565-01A-01R-0502-01.data.txt OV-24-1567-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-24-1567.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-24-1567.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-24-1567.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-24-1567.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-24-1567-01A-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-24-1567-01A-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-24-1567-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-24-1567-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-24-1567-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-24-1567-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1567-01A-01T-0541-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1567-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1567-01A-01R-1566-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-24-1567-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1567-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1567-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-24-1567-01A-01D-0533-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1567-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1567-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-24-1567-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-24-1567-01A-01R-0538-01.data.txt OV-24-1603-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1603.clin.txt 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TCGA-24-1603-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1603-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-1603-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1603-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1603-01A-01R-0504-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.15.2002.0/TCGA-24-1604-01A-01D-0497-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1604-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1604-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1604-01A-01D-0497-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1614-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1614-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1614-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1614-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1614-01A-01D-0498-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1614-01A-01D-0498-06.seg.txt TCGA-24-1614-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1614-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-24-1614-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1614-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1614-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-24-1614-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-24-1614-01A-01R-0502-01.data.txt OV-24-1616-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1616.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.15.30.0/TCGA-24-1616.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1616-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.15.2002.0/TCGA-24-1616-01A-01D-0497-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-24-1616-01A-01D-0498-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-24-1616-01A-01D-0498-06.seg.txt TCGA-24-1616-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1616-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-24-1616-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1616-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1616-01A-01R-0504-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.15.1007.0/TCGA-24-1616-01A-01R-0502-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.15.1007.0/TCGA-24-1616-01A-01R-0502-01.data.txt OV-24-1842-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1842.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1842.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1842.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1842-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1842-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1842-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1842-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-24-1842-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1842-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1842-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1842-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1842-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-24-1842-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-24-1842-01A-01D-0579-06.seg.txt TCGA-24-1842-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1842-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1842-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-24-1842-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-24-1842-01A-01R-0582-01.data.txt OV-24-1843-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1843.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1843.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-24-1843-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1843-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1843-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1843-01A-01D-0577-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1843-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-24-1843-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-24-1843-01A-01R-0582-01.data.txt OV-24-1844-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1844.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1844.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1844-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1844-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1844-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1844-01A-01D-0579-06.seg.txt TCGA-24-1844-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1844-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1844-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-24-1844-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-24-1844-01A-01R-0582-01.data.txt OV-24-1845-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1845.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1845.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1845.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1845.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-24-1845-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-24-1845-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-24-1845-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-24-1845-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-24-1845-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-24-1845-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1845-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1845-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1845-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1845-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-24-1845-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1845-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1845-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1845-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1845-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1845-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1845-01A-01D-0579-06.seg.txt TCGA-24-1845-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1845-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1845-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-24-1845-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-24-1845-01A-01R-0582-01.data.txt OV-24-1846-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1846.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1846.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1846.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1846.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-24-1846-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1846-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1846-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1846-01A-01R-1567-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1846-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1846-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1846-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1846-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-24-1846-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1846-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1846-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1846-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1846-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1846-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1846-01A-01D-0579-06.seg.txt TCGA-24-1846-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1846-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1846-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-24-1846-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-24-1846-01A-01R-0582-01.data.txt OV-24-1847-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-24-1847.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-24-1847.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-24-1847.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-24-1847.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-24-1847-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-24-1847-01A-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-24-1847-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-24-1847-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-24-1847-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-24-1847-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1847-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1847-01A-01R-1566-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1847-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1847-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1847-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1847-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-24-1847-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-24-1847-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-24-1847-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-24-1847-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-24-1847-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-24-1847-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-24-1847-01A-01D-0560-06.seg.txt TCGA-24-1847-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1847-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1847-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-24-1847-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-24-1847-01A-01R-0564-01.data.txt OV-24-1849-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1849.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1849.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1849.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1849.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-24-1849-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-24-1849-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-24-1849-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-24-1849-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-24-1849-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-24-1849-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1849-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1849-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1849-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1849-01A-21-1562-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1849-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1849-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1849-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-24-1849-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1849-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1849-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1849-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1849-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1849-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1849-01A-01D-0579-06.seg.txt TCGA-24-1849-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1849-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1849-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-24-1849-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-24-1849-01A-01R-0582-01.data.txt OV-24-1850-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1850.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-24-1850.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1850.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-24-1850.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-24-1850-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-24-1850-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-24-1850-01A-01R-0583-03.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1850-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1850-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1850-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1850-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1850-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-24-1850-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1850-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1850-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1850-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-24-1850-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1850-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-24-1850-01A-01D-0579-06.seg.txt TCGA-24-1850-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1850-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1850-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-24-1850-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-24-1850-01A-01R-0582-01.data.txt OV-24-1852-TP /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.27.1.0/TCGA-24-1852-01A-01D-0804-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.7.0.0/TCGA-24-1852-01A-01D-0806-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.27.0.0/TCGA-24-1852-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-24-1852-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-24-1852-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.13.5.0/TCGA-24-1852-01A-01D-0807-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1852-01A-01T-0811-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1852-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.27.2002.0/TCGA-24-1852-01A-01D-0803-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-24-1852-01A-01D-0803-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-24-1852-01A-01D-0803-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-24-1852-01A-01D-0803-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-24-1852-01A-01D-0803-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-24-1852-01A-01D-0805-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-24-1852-01A-01D-0805-06.seg.txt TCGA-24-1852-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1852-01A-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1852-01A-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.27.1007.0/TCGA-24-1852-01A-01R-0808-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.27.1007.0/TCGA-24-1852-01A-01R-0808-01.data.txt OV-24-1920-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1920.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1920.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1920.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1920.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-24-1920-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-24-1920-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-24-1920-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1920-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1920-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-24-1920-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1920-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1920-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1920-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1920-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-24-1920-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1920-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1920-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1920-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1920-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-1920-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-1920-01A-01D-0650-06.seg.txt TCGA-24-1920-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1920-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1920-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-1920-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-1920-01A-01R-0653-01.data.txt OV-24-1923-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1923.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1923.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1923.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1923.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-24-1923-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-24-1923-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-24-1923-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1923-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1923-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-24-1923-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1923-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1923-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1923-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1923-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-24-1923-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1923-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1923-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1923-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1923-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-1923-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-1923-01A-01D-0650-06.seg.txt TCGA-24-1923-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1923-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1923-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-1923-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-1923-01A-01R-0653-01.data.txt OV-24-1924-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1924.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1924.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1924.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1924.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-24-1924-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-24-1924-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-24-1924-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1924-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1924-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-24-1924-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1924-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1924-01A-21-1559-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1924-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-1924-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-24-1924-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1924-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1924-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1924-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1924-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-1924-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-1924-01A-01D-0650-06.seg.txt TCGA-24-1924-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1924-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1924-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-1924-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-1924-01A-01R-0653-01.data.txt OV-24-1927-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1927.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1927.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1927.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1927.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-24-1927-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-24-1927-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-24-1927-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1927-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1927-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-24-1927-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1927-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-1927-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-24-1927-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1927-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1927-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1927-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1927-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-1927-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-1927-01A-01D-0650-06.seg.txt TCGA-24-1927-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1927-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1927-01A-01R-0655-07.data.txt OV-24-1928-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1928.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1928.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1928.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-1928.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-24-1928-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-24-1928-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-24-1928-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1928-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-1928-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-24-1928-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-1928-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1928-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-1928-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1928-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1928-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-1928-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-24-1928-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-1928-01A-01D-0648-01.seg.txt 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TCGA-24-1928-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1928-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1928-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-1928-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-1928-01A-01R-0653-01.data.txt OV-24-1930-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-1930.clin.txt 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TCGA-24-1930-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-1930-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-1930-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-1930-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-1930-01A-01R-0653-01.data.txt OV-24-2019-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2019.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2019-01A-02D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2019-01A-02D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-24-2019-01A-02D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-24-2019-01A-02D-0665-06.seg.txt TCGA-24-2019-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2019-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2019-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2019-01A-02R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2019-01A-02R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-24-2019-01A-02R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-24-2019-01A-02R-0668-01.data.txt OV-24-2020-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-2020.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-2020.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-2020.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-2020.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-2020-01A-21-1560-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-2020-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-2020-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-24-2020-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2020-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2020-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2020-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2020-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2020-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-24-2020-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2020-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2020-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2020-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2020-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-2020-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-2020-01A-01D-0650-06.seg.txt TCGA-24-2020-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2020-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2020-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-2020-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-2020-01A-01R-0653-01.data.txt OV-24-2023-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-2023.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-2023.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2023-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2023-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-2023-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-2023-01A-01D-0650-06.seg.txt TCGA-24-2023-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2023-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2023-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-2023-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-2023-01A-01R-0653-01.data.txt OV-24-2024-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2024.clin.txt 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TCGA-24-2024-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2024-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2024-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2024-01A-02R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2024-01A-02R-0670-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2027-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2027-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2027-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2027-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-24-2027-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-24-2027-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2027-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2027-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2027-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2027-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-2027-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-2027-01A-01D-0650-06.seg.txt TCGA-24-2027-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2027-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2027-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-2027-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-2027-01A-01R-0653-01.data.txt OV-24-2029-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-2029.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-24-2029.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-2029.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-24-2029.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-24-2029-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-24-2029-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-24-2029-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-2029-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-24-2029-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-24-2029-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-2029-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-2029-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-2029-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-2029-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-24-2029-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2029-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2029-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2029-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-24-2029-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-2029-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-24-2029-01A-01D-0650-06.seg.txt TCGA-24-2029-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2029-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2029-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-24-2029-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-24-2029-01A-01R-0653-01.data.txt OV-24-2030-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2030.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2030.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-24-2030.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-24-2030.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.22.2.0/TCGA-24-2030-01A-01D-0664-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.5.0.0/TCGA-24-2030-01A-01D-0666-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.22.1.0/TCGA-24-2030-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-24-2030-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-24-2030-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.11.5.0/TCGA-24-2030-01A-01D-0667-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-24-2030-01A-01T-0671-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-2030-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-24-2030-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-24-2030-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-24-2030-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2030-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2030-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2030-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2030-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-24-2030-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-24-2030-01A-01D-0665-06.seg.txt TCGA-24-2030-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2030-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2030-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2030-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2030-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-24-2030-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-24-2030-01A-01R-0668-01.data.txt OV-24-2033-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2033.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2033.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-24-2033.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-24-2033.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-24-2033-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2033-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2033-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2033-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2033-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-24-2033-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-24-2033-01A-01D-0665-06.seg.txt TCGA-24-2033-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2033-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2033-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-24-2033-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-24-2033-01A-01R-0668-01.data.txt OV-24-2035-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2035.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2035.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-24-2035-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2035-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2035-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-24-2035-01A-01D-0663-01.seg.txt 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TCGA-24-2036-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2036-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2036-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-24-2036-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-24-2036-01A-01R-0668-01.data.txt OV-24-2038-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-24-2038.clin.txt 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TCGA-24-2267-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2267-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2267-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2267-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2267-01A-01R-0711-07.data.txt 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TCGA-24-2280-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2280-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2280-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2280-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2280-01A-01R-0711-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2295-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2295-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-24-2295-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-24-2295-01A-01R-0709-01.data.txt OV-24-2297-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-24-2297.clin.txt 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TCGA-24-2297-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2297-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2297-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-24-2297-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-24-2297-01A-01R-0709-01.data.txt OV-24-2298-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-24-2298.clin.txt 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TCGA-24-2298-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2298-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-24-2298-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-24-2298-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-24-2298-01A-01R-0711-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1314-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1314-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-25-1314-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-25-1314-01A-01R-0453-01.data.txt OV-25-1315-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-25-1315.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-25-1315-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-25-1315-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1315-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1315-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-25-1315-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-25-1315-01A-01R-0453-01.data.txt OV-25-1316-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-25-1316.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-25-1316.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-25-1316.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.13.2002.0/TCGA-25-1317-01A-01D-0452-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-25-1317-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-25-1317-01A-01D-0452-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.13.2002.0/TCGA-25-1317-01A-01D-0452-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1317-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1317-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-25-1317-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-25-1317-01A-01R-0453-01.data.txt OV-25-1318-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-25-1318.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1318-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1318-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1318-01A-01R-1565-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1318-01A-01R-1565-13.data.txt 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TCGA-25-1319-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-25-1319-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-25-1319-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1319-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1319-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-25-1319-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-25-1319-01A-01R-0453-01.data.txt OV-25-1320-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-25-1320.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-25-1320.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-25-1320.clin.txt 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TCGA-25-1322-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Coverage_Calculation__wig/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-25-1322-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__genome_wustl_edu__Level_2__Mutation_Calling__maf/genome.wustl.edu_OV.IlluminaGA_DNASeq.Level_2.2.5.0/TCGA-25-1322-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1322-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1322-01A-01R-0456-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.13.1007.0/TCGA-25-1322-01A-01R-0453-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.13.1007.0/TCGA-25-1322-01A-01R-0453-01.data.txt OV-25-1323-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-25-1323.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.13.31.0/TCGA-25-1323.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.13.32.0/TCGA-25-1323.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-25-1623-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1623-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1623-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1623-01A-01D-0533-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1623-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1623-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-25-1623-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-25-1623-01A-01R-0538-01.data.txt OV-25-1625-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-25-1625.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-25-1625-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-25-1625-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-25-1625-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-25-1625-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-25-1625-01A-01T-0541-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-25-1625-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1625-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1625-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1625-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1625-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1625-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-25-1625-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1625-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1625-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1625-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1625-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-25-1625-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-25-1625-01A-01D-0535-06.seg.txt TCGA-25-1625-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1625-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1625-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1625-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1625-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-25-1625-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-25-1625-01A-01R-0538-01.data.txt OV-25-1626-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-25-1626.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-25-1626.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-25-1626.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-25-1626.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-25-1626-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-25-1626-01A-01T-0541-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-25-1626-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-25-1626-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-25-1626-01A-21-1558-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-25-1626-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-25-1626-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-25-1626-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-25-1626-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1626-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1626-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1626-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1626-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-25-1626-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-25-1626-01A-01D-0535-06.seg.txt TCGA-25-1626-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1626-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1626-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1626-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1626-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-25-1626-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-25-1626-01A-01R-0538-01.data.txt OV-25-1627-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-25-1627.clin.txt 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TCGA-25-1627-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1627-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1627-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1627-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1627-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-25-1627-01A-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-25-1628-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1628-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1628-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-25-1628-01A-01D-0533-01.seg.txt 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TCGA-25-1630-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1630-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1630-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1630-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1630-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-25-1630-01A-01R-0538-01.data.txt 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TCGA-25-1632-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1632-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1632-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1632-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1632-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-25-1632-01A-01R-0538-01.data.txt 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TCGA-25-1635-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1635-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-25-1635-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1635-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1635-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-25-1635-01A-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1870-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1870-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1870-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1870-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-25-1870-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-25-1870-01A-01D-0650-06.seg.txt TCGA-25-1870-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1870-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1870-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-25-1870-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-25-1870-01A-01R-0653-01.data.txt OV-25-1871-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-25-1871.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-25-1871.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-25-1871.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-25-1871.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-25-1871-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-25-1871-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-25-1871-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-25-1871-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-25-1871-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-25-1871-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-25-1871-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1871-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-25-1871-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-25-1871-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1871-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1871-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1871-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1871-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-25-1871-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-25-1871-01A-01D-0650-06.seg.txt TCGA-25-1871-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1871-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1871-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-25-1871-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-25-1871-01A-01R-0653-01.data.txt OV-25-1877-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-25-1877.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-25-1877.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-25-1877.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-25-1877.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-25-1877-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-25-1877-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-25-1877-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-25-1877-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-25-1877-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-25-1877-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-25-1877-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-25-1877-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-25-1877-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-25-1877-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1877-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1877-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1877-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1877-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-25-1877-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-25-1877-01A-01D-0650-06.seg.txt TCGA-25-1877-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1877-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1877-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-25-1877-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-25-1877-01A-01R-0653-01.data.txt OV-25-1878-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-25-1878.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-25-1878.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-25-1878.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-25-1878.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-25-1878-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-25-1878-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-25-1878-01A-01R-0654-03.data.txt 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/xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-25-1878-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-25-1878-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-25-1878-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-25-1878-01A-01D-0648-01.seg.txt 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TCGA-25-1878-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-1878-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-1878-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-25-1878-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-25-1878-01A-01R-0653-01.data.txt OV-25-2042-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-25-2042.clin.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-25-2042-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-25-2042-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-2042-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-2042-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-25-2042-01A-01R-0709-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-2390-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-2390-01A-01R-0711-07.data.txt OV-25-2391-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-25-2391.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-25-2391.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.24.25.0/TCGA-25-2391.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-25-2391-01A-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-25-2391-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-25-2391-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-25-2391-01A-01D-0704-01.seg.txt 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TCGA-25-2396-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-25-2396-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-25-2396-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-2396-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-2396-01A-01R-0711-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.24.2002.0/TCGA-25-2404-01A-01D-0704-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-25-2404-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-25-2404-01A-01D-0704-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.24.2002.0/TCGA-25-2404-01A-01D-0704-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-25-2409-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-25-2409-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-25-2409-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-25-2409-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-25-2409-01A-01R-0709-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1690-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1690-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1690-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1690-01A-01R-0564-01.data.txt OV-29-1691-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1691.clin.txt 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TCGA-29-1691-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1691-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1691-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1691-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1691-01A-01R-0564-01.data.txt OV-29-1692-TP /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.27.1.0/TCGA-29-1692-01B-01D-0804-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.7.0.0/TCGA-29-1692-01B-01D-0806-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.27.0.0/TCGA-29-1692-01B-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-29-1692-01B-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-29-1692-01B-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.13.5.0/TCGA-29-1692-01B-01D-0807-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1692-01B-01T-0811-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.27.2002.0/TCGA-29-1692-01B-01D-2069-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-29-1692-01B-01D-2069-01.seg.txt 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TCGA-29-1692-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1692-01B-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1692-01B-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.27.1007.0/TCGA-29-1692-01B-01R-0808-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.27.1007.0/TCGA-29-1692-01B-01R-0808-01.data.txt OV-29-1693-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1693.clin.txt 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TCGA-29-1693-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1693-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1693-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1693-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1693-01A-01R-0564-01.data.txt OV-29-1694-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1694.clin.txt 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TCGA-29-1694-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1694-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1694-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1694-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1694-01A-01R-0564-01.data.txt OV-29-1695-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1695.clin.txt 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TCGA-29-1695-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1695-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1695-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1695-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1695-01A-01R-0564-01.data.txt OV-29-1696-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1696.clin.txt 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TCGA-29-1696-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1696-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1696-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1696-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1696-01A-01R-0564-01.data.txt OV-29-1697-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1697.clin.txt 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TCGA-29-1697-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1697-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1697-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1697-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1697-01A-01R-0564-01.data.txt OV-29-1698-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1698.clin.txt 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TCGA-29-1701-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1701-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1701-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1701-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1701-01A-01R-0564-01.data.txt OV-29-1702-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1702.clin.txt 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TCGA-29-1702-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1702-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1702-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1702-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1702-01A-01R-0564-01.data.txt OV-29-1703-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1703.