Unique Name Descriptor Wide Peak Limits Peak Limits Region Limits q values Residual q values after removing segments shared with higher peaks Broad or Focal Amplitude Threshold 11LU013_TP 11LU016_TP 11LU022_TP 11LU035_TP C3L-00001_TP C3L-00009_TP C3L-00080_TP C3L-00083_TP C3L-00093_TP C3L-00094_TP C3L-00095_TP C3L-00140_TP C3L-00144_TP C3L-00263_TP C3L-00279_TP C3L-00368_TP C3L-00412_TP C3L-00422_TP C3L-00510_TP C3L-00604_TP C3L-00893_TP C3L-00913_TP C3L-00973_TP C3L-01330_TP C3L-01632_TP C3L-01682_TP C3L-01683_TP C3L-01862_TP C3L-01889_TP C3L-01924_TP C3L-02219_TP C3L-02345_TP C3L-02348_TP C3L-02350_TP C3L-02365_TP C3L-02508_TP C3L-02549_TP C3N-00167_TP C3N-00169_TP C3N-00175_TP C3N-00180_TP C3N-00199_TP C3N-00203_TP C3N-00217_TP C3N-00223_TP C3N-00293_TP C3N-00294_TP C3N-00433_TP C3N-00546_TP C3N-00547_TP C3N-00549_TP C3N-00550_TP C3N-00551_TP C3N-00552_TP C3N-00556_TP C3N-00559_TP C3N-00560_TP C3N-00572_TP C3N-00574_TP C3N-00578_TP C3N-00579_TP C3N-00580_TP C3N-00704_TP C3N-00737_TP C3N-00738_TP C3N-00959_TP C3N-01016_TP C3N-01021_TP C3N-01023_TP C3N-01024_TP C3N-01030_TP C3N-01071_TP C3N-01072_TP C3N-01074_TP C3N-01405_TP C3N-01410_TP C3N-01413_TP C3N-01414_TP C3N-01415_TP C3N-01416_TP C3N-01488_TP C3N-01489_TP C3N-01799_TP C3N-01823_TP C3N-01842_TP C3N-02000_TP C3N-02002_TP C3N-02003_TP C3N-02067_TP C3N-02087_TP C3N-02089_TP C3N-02145_TP C3N-02149_TP C3N-02155_TP C3N-02158_TP C3N-02379_TP C3N-02380_TP C3N-02421_TP C3N-02422_TP C3N-02423_TP C3N-02424_TP C3N-02433_TP C3N-02529_TP C3N-02572_TP C3N-02582_TP C3N-02586_TP C3N-02587_TP C3N-02588_TP C3N-02729_TP Amplification Peak 1 1p34.2 chr1:39800002-42080000(probes 3559:3792) chr1:40260001-40350000(probes 3611:3620) chr1:39810001-40489999(probes 3560:3633) 0.042181 0.042181 0: t<0.1; 1: 0.10.9 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 1 0 1 0 0 0 0 0 1 1 0 0 0 1 0 0 1 0 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 2 0 0 2 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 2 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 Amplification Peak 2 1q21.2 chr1:119990001-156200000(probes 11564:12203) chr1:150200001-150220000(probes 11596:11598) chr1:119990002-165890000(probes 11565:13201) 0.00029134 0.00029134 0: t<0.1; 1: 0.10.9 1 1 1 1 1 0 2 0 0 1 1 1 0 0 1 1 1 0 1 1 2 0 1 1 1 1 0 1 1 2 1 1 1 0 1 0 1 1 2 2 1 2 1 2 1 1 1 1 1 1 1 1 1 0 1 1 1 0 0 1 1 1 1 1 1 1 1 2 1 1 1 1 0 1 2 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 0 1 2 1 1 1 1 0 1 0 1 1 0 1 0 0 1 1 Amplification Peak 3 4q12 chr4:54240001-55139999(probes 66660:66759) chr4:54410001-54450000(probes 66679:66683) chr4:54030001-55210000(probes 66634:66769) 0.016569 0.016569 0: t<0.1; 1: 0.10.9 0 0 0 0 0 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 2 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 2 0 0 2 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 1 1 1 0 0 0 0 0 1 1 1 Amplification Peak 4 5p15.33 chr5:1030001-1350000(probes 79412:79422) chr5:1290001-1300000(probes 79414:79415) chr5:1-14300000(probes 79396:80649) 3.272e-06 3.272e-06 0: t<0.1; 1: 0.10.9 1 1 2 2 1 1 2 0 2 1 1 0 2 0 1 2 0 1 0 0 0 1 0 0 1 1 0 0 0 1 2 0 0 1 2 0 0 1 1 2 1 1 1 0 1 1 1 0 1 1 1 0 2 1 0 1 2 0 0 0 1 2 1 1 1 0 0 2 0 1 1 1 0 0 2 1 1 0 2 2 0 1 2 1 2 1 2 0 1 1 1 2 1 0 0 1 1 1 1 1 1 1 1 1 1 2 1 1 0 Amplification Peak 5 5q35.1 chr5:169550001-181538259(probes 95244:96335) chr5:172650001-172790000(probes 95540:95545) chr5:171910002-173150000(probes 95490:95583) 0.083654 0.083654 0: t<0.1; 1: 0.10.9 1 0 0 0 1 0 1 0 1 0 0 0 0 0 0 1 0 1 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 2 0 0 0 0 0 0 0 0 1 0 2 0 0 0 0 1 0 1 1 0 1 1 0 0 0 1 0 1 2 1 1 0 0 1 1 1 2 0 1 2 0 Amplification Peak 6 6p21.1 chr6:41530002-42000000(probes 100218:100273) chr6:41650001-41660000(probes 100233:100234) chr6:41540001-42010000(probes 100219:100275) 0.061477 0.061477 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 0 0 1 1 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 1 0 1 0 1 1 1 0 0 0 0 0 0 1 1 0 0 1 1 0 0 2 0 1 1 0 1 0 0 1 0 0 0 1 1 0 1 0 0 1 0 1 1 0 1 0 1 0 1 0 1 1 1 0 0 0 2 0 1 1 0 2 0 1 0 1 1 1 0 0 0 1 Amplification Peak 7 6q27 chr6:170590001-170805979(probes 112386:112393) chr6:170590002-170805979(probes 112387:112393) chr6:170590002-170805979(probes 112387:112393) 0.21731 0.21731 0: t<0.1; 1: 0.10.9 0 0 1 0 0 0 1 0 0 1 0 1 1 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 1 0 0 0 1 1 1 1 1 0 0 0 1 0 0 1 1 0 1 0 0 1 0 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 1 1 1 1 0 0 0 0 1 1 1 1 1 1 0 1 1 1 0 2 2 0 1 0 Amplification Peak 8 7p11.2 chr7:54680001-55520000(probes 117499:117594) chr7:54970001-55280000(probes 117532:117565) chr7:53070001-56050000(probes 117335:117654) 4.2652e-06 4.2652e-06 0: t<0.1; 1: 0.10.9 2 1 1 1 2 1 1 0 1 0 0 0 1 0 1 0 0 0 0 1 0 0 0 1 0 0 0 0 0 1 2 1 1 0 2 0 0 2 1 1 0 2 1 0 0 0 1 0 1 2 1 2 0 0 1 2 1 0 2 1 1 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 2 1 1 0 0 1 0 2 1 0 1 1 1 1 1 2 0 2 1 1 1 1 1 1 1 1 2 2 0 1 1 Amplification Peak 9 8q13.1 chr8:61600001-80710000(probes 131593:133669) chr8:65370001-65520000(probes 131997:132014) chr8:65190001-145138636(probes 131976:140459) 0.0045481 0.15746 0: t<0.1; 1: 0.10.9 1 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 1 0 0 0 1 0 0 0 0 0 0 1 0 0 2 0 0 0 0 0 0 1 1 2 1 0 0 0 1 1 1 0 1 0 1 1 2 0 1 1 0 2 1 1 0 0 0 1 0 2 1 0 0 1 2 2 0 2 1 1 0 0 1 0 0 1 1 0 1 0 1 0 1 1 0 0 0 1 0 1 1 1 0 0 0 2 0 1 0 Amplification Peak 10 8q24.21 chr8:128150002-128209999(probes 138862:138869) chr8:128160001-128190000(probes 138863:138866) chr8:65190001-145138636(probes 131976:140459) 1.7592e-15 1.5908e-14 0: t<0.1; 1: 0.10.9 2 1 1 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 0 1 2 0 0 2 1 0 0 0 0 1 0 2 0 0 2 0 0 0 0 2 0 0 2 1 2 1 0 0 1 1 1 0 1 0 1 1 1 0 2 1 1 1 1 0 0 0 1 1 0 2 1 1 2 2 2 1 1 2 1 1 0 1 2 0 0 1 1 0 1 0 2 0 1 1 0 2 1 1 0 2 1 1 2 0 2 2 0 1 1 Amplification Peak 11 8q24.3 chr8:144170002-145138636(probes 140452:140459) chr8:144180002-145138636(probes 140453:140459) chr8:65190001-145138636(probes 131976:140459) 1.7033e-09 0.0072783 0: t<0.1; 1: 0.10.9 1 0 1 1 0 1 1 0 0 1 1 1 1 0 1 0 0 0 0 2 2 0 0 1 1 0 0 0 0 1 0 1 0 0 2 0 0 0 0 1 0 0 0 1 2 1 0 0 1 2 1 1 1 1 1 2 2 1 1 1 1 2 1 0 0 0 2 1 0 1 1 1 1 1 2 1 1 2 1 1 0 1 1 0 0 1 1 1 1 0 2 0 1 1 0 0 1 1 0 1 1 1 2 0 2 2 0 1 1 Amplification Peak 12 11q13.3 chr11:68860002-70000000(probes 169010:169133) chr11:69330001-69400000(probes 169063:169070) chr11:68700001-70980000(probes 168988:169247) 0.00014603 0.00014603 0: t<0.1; 1: 0.10.9 0 1 0 1 1 0 2 0 0 0 0 0 1 0 0 0 0 1 0 1 0 1 0 0 0 0 0 0 0 1 1 1 0 0 1 0 0 1 0 1 1 0 1 2 0 0 0 0 0 1 1 1 1 0 0 0 0 0 1 1 0 1 1 0 0 0 1 0 1 1 0 0 0 0 0 2 0 1 1 0 0 0 0 1 0 1 1 2 1 0 1 0 1 0 0 2 0 1 0 1 2 0 0 0 1 0 1 1 1 Amplification Peak 13 12p13.33 chr12:1-789999(probes 175490:175500) chr12:1-780000(probes 175490:175499) chr12:1-800000(probes 175490:175502) 0.13096 0.22803 0: t<0.1; 1: 0.10.9 1 0 0 0 1 0 1 0 0 1 1 1 1 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 1 1 1 0 0 1 1 1 1 1 1 1 1 0 0 0 0 0 0 1 0 0 1 0 1 1 1 1 1 1 0 1 0 0 1 0 1 1 1 0 0 1 0 1 1 1 1 1 0 1 0 1 1 0 0 1 0 1 0 1 Amplification Peak 14 12p11.21 chr12:32300002-32520000(probes 178529:178554) chr12:32310001-32320000(probes 178530:178531) chr12:30950001-32650000(probes 178402:178571) 0.021527 0.0341 0: t<0.1; 1: 0.10.9 1 1 2 0 0 1 0 0 0 1 0 0 0 0 0 2 0 0 2 0 0 1 0 0 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 1 1 0 1 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 2 0 0 0 1 0 1 1 0 0 2 0 0 0 0 1 1 1 1 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 1 Amplification Peak 15 12q15 chr12:69110002-69209999(probes 181917:181927) chr12:69120001-69200000(probes 181918:181926) chr12:62600001-72259999(probes 181193:182256) 8.8401e-09 8.8401e-09 0: t<0.1; 1: 0.10.9 1 0 0 0 2 2 2 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 0 2 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 0 0 2 0 0 0 1 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 0 0 1 1 2 1 0 2 1 0 1 0 0 0 0 1 2 0 0 1 0 0 0 2 0 1 2 1 0 1 0 0 0 0 Amplification Peak 16 13q31.1 chr13:86200002-86280000(probes 196319:196328) chr13:86210001-86260000(probes 196320:196325) chr13:86210001-86300000(probes 196320:196330) 0.045559 0.045559 0: t<0.1; 1: 0.10.9 0 0 0 0 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 1 0 0 1 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 1 1 1 1 0 0 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 1 0 1 1 0 0 0 1 0 0 0 0 1 0 0 1 0 1 1 0 1 0 1 Amplification Peak 17 