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1703-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1703-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1703-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1703-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1703-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1703-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1703-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1703-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1703-01A-01D-0560-06.seg.txt TCGA-29-1703-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1703-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1703-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1703-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1703-01A-01R-0564-01.data.txt OV-29-1704-TP /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.27.1.0/TCGA-29-1704-01B-01D-0804-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.7.0.0/TCGA-29-1704-01B-01D-0806-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.27.0.0/TCGA-29-1704-01B-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-29-1704-01B-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-29-1704-01B-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.13.5.0/TCGA-29-1704-01B-01D-0807-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1704-01B-01T-0811-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.27.2002.0/TCGA-29-1704-01B-01D-0803-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-29-1704-01B-01D-0803-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-29-1704-01B-01D-0803-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-29-1704-01B-01D-0803-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.27.2002.0/TCGA-29-1704-01B-01D-0803-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-29-1704-01B-01D-0805-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-29-1704-01B-01D-0805-06.seg.txt TCGA-29-1704-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1704-01B-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1704-01B-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.27.1007.0/TCGA-29-1704-01B-01R-0808-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.27.1007.0/TCGA-29-1704-01B-01R-0808-01.data.txt OV-29-1705-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1705.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1705.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1705.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1705.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-29-1705-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-29-1705-01A-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-29-1705-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1705-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1705-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1705-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1705-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1705-01A-21-1558-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1705-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1705-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1705-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1705-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1705-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1705-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1705-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1705-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1705-01A-01D-0560-06.seg.txt TCGA-29-1705-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1705-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1705-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1705-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1705-01A-01R-0564-01.data.txt OV-29-1707-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1707.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1707.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1707.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1707.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-29-1707-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-29-1707-01A-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-29-1707-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1707-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1707-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1707-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1707-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1707-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1707-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1707-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1707-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1707-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1707-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1707-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1707-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1707-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1707-01A-01D-0560-06.seg.txt TCGA-29-1707-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1707-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1707-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1707-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1707-01A-01R-0564-01.data.txt OV-29-1710-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1710.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1710.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1710.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1710.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-29-1710-01A-02D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-29-1710-01A-02D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-29-1710-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1710-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1710-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1710-01A-02D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1710-01A-02T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1710-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1710-01A-02R-1567-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1710-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1710-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1710-01A-02R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1710-01A-02D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1710-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1710-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1710-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1710-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1710-01A-02D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1710-01A-02D-0560-06.seg.txt TCGA-29-1710-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1710-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1710-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1710-01A-02R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1710-01A-02R-0564-01.data.txt OV-29-1711-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1711.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1711.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1711.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1711.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1711-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1711-01A-01T-0604-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1711-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1711-01A-01R-1567-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1711-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1711-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1711-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1711-01A-01D-0559-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1761-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1761-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1761-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1761-01A-01R-0564-01.data.txt OV-29-1762-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1762.clin.txt 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TCGA-29-1762-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1762-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1762-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1762-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1762-01A-01R-0564-01.data.txt OV-29-1763-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1763.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1763-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1763-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1763-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1763-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1763-01A-02R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1763-01A-02D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1763-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1763-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1763-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1763-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1763-01A-02D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1763-01A-02D-0560-06.seg.txt TCGA-29-1763-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1763-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1763-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1763-01A-02R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1763-01A-02R-0564-01.data.txt OV-29-1764-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1764.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-29-1764-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1764-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1764-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1764-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1764-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1764-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1764-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1764-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1764-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1764-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1764-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1764-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1764-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1764-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1764-01A-01D-0560-06.seg.txt TCGA-29-1764-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1764-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1764-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1764-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1764-01A-01R-0564-01.data.txt OV-29-1766-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1766.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1766.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1766.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1766.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-29-1766-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-29-1766-01A-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-29-1766-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1766-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1766-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1766-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1766-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1766-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1766-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1766-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1766-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1766-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1766-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1766-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1766-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1766-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1766-01A-01D-0560-06.seg.txt TCGA-29-1766-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1766-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1766-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1766-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1766-01A-01R-0564-01.data.txt OV-29-1768-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1768.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1768.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1768.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1768.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-29-1768-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-29-1768-01A-01D-0603-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-29-1768-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1768-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1768-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1768-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1768-01A-01T-0604-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1768-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1768-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1768-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1768-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1768-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1768-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1768-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1768-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1768-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1768-01A-01D-0560-06.seg.txt TCGA-29-1768-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1768-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1768-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1768-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1768-01A-01R-0564-01.data.txt OV-29-1769-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1769.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1769.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-29-1769.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-29-1769.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-29-1769-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-29-1769-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-29-1769-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1769-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1769-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-29-1769-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1769-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1769-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1769-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1769-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-29-1769-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1769-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1769-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1769-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1769-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1769-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1769-01A-01D-0579-06.seg.txt TCGA-29-1769-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1769-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1769-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-29-1769-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-29-1769-01A-01R-0582-01.data.txt OV-29-1770-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1770.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1770.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1770.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1770.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-29-1770-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-29-1770-01A-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-29-1770-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1770-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1770-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1770-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1770-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1770-01A-21-1559-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1770-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1770-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1770-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1770-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1770-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1770-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1770-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1770-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1770-01A-01D-0560-06.seg.txt TCGA-29-1770-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1770-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1770-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1770-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1770-01A-01R-0564-01.data.txt OV-29-1771-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1771.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1771.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1771.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-29-1771.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-29-1771-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-29-1771-01A-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-29-1771-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1771-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-29-1771-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-29-1771-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1771-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1771-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1771-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1771-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-29-1771-01A-01D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1771-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1771-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1771-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1771-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1771-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1771-01A-01D-0560-06.seg.txt TCGA-29-1771-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1771-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1771-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1771-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1771-01A-01R-0564-01.data.txt OV-29-1774-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1774.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1774.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-29-1774.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-29-1774.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-29-1774-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-29-1774-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-29-1774-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1774-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1774-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-29-1774-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1774-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1774-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1774-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1774-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-29-1774-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1774-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1774-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1774-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1774-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1774-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1774-01A-01D-0579-06.seg.txt TCGA-29-1774-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1774-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1774-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-29-1774-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-29-1774-01A-01R-0582-01.data.txt OV-29-1775-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1775.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1775.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-29-1775.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-29-1775.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-29-1775-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-29-1775-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-29-1775-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1775-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1775-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-29-1775-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1775-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1775-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-29-1775-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1775-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1775-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1775-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1775-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1775-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1775-01A-01D-0579-06.seg.txt TCGA-29-1775-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1775-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1775-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-29-1775-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-29-1775-01A-01R-0582-01.data.txt OV-29-1776-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1776.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-29-1776-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1776-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1776-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-29-1776-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1776-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1776-01A-21-1559-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1776-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-29-1776-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-29-1776-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1776-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1776-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1776-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1776-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1776-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1776-01A-01D-0579-06.seg.txt TCGA-29-1776-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1776-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1776-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-29-1776-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-29-1776-01A-01R-0582-01.data.txt OV-29-1777-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1777.clin.txt 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/xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-29-1777-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1777-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-29-1777-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-29-1777-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-1777-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1777-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-29-1777-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-1777-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-29-1777-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1777-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1777-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1777-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-29-1777-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1777-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-29-1777-01A-01D-0579-06.seg.txt TCGA-29-1777-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1777-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1777-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-29-1777-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-29-1777-01A-01R-0582-01.data.txt OV-29-1778-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1778.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-29-1778.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-29-1778.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-29-1778.clin.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1781-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1781-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1781-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1781-01A-01R-0564-01.data.txt OV-29-1783-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1783.clin.txt 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TCGA-29-1783-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1783-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1783-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1783-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1783-01A-01R-0564-01.data.txt OV-29-1784-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1784.clin.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1784-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1784-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1784-01A-02R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1784-01A-02R-0564-01.data.txt OV-29-1785-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-29-1785.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1785-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1785-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-29-1785-01A-01D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1785-01A-01D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-29-1785-01A-01D-0560-06.seg.txt TCGA-29-1785-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-1785-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-1785-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-29-1785-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-29-1785-01A-01R-0564-01.data.txt OV-29-2414-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-29-2414.clin.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-2414-01A-02R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-2414-01A-02R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-29-2414-01A-02R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-29-2414-01A-02R-0709-01.data.txt OV-29-2425-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-29-2425.clin.txt 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TCGA-29-2425-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-2425-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-2425-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-29-2425-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-29-2425-01A-01R-0709-01.data.txt OV-29-2427-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-29-2427.clin.txt 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TCGA-29-2427-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-29-2427-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-29-2427-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-29-2427-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-2427-01A-01R-0711-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-29-2428-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-29-2428-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-29-2428-01A-01R-0709-01.data.txt OV-29-2429-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2429.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2429.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2429.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2429.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-29-2429-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-29-2429-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-29-2429-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2429-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2429-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-29-2429-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-2429-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-2429-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-29-2429-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2429-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2429-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2429-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2429-01A-01D-1043-01.seg.txt TCGA-29-2429-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-29-2429-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-29-2429-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-29-2429-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-29-2429-01A-01R-1048-01.data.txt OV-29-2431-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2431.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2431.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2431.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2431.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-29-2431-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-29-2431-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-29-2431-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2431-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2431-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-29-2431-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-2431-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-2431-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-29-2431-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2431-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2431-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2431-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2431-01A-01D-1043-01.seg.txt TCGA-29-2431-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-29-2431-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-29-2431-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-29-2431-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-29-2431-01A-01R-1048-01.data.txt OV-29-2432-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2432.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2432.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2432.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2432.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-29-2432-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-29-2432-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-29-2432-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2432-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2432-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-29-2432-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-2432-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-2432-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-29-2432-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2432-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2432-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2432-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2432-01A-01D-1043-01.seg.txt TCGA-29-2432-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-29-2432-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-29-2432-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-29-2432-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-29-2432-01A-01R-1048-01.data.txt OV-29-2433-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2433.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2433.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2433.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2433.clin.txt TP TCGA-29-2433 OV-29-2434-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2434.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2434.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2434.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2434.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-29-2434-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-29-2434-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-29-2434-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2434-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2434-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-29-2434-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-2434-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-2434-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-29-2434-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2434-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2434-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2434-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2434-01A-01D-1043-01.seg.txt TCGA-29-2434-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-29-2434-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-29-2434-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-29-2434-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-29-2434-01A-01R-1048-01.data.txt OV-29-2435-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2435.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2435.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2435.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2435.clin.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-2435-01A-21-1560-20.data.txt TP TCGA-29-2435 OV-29-2436-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2436.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-29-2436.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2436.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-29-2436.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-29-2436-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-29-2436-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-29-2436-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2436-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-29-2436-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-29-2436-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-29-2436-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-29-2436-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-29-2436-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2436-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2436-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2436-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-29-2436-01A-01D-1043-01.seg.txt TCGA-29-2436-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-29-2436-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-29-2436-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-29-2436-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-29-2436-01A-01R-1048-01.data.txt OV-30-1714-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-30-1714.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-30-1714.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-30-1714.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-30-1714.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-30-1714-01A-02D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-30-1714-01A-02D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-30-1714-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-30-1714-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-30-1714-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-30-1714-01A-02D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-30-1714-01A-02T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1714-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1714-01A-02R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-30-1714-01A-02D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-30-1714-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-30-1714-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-30-1714-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-30-1714-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-30-1714-01A-02D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-30-1714-01A-02D-0560-06.seg.txt TCGA-30-1714-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1714-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1714-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-30-1714-01A-02R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-30-1714-01A-02R-0564-01.data.txt OV-30-1718-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-30-1718.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-30-1718.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-30-1718.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-30-1718.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-30-1718-01A-01D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-30-1718-01A-01D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-30-1718-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-30-1718-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-30-1718-01A-01R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-30-1718-01A-01D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-30-1718-01A-01T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1718-01A-01R-1567-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1718-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1718-01A-01R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-30-1718-01A-01R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-30-1718-01A-01R-0564-01.data.txt OV-30-1853-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1853.clin.txt 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TCGA-30-1853-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-30-1853-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-30-1853-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1853-01A-02R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1853-01A-02R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1853-01A-02R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1853-01A-02R-0653-01.data.txt OV-30-1855-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-30-1855.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-30-1855.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-30-1855.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-30-1855-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1855-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1855-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1855-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1855-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-30-1855-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-30-1855-01A-01D-0579-06.seg.txt TCGA-30-1855-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1855-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1855-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-30-1855-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-30-1855-01A-01R-0582-01.data.txt OV-30-1856-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-30-1856.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-30-1856.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-30-1856.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-30-1856.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-30-1856-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-30-1856-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-30-1856-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-30-1856-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-30-1856-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-30-1856-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-30-1856-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1856-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1856-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-30-1856-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-30-1856-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1856-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1856-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1856-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1856-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-30-1856-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-30-1856-01A-01D-0579-06.seg.txt TCGA-30-1856-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1856-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1856-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-30-1856-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-30-1856-01A-01R-0582-01.data.txt OV-30-1857-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-30-1857.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-30-1857.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-30-1857.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-30-1857.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-30-1857-01A-02D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-30-1857-01A-02D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-30-1857-01A-02R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-30-1857-01A-02R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-30-1857-01A-02R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-30-1857-01A-02D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-30-1857-01A-02T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1857-01A-02R-1569-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1857-01A-02R-1569-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-30-1857-01A-02D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1857-01A-02D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1857-01A-02D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1857-01A-02D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-30-1857-01A-02D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-30-1857-01A-02D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-30-1857-01A-02D-0579-06.seg.txt TCGA-30-1857-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1857-01A-02R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1857-01A-02R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-30-1857-01A-02R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-30-1857-01A-02R-0582-01.data.txt OV-30-1859-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1859.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1859.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-30-1859.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-30-1859.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-30-1859-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-30-1859-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-30-1859-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-30-1859-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-30-1859-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-30-1859-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-30-1859-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1859-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-30-1859-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-30-1859-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-30-1859-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1859-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1859-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1859-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1859-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-30-1859-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-30-1859-01A-01D-0650-06.seg.txt TCGA-30-1859-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1859-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1859-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1859-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1859-01A-01R-0653-01.data.txt OV-30-1860-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1860.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1860.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-30-1860.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-30-1860.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-30-1860-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1860-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1860-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1860-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1860-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-30-1860-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-30-1860-01A-01D-0650-06.seg.txt TCGA-30-1860-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1860-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1860-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1860-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1860-01A-01R-0653-01.data.txt OV-30-1861-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1861.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1861.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-30-1861-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1861-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1861-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1861-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1861-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-30-1861-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-30-1861-01A-01D-0650-06.seg.txt TCGA-30-1861-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1861-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1861-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1861-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1861-01A-01R-0653-01.data.txt OV-30-1862-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1862.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1862.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-30-1862-01A-02D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1862-01A-02D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1862-01A-02D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1862-01A-02D-0648-01.seg.txt 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TCGA-30-1866-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1866-01A-02R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1866-01A-02R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1866-01A-02R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1866-01A-02R-0653-01.data.txt OV-30-1867-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1867.clin.txt 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TCGA-30-1867-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1867-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1867-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1867-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1867-01A-01R-0653-01.data.txt OV-30-1869-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1869.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-30-1869-01A-21-1559-20.data.txt TP TCGA-30-1869-01 OV-30-1880-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1880.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1880.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-30-1880.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-30-1880.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-30-1880-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1880-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1880-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1880-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-30-1880-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-30-1880-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-30-1880-01A-01D-0650-06.seg.txt TCGA-30-1880-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1880-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1880-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1880-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1880-01A-01R-0653-01.data.txt OV-30-1887-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1887.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1887.clin.txt 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TCGA-30-1887-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1887-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1887-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1887-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1887-01A-01R-0653-01.data.txt OV-30-1891-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-30-1891.clin.txt 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TCGA-30-1891-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-30-1891-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-30-1891-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1891-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1891-01A-01R-0655-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-30-1892-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-30-1892-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-30-1892-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-30-1892-01A-01R-0653-01.data.txt OV-31-1944-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1944.clin.txt 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TCGA-31-1944-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-31-1944-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-31-1944-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-31-1944-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-31-1944-01A-01R-0653-01.data.txt OV-31-1946-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1946.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1946-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1946-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-31-1946-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-31-1946-01A-01D-0650-06.seg.txt TCGA-31-1946-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-31-1946-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-31-1946-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-31-1946-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-31-1946-01A-01R-0653-01.data.txt OV-31-1950-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1950.clin.txt 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TCGA-31-1950-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-31-1950-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-31-1950-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-31-1950-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-31-1950-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-31-1950-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-31-1950-01A-01R-0653-01.data.txt OV-31-1951-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1951.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1951.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-31-1951.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-31-1951-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1951-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1951-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1951-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1951-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-31-1951-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-31-1951-01A-01D-0650-06.seg.txt TCGA-31-1951-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-31-1951-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-31-1951-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-31-1951-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-31-1951-01A-01R-0653-01.data.txt OV-31-1953-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1953.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1953.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-31-1953-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1953-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1953-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1953-01A-01D-0648-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-31-1953-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-31-1953-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-31-1953-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-31-1953-01A-01R-0653-01.data.txt OV-31-1955-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1955.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1955.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-31-1955.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-31-1955.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-31-1955-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-31-1955-01A-01D-0651-02.seg.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-31-1955-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-31-1955-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1955-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1955-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1955-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1955-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-31-1955-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-31-1955-01A-01D-0650-06.seg.txt TCGA-31-1955-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-31-1955-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-31-1955-01A-01R-0655-07.data.txt OV-31-1956-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1956.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1956.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-31-1956.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-31-1956.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-31-1956-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-31-1956-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-31-1956-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-31-1956-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-31-1956-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-31-1956-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-31-1956-01A-01T-0719-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-31-1956-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-31-1956-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-31-1956-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1956-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1956-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1956-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1956-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-31-1956-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-31-1956-01A-01D-0650-06.seg.txt TCGA-31-1956-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-31-1956-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-31-1956-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-31-1956-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-31-1956-01A-01R-0653-01.data.txt OV-31-1959-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1959.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-31-1959.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-31-1959.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-31-1959.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-31-1959-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-31-1959-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-31-1959-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-31-1959-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-31-1959-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-31-1959-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-31-1959-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-31-1959-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-31-1959-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-31-1959-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-31-1959-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-31-1959-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-31-1959-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1959-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1959-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1959-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-31-1959-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-31-1959-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-31-1959-01A-01D-0650-06.seg.txt TCGA-31-1959-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-31-1959-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-31-1959-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-31-1959-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-31-1959-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-31-1959-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-31-1959-01A-01R-0653-01.data.txt OV-36-1568-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-36-1568.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-36-1568.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-36-1568.clin.txt 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TCGA-36-1570-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-36-1570-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-36-1570-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-36-1570-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-36-1570-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-36-1570-01A-01R-0538-01.data.txt 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TCGA-36-1575-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-36-1575-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-36-1575-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-36-1575-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-36-1575-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-36-1575-01A-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-36-1576-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-36-1576-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-36-1576-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-36-1576-01A-01D-0533-01.seg.txt 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TCGA-36-1577-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-36-1577-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-36-1577-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-36-1577-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-36-1577-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-36-1577-01A-01R-0538-01.data.txt 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TCGA-36-1580-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-36-1580-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-36-1580-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-36-1580-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-36-1580-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-36-1580-01A-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2529.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2529.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2529-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2529-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2529-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2529-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2529-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2529-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2529-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2529-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2529-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2529-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2529-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2529-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2529-01A-01D-1043-01.seg.txt TCGA-36-2529-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2529-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2529-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2529-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2529-01A-01R-1048-01.data.txt OV-36-2530-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2530.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2530.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2530.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2530.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2530-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2530-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2530-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2530-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2530-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2530-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2530-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2530-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2530-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2530-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2530-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2530-01A-01D-1043-01.seg.txt TCGA-36-2530-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2530-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2530-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2530-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2530-01A-01R-1048-01.data.txt OV-36-2532-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2532.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2532.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2532.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2532.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2532-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2532-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2532-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2532-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2532-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2532-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2532-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2532-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2532-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2532-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2532-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2532-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2532-01A-01D-1043-01.seg.txt TCGA-36-2532-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2532-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2532-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2532-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2532-01A-01R-1048-01.data.txt OV-36-2533-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2533.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2533.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2533.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2533.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2533-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2533-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2533-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2533-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2533-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2533-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2533-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2533-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2533-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2533-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2533-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2533-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2533-01A-01D-1043-01.seg.txt TCGA-36-2533-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2533-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2533-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2533-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2533-01A-01R-1048-01.data.txt OV-36-2534-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2534.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2534.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2534.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2534.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2534-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2534-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2534-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2534-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2534-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2534-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2534-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2534-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2534-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2534-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2534-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2534-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2534-01A-01D-1043-01.seg.txt TCGA-36-2534-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2534-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2534-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2534-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2534-01A-01R-1048-01.data.txt OV-36-2537-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2537.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2537.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2537.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2537.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2537-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2537-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2537-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2537-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2537-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2537-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2537-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2537-01A-21-1560-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2537-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2537-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2537-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2537-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2537-01A-01D-1043-01.seg.txt TCGA-36-2537-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2537-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2537-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2537-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2537-01A-01R-1048-01.data.txt OV-36-2538-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2538.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2538.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2538.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2538.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2538-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2538-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2538-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2538-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2538-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2538-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2538-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2538-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2538-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2538-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2538-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2538-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2538-01A-01D-1043-01.seg.txt TCGA-36-2538-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2538-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2538-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2538-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2538-01A-01R-1048-01.data.txt OV-36-2539-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2539.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2539.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2539-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2539-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2539-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2539-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2539-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2539-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2539-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2539-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2539-01A-01D-1043-01.seg.txt TCGA-36-2539-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2539-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2539-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2539-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2539-01A-01R-1048-01.data.txt OV-36-2540-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2540.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2540.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2540.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2540.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2540-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2540-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2540-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2540-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2540-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2540-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2540-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2540-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2540-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2540-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2540-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2540-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2540-01A-01D-1043-01.seg.txt TCGA-36-2540-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2540-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2540-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2540-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2540-01A-01R-1048-01.data.txt OV-36-2542-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2542.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2542.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2542.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2542.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2542-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2542-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2542-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2542-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2542-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2542-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2542-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2542-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2542-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2542-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2542-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2542-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2542-01A-01D-1043-01.seg.txt TCGA-36-2542-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2542-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2542-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2542-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2542-01A-01R-1048-01.data.txt OV-36-2543-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2543.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2543.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2543.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2543.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2543-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2543-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2543-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2543-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2543-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2543-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2543-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2543-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2543-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2543-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2543-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2543-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2543-01A-01D-1043-01.seg.txt TCGA-36-2543-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2543-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2543-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2543-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2543-01A-01R-1048-01.data.txt OV-36-2544-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2544.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2544.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2544.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2544.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2544-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2544-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2544-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2544-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2544-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2544-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2544-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2544-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2544-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2544-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2544-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2544-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2544-01A-01D-1043-01.seg.txt TCGA-36-2544-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2544-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2544-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2544-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2544-01A-01R-1048-01.data.txt OV-36-2545-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2545.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2545.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2545.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2545.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2545-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2545-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2545-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2545-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2545-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2545-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2545-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2545-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2545-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2545-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2545-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2545-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2545-01A-01D-1043-01.seg.txt TCGA-36-2545-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2545-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2545-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2545-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2545-01A-01R-1048-01.data.txt OV-36-2547-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2547.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2547.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2547.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2547.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2547-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2547-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2547-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2547-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2547-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2547-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2547-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2547-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2547-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2547-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2547-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2547-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2547-01A-01D-1043-01.seg.txt TCGA-36-2547-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2547-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2547-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2547-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2547-01A-01R-1048-01.data.txt OV-36-2548-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2548.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2548.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2548.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2548.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2548-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2548-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2548-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2548-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2548-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2548-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2548-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2548-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2548-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2548-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2548-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2548-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2548-01A-01D-1043-01.seg.txt TCGA-36-2548-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2548-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2548-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2548-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2548-01A-01R-1048-01.data.txt OV-36-2549-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2549.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2549.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2549.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2549.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2549-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2549-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2549-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2549-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2549-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2549-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2549-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2549-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2549-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2549-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2549-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2549-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2549-01A-01D-1043-01.seg.txt TCGA-36-2549-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2549-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2549-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2549-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2549-01A-01R-1048-01.data.txt OV-36-2551-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2551.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2551.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2551.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2551.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2551-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2551-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2551-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2551-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2551-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2551-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2551-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2551-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2551-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2551-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2551-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2551-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2551-01A-01D-1043-01.seg.txt TCGA-36-2551-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2551-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2551-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2551-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2551-01A-01R-1048-01.data.txt OV-36-2552-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2552.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-36-2552.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2552.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-36-2552.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-36-2552-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-36-2552-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-36-2552-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2552-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-36-2552-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-36-2552-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-36-2552-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-36-2552-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-36-2552-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2552-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2552-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2552-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-36-2552-01A-01D-1043-01.seg.txt TCGA-36-2552-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-36-2552-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-36-2552-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-36-2552-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-36-2552-01A-01R-1048-01.data.txt OV-42-2582-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2582.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2582.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2582.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2582.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-42-2582-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-42-2582-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-42-2582-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2582-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2582-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-42-2582-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-42-2582-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-42-2582-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-42-2582-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2582-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2582-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2582-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2582-01A-01D-1043-01.seg.txt TCGA-42-2582-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-42-2582-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-42-2582-01A-01R-1231-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-42-2582-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-42-2582-01A-01R-1048-01.data.txt OV-42-2587-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2587.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2587.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2587.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2587.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-42-2587-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-42-2587-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-42-2587-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2587-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2587-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-42-2587-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-42-2587-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-42-2587-01A-21-1563-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-42-2587-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2587-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2587-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2587-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2587-01A-01D-1043-01.seg.txt TCGA-42-2587-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-42-2587-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-42-2587-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-42-2587-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-42-2587-01A-01R-1048-01.data.txt OV-42-2588-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2588.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2588.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2588.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2588.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-42-2588-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-42-2588-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-42-2588-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2588-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2588-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-42-2588-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-42-2588-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-42-2588-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-42-2588-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2588-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2588-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2588-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2588-01A-01D-1043-01.seg.txt TCGA-42-2588-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-42-2588-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-42-2588-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-42-2588-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-42-2588-01A-01R-1048-01.data.txt OV-42-2589-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2589.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2589.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2589.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2589.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-42-2589-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-42-2589-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-42-2589-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2589-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2589-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-42-2589-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-42-2589-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-42-2589-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-42-2589-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2589-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2589-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2589-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2589-01A-01D-1043-01.seg.txt TCGA-42-2589-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-42-2589-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-42-2589-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-42-2589-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-42-2589-01A-01R-1048-01.data.txt OV-42-2590-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2590.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2590.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2590.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2590.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-42-2590-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-42-2590-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-42-2590-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2590-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2590-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-42-2590-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-42-2590-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-42-2590-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-42-2590-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2590-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2590-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2590-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2590-01A-01D-1043-01.seg.txt TCGA-42-2590-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-42-2590-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-42-2590-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-42-2590-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-42-2590-01A-01R-1048-01.data.txt OV-42-2591-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2591.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2591.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2591.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2591.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-42-2591-01A-01D-1044-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-42-2591-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-42-2591-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2591-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-42-2591-01A-01R-1049-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-42-2591-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-42-2591-01A-01T-1051-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-42-2591-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-42-2591-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2591-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2591-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2591-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2591-01A-01D-1043-01.seg.txt TCGA-42-2591-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-42-2591-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-42-2591-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-42-2591-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-42-2591-01A-01R-1048-01.data.txt OV-42-2593-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2593.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-42-2593.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2593.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-42-2593.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-42-2593-01A-01D-1046-02.seg.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-42-2593-01A-01D-1047-05.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-42-2593-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-42-2593-01A-01D-1043-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2593-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2593-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2593-01A-01D-1043-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-42-2593-01A-01D-1043-01.seg.txt TCGA-42-2593-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-42-2593-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-42-2593-01A-01R-1050-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-42-2593-01A-01R-1048-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-42-2593-01A-01R-1048-01.data.txt OV-57-1582-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-57-1582.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-57-1582.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-57-1582.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-57-1582.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-57-1582-01A-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-57-1582-01A-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-57-1582-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-57-1582-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-57-1582-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-57-1582-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-57-1582-01A-01T-0541-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1582-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1582-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1582-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1582-01A-01R-1566-13.data.txt 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TCGA-57-1583-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-57-1583-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-57-1583-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-57-1583-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-57-1583-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-57-1583-01A-01R-0538-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1584-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1584-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1584-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-57-1584-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-57-1584-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-57-1584-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-57-1584-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-57-1584-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-57-1584-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-57-1584-01A-01D-0535-06.seg.txt TCGA-57-1584-01 /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-57-1584-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_OV.SOLiD_DNA.Level_2.2.5.0/TCGA-57-1584-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-57-1584-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-57-1584-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-57-1584-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-57-1584-01A-01R-0538-01.data.txt OV-57-1585-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-57-1585.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.17.27.0/TCGA-57-1585.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-57-1585.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.17.28.0/TCGA-57-1585.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.17.2.0/TCGA-57-1585-01A-01D-0534-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.1.4.0/TCGA-57-1585-01A-01D-0537-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.17.2.0/TCGA-57-1585-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-57-1585-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.17.2.0/TCGA-57-1585-01A-01R-0539-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.7.5.0/TCGA-57-1585-01A-01D-0536-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-57-1585-01A-01T-0541-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-57-1585-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-57-1585-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1585-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1585-01A-01R-1566-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1585-01A-01R-1566-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.17.2002.0/TCGA-57-1585-01A-01D-0533-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-57-1585-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-57-1585-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-57-1585-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.17.2002.0/TCGA-57-1585-01A-01D-0533-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-57-1585-01A-01D-0535-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.5.1.0/TCGA-57-1585-01A-01D-0535-06.seg.txt TCGA-57-1585-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-57-1585-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-57-1585-01A-01R-0540-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.17.1007.0/TCGA-57-1585-01A-01R-0538-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.17.1007.0/TCGA-57-1585-01A-01R-0538-01.data.txt OV-57-1586-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-57-1586.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.18.31.0/TCGA-57-1586.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-57-1586.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.18.32.0/TCGA-57-1586.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.18.2.0/TCGA-57-1586-01A-02D-0561-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.2.2.0/TCGA-57-1586-01A-02D-0562-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.18.2.0/TCGA-57-1586-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-57-1586-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.18.2.0/TCGA-57-1586-01A-02R-0565-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.8.5.0/TCGA-57-1586-01A-02D-0563-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-57-1586-01A-02T-0567-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-57-1586-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-57-1586-01A-02R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-57-1586-01A-03-1563-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.18.2002.0/TCGA-57-1586-01A-02D-0559-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-57-1586-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-57-1586-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-57-1586-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.18.2002.0/TCGA-57-1586-01A-02D-0559-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-57-1586-01A-02D-0560-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.6.1.0/TCGA-57-1586-01A-02D-0560-06.seg.txt TCGA-57-1586-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-57-1586-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-57-1586-01A-02R-0566-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.18.1007.0/TCGA-57-1586-01A-02R-0564-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.18.1007.0/TCGA-57-1586-01A-02R-0564-01.data.txt OV-57-1992-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-57-1992.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-57-1992.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-57-1992.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-57-1992.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-57-1992-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-57-1992-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-57-1992-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-57-1992-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-57-1992-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-57-1992-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-57-1992-01A-01T-0656-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-57-1992-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1992-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1992-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1992-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1992-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-57-1992-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-57-1992-01A-01D-0650-06.seg.txt TCGA-57-1992-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-57-1992-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-57-1992-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-57-1992-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-57-1992-01A-01R-0653-01.data.txt OV-57-1993-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-57-1993.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-57-1993.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-57-1993.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-57-1993.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-57-1993-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-57-1993-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-57-1993-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-57-1993-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-57-1993-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-57-1993-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-57-1993-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1993-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1993-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-57-1993-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1993-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1993-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1993-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1993-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-57-1993-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-57-1993-01A-01D-0650-06.seg.txt TCGA-57-1993-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-57-1993-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-57-1993-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-57-1993-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-57-1993-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-57-1993-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-57-1993-01A-01R-0653-01.data.txt OV-57-1994-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-57-1994.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-57-1994.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-57-1994.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-57-1994.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-57-1994-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-57-1994-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-57-1994-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-57-1994-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-57-1994-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-57-1994-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-57-1994-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1994-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-57-1994-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-57-1994-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1994-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1994-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1994-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-57-1994-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-57-1994-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-57-1994-01A-01D-0650-06.seg.txt TCGA-57-1994-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-57-1994-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-57-1994-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-57-1994-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-57-1994-01A-01R-0653-01.data.txt OV-59-2348-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-59-2348.clin.txt 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TCGA-59-2348-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-59-2348-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-59-2348-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-59-2348-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-59-2348-01A-01R-0711-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-59-2349-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-59-2349-01A-01R-0711-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.24.1007.0/TCGA-59-2349-01A-01R-0709-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.24.1007.0/TCGA-59-2349-01A-01R-0709-01.data.txt OV-59-2350-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.24.24.0/TCGA-59-2350.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-61-1721-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1721-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1721-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1721-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1721-01A-01D-0648-01.seg.txt TCGA-61-1721-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1721-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1721-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-61-1721-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-61-1721-01A-01R-0653-01.data.txt OV-61-1722-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1722.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1722.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1722.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1722.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1722-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1722-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1722-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1722-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1722-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1722-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1722-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1722-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1722-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1722-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1722-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1722-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1722-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1722-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1722-01A-01D-0579-06.seg.txt TCGA-61-1722-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1722-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1722-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1722-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1722-01A-01R-0582-01.data.txt OV-61-1724-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1724.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1724.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-61-1724.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-61-1724.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-61-1724-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1724-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1724-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1724-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1724-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1724-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1724-01A-01D-0650-06.seg.txt TCGA-61-1724-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1724-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1724-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-61-1724-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-61-1724-01A-01R-0653-01.data.txt OV-61-1725-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1725.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1725.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1725.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1725.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1725-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1725-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1725-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1725-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1725-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1725-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1725-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1725-01A-01R-1567-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1725-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1725-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1725-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1725-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1725-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1725-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1725-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1725-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1725-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1725-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1725-01A-01D-0579-06.seg.txt TCGA-61-1725-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1725-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1725-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1725-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1725-01A-01R-0582-01.data.txt OV-61-1727-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1727.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1727.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1727.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1727.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1727-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1727-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1727-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1727-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1727-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1727-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1727-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1727-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1727-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1727-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1727-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1727-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1727-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1727-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1727-01A-01D-0579-06.seg.txt TCGA-61-1727-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1727-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1727-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1727-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1727-01A-01R-0582-01.data.txt OV-61-1728-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1728.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1728.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-61-1728.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-61-1728.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-61-1728-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-61-1728-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-61-1728-01A-01R-0654-03.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1728-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1728-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1728-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1728-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-61-1728-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1728-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1728-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1728-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1728-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1728-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1728-01A-01D-0650-06.seg.txt TCGA-61-1728-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1728-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1728-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1728-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1728-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-61-1728-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-61-1728-01A-01R-0653-01.data.txt OV-61-1730-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1730.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1730.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1730.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1730.