14q13.3 chr14:36190002-36479999(probes 202573:202613) chr14:36200001-36280000(probes 202574:202583) chr14:27200001-41050000(probes 201521:203111) 4.8825e-20 4.8825e-20 0: t<0.1; 1: 0.10.9 2 2 1 1 1 1 2 0 1 2 1 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 2 0 0 0 1 1 1 1 1 1 0 0 0 0 0 1 0 1 0 0 0 1 1 0 2 1 1 1 2 2 1 0 2 0 2 2 2 1 0 2 2 2 1 0 0 0 0 1 0 2 1 2 2 0 1 1 0 2 2 2 2 1 0 1 1 1 1 0 1 1 1 0 1 1 1 Amplification Peak 18 14q32.33 chr14:105520002-107043718(probes 209556:209574) chr14:105530001-107043718(probes 209557:209574) chr14:105530001-107043718(probes 209557:209574) 0.047232 0.10927 0: t<0.1; 1: 0.10.9 2 0 1 0 0 0 2 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 1 0 1 2 0 2 0 1 0 0 0 1 0 1 1 1 0 1 0 0 1 2 1 0 0 0 1 0 1 1 1 2 0 0 0 0 0 1 1 1 0 0 0 0 0 1 1 1 1 1 0 1 1 1 0 2 1 0 1 0 1 1 0 0 0 1 1 0 1 0 1 Amplification Peak 19 17q23.1 chr17:42270001-83257441(probes 228852:232657) chr17:59850001-59880000(probes 230450:230453) chr17:59560001-61780000(probes 230413:230649) 0.016569 0.016569 0: t<0.1; 1: 0.10.9 0 0 1 1 1 1 1 0 1 1 0 0 1 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 2 1 0 1 0 1 1 0 0 1 1 1 0 0 0 0 0 1 1 0 0 0 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 1 1 1 0 1 0 1 0 1 0 2 1 1 1 0 1 1 1 0 1 1 1 0 1 0 1 1 1 0 1 0 1 1 1 1 0 0 2 1 Amplification Peak 20 19q12 chr19:29620001-29880000(probes 241974:242010) chr19:29760001-29770000(probes 241992:241993) chr19:29030001-29949999(probes 241900:242018) 0.0043776 0.0043776 0: t<0.1; 1: 0.10.9 0 0 0 0 0 1 0 0 2 1 0 0 1 0 1 0 0 0 0 0 0 2 1 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 0 1 0 2 1 0 0 0 0 1 1 1 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 0 2 1 0 0 1 1 0 1 2 0 1 0 0 0 1 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 1 Amplification Peak 21 20p11.21 chr20:22110001-23599999(probes 246859:247011) chr20:22510001-22520000(probes 246905:246906) chr20:22130001-23040000(probes 246862:246963) 0.14019 0.14019 0: t<0.1; 1: 0.10.9 0 0 0 0 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 1 0 1 1 2 0 2 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 0 0 1 2 0 0 1 0 0 1 1 0 1 0 0 0 2 0 0 1 2 0 0 0 0 0 0 0 1 0 1 0 0 0 0 Amplification Peak 22 20q13.2 chr20:53300002-54059999(probes 249688:249774) chr20:53600001-53810000(probes 249722:249743) chr20:52760001-55430000(probes 249623:249941) 0.00041287 0.020081 0: t<0.1; 1: 0.10.9 1 1 1 0 1 0 1 0 0 1 0 0 1 0 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 1 1 1 2 0 0 1 0 0 0 1 0 0 1 0 0 0 1 0 2 1 1 0 1 1 0 0 1 0 2 0 0 1 0 0 1 0 1 1 0 1 0 0 1 0 1 2 1 0 1 0 0 1 1 1 0 1 1 0 1 0 1 2 2 1 1 0 0 0 0 2 1 0 1 0 0 0 2 Amplification Peak 23 20q13.33 chr20:62820002-64444167(probes 250804:250906) chr20:63470001-63480000(probes 250877:250878) chr20:56660001-64444167(probes 250090:250906) 3.3603e-05 0.0072783 0: t<0.1; 1: 0.10.9 1 1 1 0 1 0 1 0 0 1 0 0 1 0 1 0 0 0 1 1 0 0 0 0 2 0 0 0 0 0 1 1 0 1 1 0 0 1 1 0 0 1 0 0 2 0 0 0 0 0 2 1 1 0 1 1 1 1 1 0 2 0 0 1 0 0 1 0 1 1 0 1 0 0 1 0 1 2 1 0 1 0 0 1 1 0 0 1 1 0 1 0 1 1 2 1 1 0 0 0 0 2 0 0 1 0 0 0 2 Amplification Peak 24 21p12 chr21:6780001-6950000(probes 251657:251683) chr21:6810001-6940000(probes 251662:251682) chr21:6740001-6969999(probes 251652:251685) 0.049034 0.049034 0: t<0.1; 1: 0.10.9 0 0 0 0 1 0 1 0 0 0 0 0 0 0 0 0 0 0 0 2 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 1 0 1 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 1 0 0 0 2 1 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 1 0 2 0 0 0 0 2 Amplification Peak 25 Xp22.33 chrX:1-150000(probes 259624:259646) chrX:1-50000(probes 259624:259631) chrX:1-170000(probes 259624:259648) 0.09985 0.09985 0: t<0.1; 1: 0.10.9 1 1 0 0 1 0 0 0 0 1 1 2 1 1 0 0 0 1 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 1 0 0 1 0 0 0 2 1 0 1 1 0 0 0 0 0 1 0 0 0 0 1 0 0 0 1 1 0 1 1 0 1 0 0 0 1 1 1 0 1 1 0 1 0 1 0 1 1 1 0 0 1 1 1 1 1 1 1 1 Amplification Peak 26 Xq27.3 chrX:145300001-155960000(probes 271401:272221) chrX:145990001-146020000(probes 271476:271479) chrX:144170001-156040895(probes 271300:272237) 0.00090283 0.00090283 0: t<0.1; 1: 0.10.9 0 1 1 1 1 1 0 0 0 1 0 0 1 0 1 0 0 1 0 0 2 0 1 1 0 1 0 0 0 0 1 0 0 0 0 0 0 1 1 0 0 2 1 1 0 0 1 0 2 1 1 1 0 0 1 1 1 0 1 1 1 2 0 1 0 0 1 0 1 1 1 0 0 1 0 1 1 1 1 0 0 0 1 0 0 1 1 0 1 0 1 1 0 1 1 1 0 1 1 1 0 0 0 2 1 2 1 1 1 Amplification Peak 27 Yq11.223 chrY:20120002-20180000(probes 274464:274472) chrY:20130001-20170000(probes 274465:274471) chrY:20060001-20319999(probes 274455:274488) 0.026925 0.026925 0: t<0.1; 1: 0.10.9 1 0 0 0 0 0 0 0 0 0 0 2 0 1 0 2 1 0 0 2 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 2 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 2 0 0 0 0 0 0 0 0 1 1 2 0 0 0 0 1 0 0 0 0 0 1 2 1 0 0 1 1 1 Deletion Peak 1 1p13.3 chr1:75610001-119940000(probes 7161:11554) chr1:108840002-109250000(probes 10439:10473) chr1:77440001-149930000(probes 7343:11567) 0.00012528 0.00012528 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 1 0 1 0 0 1 0 0 1 0 1 0 1 1 1 1 0 0 0 1 0 0 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 0 1 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 1 1 1 1 1 0 1 1 0 1 0 1 0 1 1 0 0 0 0 0 1 0 0 0 1 1 1 0 0 0 1 0 0 1 0 1 1 0 1 0 0 0 1 Deletion Peak 2 3p24.1 chr3:1-89510000(probes 43265:51457) chr3:28570001-28799999(probes 45532:45553) chr3:1-61060000(probes 43265:48614) 0.01149 0.011638 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 0 1 1 1 0 0 1 1 0 0 0 1 0 1 1 0 1 0 1 0 1 1 0 0 0 0 0 1 1 0 0 1 0 0 0 1 0 1 1 1 1 0 0 0 0 0 1 1 0 1 0 1 1 1 1 1 0 0 1 1 1 0 0 1 0 0 0 0 0 0 1 0 1 1 1 1 0 0 0 0 0 1 1 0 0 1 0 0 1 1 1 1 0 1 0 0 0 0 1 0 1 1 0 0 1 1 Deletion Peak 3 4q35.2 chr4:187670001-190179999(probes 79360:79388) chr4:187840002-190110000(probes 79378:79379) chr4:187850002-190119999(probes 79379:79380) 0.00030284 0.00030284 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 1 1 0 0 1 0 0 1 0 0 0 0 0 1 1 0 1 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 1 1 0 0 0 1 0 0 0 0 0 1 1 0 0 0 0 0 1 0 0 0 0 1 1 1 1 0 1 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 0 1 1 1 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 0 0 1 Deletion Peak 4 5q15 chr5:44800001-152420000(probes 83527:93454) chr5:97490001-97689999(probes 88159:88177) chr5:83830001-118040000(probes 86712:89968) 0.018625 0.018186 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 0 0 1 1 0 0 1 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 1 0 0 0 1 1 1 1 1 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 1 1 0 1 0 0 1 0 1 1 0 0 1 1 0 1 1 0 0 0 1 0 0 1 0 1 1 0 0 0 0 0 1 1 1 1 0 1 0 0 0 1 0 1 1 0 0 0 0 1 1 Deletion Peak 5 6p11.2 chr6:1-170805979(probes 96336:112393) chr6:57300001-61500000(probes 101894:101898) chr6:57340001-61509999(probes 101898:101899) 0.07778 0.24293 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 1 0 1 0 0 0 1 0 0 0 1 Deletion Peak 6 6q16.3 chr6:74050002-170805979(probes 103160:112393) chr6:104920002-104959999(probes 106106:106109) chr6:64720001-170777486(probes 102232:112389) 5.4305e-06 1.0534e-05 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 1 0 1 0 0 1 1 1 1 1 1 1 0 1 1 0 1 0 0 1 1 1 1 1 0 1 0 0 1 0 1 1 1 1 0 0 0 0 1 1 0 1 1 1 0 1 1 0 1 0 1 1 1 0 0 0 1 1 0 1 0 0 0 1 0 1 0 0 0 1 1 0 0 1 1 1 0 1 1 1 Deletion Peak 7 8p23.1 chr8:1-30999999(probes 126383:128757) chr8:6470002-6570000(probes 126684:126692) chr8:80002-38510000(probes 126393:129521) 3.4868e-07 3.4868e-07 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 0 0 1 1 1 1 0 1 0 1 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 0 0 1 1 1 0 1 1 0 0 1 1 0 0 0 1 1 1 0 0 0 1 0 0 0 1 0 1 1 1 0 1 1 0 1 1 0 0 0 1 1 1 1 1 1 0 0 1 1 1 0 1 0 1 1 1 0 1 1 1 0 1 1 1 1 1 0 0 1 0 1 0 0 1 1 1 1 1 0 0 0 1 Deletion Peak 8 9p23 chr9:7790001-10630000(probes 140958:141198) chr9:8290001-10630000(probes 141000:141198) chr9:40002-29740000(probes 140466:143048) 2.2751e-09 0.0091615 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 0 1 1 1 0 0 1 1 0 0 0 0 1 1 1 1 1 0 1 0 1 1 1 0 1 0 0 1 1 1 0 0 0 0 1 0 0 1 0 0 1 1 0 1 0 0 0 1 1 1 0 0 1 1 1 1 0 0 0 1 0 1 0 0 1 0 1 1 1 0 1 1 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 1 0 1 0 0 1 1 1 1 0 0 1 0 Deletion Peak 9 9p21.3 chr9:21860002-22450000(probes 142274:142348) chr9:21950002-22009999(probes 142288:142295) chr9:40002-29740000(probes 140466:143048) 6.2956e-25 1.3346e-21 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 1 1 1 0 1 1 1 0 1 0 0 1 1 0 1 1 0 1 0 1 1 1 0 1 0 0 1 1 1 0 0 1 1 1 0 0 1 0 1 1 1 0 0 0 0 0 1 1 1 0 1 1 1 1 1 1 0 0 0 0 1 0 0 1 0 1 1 1 0 1 1 0 