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1730-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1730-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1730-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1730-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1730-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1730-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1730-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1730-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1730-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1730-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1730-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1730-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1730-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1730-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1730-01A-01D-0579-06.seg.txt TCGA-61-1730-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1730-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1730-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1730-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1730-01A-01R-0582-01.data.txt OV-61-1733-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1733.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1733.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1733.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1733.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1733-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1733-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1733-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1733-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1733-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1733-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1733-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1733-01A-21-1559-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1733-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1733-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1733-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1733-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1733-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1733-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1733-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1733-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1733-01A-01D-0579-06.seg.txt TCGA-61-1733-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1733-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1733-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1733-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1733-01A-01R-0582-01.data.txt OV-61-1734-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-1734.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-1734.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-1734.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-1734.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.22.2.0/TCGA-61-1734-01B-01D-0664-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.5.0.0/TCGA-61-1734-01B-01D-0666-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.22.1.0/TCGA-61-1734-01B-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-1734-01B-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-1734-01B-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.11.5.0/TCGA-61-1734-01B-01D-0667-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1734-01B-01T-0841-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1734-01B-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-61-1734-01B-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1734-01B-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1734-01B-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1734-01B-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1734-01B-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-1734-01B-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-1734-01B-01D-0665-06.seg.txt TCGA-61-1734-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1734-01B-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1734-01B-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-1734-01B-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-1734-01B-01R-0668-01.data.txt OV-61-1736-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-1736.clin.txt 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TCGA-61-1736-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1736-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1736-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1736-01B-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1736-01B-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-1736-01B-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-1736-01B-01R-0668-01.data.txt OV-61-1737-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1737.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1737.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1737.clin.txt 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TCGA-61-1737-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1737-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1737-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1737-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1737-01A-01R-0582-01.data.txt OV-61-1738-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1738.clin.txt 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TCGA-61-1741-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1741-01A-02R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1741-01A-02R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1741-01A-02R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1741-01A-02R-0582-01.data.txt OV-61-1743-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1743.clin.txt 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TCGA-61-1743-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1743-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1743-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-61-1743-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-61-1743-01A-01R-0653-01.data.txt OV-61-1895-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1895.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1895-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1895-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1895-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1895-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1895-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1895-01A-01D-0579-06.seg.txt TCGA-61-1895-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1895-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1895-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1895-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1895-01A-01R-0582-01.data.txt OV-61-1899-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1899.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1899.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1899.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1899.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1899-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1899-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1899-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1899-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1899-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1899-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1899-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1899-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1899-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1899-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1899-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1899-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1899-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1899-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1899-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1899-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1899-01A-01D-0579-06.seg.txt TCGA-61-1899-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1899-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1899-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1899-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1899-01A-01R-0582-01.data.txt OV-61-1900-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1900.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1900.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1900.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1900.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1900-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1900-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1900-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1900-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1900-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1900-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1900-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1900-01A-21-1559-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1900-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1900-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1900-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1900-01A-01D-0577-01.seg.txt 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TCGA-61-1900-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1900-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1900-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1900-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1900-01A-01R-0582-01.data.txt OV-61-1901-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1901.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1901.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1901.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1901.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1901-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1901-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1901-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1901-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1901-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1901-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1901-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1901-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1901-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1901-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1901-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1901-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1901-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1901-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1901-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1901-01A-01D-0579-06.seg.txt TCGA-61-1901-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1901-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1901-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1901-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1901-01A-01R-0582-01.data.txt OV-61-1903-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1903.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1903.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1903.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1903.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1903-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1903-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1903-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1903-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1903-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1903-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1903-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1903-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1903-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1903-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1903-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1903-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1903-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1903-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1903-01A-01D-0579-06.seg.txt TCGA-61-1903-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1903-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1903-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1903-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1903-01A-01R-0582-01.data.txt OV-61-1904-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1904.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1904.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1904.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1904.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1904-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1904-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1904-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1904-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1904-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1904-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1904-01A-01T-0585-07.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1904-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1904-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1904-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1904-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1904-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1904-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1904-01A-01D-0579-06.seg.txt TCGA-61-1904-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1904-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1904-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1904-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1904-01A-01R-0582-01.data.txt OV-61-1906-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1906.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1906.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1906.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1906.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1906-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1906-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1906-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1906-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1906-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1906-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1906-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1906-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1906-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1906-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1906-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1906-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1906-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1906-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1906-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1906-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1906-01A-01D-0579-06.seg.txt TCGA-61-1906-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1906-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1906-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1906-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1906-01A-01R-0582-01.data.txt OV-61-1907-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1907.clin.txt 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TCGA-61-1907-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1907-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1907-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1907-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1907-01A-01R-0582-01.data.txt OV-61-1910-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1910.clin.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1910-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1910-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1910-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1910-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1910-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1910-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1910-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1910-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1910-01A-01D-0579-06.seg.txt TCGA-61-1910-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1910-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1910-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1910-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1910-01A-01R-0582-01.data.txt OV-61-1911-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1911.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1911.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1911.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1911.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1911-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1911-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1911-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1911-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1911-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1911-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1911-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1911-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1911-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1911-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1911-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1911-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1911-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1911-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-1911-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-1911-01A-01D-0579-06.seg.txt TCGA-61-1911-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1911-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1911-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1911-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1911-01A-01R-0582-01.data.txt OV-61-1913-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1913.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1913.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1913.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1913.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1913-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1913-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1913-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1913-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.19.2.0/TCGA-61-1913-01A-01R-0583-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1913-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1913-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1913-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1913-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1913-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1913-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1913-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1913-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1913-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1913-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1913-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1913-01A-01D-0579-06.seg.txt TCGA-61-1913-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1913-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1913-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1913-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1913-01A-01R-0582-01.data.txt OV-61-1914-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1914.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1914.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1914.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1914.clin.txt 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/xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.9.5.0/TCGA-61-1914-01A-01D-0581-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1914-01A-01T-0585-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1914-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1914-01A-01R-1567-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1914-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1914-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1914-01A-01R-1567-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1914-01A-01R-1567-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.19.2002.0/TCGA-61-1914-01A-01D-0577-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1914-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1914-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1914-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1914-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1914-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.7.1.0/TCGA-61-1914-01A-01D-0579-06.seg.txt TCGA-61-1914-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1914-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1914-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1914-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1914-01A-01R-0582-01.data.txt OV-61-1915-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1915.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.19.26.0/TCGA-61-1915.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1915.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.19.27.0/TCGA-61-1915.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.19.2.0/TCGA-61-1915-01A-01D-0578-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.3.1.0/TCGA-61-1915-01A-01D-0580-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.19.2.0/TCGA-61-1915-01A-01R-0583-03.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1915-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1915-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.19.2002.0/TCGA-61-1915-01A-01D-0577-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1915-01A-01D-0579-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.8.1.0/TCGA-61-1915-01A-01D-0579-06.seg.txt TCGA-61-1915-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1915-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1915-01A-01R-0584-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.19.1007.0/TCGA-61-1915-01A-01R-0582-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.19.1007.0/TCGA-61-1915-01A-01R-0582-01.data.txt OV-61-1916-TP /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.27.1.0/TCGA-61-1916-01A-01D-0804-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.7.0.0/TCGA-61-1916-01A-01D-0806-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.27.0.0/TCGA-61-1916-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-61-1916-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.27.0.0/TCGA-61-1916-01A-01R-0809-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.13.5.0/TCGA-61-1916-01A-01D-0807-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1916-01A-01T-0811-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1916-01A-21-1559-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.27.2002.0/TCGA-61-1916-01A-01D-0803-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-61-1916-01A-01D-0805-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.11.0.0/TCGA-61-1916-01A-01D-0805-06.seg.txt TCGA-61-1916-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1916-01A-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1916-01A-01R-0810-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.27.1007.0/TCGA-61-1916-01A-01R-0808-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.27.1007.0/TCGA-61-1916-01A-01R-0808-01.data.txt OV-61-1917-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1917.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1917.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-61-1917.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-61-1917.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.21.2.0/TCGA-61-1917-01A-01D-0649-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.4.1.0/TCGA-61-1917-01A-01D-0651-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.21.2.0/TCGA-61-1917-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-61-1917-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.21.2.0/TCGA-61-1917-01A-01R-0654-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.10.5.0/TCGA-61-1917-01A-01D-0652-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1917-01A-01T-0656-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1917-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1917-01A-01R-1568-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-61-1917-01A-01R-0653-01.data.txt OV-61-1918-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1918.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.21.24.0/TCGA-61-1918.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-61-1918.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.21.25.0/TCGA-61-1918.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-61-1918-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1918-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1918-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1918-01A-01D-0648-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1919-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.21.2002.0/TCGA-61-1919-01A-01D-0648-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1919-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1919-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1919-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.21.2002.0/TCGA-61-1919-01A-01D-0648-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-61-1919-01A-01D-0650-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-61-1919-01A-01D-0650-06.seg.txt TCGA-61-1919-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1919-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1919-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1919-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1919-01A-01R-0655-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.21.1007.0/TCGA-61-1919-01A-01R-0653-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.21.1007.0/TCGA-61-1919-01A-01R-0653-01.data.txt OV-61-1995-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-1995.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-1995.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-1995.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-1995.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.22.2.0/TCGA-61-1995-01A-01D-0664-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.5.0.0/TCGA-61-1995-01A-01D-0666-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.22.1.0/TCGA-61-1995-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-1995-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-1995-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.11.5.0/TCGA-61-1995-01A-01D-0667-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1995-01A-01T-0671-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-1995-01A-21-1559-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1995-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1995-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-61-1995-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1995-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1995-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1995-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1995-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-1995-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-1995-01A-01D-0665-06.seg.txt TCGA-61-1995-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1995-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1995-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1995-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1995-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-1995-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-1995-01A-01R-0668-01.data.txt OV-61-1998-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-1998.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-1998.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-1998.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-1998.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.22.2.0/TCGA-61-1998-01A-01D-0664-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.5.0.0/TCGA-61-1998-01A-01D-0666-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.22.1.0/TCGA-61-1998-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-1998-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-1998-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.11.5.0/TCGA-61-1998-01A-01D-0667-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-1998-01A-01T-0841-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1998-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-1998-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-61-1998-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1998-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1998-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1998-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-1998-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-1998-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-1998-01A-01D-0665-06.seg.txt TCGA-61-1998-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1998-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-1998-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-1998-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-1998-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-1998-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-1998-01A-01R-0668-01.data.txt OV-61-2000-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2000.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2000.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2000.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2000.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.22.2.0/TCGA-61-2000-01A-01D-0664-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.5.0.0/TCGA-61-2000-01A-01D-0666-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.22.1.0/TCGA-61-2000-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-2000-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-2000-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.11.5.0/TCGA-61-2000-01A-01D-0667-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-2000-01A-01T-0695-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-2000-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-2000-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-2000-01A-21-1559-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2000-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2000-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2000-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-2000-01A-01R-1568-13.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-61-2000-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2000-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2000-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2000-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2000-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2000-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2000-01A-01D-0665-06.seg.txt TCGA-61-2000-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2000-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2000-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-2000-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-2000-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-2000-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-2000-01A-01R-0668-01.data.txt OV-61-2002-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2002.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2002.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2002.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2002.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.22.2.0/TCGA-61-2002-01A-01D-0664-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.5.0.0/TCGA-61-2002-01A-01D-0666-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.22.1.0/TCGA-61-2002-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-2002-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-2002-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.11.5.0/TCGA-61-2002-01A-01D-0667-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-2002-01A-01T-0695-07.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-2002-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_OV.IlluminaHiSeq_miRNASeq.Level_3.1.1.0/TCGA-61-2002-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2002-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2002-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2002-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-61-2002-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2002-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2002-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2002-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2002-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2002-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2002-01A-01D-0665-06.seg.txt TCGA-61-2002-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2002-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2002-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-2002-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-2002-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-2002-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-2002-01A-01R-0668-01.data.txt OV-61-2003-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2003.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2003.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2003.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2003.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.22.2.0/TCGA-61-2003-01A-01D-0664-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.5.0.0/TCGA-61-2003-01A-01D-0666-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.22.1.0/TCGA-61-2003-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-2003-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.22.1.0/TCGA-61-2003-01A-01R-0669-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.11.5.0/TCGA-61-2003-01A-01D-0667-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-2003-01A-01T-0841-07.data.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2003-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2003-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-2003-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-2003-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-2003-01A-01R-0668-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2008-01A-02D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2008-01A-02D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2008-01A-02D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2008-01A-02D-0663-01.seg.txt 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/xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2009-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2009-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-2009-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-2009-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-2009-01A-01R-0668-01.data.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2016-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2016-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2016-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2016-01A-01D-0665-06.seg.txt TCGA-61-2016-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2016-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2016-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-2016-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-2016-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-2016-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-2016-01A-01R-0668-01.data.txt OV-61-2017-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2017.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2017.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2017.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2017.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2017-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2017-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2017-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2017-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2017-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2017-01A-01D-0665-06.seg.txt TCGA-61-2017-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-2017-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-2017-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-2017-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-2017-01A-01R-0668-01.data.txt OV-61-2018-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2018.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2018.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2018.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2018.clin.txt 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/xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2018-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2018-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2018-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2018-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2018-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.9.0.0/TCGA-61-2018-01A-01D-0665-06.seg.txt TCGA-61-2018-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-2018-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-2018-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-2018-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-2018-01A-01R-0668-01.data.txt OV-61-2087-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2087.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.22.26.0/TCGA-61-2087.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2087.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.22.27.0/TCGA-61-2087.clin.txt 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/xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-2113-01A-21-1562-20.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__exon_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2113-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__gene_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2113-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseq__illuminahiseq_rnaseq__bcgsc_ca__Level_3__splice_junction_expression__data/bcgsc.ca_OV.IlluminaHiSeq_RNASeq.Level_3.1.4.0/TCGA-61-2113-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-2113-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-2113-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-2113-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-2113-01A-01R-1568-13.data.txt /xchip/gdac_data/normalized/diced/ov/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_OV.IlluminaHiSeq_RNASeqV2.Level_3.1.1.0/TCGA-61-2113-01A-01R-1568-13.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.22.2002.0/TCGA-61-2113-01A-01D-0663-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2113-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2113-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2113-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.22.2002.0/TCGA-61-2113-01A-01D-0663-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_cna__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-61-2113-01A-01D-0665-06.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__human1mduo__hudsonalpha_org__Level_3__segmented_loh__seg/hudsonalpha.org_OV.Human1MDuo.Level_3.10.0.0/TCGA-61-2113-01A-01D-0665-06.seg.txt TCGA-61-2113-01 /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2113-01.wig.txt /xchip/gdac_data/normalized/diced/ov/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_OV.IlluminaGA_DNASeq.Level_2.2.6.0/TCGA-61-2113-01.maf.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.1.5.0/TCGA-61-2113-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.1.5.0/TCGA-61-2113-01A-01R-0670-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.22.1007.0/TCGA-61-2113-01A-01R-0668-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.22.1007.0/TCGA-61-2113-01A-01R-0668-01.data.txt OV-61-2610-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2610.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2610.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2610.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2610.clin.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-2610-01A-21-1561-20.data.txt TP TCGA-61-2610 OV-61-2611-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2611.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2611.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2611.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2611.clin.txt TP TCGA-61-2611 OV-61-2612-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2612.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2612.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2612.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2612.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-61-2612-01A-01D-1135-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-61-2612-01A-01D-1137-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-61-2612-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-61-2612-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-61-2612-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-61-2612-01A-01D-1138-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-2612-01A-01T-1142-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-2612-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-61-2612-01A-01D-1134-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2612-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2612-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2612-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2612-01A-01D-1134-01.seg.txt TCGA-61-2612-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-61-2612-01A-01R-1141-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-61-2612-01A-01R-1141-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-61-2612-01A-01R-1139-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-61-2612-01A-01R-1139-01.data.txt OV-61-2613-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2613.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2613.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2613.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2613.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-61-2613-01A-01D-1135-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-61-2613-01A-01D-1137-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-61-2613-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-61-2613-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-61-2613-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-61-2613-01A-01D-1138-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-2613-01A-01T-1142-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-2613-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-61-2613-01A-01D-1134-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2613-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2613-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2613-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2613-01A-01D-1134-01.seg.txt TCGA-61-2613-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-61-2613-01A-01R-1141-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-61-2613-01A-01R-1141-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-61-2613-01A-01R-1139-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-61-2613-01A-01R-1139-01.data.txt OV-61-2614-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2614.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.40.16.0/TCGA-61-2614.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2614.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_OV.bio.Level_1.40.17.0/TCGA-61-2614.clin.txt /xchip/gdac_data/normalized/diced/ov/cna__cgh_1x1m_g4447a__mskcc_org__Level_3__segmentation_data_computation__seg/mskcc.org_OV.CGH-1x1M_G4447A.Level_3.40.1.0/TCGA-61-2614-01A-01D-1135-04.seg.txt /xchip/gdac_data/normalized/diced/ov/cna__hg_cgh_415k_g4124a__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_OV.HG-CGH-415K_G4124A.Level_3.8.0.0/TCGA-61-2614-01A-01D-1137-02.seg.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_2__quantile_normalization_exon__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_2.40.1.0/TCGA-61-2614-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__quantile_normalization_gene__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-61-2614-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/exon__huex_1_0_st_v2__lbl_gov__Level_3__segmented_as_firma__data/lbl.gov_OV.HuEx-1_0-st-v2.Level_3.40.1.0/TCGA-61-2614-01A-01R-1140-03.data.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.14.5.0/TCGA-61-2614-01A-01D-1138-05.data.txt /xchip/gdac_data/normalized/diced/ov/mirna__h_mirna_8x15kv2__unc_edu__Level_3__unc_DWD_Batch_adjusted__data/unc.edu_OV.H-miRNA_8x15Kv2.Level_3.1.7.0/TCGA-61-2614-01A-01T-1142-07.data.txt /xchip/gdac_data/normalized/diced/ov/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_OV.MDA_RPPA_Core.Level_3.1.1.0/TCGA-61-2614-01A-21-1561-20.data.txt TP /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_2.40.2002.0/TCGA-61-2614-01A-01D-1134-01.birdseed.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2614-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2614-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2614-01A-01D-1134-01.seg.txt /xchip/gdac_data/normalized/diced/ov/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_OV.Genome_Wide_SNP_6.Level_3.40.2002.0/TCGA-61-2614-01A-01D-1134-01.seg.txt TCGA-61-2614-01 /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_2.2.0.0/TCGA-61-2614-01A-01R-1141-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_OV.AgilentG4502A_07_3.Level_3.2.0.0/TCGA-61-2614-01A-01R-1141-07.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_2__probeset_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_2.40.1007.0/TCGA-61-2614-01A-01R-1139-01.data.txt /xchip/gdac_data/normalized/diced/ov/transcriptome__ht_hg_u133a__broad_mit_edu__Level_3__gene_rma__data/broad.mit.edu_OV.HT_HG-U133A.Level_3.40.1007.0/TCGA-61-2614-01A-01R-1139-01.data.txt OV-72-4231-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4231.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4231.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4231.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4231-01A-01D-1011-05.data.txt TP TCGA-72-4231-01 OV-72-4232-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4232.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4232.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4232.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4232-01A-01D-1011-05.data.txt TP TCGA-72-4232-01 OV-72-4233-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4233.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4233.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4233.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4233-01A-01D-1011-05.data.txt TP TCGA-72-4233-01 OV-72-4234-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4234.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4234.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4234.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4234-01A-01D-1011-05.data.txt TP TCGA-72-4234-01 OV-72-4235-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4235.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4235.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4235.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4235-01A-01D-1011-05.data.txt TP TCGA-72-4235-01 OV-72-4236-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4236.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4236.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4236.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4236-01A-01D-1011-05.data.txt TP TCGA-72-4236-01 OV-72-4237-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4237.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4237.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4237.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4237-01A-01D-1011-05.data.txt TP TCGA-72-4237-01 OV-72-4238-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4238.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4238.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4238.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4238-01A-01D-1011-05.data.txt TP TCGA-72-4238-01 OV-72-4240-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4240.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4240.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4240.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4240-01A-01D-1011-05.data.txt TP TCGA-72-4240-01 OV-72-4241-TP /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_OV.bio.Level_1.44.11.0/TCGA-72-4241.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_OV.bio.Level_1.44.5.0/TCGA-72-4241.clin.txt /xchip/gdac_data/normalized/diced/ov/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_OV.bio.Level_1.44.12.0/TCGA-72-4241.clin.txt /xchip/gdac_data/normalized/diced/ov/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_OV.HumanMethylation27.Level_3.15.5.0/TCGA-72-4241-01A-01D-1011-05.data.txt TP TCGA-72-4241-01 READ-AF-2687-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2687.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2687.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2687.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2687.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2687.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2687.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AF-2687-01A-02D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-2687-01A-02T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-2687-01A-02T-1735-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AF-2687-01A-02D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2687-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2687-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2687-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2687-01A-02D-1732-01.seg.txt TCGA-AF-2687-01 READ-AF-2689-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2689.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2689.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2689.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2689.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2689.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2689.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AF-2689-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-2689-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-2689-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-2689-01A-21-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AF-2689-01A-01D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2689-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2689-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2689-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2689-01A-01D-1549-01.seg.txt TCGA-AF-2689-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AF-2689-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AF-2689-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AF-2689-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AF-2689-01A-01R-0821-07.data.txt READ-AF-2690-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2690.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2690.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2690.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2690.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2690.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2690.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AF-2690-01A-02D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-2690-01A-02T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-2690-01A-02T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-2690-01A-11-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AF-2690-01A-02D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2690-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2690-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2690-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2690-01A-02D-1732-01.seg.txt TCGA-AF-2690-01 READ-AF-2691-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2691.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2691.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2691.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2691.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2691.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2691.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AF-2691-01A-01D-1167-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AF-2691-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-2691-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-2691-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-2691-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-2691-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-2691-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2691-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2691-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2691-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2691-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2691-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AF-2691-01A-01D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2691-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2691-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2691-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2691-01A-01D-1549-01.seg.txt TCGA-AF-2691-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AF-2691-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AF-2691-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AF-2691-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AF-2691-01A-01R-0821-07.data.txt READ-AF-2692-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2692.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2692.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-2692.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2692.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2692.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-2692.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AF-2692-01A-01D-1167-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AF-2692-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-2692-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-2692-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-2692-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-2692-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-2692-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2692-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2692-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2692-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2692-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-2692-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AF-2692-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2692-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2692-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2692-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-2692-01A-01D-0819-01.seg.txt TCGA-AF-2692-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AF-2692-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AF-2692-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AF-2692-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AF-2692-01A-01R-0821-07.data.txt READ-AF-2693-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2693.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2693.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-2693.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2693.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2693.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-2693.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AF-2693-01A-02D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-2693-01A-02T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-2693-01A-02T-1735-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AF-2693-01A-02D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2693-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2693-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2693-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-2693-01A-02D-1732-01.seg.txt TCGA-AF-2693-01 READ-AF-3400-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-3400.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-3400.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AF-3400.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-3400.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-3400.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AF-3400.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AF-3400-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-3400-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-3400-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-3400-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-3400-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-3400-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-3400-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3400-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3400-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3400-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3400-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3400-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AF-3400-01A-01D-1549-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-3400-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-3400-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-3400-01A-01D-1549-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AF-3400-01A-01D-1549-01.seg.txt TCGA-AF-3400-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AF-3400-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AF-3400-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AF-3400-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AF-3400-01A-01R-0821-07.data.txt READ-AF-3911-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-3911.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-3911.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-3911.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-3911.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-3911.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-3911.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AF-3911-01A-01D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-3911-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-3911-01A-01T-1735-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AF-3911-01A-01D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-3911-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-3911-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-3911-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-3911-01A-01D-1732-01.seg.txt TCGA-AF-3911-01 READ-AF-3912-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AF-3912.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AF-3912.clin.txt TP TCGA-AF-3912 READ-AF-3913-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AF-3913.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AF-3913.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AF-3913.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AF-3913.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AF-3913.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AF-3913.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AF-3913-01A-02D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AF-3913-01A-02D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-3913-01A-02T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AF-3913-01A-02T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-3913-01A-11-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-3913-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-3913-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AF-3913-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3913-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3913-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3913-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3913-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AF-3913-01A-02R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AF-3913-01A-02D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AF-3913-01A-02D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AF-3913-01A-02D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AF-3913-01A-02D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AF-3913-01A-02D-1428-01.seg.txt TCGA-AF-3913-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AF-3913-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AF-3913-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AF-3913-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AF-3913-01A-02R-1119-07.data.txt READ-AF-3914-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AF-3914.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AF-3914.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AF-3914.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AF-3914.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AF-3914.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AF-3914.clin.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-3914-01A-21-1933-20.data.txt TP TCGA-AF-3914-01 READ-AF-4110-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-4110.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-4110.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AF-4110.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-4110.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-4110.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AF-4110.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AF-4110-01A-02D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-4110-01A-02T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-4110-01A-02T-1735-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AF-4110-01A-02D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-4110-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-4110-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-4110-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AF-4110-01A-02D-1732-01.seg.txt TCGA-AF-4110-01 READ-AF-5654-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AF-5654.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AF-5654.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AF-5654.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AF-5654.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AF-5654.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AF-5654.clin.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-5654-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-5654-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-5654-01A-41-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-AF-5654-01A-01D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AF-5654-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AF-5654-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AF-5654-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AF-5654-01A-01D-1656-01.seg.txt TCGA-AF-5654-01 READ-AF-6136-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6136.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6136.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6136.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6136.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6136.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6136.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-AF-6136-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-6136-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-6136-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-6136-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-AF-6136-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6136-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6136-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6136-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6136-01A-11D-1825-01.seg.txt TCGA-AF-6136-01 READ-AF-6655-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6655.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6655.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6655.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6655.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6655.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6655.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-AF-6655-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-6655-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-6655-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-6655-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-AF-6655-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6655-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6655-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6655-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6655-01A-11D-1825-01.seg.txt TCGA-AF-6655-01 READ-AF-6672-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6672.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6672.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AF-6672.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6672.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6672.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AF-6672.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-AF-6672-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-6672-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AF-6672-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AF-6672-01A-41-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-AF-6672-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6672-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6672-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6672-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AF-6672-01A-11D-1825-01.seg.txt TCGA-AF-6672-01 READ-AG-3574-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3574.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3574.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3574.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3574.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3574.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3574.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-3574-01A-01D-1167-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3574-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3574-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3574-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3574-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3574-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3574-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3574-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3574-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3574-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3574-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3574-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3574-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3574-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3574-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3574-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3574-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3574-01A-01D-0819-01.seg.txt TCGA-AG-3574-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3574-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3574-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3574-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3574-01A-01R-0821-07.data.txt READ-AG-3575-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3575.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3575.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3575.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3575.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3575.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3575.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3575-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3575-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3575-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3575-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3575-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3575-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3575-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3575-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3575-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3575-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3575-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3575-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3575-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3575-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3575-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3575-01A-01D-0819-01.seg.txt TCGA-AG-3575-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3575-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3575-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3575-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3575-01A-01R-0821-07.data.txt READ-AG-3578-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3578.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3578.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3578.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3578.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3578.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3578.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3578-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3578-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3578-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3578-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3578-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3578-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3578-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3578-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3578-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3578-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3578-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3578-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3578-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3578-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3578-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3578-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3578-01A-01D-0819-01.seg.txt TCGA-AG-3578-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3578-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3578-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3578-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3578-01A-01R-0821-07.data.txt READ-AG-3580-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3580.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3580.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3580.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3580.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3580.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3580.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3580-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3580-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3580-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3580-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3580-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3580-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3580-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3580-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3580-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3580-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3580-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3580-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3580-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3580-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3580-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3580-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3580-01A-01D-0819-01.seg.txt TCGA-AG-3580-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3580-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3580-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3580-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3580-01A-01R-0821-07.data.txt READ-AG-3581-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3581.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3581.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3581.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3581.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3581.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3581.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3581-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3581-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3581-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3581-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3581-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3581-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3581-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3581-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3581-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3581-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3581-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3581-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3581-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3581-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3581-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3581-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3581-01A-01D-0819-01.seg.txt TCGA-AG-3581-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3581-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3581-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3581-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3581-01A-01R-0821-07.data.txt READ-AG-3582-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3582.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3582.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3582.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3582.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3582.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3582.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3582-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3582-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3582-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3582-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3582-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3582-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3582-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3582-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3582-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3582-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3582-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3582-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3582-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3582-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3582-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3582-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3582-01A-01D-0819-01.seg.txt TCGA-AG-3582-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3582-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3582-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3582-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3582-01A-01R-0821-07.data.txt READ-AG-3583-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3583.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3583.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3583.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3583.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3583.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3583.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3583-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3583-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3583-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3583-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3583-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3583-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3583-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3583-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3583-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3583-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3583-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3583-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3583-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3583-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3583-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3583-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3583-01A-01D-0819-01.seg.txt TCGA-AG-3583-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3583-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3583-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3583-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3583-01A-01R-0821-07.data.txt READ-AG-3584-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3584.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3584.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3584.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3584.clin.txt 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/xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3584-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3584-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3584-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3584-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3584-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3584-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3584-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3584-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3584-01A-01D-0819-01.seg.txt TCGA-AG-3584-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3584-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3584-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3584-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3584-01A-01R-0821-07.data.txt READ-AG-3586-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3586.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3586.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3586.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3586.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3586.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3586.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3586-01A-02D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3586-01A-02T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3586-01A-02T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3586-01A-11-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3586-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3586-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3586-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3586-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3586-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3586-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3586-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3586-01A-02R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3586-01A-02D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3586-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3586-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3586-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3586-01A-02D-0819-01.seg.txt TCGA-AG-3586-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3586-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3586-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3586-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3586-01A-02R-0821-07.data.txt READ-AG-3587-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3587.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3587.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3587.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3587.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3587.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3587.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3587-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3587-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3587-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3587-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3587-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3587-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3587-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3587-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3587-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3587-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3587-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3587-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3587-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3587-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3587-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3587-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3587-01A-01D-0819-01.seg.txt TCGA-AG-3587-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3587-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3587-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3587-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3587-01A-01R-0821-07.data.txt READ-AG-3591-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3591.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3591.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3591.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3591.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3591.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3591.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AG-3591-01A-01D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3591-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3591-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3591-01A-21-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AG-3591-01A-01D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3591-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3591-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3591-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3591-01A-01D-1732-01.seg.txt TCGA-AG-3591-01 READ-AG-3592-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3592.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3592.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3592.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3592.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3592.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3592.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AG-3592-01A-02D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3592-01A-02T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3592-01A-02T-1735-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AG-3592-01A-02D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3592-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3592-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3592-01A-02D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3592-01A-02D-1732-01.seg.txt TCGA-AG-3592-01 READ-AG-3593-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3593.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3593.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3593.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3593.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3593.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3593.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3593-01A-01D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3593-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3593-01A-01T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3593-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3593-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3593-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3593-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3593-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3593-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3593-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3593-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3593-01A-01R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3593-01A-01D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3593-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3593-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3593-01A-01D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3593-01A-01D-0819-01.seg.txt TCGA-AG-3593-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3593-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3593-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3593-01A-01R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3593-01A-01R-0821-07.data.txt READ-AG-3594-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3594.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3594.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3594.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3594.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3594.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3594.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.1.4.0/TCGA-AG-3594-01A-02D-0820-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3594-01A-02T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3594-01A-02T-0822-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3594-01A-11-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3594-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3594-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3594-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3594-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3594-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3594-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3594-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3594-01A-02R-0821-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3594-01A-02D-0819-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3594-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3594-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3594-01A-02D-0819-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3594-01A-02D-0819-01.seg.txt TCGA-AG-3594-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3594-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3594-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3594-01A-02R-0821-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3594-01A-02R-0821-07.data.txt READ-AG-3598-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3598.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3598.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3598.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3598.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3598.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3598.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3598-01A-01D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3598-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3598-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3598-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3598-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3598-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3598-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3598-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3598-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3598-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3598-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3598-01A-01R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3598-01A-01D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3598-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3598-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3598-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3598-01A-01D-0824-01.seg.txt TCGA-AG-3598-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3598-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3598-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3598-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3598-01A-01R-0826-07.data.txt READ-AG-3599-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3599.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3599.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3599.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3599.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3599.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3599.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3599-01A-02D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3599-01A-02T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3599-01A-02T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3599-01A-11-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3599-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3599-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3599-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3599-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3599-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3599-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3599-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3599-01A-02R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3599-01A-02D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3599-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3599-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3599-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3599-01A-02D-0824-01.seg.txt TCGA-AG-3599-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3599-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3599-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3599-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3599-01A-02R-0826-07.data.txt READ-AG-3600-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3600.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3600.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3600.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3600.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3600.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3600.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3600-01A-01D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3600-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3600-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3600-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3600-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3600-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3600-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3600-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3600-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3600-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3600-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3600-01A-01R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3600-01A-01D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3600-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3600-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3600-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3600-01A-01D-0824-01.seg.txt TCGA-AG-3600-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3600-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3600-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3600-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3600-01A-01R-0826-07.data.txt READ-AG-3601-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3601.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3601.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3601.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3601.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3601.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3601.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3601-01A-01D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3601-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3601-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3601-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3601-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3601-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3601-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3601-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3601-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3601-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3601-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3601-01A-01R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3601-01A-01D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3601-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3601-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3601-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3601-01A-01D-0824-01.seg.txt TCGA-AG-3601-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3601-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3601-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3601-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3601-01A-01R-0826-07.data.txt READ-AG-3602-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3602.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3602.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3602.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3602.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3602.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3602.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3602-01A-02D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3602-01A-02T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3602-01A-02T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3602-01A-11-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3602-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3602-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3602-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3602-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3602-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3602-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3602-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3602-01A-02R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3602-01A-02D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3602-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3602-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3602-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3602-01A-02D-0824-01.seg.txt TCGA-AG-3602-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3602-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3602-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3602-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3602-01A-02R-0826-07.data.txt READ-AG-3605-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3605.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3605.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3605.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3605.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3605.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3605.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3605-01A-01D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3605-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3605-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3605-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3605-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3605-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3605-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3605-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3605-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3605-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3605-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3605-01A-01R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3605-01A-01D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3605-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3605-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3605-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3605-01A-01D-0824-01.seg.txt TCGA-AG-3605-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3605-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3605-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3605-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3605-01A-01R-0826-07.data.txt READ-AG-3608-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3608.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3608.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3608.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3608.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3608.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3608.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3608-01A-01D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3608-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3608-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3608-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3608-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3608-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3608-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3608-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3608-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3608-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3608-01A-01R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3608-01A-01D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3608-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3608-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3608-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3608-01A-01D-0824-01.seg.txt TCGA-AG-3608-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3608-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3608-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3608-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3608-01A-01R-0826-07.data.txt READ-AG-3609-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3609.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3609.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3609.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3609.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3609.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3609.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3609-01A-02D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3609-01A-02T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3609-01A-02T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3609-01A-11-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3609-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3609-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3609-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3609-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3609-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3609-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3609-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3609-01A-02R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3609-01A-02D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3609-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3609-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3609-01A-02D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3609-01A-02D-0824-01.seg.txt TCGA-AG-3609-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3609-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3609-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3609-01A-02R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3609-01A-02R-0826-07.data.txt READ-AG-3611-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3611.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3611.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3611.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3611.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3611.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3611.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3611-01A-01D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3611-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3611-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3611-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3611-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3611-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3611-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3611-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3611-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3611-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3611-01A-01R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3611-01A-01D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3611-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3611-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3611-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3611-01A-01D-0824-01.seg.txt TCGA-AG-3611-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3611-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3611-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3611-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3611-01A-01R-0826-07.data.txt READ-AG-3612-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3612.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3612.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3612.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3612.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3612.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3612.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.2.4.0/TCGA-AG-3612-01A-01D-0825-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3612-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3612-01A-01T-0827-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3612-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3612-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3612-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3612-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3612-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3612-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3612-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3612-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3612-01A-01R-0826-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3612-01A-01D-0824-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3612-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3612-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3612-01A-01D-0824-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3612-01A-01D-0824-01.seg.txt TCGA-AG-3612-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3612-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-3612-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3612-01A-01R-0826-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3612-01A-01R-0826-07.data.txt READ-AG-3725-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3725.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3725.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3725.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3725.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3725.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3725.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AG-3725-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3725-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3725-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3725-01A-12-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AG-3725-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3725-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3725-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3725-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3725-01A-11D-1732-01.seg.txt TCGA-AG-3725-01 READ-AG-3726-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3726.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3726.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3726.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3726.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3726.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3726.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.5.4.0/TCGA-AG-3726-01A-02D-0904-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3726-01A-02T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3726-01A-02T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3726-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3726-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3726-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3726-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3726-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3726-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3726-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3726-01A-02R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3726-01A-02D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3726-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3726-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3726-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3726-01A-02D-0903-01.seg.txt TCGA-AG-3726-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3726-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3726-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3726-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3726-01A-02R-0905-07.data.txt READ-AG-3727-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3727.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3727.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3727.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3727.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3727.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3727.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-3727-01A-01D-1167-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.5.4.0/TCGA-AG-3727-01A-01D-0904-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3727-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3727-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3727-01A-21-1932-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3727-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3727-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3727-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3727-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3727-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3727-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3727-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3727-01A-01R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3727-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3727-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3727-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3727-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3727-01A-01D-0903-01.seg.txt TCGA-AG-3727-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3727-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3727-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3727-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3727-01A-01R-0905-07.data.txt READ-AG-3728-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3728.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3728.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3728.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3728.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3728.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3728.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3728-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3728-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3728-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3728-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3728-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3728-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3728-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3728-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3728-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3728-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3728-01A-01R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3728-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3728-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3728-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3728-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3728-01A-01D-0903-01.seg.txt TCGA-AG-3728-01 /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3728-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3728-01A-01R-0905-07.data.txt READ-AG-3731-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3731.