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 1 0 1 1 1 1 0 1 1 0 1 1 1 1 0 0 0 1 Deletion Peak 10 10q25.1 chr10:50720002-133797422(probes 155216:163098) chr10:107850002-108129999(probes 160704:160709) chr10:106920001-110010000(probes 160607:160891) 0.046324 0.046324 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 0 1 1 0 1 0 0 0 0 0 0 0 1 1 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 1 1 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 1 0 0 0 0 1 0 0 0 0 1 1 0 0 0 0 1 1 0 1 1 0 0 0 0 1 0 1 1 1 1 1 0 1 1 Deletion Peak 11 12p13.1 chr12:30001-133275309(probes 175495:188175) chr12:12810001-14000000(probes 176566:176660) chr12:8150001-20949999(probes 176186:177362) 0.017924 0.018186 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 0 1 0 1 0 1 0 1 0 0 0 1 1 0 1 1 0 1 0 1 0 0 0 0 1 0 1 0 0 1 1 1 1 0 1 1 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 1 0 0 0 0 1 1 1 0 0 1 1 1 1 0 0 1 1 0 0 1 0 1 0 0 0 1 1 1 0 1 0 0 0 1 1 0 0 1 0 Deletion Peak 12 13q11 chr13:1-18870000(probes 188176:190088) chr13:18190001-18240000(probes 190042:190051) chr13:17420001-57519999(probes 189950:193556) 1.3463e-11 1.3463e-11 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 0 1 0 0 1 0 0 0 0 0 0 0 0 1 0 0 1 1 1 0 1 0 0 0 1 0 0 1 0 1 0 1 1 1 1 1 1 1 1 0 0 1 0 1 0 0 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 1 1 1 1 0 1 0 1 1 0 1 1 1 1 0 1 0 1 0 1 1 0 1 1 1 0 0 1 1 1 0 0 1 1 1 0 0 1 1 1 0 1 0 Deletion Peak 13 15q13.1 chr15:1-57490000(probes 209575:214547) chr15:27840001-30850000(probes 212013:212022) chr15:26880001-32880000(probes 211916:212126) 0.066565 0.068141 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 1 0 0 0 1 1 0 1 0 1 1 0 1 1 1 0 0 0 0 0 1 0 0 0 0 1 0 1 0 0 0 0 0 1 1 0 1 0 1 0 0 0 0 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 0 0 1 1 1 1 1 0 0 0 1 1 1 1 1 1 0 0 1 1 1 1 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 1 1 0 1 0 0 1 1 Deletion Peak 14 16q24.3 chr16:76640002-90338345(probes 224054:225085) chr16:89240001-90239527(probes 225068:225074) chr16:88210001-90259290(probes 225044:225076) 0.065971 0.068141 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 0 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 1 1 1 0 0 0 1 0 1 0 0 1 0 0 0 1 1 0 1 0 0 1 0 0 0 0 0 0 0 1 0 1 0 1 0 1 0 0 1 1 0 0 0 1 1 0 1 1 0 0 1 1 0 0 0 1 1 1 1 0 0 1 0 1 0 0 0 1 1 1 1 0 0 0 1 0 1 0 0 1 1 0 0 0 1 0 Deletion Peak 15 17p13.1 chr17:130001-64159999(probes 225105:230892) chr17:7380001-7700000(probes 225692:225721) chr17:110001-22799999(probes 225101:226901) 5.6095e-13 5.6095e-13 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 1 1 0 0 1 0 1 0 1 0 1 1 1 1 1 0 0 1 1 1 1 1 0 0 0 1 1 0 0 1 1 0 0 1 1 1 1 0 1 1 0 1 1 0 1 1 0 1 1 1 1 1 0 1 0 1 1 1 1 0 0 1 1 0 1 1 1 1 1 1 1 0 1 0 1 1 1 1 1 0 1 1 1 0 0 1 0 1 1 1 0 1 1 1 0 1 0 0 1 1 1 0 0 1 1 Deletion Peak 16 18q21.31 chr18:24760002-80373285(probes 234369:239533) chr18:57340001-57380000(probes 237720:237723) chr18:44560001-80287934(probes 236413:239523) 0.02647 0.02729 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 0 1 0 1 0 0 1 0 0 0 0 1 1 0 1 0 1 0 1 0 1 0 1 0 0 0 1 1 0 1 1 1 0 0 1 1 1 1 0 1 0 1 1 0 0 1 1 1 1 1 1 1 1 0 1 1 1 0 1 1 0 0 0 1 0 0 1 1 1 0 0 1 1 1 0 1 1 1 1 0 0 0 1 1 0 1 0 0 1 1 0 1 0 1 1 0 0 1 1 0 0 1 0 0 1 1 Deletion Peak 17 19q13.33 chr19:38620002-58617616(probes 242979:244791) chr19:50090001-50110000(probes 244113:244115) chr19:46640001-50150000(probes 243761:244121) 0.07778 0.07778 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 0 1 0 0 0 0 1 0 0 1 0 0 0 0 1 1 1 0 0 1 0 0 1 0 0 0 1 1 0 0 1 0 1 0 0 1 0 1 0 1 1 0 0 0 0 0 0 0 0 0 1 0 1 1 1 1 0 1 0 1 1 0 1 0 1 0 0 1 0 0 0 0 1 0 1 0 0 0 1 0 0 0 1 1 0 0 1 1 0 1 0 0 1 1 1 0 0 0 1 1 0 1 0 0 0 0 1 Deletion Peak 18 21p11.2 chr21:7820002-8989999(probes 251807:251977) chr21:8430001-8450000(probes 251895:251897) chr21:7870001-13990000(probes 251815:252171) 8.8462e-17 2.0881e-13 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 0 1 1 0 0 1 1 1 1 0 0 1 1 0 1 1 0 1 1 1 0 1 0 1 0 0 1 1 0 0 0 0 1 1 1 1 0 1 0 1 0 0 0 1 0 1 1 1 0 0 1 1 1 0 1 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 1 1 0 1 1 0 0 1 0 0 0 1 1 0 1 1 1 0 1 1 0 1 0 0 0 1 0 0 0 1 1 1 0 1 1 Deletion Peak 19 21q11.2 chr21:9820002-14110000(probes 252098:252187) chr21:10330001-13999999(probes 252168:252172) chr21:7870001-13990000(probes 251815:252171) 7.6084e-09 0.00030284 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 1 0 1 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 0 0 0 0 0 1 0 0 1 0 0 1 0 1 1 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 1 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 Deletion Peak 20 22p11.2 chr22:10960002-16939999(probes 256454:256995) chr22:11890001-11960000(probes 256586:256596) chr22:11640001-12199999(probes 256548:256638) 2.1419e-07 1.9682e-07 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 1 1 1 1 0 0 1 1 0 1 1 0 0 0 0 0 0 1 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 1 0 1 1 0 0 0 1 0 0 1 1 0 0 1 1 0 0 0 0 1 1 0 0 0 0 1 0 1 0 0 1 0 1 0 1 0 1 1 0 1 0 0 0 0 0 1 0 1 1 0 0 1 1 0 0 0 0 0 1 1 0 1 1 0 1 0 0 0 Deletion Peak 21 22q13.32 chr22:43850001-50818468(probes 259119:259623) chr22:48520002-48559999(probes 259580:259582) chr22:43890001-50818468(probes 259123:259623) 0.014225 0.013998 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 1 1 1 0 1 1 0 1 1 0 0 0 0 1 0 0 1 1 0 0 0 1 1 0 0 0 0 0 1 0 1 0 0 1 0 0 1 1 1 0 0 1 1 0 0 1 0 0 1 1 1 0 0 0 1 1 0 0 1 1 1 1 0 0 0 1 0 1 1 1 0 0 1 1 1 0 1 1 0 1 1 0 0 1 1 1 0 1 0 1 1 0 1 1 0 0 1 0 1 0 0 1 1 1 0 0 1 0 Deletion Peak 22 Xp22.33 chrX:1-150909999(probes 259624:271937) chrX:250001-3249999(probes 259660:259661) chrX:1-3269999(probes 259624:259663) 8.0641e-06 8.0641e-06 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 0 0 0 1 0 1 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 0 1 0 1 0 0 0 0 0 1 0 0 1 1 0 0 0 1 0 0 1 0 1 1 0 0 0 1 0 0 0 1 0 0 0 0 0 0 1 0 0 0 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 1 1 0 0 0 0 0 0 1 0 0 0 1 0 0 0 0 0 0 Deletion Peak 23 Xq28 chrX:154570002-155999999(probes 272214:272228) chrX:155670001-155960000(probes 272220:272221) chrX:155670002-155969999(probes 272221:272222) 0.023264 0.023264 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 1 1 0 0 0 0 0 0 0 0 0 1 0 1 1 0 0 1 0 0 0 0 0 0 1 0 0 1 0 1 0 0 1 1 0 1 0 0 0 0 1 1 1 0 1 1 0 0 0 0 0 0 0 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 Deletion Peak 24 Yq11.223 chrY:23190002-23940000(probes 274829:274921) chrY:23200002-23309999(probes 274830:274844) chrY:11870001-26650000(probes 273583:275238) 3.7439e-09 3.6266e-09 0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3 0 0 1 1 0 1 1 1 1 1 0 0 1 0 0 0 0 1 1 0 0 0 1 0 1 1 1 1 1 1 0 0 0 0 1 1 1 1 1 1 1 1 0 0 1 1 0 1 1 1 0 1 1 1 1 1 0 0 1 0 1 1 1 1 1 1 1 1 1 0 1 1 1 1 1 0 1 1 0 1 1 1 0 1 1 0 1 0 0 0 0 1 1 1 0 0 0 1 0 1 1 0 1 1 1 1 0 0 0 Amplification Peak 1 - CN values 1p34.2 chr1:39800002-42080000(probes 3559:3792) chr1:40260001-40350000(probes 3611:3620) chr1:39810001-40489999(probes 3560:3633) 0.042181 0.042181 Actual Copy Change Given -0.27368 -0.068203 0.23858 -0.088591 0.46787 0.033065 0.00017278 -0.010392 0.0060008 -0.20532 0.047566 0 0.033964 -0.0085273 0.14389 -0.052323 -0.1096 -0.44251 0.041876 1.0739 0.003734 0.1498 0.014256 0.70833 -0.35247 0.094484 -0.013285 0.0014379 0.0093645 0.11052 0.22706 -0.18429 0.0060439 -0.015516 0.45997 5.2693e-05 0.00098702 0.82034 -0.065375 0.13935 0.040007 0.24593 -0.096902 0.33358 0.0015014 0.0034441 0.021653 -0.031946 0.035466 0 -0.5346 -0.10256 0.0079404 0.018371 -0.12041 0.1182 0.041763 0.024489 0.0040476 0.1857 0.30559 -0.036405 0.088354 2.74 0.040042 -0.001295 3.6569 0.36271 -0.25722 -0.14315 -0.22055 -0.11535 0.010619 0.030315 0.011206 -0.30681 0.034902 -0.23063 0.096694 0.12863 -0.14781 -0.0028328 -0.032979 -0.081325 0.013808 0.065431 0.42269 -0.067918 0.07081 0.081559 0.054162 0.5328 2.0563 0.0211 0.26196 0 0.24623 -0.027334 -0.0063529 -0.15304 -0.037569 0.32889 0.092757 0.092253 -0.062571 0.00078895 -0.0020922 0.0016583 0.0023319 Amplification Peak 2 - CN values 1q21.2 chr1:119990001-156200000(probes 11564:12203) chr1:150200001-150220000(probes 11596:11598) chr1:119990002-165890000(probes 11565:13201) 0.00029134 0.00029134 Actual Copy Change Given 0.19659 0.26606 0.40444 0.12506 0.4845 0.031918 1.0711 0.066202 0.071984 0.63115 0.19921 0.36394 0.070342 -0.0031046 0.32906 0.86466 0.12271 -0.42207 0.79456 0.83213 1.2933 0.011806 0.15596 0.25359 0.63022 0.10201 0.033768 0.68258 0.53491 1.118 0.17157 