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3731.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-3731.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3731.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3731.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-3731.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AG-3731-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3731-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3731-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3731-01A-12-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AG-3731-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3731-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3731-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3731-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-3731-01A-11D-1732-01.seg.txt TCGA-AG-3731-01 READ-AG-3732-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AG-3732.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AG-3732.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AG-3732.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AG-3732.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AG-3732.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AG-3732.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-AG-3732-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3732-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3732-01A-11H-1659-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-AG-3732-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AG-3732-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AG-3732-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AG-3732-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AG-3732-01A-11D-1656-01.seg.txt TCGA-AG-3732-01 READ-AG-3742-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AG-3742.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AG-3742.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-AG-3742.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AG-3742.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AG-3742.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-AG-3742.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-AG-3742-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3742-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-3742-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3742-01A-12-1932-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-AG-3742-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AG-3742-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AG-3742-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AG-3742-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-AG-3742-01A-11D-1656-01.seg.txt TCGA-AG-3742-01 READ-AG-3878-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3878.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3878.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3878.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3878.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3878.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3878.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-3878-01A-02D-1167-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.5.4.0/TCGA-AG-3878-01A-02D-0904-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3878-01A-02T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3878-01A-02T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3878-01A-11-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3878-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3878-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3878-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3878-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3878-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3878-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3878-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3878-01A-02R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3878-01A-02D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3878-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3878-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3878-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3878-01A-02D-0903-01.seg.txt TCGA-AG-3878-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3878-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3878-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3878-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3878-01A-02R-0905-07.data.txt READ-AG-3881-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3881.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3881.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3881.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3881.clin.txt 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/xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3881-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3881-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3881-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3881-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3881-01A-01R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3881-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3881-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3881-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3881-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3881-01A-01D-0903-01.seg.txt TCGA-AG-3881-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3881-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3881-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3881-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3881-01A-01R-0905-07.data.txt READ-AG-3882-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3882.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3882-01A-01D-0957-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.5.4.0/TCGA-AG-3882-01A-01D-0904-05.data.txt 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/xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3882-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3882-01A-01R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3882-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3882-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3882-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3882-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3882-01A-01D-0903-01.seg.txt TCGA-AG-3882-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3882-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3882-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3882-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3882-01A-01R-0905-07.data.txt READ-AG-3883-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3883.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.5.4.0/TCGA-AG-3883-01A-02D-0904-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3883-01A-02T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3883-01A-02T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3883-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3883-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3883-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3883-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3883-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3883-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3883-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3883-01A-02R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3883-01A-02D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3883-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3883-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3883-01A-02D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3883-01A-02D-0903-01.seg.txt TCGA-AG-3883-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3883-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3883-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3883-01A-02R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3883-01A-02R-0905-07.data.txt READ-AG-3885-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.42.26.0/TCGA-AG-3885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.42.28.0/TCGA-AG-3885.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3885-01A-01D-0957-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.5.4.0/TCGA-AG-3885-01A-01D-0904-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3885-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3885-01A-01T-0906-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3885-01A-21-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3885-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3885-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3885-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3885-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3885-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3885-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3885-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3885-01A-01R-0905-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.42.2002.0/TCGA-AG-3885-01A-01D-0903-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3885-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3885-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3885-01A-01D-0903-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.42.2002.0/TCGA-AG-3885-01A-01D-0903-01.seg.txt TCGA-AG-3885-01 /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3885-01A-01R-0905-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3885-01A-01R-0905-07.data.txt READ-AG-3887-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3887.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3887.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3887.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3887.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3887.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3887.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3887-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-3887-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3887-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3887-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3887-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3887-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3887-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3887-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3887-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3887-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3887-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3887-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3887-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3887-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3887-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3887-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3887-01A-01D-1428-01.seg.txt TCGA-AG-3887-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3887-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3887-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3887-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3887-01A-01R-1119-07.data.txt READ-AG-3890-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3890.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3890.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3890.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3890.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3890.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3890.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3890-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-3890-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3890-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3890-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3890-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3890-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3890-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3890-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3890-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3890-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3890-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3890-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3890-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3890-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3890-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3890-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3890-01A-01D-1428-01.seg.txt TCGA-AG-3890-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3890-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3890-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3890-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3890-01A-01R-1119-07.data.txt READ-AG-3891-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3891.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3891.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3891.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3891.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3891.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3891.clin.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3891-01A-21-1933-20.data.txt TP TCGA-AG-3891-01 READ-AG-3892-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3892.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3892.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3892.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3892.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3892.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3892.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3892-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-3892-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3892-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3892-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3892-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3892-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3892-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3892-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3892-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3892-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3892-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3892-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3892-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3892-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3892-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3892-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3892-01A-01D-1428-01.seg.txt TCGA-AG-3892-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3892-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3892-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3892-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3892-01A-01R-1119-07.data.txt READ-AG-3893-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3893.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3893.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3893.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3893.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3893.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3893.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3893-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-3893-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3893-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3893-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3893-01A-21-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3893-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3893-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3893-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3893-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3893-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3893-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3893-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3893-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3893-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3893-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3893-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3893-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3893-01A-01D-1428-01.seg.txt TCGA-AG-3893-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3893-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3893-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3893-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3893-01A-01R-1119-07.data.txt READ-AG-3894-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3894.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3894.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3894.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3894.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3894.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3894.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3894-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-3894-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3894-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3894-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3894-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3894-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3894-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3894-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3894-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3894-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3894-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3894-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3894-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3894-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3894-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3894-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3894-01A-01D-1428-01.seg.txt TCGA-AG-3894-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3894-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3894-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3894-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3894-01A-01R-1119-07.data.txt READ-AG-3896-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3896.clin.txt 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/xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3896-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3896-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3896-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3896-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3896-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3896-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3896-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3896-01A-01D-1428-01.seg.txt 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/xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3896-01A-01R-1119-07.data.txt READ-AG-3898-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3898.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3898.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3898.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3898.clin.txt 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/xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3898-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3898-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3898-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3898-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3898-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3898-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3898-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3898-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3898-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3898-01A-01D-1428-01.seg.txt TCGA-AG-3898-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3898-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3898-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3898-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3898-01A-01R-1119-07.data.txt READ-AG-3901-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3901.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3901.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3901.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3901.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3901.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3901.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3901-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-3901-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3901-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-3901-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-3901-01A-21-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3901-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3901-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-3901-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3901-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3901-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3901-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3901-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-3901-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3901-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3901-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3901-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3901-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3901-01A-01D-1428-01.seg.txt TCGA-AG-3901-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3901-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3901-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3901-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3901-01A-01R-1119-07.data.txt READ-AG-3902-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3902.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3902.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3902.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3902.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3902.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3902.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-3902-01A-01D-1115-02.seg.txt 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/xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3902-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3902-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3902-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3902-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3902-01A-01D-1428-01.seg.txt TCGA-AG-3902-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3902-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-3902-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-3902-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-3902-01A-01R-1119-07.data.txt READ-AG-3906-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3906.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3906.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-3906.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-3906.clin.txt 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/xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-3909-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3909-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3909-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-3909-01A-01D-1428-01.seg.txt 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/xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4001-01A-02D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4001-01A-02D-1428-01.seg.txt TCGA-AG-4001-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4001-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4001-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-4001-01A-02R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-4001-01A-02R-1119-07.data.txt READ-AG-4005-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4005.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4005.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4005.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4005.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4005.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4005.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-4005-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-4005-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-4005-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-4005-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-4005-01A-21-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4005-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4005-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4005-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4005-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4005-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4005-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4005-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4005-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-4005-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4005-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4005-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4005-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4005-01A-01D-1428-01.seg.txt TCGA-AG-4005-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4005-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4005-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-4005-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-4005-01A-01R-1119-07.data.txt READ-AG-4007-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4007.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4007.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4007.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4007.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4007.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4007.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-4007-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-4007-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-4007-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-4007-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-4007-01A-21-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4007-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4007-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4007-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4007-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4007-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4007-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4007-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4007-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-4007-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4007-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4007-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4007-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4007-01A-01D-1428-01.seg.txt TCGA-AG-4007-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4007-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4007-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-4007-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-4007-01A-01R-1119-07.data.txt READ-AG-4008-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4008.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4008.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4008.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4008.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4008.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4008.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-4008-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-4008-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-4008-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-4008-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-4008-01A-21-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4008-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4008-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4008-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4008-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4008-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4008-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4008-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4008-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-4008-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4008-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4008-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4008-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4008-01A-01D-1428-01.seg.txt TCGA-AG-4008-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4008-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4008-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-4008-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-4008-01A-01R-1119-07.data.txt READ-AG-4009-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4009.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4009.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4009.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4009.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4009.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4009.clin.txt TP TCGA-AG-4009 READ-AG-4015-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4015.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4015.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.46.23.0/TCGA-AG-4015.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4015.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4015.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.46.25.0/TCGA-AG-4015.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-4015-01A-01D-1115-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.7.4.0/TCGA-AG-4015-01A-01D-1116-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-4015-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-4015-01A-01T-1120-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-4015-01A-21-1933-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4015-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4015-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-4015-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4015-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4015-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4015-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4015-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-4015-01A-01R-1119-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.46.2002.0/TCGA-AG-4015-01A-01D-1428-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4015-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4015-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4015-01A-01D-1428-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.46.2003.0/TCGA-AG-4015-01A-01D-1428-01.seg.txt TCGA-AG-4015-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4015-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-4015-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-4015-01A-01R-1119-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-4015-01A-01R-1119-07.data.txt READ-AG-4021-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-4021.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-4021.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-4021.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-4021.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-4021.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-4021.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AG-4021-01A-01D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-4021-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-4021-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-4021-01A-21-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AG-4021-01A-01D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-4021-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-4021-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-4021-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-4021-01A-01D-1732-01.seg.txt TCGA-AG-4021-01 READ-AG-4022-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-4022.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-4022.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-AG-4022.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-4022.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-4022.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-AG-4022.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-AG-4022-01A-01D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-4022-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AG-4022-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-4022-01A-21-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-AG-4022-01A-01D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-4022-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-4022-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-4022-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-AG-4022-01A-01D-1732-01.seg.txt TCGA-AG-4022-01 READ-AG-A002-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A002.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A002.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A002.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-A002-01A-01D-A077-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.3.4.0/TCGA-AG-A002-01A-01D-A004-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A002-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A002-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A002-01A-31-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A002-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A002-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A002-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A002-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A002-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A002-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A002-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A002-01A-01R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A002-01A-01D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A002-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A002-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A002-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A002-01A-01D-A003-01.seg.txt TCGA-AG-A002-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A002-01.wig.txt 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/xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A008.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A008.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A008.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-A008-01A-01D-A077-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.3.4.0/TCGA-AG-A008-01A-01D-A004-05.data.txt 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/xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A008-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A008-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A008-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A008-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A008-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A008-01A-01R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A008-01A-01D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A008-01A-01D-A003-01.seg.txt 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/xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00C-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00C-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00C-01A-01R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A00C-01A-01D-A003-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A00C-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A00C-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A00C-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A00C-01A-01R-A002-07.data.txt READ-AG-A00H-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A00H.clin.txt 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/xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A00H-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A00H-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A00H-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A00H-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A00H-01A-01D-A008-01.seg.txt TCGA-AG-A00H-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A00H-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A00H-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A00H-01A-01R-A00A-07.data.txt READ-AG-A00Y-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A00Y.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A00Y.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A00Y.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-A00Y-01A-02D-A077-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.3.4.0/TCGA-AG-A00Y-01A-02D-A004-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A00Y-01A-11-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A00Y-01A-02D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A00Y-01A-02D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A00Y-01A-02D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A00Y-01A-02D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A00Y-01A-02D-A003-01.seg.txt TCGA-AG-A00Y-01 /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A00Y-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A00Y-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A00Y-01A-02R-A002-07.data.txt READ-AG-A011-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A011.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A011.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A011.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-A011-01A-01D-A077-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.3.4.0/TCGA-AG-A011-01A-01D-A004-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A011-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A011-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A011-01A-31-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A011-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A011-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A011-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A011-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A011-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A011-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A011-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A011-01A-01R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A011-01A-01D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A011-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A011-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A011-01A-01D-A003-01.seg.txt 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/xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A011-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A011-01A-01R-A002-07.data.txt READ-AG-A014-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A014.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A014.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A014.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.3.4.0/TCGA-AG-A014-01A-02D-A004-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A014-01A-11-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A014-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A014-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A014-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A014-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A014-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A014-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A014-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A014-01A-02R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A014-01A-02D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A014-01A-02D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A014-01A-02D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A014-01A-02D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A014-01A-02D-A003-01.seg.txt TCGA-AG-A014-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A014-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A014-01.maf.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A014-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A014-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A014-01A-02R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A014-01A-02R-A002-07.data.txt READ-AG-A015-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A015.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A015.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A015.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.3.4.0/TCGA-AG-A015-01A-01D-A004-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A015-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A015-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A015-01A-31-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A015-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A015-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A015-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A015-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A015-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A015-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A015-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A015-01A-01R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A015-01A-01D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A015-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A015-01A-01D-A003-01.seg.txt 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/xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A015-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A015-01A-01R-A002-07.data.txt READ-AG-A016-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A016.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A016.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A016.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.3.4.0/TCGA-AG-A016-01A-01D-A004-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A016-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A016-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A016-01A-31-A17N-20.data.txt 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/xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A016-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A016-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A016-01A-01R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A016-01A-01D-A003-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A016-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A016-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A016-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A016-01A-01R-A002-07.data.txt READ-AG-A01J-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01J.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01J.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01J.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.4.4.0/TCGA-AG-A01J-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A01J-01A-21-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A01J-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01J-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01J-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01J-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01J-01A-01D-A008-01.seg.txt TCGA-AG-A01J-01 /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A01J-01A-01R-A00A-07.data.txt READ-AG-A01L-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01L.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01L.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01L.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.3.4.0/TCGA-AG-A01L-01A-01D-A004-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A01L-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A01L-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A01L-01A-01D-A003-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01L-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01L-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01L-01A-01D-A003-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01L-01A-01D-A003-01.seg.txt TCGA-AG-A01L-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A01L-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A01L-01.maf.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Coverage_Calculation__wig/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A01L-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__solid_dna__bcm_edu__Level_2__Mutation_Calling__maf/bcm.edu_READ.SOLiD_DNA.Level_2.2.4.0/TCGA-AG-A01L-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A01L-01A-01R-A002-07.data.txt READ-AG-A01N-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01N.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01N.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A01N.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-A01N-01A-01D-A077-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.4.4.0/TCGA-AG-A01N-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A01N-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A01N-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A01N-01A-31-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A01N-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01N-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01N-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01N-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A01N-01A-01D-A008-01.seg.txt TCGA-AG-A01N-01 /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A01N-01A-01R-A00A-07.data.txt READ-AG-A01W-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A01W.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A01W.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A01W.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-A01W-01A-21D-A079-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.1.2.0/TCGA-AG-A01W-01A-21D-A081-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A01W-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A01W-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A01W-01A-31-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01W-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01W-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01W-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01W-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01W-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01W-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01W-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01W-01A-21R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.67.2002.0/TCGA-AG-A01W-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A01W-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A01W-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A01W-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A01W-01A-21D-A080-01.seg.txt TCGA-AG-A01W-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A01W-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A01W-01.maf.txt READ-AG-A01Y-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A01Y.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A01Y.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A01Y.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-A01Y-01A-41D-A079-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.1.2.0/TCGA-AG-A01Y-01A-41D-A081-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A01Y-01A-41R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A01Y-01A-41R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A01Y-01A-51-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01Y-01A-41R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01Y-01A-41R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A01Y-01A-41R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01Y-01A-41R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01Y-01A-41R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01Y-01A-41R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01Y-01A-41R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A01Y-01A-41R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.67.2002.0/TCGA-AG-A01Y-01A-41D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A01Y-01A-41D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A01Y-01A-41D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A01Y-01A-41D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A01Y-01A-41D-A080-01.seg.txt TCGA-AG-A01Y-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A01Y-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A01Y-01.maf.txt READ-AG-A020-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A020.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A020.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A020.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.3.2.0/TCGA-AG-A020-01A-21D-A079-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.1.2.0/TCGA-AG-A020-01A-21D-A081-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A020-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A020-01A-21R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A020-01A-31-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A020-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A020-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A020-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A020-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A020-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A020-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A020-01A-21R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A020-01A-21R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.67.2002.0/TCGA-AG-A020-01A-21D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A020-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A020-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A020-01A-21D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A020-01A-21D-A080-01.seg.txt TCGA-AG-A020-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A020-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A020-01.maf.txt READ-AG-A023-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A023.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A023.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A023.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.4.4.0/TCGA-AG-A023-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A023-01A-21-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A023-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A023-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A023-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A023-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A023-01A-01D-A008-01.seg.txt TCGA-AG-A023-01 /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A023-01A-01R-A00A-07.data.txt READ-AG-A025-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A025.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A025.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A025.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.4.4.0/TCGA-AG-A025-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A025-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A025-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A025-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A025-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A025-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A025-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A025-01A-01D-A008-01.seg.txt TCGA-AG-A025-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A025-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A025-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A025-01A-01R-A00A-07.data.txt READ-AG-A026-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A026.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A026.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A026.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.4.4.0/TCGA-AG-A026-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.1.2.0/TCGA-AG-A026-01A-32D-A081-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A026-01A-32R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A026-01A-32R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A026-01A-41-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.67.2002.0/TCGA-AG-A026-01A-32D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A026-01A-32D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A026-01A-32D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A026-01A-32D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A026-01A-32D-A080-01.seg.txt TCGA-AG-A026-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A026-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A026-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A026-01A-01R-A00A-07.data.txt READ-AG-A02G-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A02G.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A02G.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A02G.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.4.4.0/TCGA-AG-A02G-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A02G-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A02G-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A02G-01A-31-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A02G-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A02G-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A02G-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A02G-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A02G-01A-01D-A008-01.seg.txt TCGA-AG-A02G-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A02G-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A02G-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A02G-01A-01R-A00A-07.data.txt READ-AG-A02N-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A02N.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A02N.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A02N.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.1.2.0/TCGA-AG-A02N-01A-11D-A081-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A02N-01A-11R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A02N-01A-11R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A02N-01A-21-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02N-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02N-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02N-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02N-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02N-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02N-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02N-01A-11R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02N-01A-11R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.67.2002.0/TCGA-AG-A02N-01A-11D-A080-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A02N-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A02N-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A02N-01A-11D-A080-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.67.2002.0/TCGA-AG-A02N-01A-11D-A080-01.seg.txt TCGA-AG-A02N-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A02N-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A02N-01.maf.txt READ-AG-A02X-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A02X.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A02X.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A02X.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.4.4.0/TCGA-AG-A02X-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A02X-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A02X-01A-21R-A076-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A02X-01A-31-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A02X-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A02X-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A02X-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A02X-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A02X-01A-01D-A008-01.seg.txt TCGA-AG-A02X-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A02X-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A02X-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A02X-01A-01R-A00A-07.data.txt READ-AG-A032-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A032.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A032.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.43.20.0/TCGA-AG-A032.clin.txt /xchip/gdac_data/normalized/diced/read/cna__illuminahiseq_dnaseqc__hms_harvard_edu__Level_3__segmentation__seg/hms.harvard.edu_READ.IlluminaHiSeq_DNASeqC.Level_3.1.0.0/TCGA-AG-A032-01A-01D-A077-02.seg.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation27__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation27.Level_3.4.4.0/TCGA-AG-A032-01A-01D-A00B-05.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.43.2002.0/TCGA-AG-A032-01A-01D-A008-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A032-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A032-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A032-01A-01D-A008-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.43.2002.0/TCGA-AG-A032-01A-01D-A008-01.seg.txt TCGA-AG-A032-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A032-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A032-01.maf.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_2__unc_lowess_normalization_probe_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_2.1.1.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt /xchip/gdac_data/normalized/diced/read/transcriptome__agilentg4502a_07_3__unc_edu__Level_3__unc_lowess_normalization_gene_level__data/unc.edu_READ.AgilentG4502A_07_3.Level_3.1.1.0/TCGA-AG-A032-01A-01R-A00A-07.data.txt READ-AG-A036-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A036.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A036.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.67.22.0/TCGA-AG-A036.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.1.2.0/TCGA-AG-A036-01A-12D-A081-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A036-01A-12R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminaga_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaGA_miRNASeq.Level_3.1.0.0/TCGA-AG-A036-01A-12R-A082-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AG-A036-01A-21-A17N-20.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__exon_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A036-01A-12R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__gene_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A036-01A-12R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseq__illuminaga_rnaseq__unc_edu__Level_3__splice_junction_expression__data/unc.edu_READ.IlluminaGA_RNASeq.Level_3.1.2.0/TCGA-AG-A036-01A-12R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__exon_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A036-01A-12R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__junction_quantification__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A036-01A-12R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A036-01A-12R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_genes_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A036-01A-12R-A083-07.data.txt /xchip/gdac_data/normalized/diced/read/rnaseqv2__illuminahiseq_rnaseqv2__unc_edu__Level_3__RSEM_isoforms_normalized__data/unc.edu_READ.IlluminaHiSeq_RNASeqV2.Level_3.1.3.0/TCGA-AG-A036-01A-12R-A083-07.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.67.2002.0/TCGA-AG-A036-01A-12D-A080-01.birdseed.txt TCGA-AG-A036-01 /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Coverage_Calculation__wig/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A036-01.wig.txt /xchip/gdac_data/normalized/diced/read/tracerel__illuminaga_dnaseq__broad_mit_edu__Level_2__Mutation_Calling__maf/broad.mit.edu_READ.IlluminaGA_DNASeq.Level_2.1.0.0/TCGA-AG-A036-01.maf.txt READ-AH-6544-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6544.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6544.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6544.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6544.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6544.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6544.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-AH-6544-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6544-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6544-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AH-6544-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-AH-6544-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6544-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6544-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6544-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6544-01A-11D-1825-01.seg.txt TCGA-AH-6544-01 READ-AH-6547-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6547.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6547.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6547.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6547.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6547.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6547.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-AH-6547-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6547-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6547-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AH-6547-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-AH-6547-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6547-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6547-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6547-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6547-01A-11D-1825-01.seg.txt TCGA-AH-6547-01 READ-AH-6549-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6549.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6549.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6549.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6549.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6549.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6549.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-AH-6549-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6549-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6549-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AH-6549-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-AH-6549-01A-11D-1825-01.birdseed.txt TCGA-AH-6549-01 READ-AH-6643-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6643.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6643.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6643.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6643.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6643.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6643.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-AH-6643-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6643-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6643-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AH-6643-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-AH-6643-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6643-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6643-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6643-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6643-01A-11D-1825-01.seg.txt TCGA-AH-6643-01 READ-AH-6644-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6644.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6644.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-AH-6644.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6644.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6644.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-AH-6644.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-AH-6644-01A-21D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6644-01A-21H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-AH-6644-01A-21H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AH-6644-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-AH-6644-01A-21D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6644-01A-21D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6644-01A-21D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6644-01A-21D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-AH-6644-01A-21D-1825-01.seg.txt TCGA-AH-6644-01 READ-AH-6897-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-AH-6897.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-AH-6897.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-AH-6897.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-AH-6897.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-AH-6897.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-AH-6897.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-AH-6897-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-AH-6897-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-AH-6897-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-AH-6897-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-AH-6897-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-AH-6897-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-AH-6897-01A-11D-1923-01.seg.txt TCGA-AH-6897-01 READ-AH-6903-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-AH-6903.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-AH-6903.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-AH-6903.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-AH-6903.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-AH-6903.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-AH-6903.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-AH-6903-01A-11D-1926-05.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-AH-6903-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-AH-6903-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-AH-6903-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-AH-6903-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-AH-6903-01A-11D-1923-01.seg.txt TCGA-AH-6903-01 READ-BM-6198-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-BM-6198.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-BM-6198.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-BM-6198.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-BM-6198.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-BM-6198.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-BM-6198.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-BM-6198-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-BM-6198-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-BM-6198-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-BM-6198-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-BM-6198-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-BM-6198-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-BM-6198-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-BM-6198-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-BM-6198-01A-11D-1732-01.seg.txt TCGA-BM-6198-01 READ-CI-6619-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6619.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6619.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6619.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6619.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6619.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6619.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-CI-6619-01B-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6619-01B-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6619-01B-11H-1829-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-CI-6619-01B-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6619-01B-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6619-01B-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6619-01B-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6619-01B-11D-1825-01.seg.txt TCGA-CI-6619-01 READ-CI-6620-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6620.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6620.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6620.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6620.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6620.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6620.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-CI-6620-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6620-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6620-01A-11H-1829-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-CI-6620-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6620-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6620-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6620-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6620-01A-11D-1825-01.seg.txt TCGA-CI-6620-01 READ-CI-6621-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6621.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6621.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6621.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6621.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6621.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6621.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-CI-6621-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6621-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6621-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CI-6621-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-CI-6621-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6621-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6621-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6621-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6621-01A-11D-1825-01.seg.txt TCGA-CI-6621-01 READ-CI-6622-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6622.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6622.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6622.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6622.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6622.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6622.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-CI-6622-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6622-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6622-01A-11H-1829-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-CI-6622-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6622-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6622-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6622-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6622-01A-11D-1825-01.seg.txt TCGA-CI-6622-01 READ-CI-6623-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6623.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6623.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6623.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6623.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6623.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6623.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-CI-6623-01B-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6623-01B-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6623-01B-11H-1829-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-CI-6623-01B-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6623-01B-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6623-01B-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6623-01B-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6623-01B-11D-1825-01.seg.txt TCGA-CI-6623-01 READ-CI-6624-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6624.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6624.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-CI-6624.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6624.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6624.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-CI-6624.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-CI-6624-01C-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6624-01C-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CI-6624-01C-11H-1829-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-CI-6624-01C-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6624-01C-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6624-01C-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6624-01C-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-CI-6624-01C-11D-1825-01.seg.txt TCGA-CI-6624-01 READ-CL-4957-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-CL-4957.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-CL-4957.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-CL-4957.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-CL-4957.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-CL-4957.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-CL-4957.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-CL-4957-01A-01D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CL-4957-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CL-4957-01A-01T-1735-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-CL-4957-01A-01D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-CL-4957-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-CL-4957-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-CL-4957-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-CL-4957-01A-01D-1732-01.seg.txt TCGA-CL-4957-01 READ-CL-5917-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-CL-5917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-CL-5917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-CL-5917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-CL-5917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-CL-5917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-CL-5917.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-CL-5917-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CL-5917-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CL-5917-01A-11H-1659-13.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-CL-5917-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-CL-5917-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-CL-5917-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-CL-5917-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-CL-5917-01A-11D-1656-01.seg.txt TCGA-CL-5917-01 READ-CL-5918-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-CL-5918.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-CL-5918.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-CL-5918.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-CL-5918.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-CL-5918.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-CL-5918.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-CL-5918-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CL-5918-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-CL-5918-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-CL-5918-01A-21-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-CL-5918-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-CL-5918-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-CL-5918-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-CL-5918-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-CL-5918-01A-11D-1656-01.seg.txt TCGA-CL-5918-01 READ-DC-4745-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-DC-4745.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-DC-4745.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-DC-4745.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-DC-4745.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-DC-4745.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-DC-4745.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-DC-4745-01A-01D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-4745-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-4745-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-4745-01A-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-DC-4745-01A-01D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-DC-4745-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-DC-4745-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-DC-4745-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-DC-4745-01A-01D-1732-01.seg.txt TCGA-DC-4745-01 READ-DC-4749-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-DC-4749.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-DC-4749.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-DC-4749.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-DC-4749.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-DC-4749.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-DC-4749.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-DC-4749-01A-01D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-4749-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-4749-01A-01T-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-4749-01A-31-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-DC-4749-01A-01D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-DC-4749-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-DC-4749-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-DC-4749-01A-01D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-DC-4749-01A-01D-1732-01.seg.txt TCGA-DC-4749-01 READ-DC-5337-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-5337.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-5337.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-5337.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-5337.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-5337.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-5337.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-DC-5337-01A-01D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-5337-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-5337-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-5337-01A-21-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-DC-5337-01A-01D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-5337-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-5337-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-5337-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-5337-01A-01D-1656-01.seg.txt TCGA-DC-5337-01 READ-DC-5869-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-5869.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-5869.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-5869.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-5869.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-5869.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-5869.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-DC-5869-01A-01D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-5869-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-5869-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-5869-01A-21-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-DC-5869-01A-01D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-5869-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-5869-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-5869-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-5869-01A-01D-1656-01.seg.txt TCGA-DC-5869-01 READ-DC-6154-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-DC-6154.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-DC-6154.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-DC-6154.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-DC-6154.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-DC-6154.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-DC-6154.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-DC-6154-01A-31D-1926-05.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-DC-6154-01A-31D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-DC-6154-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-DC-6154-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-DC-6154-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-DC-6154-01A-31D-1923-01.seg.txt TCGA-DC-6154-01 READ-DC-6155-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6155.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6155.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6155.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6155.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6155.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6155.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-DC-6155-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6155-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6155-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-6155-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-DC-6155-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6155-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6155-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6155-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6155-01A-11D-1656-01.seg.txt TCGA-DC-6155-01 READ-DC-6156-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6156.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6156.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6156.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6156.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6156.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6156.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-DC-6156-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6156-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6156-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-6156-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-DC-6156-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6156-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6156-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6156-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6156-01A-11D-1656-01.seg.txt TCGA-DC-6156-01 READ-DC-6157-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6157.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6157.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6157.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6157.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6157.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6157.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-DC-6157-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6157-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6157-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-6157-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-DC-6157-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6157-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6157-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6157-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6157-01A-11D-1656-01.seg.txt TCGA-DC-6157-01 READ-DC-6158-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6158.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6158.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6158.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6158.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6158.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6158.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-DC-6158-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6158-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6158-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-6158-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-DC-6158-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6158-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6158-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6158-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6158-01A-11D-1656-01.seg.txt TCGA-DC-6158-01 READ-DC-6160-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6160.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6160.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-DC-6160.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6160.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6160.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-DC-6160.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-DC-6160-01A-11D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6160-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6160-01A-11H-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-6160-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-DC-6160-01A-11D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6160-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6160-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6160-01A-11D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-DC-6160-01A-11D-1656-01.seg.txt TCGA-DC-6160-01 READ-DC-6681-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6681.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6681.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6681.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6681.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6681.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6681.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-DC-6681-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6681-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6681-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-6681-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-DC-6681-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6681-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6681-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6681-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6681-01A-11D-1825-01.seg.txt TCGA-DC-6681-01 READ-DC-6682-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6682.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6682.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6682.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6682.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6682.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6682.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-DC-6682-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6682-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6682-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-6682-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-DC-6682-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6682-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6682-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6682-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6682-01A-11D-1825-01.seg.txt TCGA-DC-6682-01 READ-DC-6683-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6683.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6683.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DC-6683.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6683.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6683.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DC-6683.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-DC-6683-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6683-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DC-6683-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DC-6683-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-DC-6683-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6683-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6683-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6683-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DC-6683-01A-11D-1825-01.seg.txt TCGA-DC-6683-01 READ-DT-5265-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DT-5265.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DT-5265.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-DT-5265.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DT-5265.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DT-5265.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-DT-5265.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-DT-5265-01A-21D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DT-5265-01A-21H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DT-5265-01A-21H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DT-5265-01A-22-1933-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-DT-5265-01A-21D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DT-5265-01A-21D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DT-5265-01A-21D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DT-5265-01A-21D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-DT-5265-01A-21D-1825-01.seg.txt TCGA-DT-5265-01 READ-DY-A0XA-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A0XA.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A0XA.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A0XA.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.4.2.0/TCGA-DY-A0XA-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A0XA-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A0XA-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DY-A0XA-01A-21-A17N-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.133.2002.0/TCGA-DY-A0XA-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A0XA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A0XA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A0XA-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A0XA-01A-11D-A151-01.seg.txt TCGA-DY-A0XA-01 READ-DY-A1DC-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DC.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DC.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DC.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.4.2.0/TCGA-DY-A1DC-01A-31D-A153-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DC-01A-31H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DC-01A-31H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DY-A1DC-01A-21-A17N-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.133.2002.0/TCGA-DY-A1DC-01A-31D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DC-01A-31D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DC-01A-31D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DC-01A-31D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DC-01A-31D-A151-01.seg.txt TCGA-DY-A1DC-01 READ-DY-A1DD-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DD.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DD.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DD.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.4.2.0/TCGA-DY-A1DD-01A-21D-A153-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DD-01A-21H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DD-01A-21H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DY-A1DD-01A-11-A17N-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.133.2002.0/TCGA-DY-A1DD-01A-21D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DD-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DD-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DD-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DD-01A-21D-A151-01.seg.txt TCGA-DY-A1DD-01 READ-DY-A1DE-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DE.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DE.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DE.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.4.2.0/TCGA-DY-A1DE-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DE-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DE-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DY-A1DE-01A-21-A17N-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.133.2002.0/TCGA-DY-A1DE-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DE-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DE-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DE-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DE-01A-11D-A151-01.seg.txt TCGA-DY-A1DE-01 READ-DY-A1DF-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DF.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DF.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DF.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.4.2.0/TCGA-DY-A1DF-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DF-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DF-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DY-A1DF-01A-21-A17N-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.133.2002.0/TCGA-DY-A1DF-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DF-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DF-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DF-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DF-01A-11D-A151-01.seg.txt TCGA-DY-A1DF-01 READ-DY-A1DG-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DG.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DG.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1DG.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.4.2.0/TCGA-DY-A1DG-01A-11D-A153-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DG-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1DG-01A-11H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DY-A1DG-01A-21-A17N-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.133.2002.0/TCGA-DY-A1DG-01A-11D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DG-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DG-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DG-01A-11D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1DG-01A-11D-A151-01.seg.txt TCGA-DY-A1DG-01 READ-DY-A1H8-TP /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1H8.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1H8.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.133.16.0/TCGA-DY-A1H8.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.4.2.0/TCGA-DY-A1H8-01A-21D-A153-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1H8-01A-21H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-DY-A1H8-01A-21H-A154-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-DY-A1H8-01A-31-A17N-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.133.2002.0/TCGA-DY-A1H8-01A-21D-A151-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1H8-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1H8-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1H8-01A-21D-A151-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.133.2002.0/TCGA-DY-A1H8-01A-21D-A151-01.seg.txt TCGA-DY-A1H8-01 READ-EF-5830-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-EF-5830.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-EF-5830.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-EF-5830.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-EF-5830.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-EF-5830.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-EF-5830.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-EF-5830-01A-01D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EF-5830-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EF-5830-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EF-5830-01A-21-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-EF-5830-01A-01D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-EF-5830-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-EF-5830-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-EF-5830-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-EF-5830-01A-01D-1656-01.seg.txt TCGA-EF-5830-01 READ-EF-5831-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-EF-5831.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-EF-5831.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.102.12.0/TCGA-EF-5831.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-EF-5831.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-EF-5831.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.102.13.0/TCGA-EF-5831.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.2.2.0/TCGA-EF-5831-01A-01D-1658-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EF-5831-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EF-5831-01A-01T-1659-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EF-5831-01A-21-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.102.2002.0/TCGA-EF-5831-01A-01D-1656-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-EF-5831-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-EF-5831-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-EF-5831-01A-01D-1656-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.102.2002.0/TCGA-EF-5831-01A-01D-1656-01.seg.txt TCGA-EF-5831-01 READ-EI-6506-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6506.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6506.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6506.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6506.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6506.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6506.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6506-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6506-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6506-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6506-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6506-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6506-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6506-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6506-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6506-01A-11D-1732-01.seg.txt TCGA-EI-6506-01 READ-EI-6507-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6507.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6507.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6507.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6507.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6507.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6507.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6507-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6507-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6507-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6507-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6507-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6507-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6507-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6507-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6507-01A-11D-1732-01.seg.txt TCGA-EI-6507-01 READ-EI-6508-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6508.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6508.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6508.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6508.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6508.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6508.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6508-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6508-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6508-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6508-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6508-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6508-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6508-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6508-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6508-01A-11D-1732-01.seg.txt TCGA-EI-6508-01 READ-EI-6509-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6509.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6509.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6509.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6509.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6509.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6509.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6509-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6509-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6509-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6509-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6509-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6509-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6509-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6509-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6509-01A-11D-1732-01.seg.txt TCGA-EI-6509-01 READ-EI-6510-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6510.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6510.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6510.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6510.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6510.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6510.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6510-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6510-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6510-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6510-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6510-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6510-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6510-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6510-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6510-01A-11D-1732-01.seg.txt TCGA-EI-6510-01 READ-EI-6511-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6511.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6511.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6511.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6511.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6511.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6511.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6511-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6511-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6511-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6511-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6511-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6511-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6511-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6511-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6511-01A-11D-1732-01.seg.txt TCGA-EI-6511-01 READ-EI-6512-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6512.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6512.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6512.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6512.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6512.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6512.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6512-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6512-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6512-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6512-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6512-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6512-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6512-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6512-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6512-01A-11D-1732-01.seg.txt TCGA-EI-6512-01 READ-EI-6513-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6513.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6513.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6513.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6513.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6513.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6513.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6513-01A-21D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6513-01A-21H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6513-01A-21H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6513-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6513-01A-21D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6513-01A-21D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6513-01A-21D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6513-01A-21D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6513-01A-21D-1732-01.seg.txt TCGA-EI-6513-01 READ-EI-6514-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6514.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6514.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-EI-6514.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6514.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6514.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-EI-6514.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-EI-6514-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6514-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-EI-6514-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6514-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-EI-6514-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6514-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6514-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6514-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-EI-6514-01A-11D-1732-01.seg.txt TCGA-EI-6514-01 READ-EI-6881-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6881.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6881.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6881.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6881.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6881.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6881.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-EI-6881-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6881-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-EI-6881-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6881-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6881-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6881-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6881-01A-11D-1923-01.seg.txt TCGA-EI-6881-01 READ-EI-6882-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6882.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6882.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-EI-6882-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6882-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-EI-6882-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6882-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6882-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6882-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6882-01A-11D-1923-01.seg.txt TCGA-EI-6882-01 READ-EI-6883-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6883.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6883.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-EI-6883-01A-31D-1926-05.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-EI-6883-01A-31D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6883-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6883-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6883-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6883-01A-31D-1923-01.seg.txt TCGA-EI-6883-01 READ-EI-6884-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6884.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6884.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6884.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6884.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6884.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6884.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-EI-6884-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6884-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-EI-6884-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6884-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6884-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6884-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6884-01A-11D-1923-01.seg.txt TCGA-EI-6884-01 READ-EI-6885-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6885.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6885.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-EI-6885-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6885-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-EI-6885-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6885-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6885-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6885-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6885-01A-11D-1923-01.seg.txt TCGA-EI-6885-01 READ-EI-6917-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-6917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6917.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-6917.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-EI-6917-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-EI-6917-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-EI-6917-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6917-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6917-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6917-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-6917-01A-11D-1923-01.seg.txt TCGA-EI-6917-01 READ-EI-7002-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-7002.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-7002.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-7002.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-7002.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-7002.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-7002.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-EI-7002-01A-11D-1926-05.