0.28975 0.39828 0.040249 0.75064 0.00146 0.15845 0.43169 1.5319 1.297 0.36215 1.2599 0.61948 1.7345 0.11211 0.44297 0.82848 0.19532 0.2116 0.80283 0.44081 0.12328 0.2721 0.024277 0.4562 0.54141 0.37283 0.036324 0.035782 0.15278 0.37575 0.82012 0.47631 0.70168 0.24545 0.34852 0.78123 1.0082 0.49427 0.54642 0.73548 0.69183 -0.0050345 0.102 1.7569 0.68564 0.8363 0.68644 0.22778 0.5794 0.57535 0.2853 0.23867 0.16965 0.48233 0.32954 0.53636 -0.071106 0.61446 0.22409 0.50584 0.029032 0.16663 1.125 0.27242 0.18669 0.66785 0.71752 0 0.61611 -0.016748 0.33201 0.47134 0.09783 0.26953 0.0046785 0.0031736 0.34281 0.39811 Amplification Peak 3 - CN values 4q12 chr4:54240001-55139999(probes 66660:66759) chr4:54410001-54450000(probes 66679:66683) chr4:54030001-55210000(probes 66634:66769) 0.016569 0.016569 Actual Copy Change Given 0.041798 -0.020956 0.011377 0.036451 0 0.69184 1.7973 -0.010872 -0.00019875 -0.046325 0.08764 -0.0031524 -0.00012948 0.014763 0.0016614 0.0012792 -0.00074753 0.002481 -0.0044637 0.083207 -0.018584 -0.14796 0 0.17313 -0.095126 0 0.0023308 -0.0096618 -0.0016838 -0.12302 -0.054958 0 -0.0038317 -0.036545 0.58045 -0.00072471 0.0017494 -0.040896 0.05143 -0.095548 0.058565 -0.45586 0.036879 -0.025165 -0.011638 -0.0054599 -0.0079965 0.009914 -0.032422 -0.23289 0 0.0034828 -0.032563 -0.0091835 0.055085 -0.39189 0.6006 -0.29396 -0.24088 0.1571 -0.00098257 1.2667 0.064668 -0.097924 -0.1448 -0.0036231 -0.26932 -0.021869 0.056869 0.13257 0.0028567 -0.076862 0.050491 0.34157 0.44209 -0.001916 -0.086433 -0.0040304 3.6569 -0.19957 -0.0070985 3.4546 -0.058693 -0.10459 -0.46066 -0.079979 -0.39837 -0.099694 0.21869 0.096741 -0.16736 0.014727 -0.16612 -0.041134 0 0.40944 0.02419 -0.0022463 0.58403 0.12403 0.2104 0.018148 0.023565 0.086358 -0.11467 -0.0066418 0.48258 0.21129 0.39912 Amplification Peak 4 - CN values 5p15.33 chr5:1030001-1350000(probes 79412:79422) chr5:1290001-1300000(probes 79414:79415) chr5:1-14300000(probes 79396:80649) 3.272e-06 3.272e-06 Actual Copy Change Given 0.1969 0.11672 1.0462 1.024 0.48624 0.45864 1.7733 0.047381 2.7693 0.52568 0.14883 0.004291 2.0639 0 0.12755 1.1998 0.031811 0.46538 0.033413 -0.022074 0.040627 0.2206 0.02736 0.010336 0.10919 0.57326 0.0041078 -0.014862 0.0077626 0.84405 1.7283 -0.013709 -0.0013804 0.26244 1.8268 0.0086327 0.0023773 0.39905 0.59905 0.97312 0.68307 0.10652 0.41992 0.034668 0.10772 0.10305 0.79783 0.0089464 0.71555 0.56447 0.43409 0.028021 2.1828 0.34883 0.043485 0.16106 2.7264 0.041596 0.09499 0.083399 0.3354 0.93605 0.803 0.11306 0.23061 0.0060036 0.051459 1.4567 0.019534 0.18784 0.45853 0.25366 0.0030788 -0.24229 1.3487 0.25152 0.27834 -0.0071264 1.0917 1.1617 -0.0057955 0.6326 1.4127 0.14402 1.3449 0.18725 0.91236 0.034599 0.6937 0.34965 0.20382 2.9851 0.42688 -0.035338 -0.0081277 0.6665 0.37826 0.37393 0.68983 0.1387 0.6697 0.16829 0.50755 0.80071 0.56494 1.9144 0.48797 0.22085 0.026204 Amplification Peak 5 - CN values 5q35.1 chr5:169550001-181538259(probes 95244:96335) chr5:172650001-172790000(probes 95540:95545) chr5:171910002-173150000(probes 95490:95583) 0.083654 0.083654 Actual Copy Change Given 0.31012 -0.33913 -0.043474 -0.064267 0.24585 -0.12371 0.66802 0.045504 0.13571 -0.21316 -0.11472 0.0058991 -0.089013 -0.0085758 -0.1376 0.32538 -0.029778 0.47238 0 -0.0067561 0.047863 -0.037873 -0.0092232 0.3694 0.025053 0.85298 -0.024362 0.0015355 0.010341 0.0027351 -0.016419 -0.031426 0.0019889 0.0025277 -0.34671 0.013355 0 0.2987 -0.10793 0.010956 -0.085724 0.83795 0.12161 -0.012001 0.0055493 0.0077011 -0.0078027 0.01721 0.0041196 0.096815 0.4134 0.027406 -0.27799 0.3701 -0.15747 0.32091 -0.34926 0.073005 0.084114 0.033698 0.34678 0.30693 0.029801 -0.055334 -0.14183 0.0089335 -0.11941 1.0902 -0.013358 0.096009 0.014596 -0.25232 0.020144 -0.33735 -0.18914 -0.054784 0.23821 0.0092624 1.1237 0.091166 0.00064412 0.046558 0.0534 0.56505 -0.46157 0.60487 0.59604 0.062666 0.52703 0.16217 -0.1824 0.018609 -0.19402 0.28399 0.0078176 0.31531 1.3159 0.778 0.67802 -0.18299 0 0.29325 0.34709 0.42157 3.4769 -0.00043591 0.50132 1.1308 -0.01096 Amplification Peak 6 - CN values 6p21.1 chr6:41530002-42000000(probes 100218:100273) chr6:41650001-41660000(probes 100233:100234) chr6:41540001-42010000(probes 100219:100275) 0.061477 0.061477 Actual Copy Change Given 0.06178 -0.14298 0.0020559 0.031872 -0.0026117 -0.026741 0.0058425 0.0076374 0.32569 0.12331 -0.01489 0.27274 0.56791 -0.0058908 0.14209 -0.039052 0.0034612 -0.43835 0.0019717 0.31229 0 0.0974 -0.0057834 0.09101 0.025769 0.08524 -0.014911 0.0030595 0.015257 0.1564 0.22182 0.22778 0.0082915 0.010195 0.053987 0.0011978 -0.0052932 0.18129 -0.29725 0.10591 0.072176 0.42658 0.21462 0.38984 0.014877 0.076439 0.008393 0.096518 0.074004 -0.054474 0.35243 0.29234 0.016142 0.0088183 0.17694 0.67927 0.038209 0.0062571 3.6569 -0.10388 0.33649 0.84055 0.093264 0.18276 -0.050439 0.0095433 0.12969 0.031075 0.028497 0 0.29002 0.50344 -0.022336 0.35605 0.065751 0.031526 0.29214 -0.21219 0.19009 0.11064 -0.1366 0.71021 -0.033215 0.8871 0.009022 0.16307 0.0033657 0.20533 0.20356 0.31231 0.055094 0.031888 -0.032484 1.0639 -0.24039 0.30862 0.42079 -0.056472 2.0205 0.016343 0.15251 0.022586 0.25586 0.15636 0.25255 0.0017408 -0.002722 0.053243 0.38512 Amplification Peak 7 - CN values 6q27 chr6:170590001-170805979(probes 112386:112393) chr6:170590002-170805979(probes 112387:112393) chr6:170590002-170805979(probes 112387:112393) 0.21731 0.21731 Actual Copy Change Given 0.086443 -0.0083755 0.19624 -0.088935 -0.002221 -0.16163 0.2374 -0.0077654 -0.001941 0.10592 -0.01726 0.31071 0.11485 0.010898 0.30843 -0.060673 0.0049493 -0.13764 -0.010248 -0.00073381 -0.0055076 0 -0.015042 0.061181 0.031509 0.089207 0.164 -0.0079468 0 0.043326 0.0046378 -0.030411 0 0.012943 0.080132 0.018933 0.0086468 0.27711 0.046233 0.10679 0.056026 0.45178 -0.1622 -0.13364 -0.0076939 0.26805 -0.26163 -0.089236 -0.11126 0.14495 0.42028 0.17058 0.26101 0.33179 0.092724 0.016891 0 0.15594 -0.016682 0.041435 0.10872 0.17366 -0.033069 0.17855 -0.050413 0.0075668 0.13933 -0.22158 -0.0074486 -0.024341 -0.21789 0.30002 -0.46231 0 -0.18433 -0.34726 0.34004 -0.0078107 0.0042165 0.058859 -0.1913 -0.010757 -0.081523 -0.038079 0.33113 0.10564 0.20383 0.12457 0.12654 -0.095003 -0.04136 -0.00064887 -0.19631 0.48965 0.27213 0.30116 0.61196 0.29382 0.24693 -0.016945 0.13983 0.31983 0.28856 0.098902 1.0201 1.021 0.038852 0.23348 0.073349 Amplification Peak 8 - CN values 7p11.2 chr7:54680001-55520000(probes 117499:117594) chr7:54970001-55280000(probes 117532:117565) chr7:53070001-56050000(probes 117335:117654) 4.2652e-06 4.2652e-06 Actual Copy Change Given 3.6569 0.62123 0.17501 0.58246 3.6569 0.12823 0.36874 0.0039847 0.40728 0.084166 0.047197 0.016787 0.18888 0.024078 0.13096 0.054042 -0.02838 0.029941 0.048215 0.55719 -0.0028368 0.0066461 0.0066248 0.20718 -0.10368 0.068075 0.012484 -0.00020752 0.0054625 0.27077 0.95197 0.18757 0.20079 0.00051015 1.9495 0.0094101 -0.00063259 1.0574 0.17843 0.15015 0.059949 1.9006 0.123 -0.59028 0.032332 -0.0026641 0.86828 0.073084 0.78671 0.92876 0.40649 1.3105 -0.0047651 0.0060214 0.10874 3.6569 0.30821 0.062313 3.6569 0.87369 0.34401 0.41608 -0.12231 0.31002 -0.045723 0.0058565 -0.033499 0.075418 -0.011182 -0.17001 0.0056157 -0.014329 0.045744 0.024206 0.45324 -0.025471 0.37382 -0.23197 1.8817 0.46261 0.16286 0.036263 0.095048 0.33255 0 1.002 0.3307 0.084183 0.59256 0.58081 0.22459 0.39148 0.32195 1.5736 0.015445 3.04 0.10863 0.70046 0.51406 0.16231 0.12399 0.56294 0.59435 0.4801 2.4842 3.6569 0.0017013 0.2244 0.38776 Amplification Peak 9 - CN values 8q13.1 chr8:61600001-80710000(probes 131593:133669) chr8:65370001-65520000(probes 131997:132014) chr8:65190001-145138636(probes 131976:140459) 0.0045481 0.15746 Actual Copy Change Given 0.37917 -0.037509 -0.27312 0.3804 -0.0035641 0.078367 0.41904 0.044244 0 -0.064423 -0.11904 0.075777 -0.0080456 0.021683 0.08922 0.014344 0.014265 0 0.033119 3.6549 0.29627 -0.024744 0.021446 -0.36112 0.20283 0.002415 -0.0011738 -0.0071691 0.0149 0.04093 0.047985 0.10812 0.011985 -0.019558 1.1595 0.021078 0.0027939 -0.055008 0.013251 0.02283 0.037865 0.10476 0.1528 0.95462 0.14071 0.041135 -0.0047757 -0.014029 0.37536 0.11201 0.46563 -0.021487 0.29679 -0.0056906 0.21609 0.62473 1.3416 0.030505 0.35165 0.12404 -0.010248 2.0057 0.47553 0.12377 0.051899 0.017416 0.085944 0.44833 -0.0036885 2.9506 0.49725 -0.19284 -0.020669 0.60824 0.92717 1.8033 -0.10498 1.2158 0.35667 0.12376 0.073812 -0.096572 0.10546 0 0.0034856 0.54493 0.46567 0.081998 0.67177 0 