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-EI-7002-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-7002-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-7002-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-7002-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-7002-01A-11D-1923-01.seg.txt TCGA-EI-7002-01 READ-EI-7004-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-7004.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-7004.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-EI-7004.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-7004.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-7004.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-EI-7004.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-EI-7004-01A-11D-1926-05.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-EI-7004-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-7004-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-7004-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-7004-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-EI-7004-01A-11D-1923-01.seg.txt TCGA-EI-7004-01 READ-F5-6464-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-F5-6464.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-F5-6464.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-F5-6464.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-F5-6464.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-F5-6464.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-F5-6464.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-F5-6464-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6464-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6464-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6464-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-F5-6464-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-F5-6464-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-F5-6464-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-F5-6464-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-F5-6464-01A-11D-1732-01.seg.txt TCGA-F5-6464-01 READ-F5-6465-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-F5-6465.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-F5-6465.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-F5-6465.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-F5-6465.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-F5-6465.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-F5-6465.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-F5-6465-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6465-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6465-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6465-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-F5-6465-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-F5-6465-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-F5-6465-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-F5-6465-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-F5-6465-01A-11D-1732-01.seg.txt TCGA-F5-6465-01 READ-F5-6571-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6571.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6571.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6571.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6571.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6571.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6571.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-F5-6571-01A-12D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6571-01A-12H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6571-01A-12H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6571-01A-23-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-F5-6571-01A-12D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6571-01A-12D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6571-01A-12D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6571-01A-12D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6571-01A-12D-1825-01.seg.txt TCGA-F5-6571-01 READ-F5-6702-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6702.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6702.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6702.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6702.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6702.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6702.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-F5-6702-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6702-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6702-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6702-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-F5-6702-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6702-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6702-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6702-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6702-01A-11D-1825-01.seg.txt TCGA-F5-6702-01 READ-F5-6810-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6810.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6810.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6810.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6810.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6810.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6810.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-F5-6810-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6810-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6810-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6810-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-F5-6810-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6810-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6810-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6810-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6810-01A-11D-1825-01.seg.txt TCGA-F5-6810-01 READ-F5-6811-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6811.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6811.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6811.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6811.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6811.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6811.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-F5-6811-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6811-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6811-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6811-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-F5-6811-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6811-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6811-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6811-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6811-01A-11D-1825-01.seg.txt TCGA-F5-6811-01 READ-F5-6812-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6812.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6812.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6812.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6812.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6812.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6812.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-F5-6812-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6812-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6812-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6812-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-F5-6812-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6812-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6812-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6812-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6812-01A-11D-1825-01.seg.txt TCGA-F5-6812-01 READ-F5-6813-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6813.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6813.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-F5-6813.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6813.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6813.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-F5-6813.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-F5-6813-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6813-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-F5-6813-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6813-01A-13-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-F5-6813-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6813-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6813-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6813-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-F5-6813-01A-11D-1825-01.seg.txt TCGA-F5-6813-01 READ-F5-6814-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6814.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6814.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6814.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6814.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6814.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6814.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-F5-6814-01A-31D-1926-05.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-F5-6814-01A-31D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6814-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6814-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6814-01A-31D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6814-01A-31D-1923-01.seg.txt TCGA-F5-6814-01 READ-F5-6861-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6861.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6861.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6861.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6861.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6861.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6861.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-F5-6861-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6861-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-F5-6861-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6861-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6861-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6861-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6861-01A-11D-1923-01.seg.txt TCGA-F5-6861-01 READ-F5-6863-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6863.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6863.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6863.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6863.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6863.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6863.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-F5-6863-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6863-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-F5-6863-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6863-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6863-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6863-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6863-01A-11D-1923-01.seg.txt TCGA-F5-6863-01 READ-F5-6864-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6864.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6864.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.158.10.0/TCGA-F5-6864.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6864.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6864.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.158.11.0/TCGA-F5-6864.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.6.2.0/TCGA-F5-6864-01A-11D-1926-05.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-F5-6864-01A-13-1936-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.158.2002.0/TCGA-F5-6864-01A-11D-1923-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6864-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6864-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6864-01A-11D-1923-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.158.2002.0/TCGA-F5-6864-01A-11D-1923-01.seg.txt TCGA-F5-6864-01 READ-G5-6233-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-G5-6233.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-G5-6233.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-G5-6233.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-G5-6233.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-G5-6233.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-G5-6233.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-G5-6233-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-G5-6233-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-G5-6233-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G5-6233-01A-23-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-G5-6233-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-G5-6233-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-G5-6233-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-G5-6233-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-G5-6233-01A-11D-1732-01.seg.txt TCGA-G5-6233-01 READ-G5-6235-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-G5-6235.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-G5-6235.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.122.10.0/TCGA-G5-6235.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-G5-6235.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-G5-6235.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.122.11.0/TCGA-G5-6235.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.3.2.0/TCGA-G5-6235-01A-11D-1734-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-G5-6235-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-G5-6235-01A-11H-1735-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G5-6235-01A-13-1934-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.122.2002.0/TCGA-G5-6235-01A-11D-1732-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-G5-6235-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-G5-6235-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-G5-6235-01A-11D-1732-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.122.2002.0/TCGA-G5-6235-01A-11D-1732-01.seg.txt TCGA-G5-6235-01 READ-G5-6572-TP /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__auxiliary__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-G5-6572.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__biospecimen__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-G5-6572.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__intgen_org__Level_1__clinical__clin/intgen.org_READ.bio.Level_1.139.13.0/TCGA-G5-6572.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-G5-6572.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-G5-6572.clin.txt /xchip/gdac_data/normalized/diced/read/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_READ.bio.Level_1.139.14.0/TCGA-G5-6572.clin.txt /xchip/gdac_data/normalized/diced/read/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_READ.HumanMethylation450.Level_3.5.2.0/TCGA-G5-6572-01A-11D-1828-05.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-G5-6572-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_READ.IlluminaHiSeq_miRNASeq.Level_3.1.0.0/TCGA-G5-6572-01A-11H-1829-13.data.txt /xchip/gdac_data/normalized/diced/read/protein_exp__mda_rppa_core__mdanderson_org__Level_3__protein_normalization__data/mdanderson.org_READ.MDA_RPPA_Core.Level_3.1.0.0/TCGA-G5-6572-01A-23-1935-20.data.txt TP /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_2.139.2002.0/TCGA-G5-6572-01A-11D-1825-01.birdseed.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-G5-6572-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-G5-6572-01A-11D-1825-01.seg.txt /xchip/gdac_data/normalized/diced/read/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_READ.Genome_Wide_SNP_6.Level_3.139.2002.0/TCGA-G5-6572-01A-11D-1825-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-A5-A2K3-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-A5-A2K3-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-A5-A2K3-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-A5-A2K3-01A-11D-A17U-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.178.2002.0/TCGA-AJ-A2QM-01A-11D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-AJ-A2QM-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-AJ-A2QM-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-AJ-A2QM-01A-11D-A18N-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.178.2002.0/TCGA-AJ-A2QO-01A-11D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-AJ-A2QO-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-AJ-A2QO-01A-11D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-AJ-A2QO-01A-11D-A18N-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.201.2002.0/TCGA-AJ-A3BF-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3BF-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3BF-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3BF-01A-11D-A20R-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-AJ-A3BH-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3BH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3BH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3BH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3BH-01A-11D-A19X-01.seg.txt TCGA-AJ-A3BH-01 UCEC-AJ-A3BI-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AJ-A3BI.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AJ-A3BI.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.16.3.0/TCGA-AJ-A3BI-01A-11D-A212-05.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-AJ-A3BK-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3BK-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3BK-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3BK-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3BK-01A-11D-A19X-01.seg.txt TCGA-AJ-A3BK-01 UCEC-AJ-A3EJ-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-AJ-A3EJ.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-AJ-A3EJ.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-AJ-A3EJ-01A-11D-A19Z-05.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-AJ-A3EK-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3EK-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3EK-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3EK-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-AJ-A3EK-01A-11D-A19X-01.seg.txt TCGA-AJ-A3EK-01 UCEC-AJ-A3EL-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AJ-A3EL.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AJ-A3EL.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.16.3.0/TCGA-AJ-A3EL-01A-11D-A212-05.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3EL-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3EL-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3EL-01A-11D-A20R-01.seg.txt TCGA-AJ-A3EL-01 UCEC-AJ-A3EM-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AJ-A3EM.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.201.2002.0/TCGA-AJ-A3EM-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3EM-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3EM-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3EM-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3EM-01A-11D-A20R-01.seg.txt TCGA-AJ-A3EM-01 UCEC-AJ-A3I9-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3I9.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3I9.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AJ-A3I9-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AJ-A3I9-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AJ-A3I9-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AJ-A3I9-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3I9-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3I9-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3I9-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3I9-01A-11D-A227-01.seg.txt TCGA-AJ-A3I9-01 UCEC-AJ-A3IA-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AJ-A3IA.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.201.2002.0/TCGA-AJ-A3IA-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3IA-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3IA-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3IA-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AJ-A3IA-01A-11D-A20R-01.seg.txt TCGA-AJ-A3IA-01 UCEC-AJ-A3NC-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3NC.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3NC.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AJ-A3NC-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AJ-A3NC-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AJ-A3NC-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AJ-A3NC-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NC-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NC-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NC-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NC-01A-11D-A227-01.seg.txt TCGA-AJ-A3NC-01 UCEC-AJ-A3NE-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3NE.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AJ-A3NE-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NE-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NE-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NE-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NE-01A-11D-A227-01.seg.txt TCGA-AJ-A3NE-01 UCEC-AJ-A3NF-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3NF.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3NF.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AJ-A3NF-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AJ-A3NF-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AJ-A3NF-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AJ-A3NF-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NF-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NF-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NF-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NF-01A-11D-A227-01.seg.txt TCGA-AJ-A3NF-01 UCEC-AJ-A3NG-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3NG.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AJ-A3NG-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NG-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NG-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NG-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NG-01A-11D-A227-01.seg.txt TCGA-AJ-A3NG-01 UCEC-AJ-A3NH-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3NH.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3NH.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AJ-A3NH-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AJ-A3NH-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AJ-A3NH-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AJ-A3NH-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NH-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NH-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NH-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3NH-01A-11D-A227-01.seg.txt TCGA-AJ-A3NH-01 UCEC-AJ-A3OJ-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AJ-A3OJ.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AJ-A3OJ-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3OJ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3OJ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AJ-A3OJ-01A-11D-A227-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-AX-A2IO.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-AX-A2IO.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-AX-A2IO.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.13.3.0/TCGA-AX-A2IO-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A2IO-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A2IO-01A-11R-A17X-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-AX-A2IO-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-AX-A2IO-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-AX-A2IO-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-AX-A2IO-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-AX-A2IO-01A-11D-A17U-01.seg.txt TCGA-AX-A2IO-01 UCEC-AX-A3FS-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FS.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FS.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AX-A3FS-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FS-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FS-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AX-A3FS-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FS-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FS-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FS-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FS-01A-11D-A227-01.seg.txt TCGA-AX-A3FS-01 UCEC-AX-A3FT-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FT.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FT.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AX-A3FT-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FT-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FT-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AX-A3FT-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FT-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FT-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FT-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FT-01A-11D-A227-01.seg.txt TCGA-AX-A3FT-01 UCEC-AX-A3FV-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FV.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AX-A3FV-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FV-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FV-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AX-A3FV-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FV-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FV-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FV-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FV-01A-11D-A227-01.seg.txt TCGA-AX-A3FV-01 UCEC-AX-A3FW-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FW.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FW.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AX-A3FW-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FW-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FW-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AX-A3FW-01A-11D-A227-01.birdseed.txt 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/xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FX.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FX.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AX-A3FX-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FX-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FX-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AX-A3FX-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FX-01A-11D-A227-01.seg.txt TCGA-AX-A3FX-01 UCEC-AX-A3FZ-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FZ.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3FZ.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AX-A3FZ-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FZ-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-AX-A3FZ-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AX-A3FZ-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FZ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FZ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FZ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3FZ-01A-11D-A227-01.seg.txt TCGA-AX-A3FZ-01 UCEC-AX-A3G1-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3G1.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AX-A3G1-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3G1-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3G1-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3G1-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3G1-01A-11D-A227-01.seg.txt TCGA-AX-A3G1-01 UCEC-AX-A3G3-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AX-A3G3.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AX-A3G3.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.16.3.0/TCGA-AX-A3G3-01A-11D-A212-05.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G3-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G3-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G3-01A-11D-A20R-01.seg.txt TCGA-AX-A3G3-01 UCEC-AX-A3G4-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AX-A3G4.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.201.2002.0/TCGA-AX-A3G4-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G4-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G4-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G4-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G4-01A-11D-A20R-01.seg.txt TCGA-AX-A3G4-01 UCEC-AX-A3G6-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AX-A3G6.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AX-A3G6.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.16.3.0/TCGA-AX-A3G6-01A-11D-A212-05.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G6-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G6-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-AX-A3G6-01A-11D-A20R-01.seg.txt TCGA-AX-A3G6-01 UCEC-AX-A3G7-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-AX-A3G7.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-AX-A3G8-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3G8-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3G8-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3G8-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-AX-A3G8-01A-11D-A227-01.seg.txt TCGA-AX-A3G8-01 UCEC-AX-A3G9-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3G9.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-AX-A3G9.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-AX-A3G9-01A-11D-A22B-05.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.118.2002.0/TCGA-B5-A1N2-01A-21D-A141-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.118.2002.0/TCGA-B5-A1N2-01A-21D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.118.2002.0/TCGA-B5-A1N2-01A-21D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.118.2002.0/TCGA-B5-A1N2-01A-21D-A141-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.118.2002.0/TCGA-B5-A1N2-01A-21D-A141-01.seg.txt TCGA-B5-A1N2-01 UCEC-B5-A3F9-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-B5-A3F9.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-B5-A3F9-01A-21D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3F9-01A-21R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3F9-01A-21R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-B5-A3F9-01A-21D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-B5-A3F9-01A-21D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-B5-A3F9-01A-21D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-B5-A3F9-01A-21D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-B5-A3F9-01A-21D-A227-01.seg.txt TCGA-B5-A3F9-01 UCEC-B5-A3FA-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-B5-A3FA.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-B5-A3FA-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FA-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FA-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-B5-A3FA-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FA-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FA-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FA-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FA-01A-11D-A19X-01.seg.txt TCGA-B5-A3FA-01 UCEC-B5-A3FB-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-B5-A3FB.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-B5-A3FB-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FB-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FB-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-B5-A3FB-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FB-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FB-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FB-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FB-01A-11D-A19X-01.seg.txt TCGA-B5-A3FB-01 UCEC-B5-A3FC-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-B5-A3FC.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-B5-A3FC.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-B5-A3FC-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FC-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FC-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-B5-A3FC-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-B5-A3FC-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-B5-A3FC-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-B5-A3FC-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-B5-A3FC-01A-11D-A227-01.seg.txt TCGA-B5-A3FC-01 UCEC-B5-A3FD-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-B5-A3FD.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-B5-A3FD-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FD-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FD-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-B5-A3FD-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FD-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FD-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FD-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FD-01A-11D-A19X-01.seg.txt TCGA-B5-A3FD-01 UCEC-B5-A3FH-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-B5-A3FH.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-B5-A3FH-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FH-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-B5-A3FH-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-B5-A3FH-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-B5-A3FH-01A-11D-A19X-01.seg.txt TCGA-B5-A3FH-01 UCEC-B5-A3S1-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-B5-A3S1.clin.txt 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/xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A2G7-01A-21R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A2G7-01A-21R-A17X-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-D1-A2G7-01A-21D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-D1-A2G7-01A-21D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-D1-A2G7-01A-21D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-D1-A2G7-01A-21D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-D1-A2G7-01A-21D-A17U-01.seg.txt TCGA-D1-A2G7-01 UCEC-D1-A3DA-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-D1-A3DA.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.201.12.0/TCGA-D1-A3DA.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.16.3.0/TCGA-D1-A3DA-01A-12D-A212-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3DA-01A-12R-A214-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3DA-01A-12R-A214-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.201.2002.0/TCGA-D1-A3DA-01A-12D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-D1-A3DA-01A-12D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-D1-A3DA-01A-12D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-D1-A3DA-01A-12D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-D1-A3DA-01A-12D-A20R-01.seg.txt TCGA-D1-A3DA-01 UCEC-D1-A3DG-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-D1-A3DG.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-D1-A3DG.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-D1-A3DG-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3DG-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3DG-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-D1-A3DG-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-D1-A3DG-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-D1-A3DG-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-D1-A3DG-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-D1-A3DG-01A-11D-A19X-01.seg.txt TCGA-D1-A3DG-01 UCEC-D1-A3DH-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-D1-A3DH.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-D1-A3DH.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-D1-A3DH.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-D1-A3DH-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3DH-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3DH-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-D1-A3DH-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-D1-A3DH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-D1-A3DH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-D1-A3DH-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-D1-A3DH-01A-11D-A19X-01.seg.txt TCGA-D1-A3DH-01 UCEC-D1-A3JP-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-D1-A3JP.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-D1-A3JP-01A-31D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3JP-01A-31R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3JP-01A-31R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-D1-A3JP-01A-31D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-D1-A3JP-01A-31D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-D1-A3JP-01A-31D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-D1-A3JP-01A-31D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-D1-A3JP-01A-31D-A227-01.seg.txt TCGA-D1-A3JP-01 UCEC-D1-A3JQ-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-D1-A3JQ.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-D1-A3JQ-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3JQ-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-D1-A3JQ-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-D1-A3JQ-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-D1-A3JQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-D1-A3JQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-D1-A3JQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-D1-A3JQ-01A-11D-A227-01.seg.txt TCGA-D1-A3JQ-01 UCEC-DF-A2KN-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-DF-A2KN.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-DF-A2KN.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.13.3.0/TCGA-DF-A2KN-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-DF-A2KN-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-DF-A2KN-01A-11R-A17X-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-DF-A2KN-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-DF-A2KN-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-DF-A2KN-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-DF-A2KN-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-DF-A2KN-01A-11D-A17U-01.seg.txt TCGA-DF-A2KN-01 UCEC-DF-A2KR-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-DF-A2KR.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-DF-A2KR.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.13.3.0/TCGA-DF-A2KR-01A-11D-A17Z-05.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.201.2002.0/TCGA-DF-A2KZ-01A-11D-A20R-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-DF-A2KZ-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-DF-A2KZ-01A-11D-A20R-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.201.2002.0/TCGA-DF-A2KZ-01A-11D-A20R-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-EO-A22X-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A22X-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A22X-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A22X-01A-11D-A17U-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A22Y-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A22Y-01A-11R-A17X-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-EO-A22Y-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A22Y-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A22Y-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A22Y-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A22Y-01A-11D-A17U-01.seg.txt TCGA-EO-A22Y-01 UCEC-EO-A2CG-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-EO-A2CG.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-EO-A2CG.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-EO-A2CG.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.13.3.0/TCGA-EO-A2CG-01A-12D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A2CG-01A-12R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A2CG-01A-12R-A17X-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-EO-A2CG-01A-12D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A2CG-01A-12D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A2CG-01A-12D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A2CG-01A-12D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A2CG-01A-12D-A17U-01.seg.txt TCGA-EO-A2CG-01 UCEC-EO-A2CH-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-EO-A2CH.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-EO-A2CH.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-EO-A2CH.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.13.3.0/TCGA-EO-A2CH-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A2CH-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A2CH-01A-11R-A17X-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-EO-A2CH-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A2CH-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A2CH-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A2CH-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-EO-A2CH-01A-11D-A17U-01.seg.txt TCGA-EO-A2CH-01 UCEC-EO-A3AS-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-EO-A3AS.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-EO-A3AS-01A-11D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AS-01A-11R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AS-01A-11R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-EO-A3AS-01A-11D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AS-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AS-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AS-01A-11D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AS-01A-11D-A19X-01.seg.txt TCGA-EO-A3AS-01 UCEC-EO-A3AU-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-EO-A3AU.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-EO-A3AU-01A-21D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AU-01A-21R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AU-01A-21R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-EO-A3AU-01A-21D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AU-01A-21D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AU-01A-21D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AU-01A-21D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AU-01A-21D-A19X-01.seg.txt TCGA-EO-A3AU-01 UCEC-EO-A3AV-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-EO-A3AV.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-EO-A3AV-01A-12D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AV-01A-12R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AV-01A-12R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-EO-A3AV-01A-12D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AV-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AV-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AV-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AV-01A-12D-A19X-01.seg.txt TCGA-EO-A3AV-01 UCEC-EO-A3AY-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-EO-A3AY.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-EO-A3AY-01A-12D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AY-01A-12R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AY-01A-12R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-EO-A3AY-01A-12D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AY-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AY-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AY-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AY-01A-12D-A19X-01.seg.txt TCGA-EO-A3AY-01 UCEC-EO-A3AZ-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-EO-A3AZ.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-EO-A3AZ-01A-12D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AZ-01A-12R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3AZ-01A-12R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-EO-A3AZ-01A-12D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AZ-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AZ-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AZ-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3AZ-01A-12D-A19X-01.seg.txt TCGA-EO-A3AZ-01 UCEC-EO-A3B0-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-EO-A3B0.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-EO-A3B0-01A-12D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3B0-01A-12R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3B0-01A-12R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-EO-A3B0-01A-12D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3B0-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3B0-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3B0-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3B0-01A-12D-A19X-01.seg.txt TCGA-EO-A3B0-01 UCEC-EO-A3B1-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.186.16.0/TCGA-EO-A3B1.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.15.3.0/TCGA-EO-A3B1-01A-12D-A19Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3B1-01A-12R-A19V-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3B1-01A-12R-A19V-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.186.2002.0/TCGA-EO-A3B1-01A-12D-A19X-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3B1-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3B1-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3B1-01A-12D-A19X-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.186.2002.0/TCGA-EO-A3B1-01A-12D-A19X-01.seg.txt TCGA-EO-A3B1-01 UCEC-EO-A3KU-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-EO-A3KU.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-EO-A3KU-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3KU-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3KU-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-EO-A3KU-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KU-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KU-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KU-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KU-01A-11D-A227-01.seg.txt TCGA-EO-A3KU-01 UCEC-EO-A3KW-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-EO-A3KW.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-EO-A3KW-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3KW-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3KW-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-EO-A3KW-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KW-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KW-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KW-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KW-01A-11D-A227-01.seg.txt TCGA-EO-A3KW-01 UCEC-EO-A3KX-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-EO-A3KX.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-EO-A3KX-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3KX-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3KX-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-EO-A3KX-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-EO-A3KX-01A-11D-A227-01.seg.txt TCGA-EO-A3KX-01 UCEC-EO-A3L0-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-EO-A3L0.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-EO-A3L0-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-EO-A3L0-01A-11R-A22I-13.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.178.2002.0/TCGA-EY-A2ON-01A-21D-A18N-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-EY-A2ON-01A-21D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-EY-A2ON-01A-21D-A18N-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.178.2002.0/TCGA-EY-A2ON-01A-21D-A18N-01.seg.txt 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/xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-FI-A3PV.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-FI-A3PV-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-FI-A3PV-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-FI-A3PV-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-FI-A3PV-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-FI-A3PV-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-FI-A3PV-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-FI-A3PV-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-FI-A3PV-01A-11D-A227-01.seg.txt TCGA-FI-A3PV-01 UCEC-FI-A3PX-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-FI-A3PX.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-FI-A3PX-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-FI-A3PX-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-FI-A3PX-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-FI-A3PX-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-FI-A3PX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-FI-A3PX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-FI-A3PX-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-FI-A3PX-01A-11D-A227-01.seg.txt TCGA-FI-A3PX-01 UCEC-FL-A1YF-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.143.21.0/TCGA-FL-A1YF.clin.txt TP TCGA-FL-A1YF UCEC-FL-A1YG-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.143.21.0/TCGA-FL-A1YG.clin.txt TP TCGA-FL-A1YG UCEC-FL-A1YH-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.143.21.0/TCGA-FL-A1YH.clin.txt TP TCGA-FL-A1YH UCEC-FL-A1YI-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.143.21.0/TCGA-FL-A1YI.clin.txt TP TCGA-FL-A1YI UCEC-FL-A1YL-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.143.21.0/TCGA-FL-A1YL.clin.txt TP TCGA-FL-A1YL UCEC-FL-A1YM-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.156.21.0/TCGA-FL-A1YM.clin.txt TP TCGA-FL-A1YM UCEC-FL-A1YN-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.156.21.0/TCGA-FL-A1YN.clin.txt TP TCGA-FL-A1YN UCEC-FL-A1YQ-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.156.21.0/TCGA-FL-A1YQ.clin.txt TP TCGA-FL-A1YQ UCEC-FL-A1YT-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.156.21.0/TCGA-FL-A1YT.clin.txt TP TCGA-FL-A1YT UCEC-FL-A1YU-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.156.21.0/TCGA-FL-A1YU.clin.txt TP TCGA-FL-A1YU UCEC-FL-A1YV-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.156.21.0/TCGA-FL-A1YV.clin.txt TP TCGA-FL-A1YV UCEC-FL-A3WE-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-FL-A3WE.clin.txt TP TCGA-FL-A3WE UCEC-H5-A2HR-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__auxiliary__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-H5-A2HR.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-H5-A2HR.clin.txt /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__clinical__clin/nationwidechildrens.org_UCEC.bio.Level_1.168.20.0/TCGA-H5-A2HR.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.13.3.0/TCGA-H5-A2HR-01A-11D-A17Z-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-H5-A2HR-01A-11R-A17X-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-H5-A2HR-01A-11R-A17X-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.168.2002.0/TCGA-H5-A2HR-01A-11D-A17U-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-H5-A2HR-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-H5-A2HR-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-H5-A2HR-01A-11D-A17U-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.168.2002.0/TCGA-H5-A2HR-01A-11D-A17U-01.seg.txt TCGA-H5-A2HR-01 UCEC-K6-A3WQ-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-K6-A3WQ.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-K6-A3WQ-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-K6-A3WQ-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-K6-A3WQ-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-K6-A3WQ-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-K6-A3WQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-K6-A3WQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-K6-A3WQ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-K6-A3WQ-01A-11D-A227-01.seg.txt TCGA-K6-A3WQ-01 UCEC-KJ-A3U4-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-KJ-A3U4.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-KJ-A3U4-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-KJ-A3U4-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-KJ-A3U4-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-KJ-A3U4-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KJ-A3U4-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KJ-A3U4-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KJ-A3U4-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KJ-A3U4-01A-11D-A227-01.seg.txt TCGA-KJ-A3U4-01 UCEC-KP-A3VZ-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-KP-A3VZ.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-KP-A3VZ-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-KP-A3VZ-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-KP-A3VZ-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-KP-A3VZ-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3VZ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3VZ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3VZ-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3VZ-01A-11D-A227-01.seg.txt TCGA-KP-A3VZ-01 UCEC-KP-A3W0-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-KP-A3W0.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-KP-A3W0-01A-21D-A22B-05.data.txt 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/xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-KP-A3W3.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-KP-A3W3-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-KP-A3W3-01A-11R-A22I-13.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_isoform_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-KP-A3W3-01A-11R-A22I-13.data.txt TP /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_2__birdseed_genotype__birdseed/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_2.228.2003.0/TCGA-KP-A3W3-01A-11D-A227-01.birdseed.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3W3-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3W3-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3W3-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3W3-01A-11D-A227-01.seg.txt TCGA-KP-A3W3-01 UCEC-KP-A3W4-TP /xchip/gdac_data/normalized/diced/ucec/clin__bio__nationwidechildrens_org__Level_1__biospecimen__clin/nationwidechildrens.org_UCEC.bio.Level_1.228.5.0/TCGA-KP-A3W4.clin.txt /xchip/gdac_data/normalized/diced/ucec/methylation__humanmethylation450__jhu_usc_edu__Level_3__within_bioassay_data_set_function__data/jhu-usc.edu_UCEC.HumanMethylation450.Level_3.17.3.0/TCGA-KP-A3W4-01A-11D-A22B-05.data.txt /xchip/gdac_data/normalized/diced/ucec/mirnaseq__illuminahiseq_mirnaseq__bcgsc_ca__Level_3__miR_gene_expression__data/bcgsc.ca_UCEC.IlluminaHiSeq_miRNASeq.Level_3.1.3.0/TCGA-KP-A3W4-01A-11R-A22I-13.data.txt 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/xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg18__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3W4-01A-11D-A227-01.seg.txt /xchip/gdac_data/normalized/diced/ucec/snp__genome_wide_snp_6__broad_mit_edu__Level_3__segmented_scna_minus_germline_cnv_hg19__seg/broad.mit.edu_UCEC.Genome_Wide_SNP_6.Level_3.228.2003.0/TCGA-KP-A3W4-01A-11D-A227-01.seg.txt TCGA-KP-A3W4-01