0.51264 0.075725 0.17535 0.27888 0.023562 -0.13388 0.07264 0.11688 0.028079 0.13963 0.24336 0.25742 -0.072599 -0.13709 -0.34169 0.97509 -0.0023603 0.12923 -0.43493 Amplification Peak 10 - CN values 8q24.21 chr8:128150002-128209999(probes 138862:138869) chr8:128160001-128190000(probes 138863:138866) chr8:65190001-145138636(probes 131976:140459) 1.7592e-15 1.5908e-14 Actual Copy Change Given 3.6569 0.49564 0.38044 0.17452 0.45376 0.22209 0.41904 0.044244 0 -0.013626 0.54657 0.05564 0 0.021683 0.08922 0.014344 0.014265 0.014843 0.033119 0.33523 1.0713 0.0020517 0.021446 1.2397 0.20283 0.002415 -0.0011738 -0.0071691 0.0149 0.86498 0.047985 1.7272 0.011985 -0.019558 1.159 0.021078 0.0027939 -0.055008 0.013251 0.98605 0.054854 -0.047405 1.5065 0.68729 3.0428 0.16236 -0.0047757 -0.014029 0.37894 0.68267 0.46847 -0.021487 0.42813 -0.0039774 0.35337 0.84941 0.53902 0.030505 3.6569 0.11489 0.78991 0.78303 0.79285 0.014202 0.051899 0.017416 0.70638 0.44833 0 2.6484 0.4891 0.1414 1.4601 0.98536 0.96288 0.39307 0.15122 2.6756 0.35714 0.12376 0.073812 0.35623 3.6569 0 -0.45277 0.5687 0.48462 0.087669 0.67177 0 0.96214 0.099517 0.17535 0.27888 0.023562 2.1611 0.27068 0.6164 0.02548 0.90781 0.69971 0.25406 1.4147 -0.13709 2.2533 0.97509 -0.0023603 0.13454 0.39555 Amplification Peak 11 - CN values 8q24.3 chr8:144170002-145138636(probes 140452:140459) chr8:144180002-145138636(probes 140453:140459) chr8:65190001-145138636(probes 131976:140459) 1.7033e-09 0.0072783 Actual Copy Change Given 0.11548 -0.025363 0.39445 0.17452 -0.022529 0.22209 0.57203 0.044244 0 0.26147 0.48737 0.20231 0.35491 0.021683 0.20154 0.014344 0.014265 0.014843 0.033119 3.6569 1.0713 0.0020517 0.021446 0.69557 0.20283 0.002415 -0.0011738 -0.0071691 0.0149 0.77793 0.047985 0.25253 0.011985 -0.019558 1.5307 0.021078 0.0027939 -0.055008 0.013251 0.86581 0.074145 -0.053935 -0.034432 0.68729 0.91988 0.41823 -0.0047757 -0.014029 0.37894 0.93348 0.40417 0.14768 0.83086 0.245 0.35337 1.2057 0.98789 0.24698 0.3469 0.31331 0.78991 1.2151 0.54881 -0.088438 0.051899 0.017416 1.1031 0.44833 0 0.1632 0.4891 0.1414 0.41298 0.58122 0.96288 0.39307 0.15122 1.6389 0.35714 0.12376 0.073812 0.36204 0.2135 0 -0.029585 0.5687 0.75583 0.3246 0.46044 0 0.91304 0.099517 0.17535 0.37647 0.023562 -0.38562 0.48799 0.88189 0.02548 0.28532 0.21485 0.51142 0.9463 0.027699 1.891 1.3413 -0.0023603 0.13454 0.39555 Amplification Peak 12 - CN values 11q13.3 chr11:68860002-70000000(probes 169010:169133) chr11:69330001-69400000(probes 169063:169070) chr11:68700001-70980000(probes 168988:169247) 0.00014603 0.00014603 Actual Copy Change Given 0.067133 0.18455 -0.01995 0.18974 0.23973 -0.095616 1.054 0.0001629 0.03011 0.055175 0.048323 -0.011738 0.42278 -0.033309 0.062881 -0.11311 0.0085258 0.46961 -0.021092 0.31206 -2.3629e-05 0.2078 0.0025896 -0.074927 -0.11793 -0.016667 0.0067138 -0.0031371 -0.011722 0.13082 0.27454 0.4176 -0.19505 0.004386 0.23676 0.00028204 -0.00014997 0.20451 0 0.41549 0.69011 -0.10014 0.1244 3.6569 0.0044762 0.032543 0.004429 -0.036812 0.032933 0.46236 0.43567 0.49754 0.28221 0.048122 -0.076374 -0.16155 -0.30977 0.060617 0.49467 0.17725 -0.064426 0.23357 0.11711 -0.050835 0.046161 -0.0045473 0.71377 0.0061879 0.37023 0.18705 0.032133 -0.052349 -0.028872 0.042472 0.029305 1.7049 -0.069919 0.23286 0.35466 0 0.011589 -0.12175 0.059352 0.20578 0.010523 0.25511 0.27953 1.2258 0.2501 -0.011589 0.37768 -0.2448 0.13605 0.051769 0.0066128 3.6569 -0.0036363 0.44814 -0.006101 0.15639 1.9315 0.00072987 -0.14956 -0.063059 0.84216 0.006039 0.49022 0.2167 0.3555 Amplification Peak 13 - CN values 12p13.33 chr12:1-789999(probes 175490:175500) chr12:1-780000(probes 175490:175499) chr12:1-800000(probes 175490:175502) 0.13096 0.22803 Actual Copy Change Given 0.33063 0.087509 -0.026927 -0.07405 0.48594 0.058019 0.38451 0.011242 0.084632 0.338 0.18233 0.25508 0.70172 -0.00026927 0.17267 -0.089288 -0.011204 -0.41979 0.096288 0.3239 -0.042327 0.12421 -0.21652 -0.073677 0.10006 -0.034762 0.017029 -0.089817 0.010853 -0.12747 0.26905 0.043014 -0.13224 -0.0073215 -0.14286 -0.13288 -0.004785 -0.046907 0.1053 0.00064381 0.0063183 0.32789 0.0026953 0.01871 0.57346 0.23933 -0.0048804 0.22203 0.0079338 0.33915 0.72922 0.32772 0.032265 0.082465 0.28683 0.38347 0.61374 0.45881 0.24566 0.14657 0.58097 0.16615 0.044966 -0.048596 0.036247 -0.0005652 -0.10679 0.0050422 0.22233 0.070924 -0.11065 0.10087 0.0039906 0.34202 0.14676 0.27201 0.14428 0.46329 0.25657 0.011953 0.16585 0.08614 -0.1021 0.48055 -0.065824 0.18625 0.28506 0.20262 -0.045293 -0.12227 0.34868 -0.088497 0.33141 0.44506 0.5327 0.20377 0.36451 -0.063381 0.14337 -0.14855 0.28884 0.38045 0.026341 -0.23619 0.30589 -0.00092355 0.16673 -0.19831 0.51918 Amplification Peak 14 - CN values 12p11.21 chr12:32300002-32520000(probes 178529:178554) chr12:32310001-32320000(probes 178530:178531) chr12:30950001-32650000(probes 178402:178571) 0.021527 0.0341 Actual Copy Change Given 0.33127 0.12266 2.4101 -0.05872 -0.2419 0.28178 0.087634 -0.0015792 -0.26263 0.1824 -0.11409 -0.007352 -0.02048 -0.00026927 -0.1439 1.1759 -0.011204 -0.44354 2.9706 -0.0052684 0.010044 0.13198 -0.22164 -0.073677 0.090995 0.0057383 0.017029 -0.012898 0.0060361 0.0054788 0.30393 0.055171 0.41227 -0.0032984 -0.14286 0.0074647 -0.004785 0.055156 -0.29139 0.010287 -0.053883 -0.11388 0.63783 -0.0036183 -0.00090373 -0.23164 -0.016094 0.021885 0.0079338 0.15751 0.69949 -0.013149 0.032676 0.082465 0.15953 0.38347 -0.0002195 0.47659 -0.023475 0.15353 0.29227 -0.064387 -0.30827 -0.050843 0.035562 0.00064736 0.45907 0.0050422 0.17923 -0.45494 -0.15781 0.10087 0.0039906 3.6569 -0.19506 0.0015354 0.065765 0.46329 -0.0073471 0.12275 0.37611 -0.16669 -0.11578 1.3139 -0.036922 0.052539 0.077121 -0.064283 0.41183 0.11602 0.24205 0.19552 0.14 -0.025552 0.23123 0.18784 0.12422 -0.38704 0.019113 -0.17145 0.045848 0.38499 0.011342 -0.39014 -0.14571 -0.0021295 -0.0017725 -0.21621 0.58653 Amplification Peak 15 - CN values 12q15 chr12:69110002-69209999(probes 181917:181927) chr12:69120001-69200000(probes 181918:181926) chr12:62600001-72259999(probes 181193:182256) 8.8401e-09 8.8401e-09 Actual Copy Change Given 0.36683 -0.0839 0.00098242 0 1.7635 1.6414 1.4595 0.001013 0.017265 0.18911 -0.1158 0.00075843 -0.042138 0.0015809 -0.13797 0.021617 0.014578 -0.43853 0.065857 -0.010121 0.0092534 0.11916 -0.018666 -0.074705 0.79616 0.10029 0.012957 0.0029555 1.0557 -0.0011812 3.6569 0.049496 0.0049691 -0.00067653 -0.15285 0.003709 0.0010292 0.081098 -0.30036 0.0056551 -0.10769 -0.098722 0.055398 0.012713 -0.0020848 -0.0013247 -0.0044463 -0.014083 0.0049447 0.15535 0.76618 -0.052293 0.020454 0.084415 0.057106 3.6569 -0.011097 -0.28319 -0.038843 0.13386 -0.064056 -0.099656 -0.2969 -0.053221 -0.036697 0 0.82007 0.0075738 0.25611 0.21153 -0.20557 0 0.023232 0.010169 0.25553 0.014112 -0.084636 0.47945 0.44675 3.6569 0.53521 0.033422 3.6569 0.56931 -0.055679 0.12013 -0.09717 -0.055985 -0.03609 0.058951 0.29939 1.7775 0.014412 -0.011798 0.23014 -0.029256 0 0.015752 1.9552 -0.16449 0.11792 2.2936 0.2479 -0.38945 0.33513 -0.00082703 -0.065518 -0.21294 -0.22218 Amplification Peak 16 - CN values 13q31.1 chr13:86200002-86280000(probes 196319:196328) chr13:86210001-86260000(probes 196320:196325) chr13:86210001-86300000(probes 196320:196330) 0.045559 0.045559 Actual Copy Change Given 0.067541 0.015097 -0.048996 -0.25186 0.96643 -0.30373 0.060114 -0.024251 -0.016129 -0.0020778 0.026641 0.0053946 -0.01742 0.016018 -0.13987 -0.046274 0.018435 0.0066449 0.0032692 -0.012047 0.2577 -0.15452 -0.22532 0.50279 0.032644 -0.1158 -0.043723 -0.010196 -0.0025292 0.40285 0.63977 -0.03407 -0.0017129 0.12742 -0.10538 -0.0053355 -0.0083739 -0.2604 -0.3186 -0.16517 -0.24772 -0.14563 -0.043656 0.52974 0.16659 0.2272 -0.018405 -0.04161 -0.027336 0.71322 0.46634 0.38427 0.36695 -0.32754 -0.26642 0.86574 -0.050172 0.025161 -0.03483 -0.1677 0.27231 -0.31202 -0.0016562 0.070883 0.042691 -0.0093208 -0.45065 0.65947 0.29524 0.070156 -0.45783 0.028952 0 -0.10465 -0.23804 0.421 -0.20709 -0.026409 0.58088 -0.21249 -0.063448 -0.16921 -0.009023 -0.060604 0.42148 -0.18149 0.10666 0.058269 0.1105 0.36814 -0.24612 -0.019651 -0.014152 0.22962 -0.28923 -0.35043 -0.036342 -0.010369 0.16237 -0.025308 -0.11681 0.66485 -0.40834 0.11938 0.78408 -0.015217 0.62825 -0.15385 0.39977 Amplification Peak 17 - CN values 14q13.3 chr14:36190002-36479999(probes 202573:202613) chr14:36200001-36280000(probes 202574:202583) chr14:27200001-41050000(probes 201521:203111) 4.8825e-20 4.8825e-20 Actual Copy Change Given 1.1747 1.218 0.20897 0.10287 0.49294 0.60692 1.1209 -0.0033282 0.28202 3.6569 0.31664 -0.00054123 -0.024933 -0.0051167 0.016734 0 0.059196 0.0047995 0.023031 0.39401 0.011501 -0.13162 -0.21695 0.032096 0.034181 -0.013968 -0.0088939 0 -0.0029134 0.37015 -0.033461 -0.067116 0.0049086 0.0093717 1.1113 -0.0072284 -0.32892 0.083762 0.12923 0.14838 0.70876 0.77663 0.38905 0.55826 0.010756 -0.029788 -0.00035716 -0.037509 0.0070094 0.38508 -0.029184 0.60145 0.066344 -0.0063786 0.061758 0.57996 0.37398 0 1.1577 0.67324 0.34071 0.62931 1.1285 1.7374 0.25484 -0.0030037 2.8302 -0.019455 3.2372 3.3405 1.1326 0.30968 0.025524 1.0094 2.5456 2.8308 0.41225 -0.0089887 0.093404 0.067709 -0.0054751 0.37203 0.069425 2.5364 0.46422 2.5198 1.3922 0.019684 0.64131 0.77545 -0.18255 3.6569 0.94593 3.6569 3.6569 0.72179 -0.0093174 0.35589 0.46896 0.35636 0.15997 0.077805 0.27082 0.19521 0.50171 0.0069231 0.48433 0.46826 0.28366 Amplification Peak 18 - CN values 14q32.33 chr14:105520002-107043718(probes 209556:209574) chr14:105530001-107043718(probes 209557:209574) chr14:105530001-107043718(probes 209557:209574) 0.047232 0.10927 Actual Copy Change Given 1.1694 0.098397 0.40608 -0.018263 -0.28368 0.0020999 1.083 -0.075115 -0.18216 0.077006 0.1013 0.083612 0.3648 0.099454 0.06246 0 0.059196 0.023958 0.023031 0.59504 0.018771 -0.10703 -0.31342 -0.0020697 0.034181 -0.013968 0.0045582 -0.042209 0.07725 0.020973 -0.033461 -0.045815 0.0049086 -0.0048395 0.12998 0.0004688 -0.04101 0.33269 0.12923 -0.11945 0.65106 1.0657 -0.16014 1.2177 0.010756 0.27425 -0.017021 -0.037509 0.02505 0.32269 0.051251 0.51027 0.18424 0.11462 -0.10444 0.30996 -0.35549 0 0.10379 1.0833 0.42453 -0.048741 -0.18936 0.040652 0.1916 -0.0030037 0.15943 0.29807 0.14851 3.0737 -0.22038 -0.17557 -0.065143 -0.38086 -0.013654 0.61327 0.44553 0.16716 -0.081107 0.067709 -0.0072981 0.012626 0.016853 0.35792 0.41878 0.34333 0.47792 0.32511 -0.10866 0.10612 0.42165 0.14943 -0.3225 2.0249 0.25941 -0.059732 0.33307 0.065542 0.30422 0.16028 -0.13749 0.085074 -0.47814 0.19521 0.35358 0.021913 0.48433 -0.01575 0.37899 Amplification Peak 19 - CN values 17q23.1 chr17:42270001-83257441(probes 228852:232657) chr17:59850001-59880000(probes 230450:230453) chr17:59560001-61780000(probes 230413:230649) 0.016569 0.016569 Actual Copy Change Given -0.019008 0.098729 0.28799 0.37783 0.49784 0.54955 0.53289 0.0070634 0.33093 0.41579 0.052316 -0.0015804 0.46094 0.010373 0.45034 0.026237 -0.033463 -0.42696 0.13073 0.09733 0.011092 0.00068476 0.0086931 0.29524 0.023257 -0.0094111 0.07336 0.018901 1.0233 0.38766 0.06046 0.15451 0.015203 0.26669 0.31331 0.0053709 -0.00055008 0.35293 0.17723 0.55659 0.00035009 -0.053944 -0.025166 0.074337 0.0090998 0.26514 0.43722 0.021053 0.033008 -0.036352 0.46413 0.28252 0.31876 0.025688 0.070709 -0.15966 -0.33785 -0.022485 0.031149 -0.091313 -0.002229 0.089517 -0.086712 0.4763 0.049921 0.33842 0.015555 0.029502 -0.057268 0.26207 0.5448 0.13371 0.40361 0.03752 0.34772 0.016153 0.29634 0.068005 0.23316 0.018581 1.194 0.18499 0.31764 0.51365 0.024675 0.14015 0.36321 0.40752 0.0048719 0.20048 0.37253 0.32937 0.00024124 0.57044 0.0092321 0.29624 0.37728 0.39618 -0.012175 0.35228 0.088025 0.42295 0.5106 0.24121 0.13065 -0.0059846 -0.0030078 2.3779 0.3861 Amplification Peak 20 - CN values 19q12 chr19:29620001-29880000(probes 241974:242010) chr19:29760001-29770000(probes 241992:241993) chr19:29030001-29949999(probes 241900:242018) 0.0043776 0.0043776 Actual Copy Change Given -0.043828 -0.12316 -0.023596 -0.28399 -0.014319 0.5967 -0.023543 -0.0074883 1.0144 0.5165 -0.11848 -0.26899 0.23587 -0.030262 0.11931 -0.03729 -0.11678 -0.41394 -0.7823 -0.00055567 0.018245 3.6569 0.23942 -0.3506 -0.37169 -0.040545 0.014654 -0.00048156 -0.53083 0.20684 0.19009 0.18522 -0.10146 -0.0074347 -0.08908 0.0012976 -0.014685 0.013795 -0.082616 0.11841 -0.076388 3.6569 0.4267 0.031957 0.017002 0.0060483 -0.0037785 0.31711 0.16388 0.22769 -0.11952 0 -0.065024 0.018612 -0.16265 -0.21091 1.0939 0.042304 -0.067119 0.12895 -0.030591 -0.19416 -0.1327 -0.080843 -0.13936 -0.0058158 -0.20439 0.26396 -0.0081589 -0.28811 0.26143 -0.11497 -0.13669 0.2836 -0.2255 -0.3228 1.9726 0.1765 -0.10225 0.063919 0.58593 0.11171 0.043419 0.1012 1.1341 -0.22848 0.16311 -0.061225 -0.17469 0.052268 0.2995 -0.22452 -0.024916 -0.079826 -0.2608 0.55389 -0.0086474 0.020843 0.020782 0.03737 -0.13411 0.0094369 -0.15225 0.3044 -0.36726 0.06374 -0.0025335 0.0028226 0.30996 Amplification Peak 21 - CN values 20p11.21 chr20:22110001-23599999(probes 246859:247011) chr20:22510001-22520000(probes 246905:246906) chr20:22130001-23040000(probes 246862:246963) 0.14019 0.14019 Actual Copy Change Given -0.025853 0.091632 -0.25772 -0.12237 -0.24891 -0.12548 -0.36377 0.066607 0.033986 0.5326 -0.026884 0.00023012 0.19864 0.017689 -0.02868 -0.078361 0.011312 -0.13715 0.01744 0.32301 0.0063014 -0.077059 0.0071919 -0.090661 -0.071898 0.0079803 -0.038398 -0.0090295 0.0076101 -0.10268 -0.43418 0.20546 0.0040738 0.18777 0.13607 -0.0064597 0.0011642 -0.086543 -0.0095877 -0.41172 0.065756 -0.070029 -0.2327 0.091376 -0.00499 -0.044705 0.00094439 -0.089051 -0.0019362 0.2033 0.37178 -0.0464 0.20756 -0.35953 0.10603 0.45976 0.98913 0.055199 0.95898 -0.021354 -0.00022198 0.062734 -0.29137 0.21834 0.045391 0.0002569 0.76245 0.013543 0.31933 0.074183 0.028215 0.071554 0.055199 -0.15855 0.0069589 0.0067575 0.11602 2.4101 0.06966 0.076122 0.13398 0.065572 -0.15446 0.46062 0.66802 -0.44527 0.11827 -0.21083 -0.32714 -0.15021 2.0835 0.023114 0.030042 0.65447 3.6569 -0.37128 -0.013007 -0.39664 -0.019677 -0.0066972 -0.16873 0.04027 0.50115 -0.29058 0.27114 0.0038037 -0.0086313 -0.21173 -0.21482 Amplification Peak 22 - CN values 20q13.2 chr20:53300002-54059999(probes 249688:249774) chr20:53600001-53810000(probes 249722:249743) chr20:52760001-55430000(probes 249623:249941) 0.00041287 0.020081 Actual Copy Change Given 0.44253 0.17056 0.60199 -0.077343 0.23587 -0.076294 0.36097 0.038636 0.041666 0.66234 0.020103 -0.0034238 0.23445 -0.0054603 0.11563 0.020378 -0.006004 -0.11964 -0.79232 0.31719 0.014704 0.092712 0.0045906 -0.072106 -0.35183 0.084704 0.013788 0.004841 0.0070336 0.034246 0.24469 0.20585 0.42412 0.79797 1.5254 -0.0036274 -0.0034455 0.67944 0.0039519 -0.1254 0.031732 0.80471 -0.12727 -0.18038 0.50845 -0.032847 0.009813 0.074378 0.66993 0.00089355 1.3513 0.2813 0.75613 -0.35004 0.20793 0.49343 -0.33715 0.052717 0.81366 -0.014567 0.9659 0.050576 -0.27724 0.33172 0.044146 0.01042 0.39586 0.0053247 0.25204 0.19861 0.071766 0.10102 0.039126 -0.15717 0.45148 0.020956 0.24661 1.7173 0.16837 0.092156 0.18319 0.078869 0.093996 0.4599 0.23043 0.5612 0.026884 0.2452 0.15059 0.0064852 0.26783 0.029483 0.35515 1.068 3.6569 0.31064 0.79094 0.09114 -0.022513 0.017642 0.014785 2.4585 0.34779 0.030592 0.13206 0.009784 -0.0020278 0.078509 1.1745 Amplification Peak 23 - CN values 20q13.33 chr20:62820002-64444167(probes 250804:250906) chr20:63470001-63480000(probes 250877:250878) chr20:56660001-64444167(probes 250090:250906) 3.3603e-05 0.0072783 Actual Copy Change Given 0.74721 0.17056 0.1422 -0.077343 0.23587 -0.076294 0.36097 0.038636 0.041666 0.49184 0.020103 -0.0034238 0.23445 -0.0054603 0.11563 0.020378 -0.006004 -0.11964 0.74677 0.31719 0.014704 0.092712 0.0045906 -0.072106 1.5672 0.084704 0.013788 0.004841 0.0070336 0.034246 0.24469 0.2179 0.017596 0.26175 0.63028 -0.0036274 -0.0034455 0.26972 0.20484 -0.1254 0.031732 0.75239 -0.12727 -0.18038 3.6569 -0.032847 0.026652 0.074378 -0.19021 0.00089355 1.2708 0.58975 0.43744 -0.35004 0.20793 0.49343 0.37507 0.37616 0.81366 -0.014567 0.9659 0.050576 -0.13587 0.33172 0.044146 0.01042 0.39586 0.0053247 0.25204 0.83319 -0.45107 0.10102 0.039126 -0.15717 0.45148 0.020956 0.24661 1.9829 0.16837 0.092156 0.18319 0.078869 0.093996 0.4599 0.6699 0.096836 0.026884 0.2452 0.15059 0.0064852 0.76131 0.029483 0.35515 0.78307 2.6453 0.63822 0.89203 0.0090192 -0.022513 0.017642 -0.095619 1.081 0.027484 0.030592 0.36307 0.009784 -0.0020278 -0.091795 1.1745 Amplification Peak 24 - CN values 21p12 chr21:6780001-6950000(probes 251657:251683) chr21:6810001-6940000(probes 251662:251682) chr21:6740001-6969999(probes 251652:251685) 0.049034 0.049034 Actual Copy Change Given -0.26684 -0.22111 -0.23725 -0.81097 0.69344 -0.39975 0.37938 0.017733 -0.043867 -0.47418 -0.045441 0.030911 -0.13283 -0.038274 0.075831 -0.11233 -0.074692 -0.057466 0.034483 3.6569 0.00015477 0.13897 -0.044971 -0.00082298 0.0028755 -0.15181 -0.019731 -0.24211 0.044699 0.27367 -0.019204 -0.39456 -0.098107 -0.016987 0.078285 0.0044399 -0.12536 -0.18241 -0.11734 0.16907 -0.11584 0.25766 -0.082169 0.23796 0.041289 -0.0081438 -0.058788 0.014983 0.14615 0.17732 -0.25604 -0.48298 -0.014019 -0.006297 -0.074499 0.44457 -0.4125 -0.091106 -0.29524 0.00084242 0.24327 -0.024187 -0.04654 0.24059 -0.070526 -0.027548 -0.62232 -0.049748 -0.0027073 -1.0669 -0.17118 -0.23681 -0.45351 0.42685 -0.40808 -0.29438 0.23867 -0.24633 0.18193 0.093914 0.51906 0.045982 0.0058554 -0.051509 0.90333 0.18683 -0.34157 0.027457 0.12042 -0.093575 0.04533 0.010904 -0.27133 -0.037009 -0.015657 -0.2245 -0.039078 -0.03161 0.43324 -0.13185 -0.0085628 0.26283 -0.099188 1.1091 0.093652 0.066452 0.037987 -0.23268 1.1213 Amplification Peak 25 - CN values Xp22.33 chrX:1-150000(probes 259624:259646) chrX:1-50000(probes 259624:259631) chrX:1-170000(probes 259624:259648) 0.09985 0.09985 Actual Copy Change Given 0.3556 0.3337 0.040426 0.041768 0.30294 0.0063702 -1.0334 -0.047366 -0.32311 0.37599 0.16161 2.0276 0.1303 0.5478 -0.069065 -0.69956 0.02088 0.46047 -0.0013701 0.29275 0.0061087 0.056635 0.057631 0.5151 -0.048835 0.07429 -0.11389 0.0081057 -0.022259 -0.53234 0.29474 0.08924 -0.29349 0.0098621 -0.55724 -0.22214 0.081136 0.18085 -0.68857 -0.8535 -0.60666 -0.41257 0.070961 -0.31898 -0.11434 0.10327 -0.2003 0.070219 -0.19572 0.71172 -0.88544 -0.2677 0.27692 0.061405 -0.12553 0.090915 2.7501 0.11244 -0.13907 0.57211 0.46538 -0.58375 -0.24398 -0.1113 -0.25958 -0.027928 0.29911 -0.031254 -0.073069 0.026181 -0.15 0.2396 -0.72046 -0.2685 -0.42965 0.28021 0.23476 -0.45185 0.26903 0.22993 -0.34713 0.23272 -0.1411 -0.24974 -0.71669 0.29767 0.5909 0.26894 0.09147 0.19439 0.3888 0.013663 0.18667 0.032732 0.72864 0.014598 0.30006 0.12231 0.4347 -0.065814 -0.046274 0.19877 0.10514 0.26784 0.69624 0.45873 0.47661 0.40271 0.5074 Amplification Peak 26 - CN values Xq27.3 chrX:145300001-155960000(probes 271401:272221) chrX:145990001-146020000(probes 271476:271479) chrX:144170001-156040895(probes 271300:272237) 0.00090283 0.00090283 Actual Copy Change Given -0.19412 0.72003 0.21629 0.16666 0.10705 0.1382 -0.36275 0.039197 0.033305 0.4402 0.033765 -0.006945 0.14424 -0.013085 0.33215 -0.31076 0.011768 0.42728 0.044507 -0.00098388 2.9504 0.032437 0.43392 0.36614 -0.057202 0.345 0.0050536 -0.0075786 -0.022653 -0.026745 0.17097 0.078099 -0.23861 0.0062682 -0.32774 0.013155 0.0019623 0.69348 0.15639 0.0062778 0 2.565 0.66811 0.27462 -0.053913 -0.012805 0.73134 0.0024393 1.3377 0.47134 0.34288 0.14391 -0.0033937 -0.38253 0.4508 0.39533 0.26033 -0.028297 0.62754 0.14065 0.63407 1.8143 -0.33203 0.15127 0.02437 -0.030403 0.38364 -0.038285 0.23434 0.88325 0.23609 -0.061272 0.02046 0.4166 -0.23434 0.25837 0.57671 0.42164 0.70417 -0.21182 0.00909 0.09317 0.12204 -0.11136 -0.0060928 0.64042 0.52664 0.068226 0.31677 0.083404 0.51338 0.2882 0.095705 0.29071 0.45243 0.26047 0.034615 0.82331 0.36563 0.12246 -0.045401 -0.04527 0.044191 1.1146 0.88397 1.9462 0.47211 0.14703 0.37422 Amplification Peak 27 - CN values Yq11.223 chrY:20120002-20180000(probes 274464:274472) chrY:20130001-20170000(probes 274465:274471) chrY:20060001-20319999(probes 274455:274488) 0.026925 0.026925 Actual Copy Change Given 0.8167 0.074886 -0.68955 -0.63444 0.025577 -0.41226 -1.1098 -0.11627 -0.80937 -0.26163 -0.31627 2.1028 -0.57824 0.54201 -0.029991 0.94304 0.28324 -0.33859 -0.12904 2.126 0.42582 0.0065252 -0.60494 0.0011135 0.29811 -0.58021 -0.26057 -0.14006 -0.62789 -0.58821 0.54432 0.29547 -0.091415 -0.061513 -0.51384 -0.46536 -0.27417 -0.82396 -0.81834 -0.89877 -0.78721 -0.90908 -0.045264 0.066659 -0.31814 -0.36576 -0.032367 -0.18298 -0.79043 -0.46734 -1.2929 -0.86041 -0.62153 -0.72334 -0.61181 -0.14038 3.6569 0.056669 -0.10368 0.12299 -0.7239 -1.2149 -0.94913 -0.3663 -0.32211 -0.12047 -1.0159 -0.86885 -0.62761 0.36579 -0.58221 -0.3753 -0.83168 -0.48141 -0.70549 0.73664 -0.4909 -0.972 -0.0040985 1.8881 -0.75916 -0.17901 -0.05195 -0.61403 -0.91409 0.041256 -1.0087 0.045333 0.17351 0.33179 1.3244 -0.19117 -0.60695 -0.34117 0.0036615 0.20507 0.016823 -0.13768 -0.10979 -0.44484 -0.39497 0.10192 2.1667 0.26455 -0.24388 -0.97429 0.26488 0.17493 0.35921 Deletion Peak 1 - CN values 1p13.3 chr1:75610001-119940000(probes 7161:11554) chr1:108840002-109250000(probes 10439:10473) chr1:77440001-149930000(probes 7343:11567) 0.00012528 0.00012528 Actual Copy Change Given -0.034605 -0.068203 -0.25803 0.0066959 -0.24825 0.033065 -0.36064 -0.010392 0.036562 -0.20532 0.047566 0 -0.16165 -0.0085273 -0.14635 -0.054365 -0.1096 -0.44552 -0.7865 -0.34982 0.003734 0.1498 0.0022953 -0.35948 0.72951 0.11694 -0.013285 0.0014379 0.0093645 0.11052 0 -0.18429 0.0060439 -0.015516 0.68402 5.2693e-05 0.00098702 -0.13492 -0.065375 0.12335 0.040007 0.25493 0.10619 -0.60523 0.0015014 0.0034441 -0.012641 -0.014559 -0.0014742 -0.41827 0.46664 -0.0019716 0.17113 9.9991e-05 -0.15582 0.1855 -0.0030483 -0.28688 -0.014551 0.015744 -0.05345 -0.023913 0.088354 -0.054603 0.048192 -0.001295 -0.54665 -0.35366 -0.26858 -0.17801 -0.22055 -0.0060177 -0.40134 -0.26666 -0.0059344 -0.33813 0.045113 -0.24124 0.14671 -0.20855 -0.16865 -0.036448 -0.032979 -0.081325 0.0124 0.27524 -0.35016 -0.069371 0.07081 0.10542 -0.19189 -0.28209 -0.15988 -0.036542 0.26196 0.050352 -0.23632 -0.027334 -0.0063529 -0.1799 -0.037569 -0.43742 -0.23476 0.092253 -0.28029 -0.0048696 -0.0020922 0.0016583 -0.44173 Deletion Peak 2 - CN values 3p24.1 chr3:1-89510000(probes 43265:51457) chr3:28570001-28799999(probes 45532:45553) chr3:1-61060000(probes 43265:48614) 0.01149 0.011638 Actual Copy Change Given -0.22325 -0.18886 -0.2497 0.0042102 -0.24106 -0.17608 -0.36536 -0.01723 -0.036626 -0.20324 -0.11973 0.00046263 0.0097819 0.033371 -0.14088 -0.056846 -0.13669 -0.43532 0.011024 -0.35271 -0.0039503 -0.14706 -0.049319 -0.30143 -0.13298 -0.0063413 0.0052443 -0.0058434 -0.0078023 -0.010995 -0.28189 -0.23795 0.0026183 -0.048164 -0.2597 -0.00044215 -0.00065342 -0.027292 -0.29493 0.055197 -0.72892 -0.26917 -0.15125 -0.59311 -0.0045078 -0.00023614 0.0010978 0.0060967 0.0059731 -0.25468 -0.52976 -0.071889 -0.12783 0 -0.1139 -0.33585 -0.36209 -0.29074 -0.30166 0.14536 0.21416 -0.17983 -0.27163 -0.28961 -0.05425 0.0086807 -0.27911 -0.050867 -0.060388 0.13488 0 0.036369 -0.0032455 -0.34061 0.022818 -0.31358 -0.10968 -0.22806 -0.22648 0.15403 0.0099741 -0.084045 -0.060929 0.28022 -0.43778 -0.20933 -0.03859 -0.0034971 -0.22208 -0.077586 0.046311 -0.27724 -0.19133 -0.34791 -0.27797 -0.068491 -0.21868 0.018637 -0.016515 -0.0089432 -0.082298 -0.18342 -0.050576 -0.36266 -0.42686 0.0053143 -0.0022198 -0.20879 -0.37954 Deletion Peak 3 - CN values 4q35.2 chr4:187670001-190179999(probes 79360:79388) chr4:187840002-190110000(probes 79378:79379) chr4:187850002-190119999(probes 79379:79380) 0.00030284 0.00030284 Actual Copy Change Given -0.28675 -0.043793 -0.39705 -0.47117 0.0024358 -0.0098233 -0.3382 0.13217 -0.0014464 -0.11741 0.022109 0.20971 0.069115 0.014763 0.15677 -0.21505 -0.21418 0.00060747 -0.49865 0.083207 -0.018584 -0.16293 0 0.12669 -0.1981 -0.18813 0.19311 -0.0096618 -0.0016838 -0.12302 -0.13309 0 -0.0038317 -0.036545 0.41056 -0.00072471 0.0017494 -0.040896 -0.16159 -0.15564 0.0093757 -0.081248 0.06578 -0.27667 -0.011638 0.27781 -0.012948 0.009914 0.01096 -0.2338 -0.54913 0.047875 0.2199 0.2591 0.064847 0.18264 -0.13895 0.054862 0.0053983 0.18469 -0.00098257 -0.25746 -0.13569 -0.26708 -0.1448 -0.0036231 -0.41274 -0.012516 -0.19439 0.24588 0.0078139 -0.11828 -0.29433 -0.0026139 -0.0038071 -0.33436 -0.22636 -0.0040304 0.068623 0.1272 -0.018933 -0.11597 -0.042734 -0.40341 -0.11419 -0.15094 -0.091595 -0.065917 0 -0.070326 -0.2059 -0.0012473 -0.046276 0.17897 0 -0.040335 0.77425 -0.0037785 0.35686 0.13428 0.10433 0.39095 0 0.27675 -0.32358 -0.22247 0.48471 0.21585 -0.14981 Deletion Peak 4 - CN values 5q15 chr5:44800001-152420000(probes 83527:93454) chr5:97490001-97689999(probes 88159:88177) chr5:83830001-118040000(probes 86712:89968) 0.018625 0.018186 Actual Copy Change Given -0.29607 -0.33913 -0.03645 -0.034114 0.24585 -0.14144 -0.36405 0.032199 0.13571 -0.36759 -0.11566 0.0058991 -0.063577 -0.0085758 -0.1376 0.32538 -0.029778 0.45 0 -0.0067561 0.047863 -0.033191 -0.0092232 0 0.025053 -0.12362 -0.024362 0.0015355 0.010341 0.0027351 -0.016419 -0.031426 0.0019889 0.0025277 -0.34671 0.013355 0 0.2987 -0.11738 -0.24063 -0.7942 -0.31391 -0.37241 -0.012001 0.0055493 0.012468 -0.0078027 0.01721 -0.023893 0.10396 -0.51809 0.027406 -0.27799 0.36549 -0.15747 -0.0056316 -0.36028 0.073005 -0.2295 -0.12861 0.34875 -0.49167 0.029801 -0.055334 -0.14043 0.0089335 -0.11941 -0.34191 -0.0036409 0.096009 -0.22762 -0.12513 0.038801 -0.32992 -0.19878 -0.054784 0.13897 0.0092624 -0.21051 0.091166 -0.0016489 -0.14747 0.0534 -0.10392 -0.44795 0.15839 0.64939 0.062666 0.52703 0.14448 -0.18187 -0.29141 -0.19095 -0.33513 0.0078176 -0.13853 -0.0172 0.376 0.67802 -0.18299 0 -0.20052 -0.12156 0.42157 0.53088 -0.00043591 0.4866 -0.22204 -0.80652 Deletion Peak 5 - CN values 6p11.2 chr6:1-170805979(probes 96336:112393) chr6:57300001-61500000(probes 101894:101898) chr6:57340001-61509999(probes 101898:101899) 0.07778 0.24293 Actual Copy Change Given 0.10158 -0.14298 -0.0046276 0.057511 -0.0026117 -0.026741 0.0058425 0.0076374 0.014042 0.12331 -0.01489 -0.00032481 1.0025 -0.0058908 0.14209 -0.039052 0.0034612 -0.43835 0.0019717 -0.0091165 0 0.0974 -0.0057834 -0.090126 0.025769 0.08524 -0.014911 0.0030595 0.015257 0.1564 0.22182 0.16895 0.0082915 0.010195 0.013815 0.0011978 -0.0052932 0.18129 -0.30497 0.12171 -0.69747 0.42658 0.69125 -0.21896 0.014877 0.08541 0.008393 0.096518 -0.026252 -0.054474 0.35243 0.29234 0.18124 0.0088183 0.17694 0.17976 0.0010521 0.0062571 0.38035 -0.10388 0.33649 0.84055 0.093264 0.18276 -0.050439 0.0095433 0.12969 0.031075 0.014245 -0.012716 0.029327 0.0013725 -0.020253 0.46721 0.065751 -0.0059872 0.29214 -0.21219 0.19009 0.11064 0.19025 0.045281 -0.033215 0.11728 0.021219 0.16307 0.0033657 0.20533 0.21141 0.048885 0.055094 0.031888 -0.032484 -0.0062391 -0.24039 0.30862 0.010105 -0.056472 -0.32673 -0.019038 -0.15752 0.016652 0.1839 -0.0020912 -0.19025 0.0017408 -0.002722 0.053243 -0.41501 Deletion Peak 6 - CN values 6q16.3 chr6:74050002-170805979(probes 103160:112393) chr6:104920002-104959999(probes 106106:106109) chr6:64720001-170777486(probes 102232:112389) 5.4305e-06 1.0534e-05 Actual Copy Change Given -0.23565 -0.21877 -0.22783 -0.28111 -0.24844 -0.16163 -0.36778 -0.0077654 -0.001941 0.10592 -0.017338 -0.0025236 0.010232 0.010898 0 -0.076487 0.0049493 -0.44396 -0.010248 -0.34429 -0.0091921 0 -0.015985 -0.3518 -0.11894 0.089207 -0.024227 -0.0079468 0 -0.13597 0.0046378 -0.30993 0 0.0069545 -0.12217 -0.13193 -0.17038 -0.15835 -0.30404 -0.40076 -0.71241 0.20625 -0.35443 -0.49164 -0.0076939 -0.21408 -0.01266 -0.089236 -0.40653 -0.24345 -0.51737 -0.17745 -0.32991 -0.0012644 -0.15136 0.0010759 0 -0.28257 0 -0.27199 -0.29962 -0.39872 -0.31997 0.15485 -0.050413 0.0075668 0.0312 -0.25048 -0.27752 -0.022601 -0.45932 -0.15997 -0.40918 0 -0.4476 -0.33447 -0.085234 -0.24878 0.020053 -0.2099 -0.35984 -0.1621 -0.081523 0.1625 -0.0028362 -0.24357 -0.12085 0.18988 -0.18192 -0.095003 0 0.010326 -0.344 0.32154 -0.24798 -0.03495 -0.0014141 -0.053856 -0.32915 -0.19103 0.11701 -0.0010539 -0.25414 -0.10101 -0.77848 -0.0061011 -0.49243 -0.20502 -0.42944 Deletion Peak 7 - CN values 8p23.1 chr8:1-30999999(probes 126383:128757) chr8:6470002-6570000(probes 126684:126692) chr8:80002-38510000(probes 126393:129521) 3.4868e-07 3.4868e-07 Actual Copy Change Given -0.54915 -0.037648 0.16073 -0.26928 -0.25731 -0.17363 -0.33218 -0.044087 -0.27075 0.17954 -0.19612 -0.0056194 -0.053012 -0.020085 -0.069809 -0.00010534 -0.0033958 0.0093685 0.016287 0.30166 -0.0048689 -0.12044 -0.016076 -0.3545 -0.20273 -0.031569 -0.0024378 -0.013295 0.010703 -0.52829 -0.16965 -0.29567 0.0032861 -0.2928 -0.57098 -0.0097224 -0.0056111 -0.45382 -0.38461 -0.059202 0.036174 -0.0024591 -0.5935 -0.59272 -0.32931 0.029234 -0.053407 -0.095795 -0.36703 -0.042435 0.33234 -0.073938 -0.296 0.00124 -0.41843 -0.28517 -0.41379 0.0080778 -0.46892 -0.39362 0.39863 -0.65232 -0.32375 0.28554 -0.031612 0.012024 -0.21034 -0.36148 -0.29044 -0.56909 -0.25848 -0.21347 -0.04744 0.051857 -0.23219 -0.72399 -0.13127 0.48734 -0.55037 0.12185 -0.11354 -0.22921 -0.22473 -0.076466 -0.34156 -0.56024 -0.4101 0.081144 -0.52803 -0.21178 -0.31263 -0.555 -0.20345 -0.017416 -0.025707 -0.39767 0.21074 -0.4207 0.039886 0.14613 -0.22738 -0.34498 -0.44062 -0.38521 -0.80706 0.0099615 0.0014811 -0.010277 -0.84962 Deletion Peak 8 - CN values 9p23 chr9:7790001-10630000(probes 140958:141198) chr9:8290001-10630000(probes 141000:141198) chr9:40002-29740000(probes 140466:143048) 2.2751e-09 0.0091615 Actual Copy Change Given -0.037129 0.25146 -0.44099 0.11494 -0.25443 -0.30066 -0.37169 -0.012342 -0.081279 -0.19088 -0.12441 0.0012303 0.029356 -0.028412 -0.060447 -0.38086 -0.16817 -0.44029 -0.77965 -0.59331 -0.0060134 -0.14789 -0.0069232 -0.26876 -0.34599 -0.19445 -0.029125 -0.34172 -0.052344 -0.011632 -0.2953 -0.37781 -0.201 -0.043774 -0.085913 -0.020193 -0.0026073 -0.35712 0.16476 -0.032753 -0.71409 -0.022749 0.1389 -0.33366 -0.33566 -0.036522 -0.70308 -0.057956 0.14807 -0.067483 -0.53541 -0.61482 -0.32751 -0.0029936 0.1311 -0.40826 -0.36878 -0.2956 -0.34814 0.67351 0.45921 0.26065 -0.32718 0.71003 -0.1435 -0.0060512 -0.049539 -0.26243 -0.023609 -0.12728 -0.2222 -0.18741 0.13056 -0.60165 -0.233 1.4624 -0.085739 0.21738 -0.42749 -0.10054 -0.16849 -0.16366 -0.18148 -0.22958 -0.45472 -0.29448 -0.34442 -0.21818 -0.22537 -0.22078 0.21144 -0.30479 -0.20308 -0.34635 -0.28586 -0.83376 -0.35348 -0.0026561 -0.47115 0.29772 -0.027518 -0.86779 -0.19296 -0.38057 -0.31657 -0.036544 -0.00148 -0.60515 1.2414 Deletion Peak 9 - CN values 9p21.3 chr9:21860002-22450000(probes 142274:142348) chr9:21950002-22009999(probes 142288:142295) chr9:40002-29740000(probes 140466:143048) 6.2956e-25 1.3346e-21 Actual Copy Change Given -0.013869 0.10117 0.19211 -0.090452 -0.25443 -0.15404 -0.37169 -0.012342 -0.40834 -0.19795 -0.12441 0.0012303 -0.66243 -0.028412 -0.060447 -0.3952 -0.14101 -0.030459 -1.2929 -1.0451 -0.0060134 -0.14789 -0.0069232 -0.26876 -0.34599 -0.19445 -0.029125 -0.69294 -0.052344 -0.011632 -0.2953 -0.37781 -0.201 -0.043774 -0.085913 -0.16137 -0.6837 -0.82561 0.16476 -0.032753 -1.2929 0.70345 -0.1193 -0.30252 -0.33185 -0.036522 -0.017255 -0.014096 0.13277 -0.067483 -0.53541 -0.93522 -0.30193 -0.0054358 -0.64436 -0.40826 -0.36878 -0.2956 -0.26135 -0.93083 0.45921 0.26583 -0.021372 0.71003 -0.1435 -0.0060512 -0.049539 -0.52434 -0.034545 -0.46046 -0.2222 -0.18741 0.11713 -0.60165 -0.2152 0.89435 -0.069577 -0.014279 -0.74844 -0.10054 -0.16849 -0.15906 -0.18148 -0.22958 -0.45472 -0.39573 -0.34442 -0.21537 -0.22537 -0.22078 -0.19264 -0.47141 0.10255 -0.35144 -0.28586 -0.84414 -0.35348 -0.0026561 -1.064 -0.52346 -0.053893 -0.68973 -0.22862 -0.38057 -0.71817 -0.036544 -0.00148 0.21701 -1.2613 Deletion Peak 10 - CN values 10q25.1 chr10:50720002-133797422(probes 155216:163098) chr10:107850002-108129999(probes 160704:160709) chr10:106920001-110010000(probes 160607:160891) 0.046324 0.046324 Actual Copy Change Given -0.3179 -0.32103 -0.041819 -0.11556 -0.25165 0.019917 -0.3039 0.030086 -0.037048 -0.024115 0.0086236 -0.0081212 -0.047247 -0.00042359 -0.12312 -0.34889 0 -0.43431 -0.78761 -0.016879 -0.0027604 0.062976 0.0095702 0.12863 0.2656 -0.018669 -0.010815 -0.0059326 0.0074886 0.21323 0.23538 0.052005 -0.1948 0.0017545 -0.19118 -0.0051361 -0.0029615 -0.034164 -0.30148 -0.22272 -0.0029606 -0.35072 -0.020846 0 0.0020945 0.017329 0.0012653 -0.041287 -0.38484 -0.026966 0.95603 -0.083368 0.0075509 -0.00070968 -0.0078262 -0.21141 0.31995 -0.28928 -0.43715 -0.18691 -0.066046 -0.17224 -0.08913 -0.061658 -0.14318 -0.0067254 0.32524 -0.010299 0.11061 -0.14688 0.025554 -0.12305 -0.036499 0.36406 -0.21966 0.0073822 -0.059829 0.00022887 -0.011513 -0.17973 -0.0077434 -0.016192 -0.098774 -0.054463 -0.23384 -0.24747 -0.023827 -0.066494 -0.05298 -0.074377 -0.13579 -0.31685 0.12107 -0.98489 -0.27961 -0.030761 -0.034794 -0.0061875 0.20706 -0.17551 0.047838 -0.13149 -0.24539 -0.37275 -0.36266 -0.23991 0 -0.20416 -0.44407 Deletion Peak 11 - CN values 12p13.1 chr12:30001-133275309(probes 175495:188175) chr12:12810001-14000000(probes 176566:176660) chr12:8150001-20949999(probes 176186:177362) 0.017924 0.018186 Actual Copy Change Given -0.70164 -0.30955 -0.47477 -0.07405 -0.24936 0.28178 -0.27227 -0.0015792 -0.26263 0.1824 -0.11409 -0.007352 0.011728 -0.00026927 -0.1439 -0.3558 -0.011204 -0.44354 -0.80076 -0.0052684 -0.29864 0.12514 -0.21652 -0.073677 0.090995 0.0057383 0.017029 -0.32958 0.0060361 -0.12747 0.031717 0.055171 -0.39997 -0.27109 -0.14286 -0.12517 -0.004785 -0.32075 -0.29139 0.00064381 -0.020671 -0.11388 0.11627 -0.0036183 -0.00090373 -0.1743 -0.0010869 0.021885 0.0079338 0.17378 0.72922 -0.013149 -0.1101 0.082465 -0.071868 0.38347 0.047476 0.096082 -0.023475 0.15353 0.29227 -0.032317 -0.30827 -0.050843 0.035562 0.00064736 0.11686 0.0050422 -0.020332 -0.45494 0.00064478 0.10087 0.0039906 1.4866 -0.22926 -0.32052 -0.22218 0.46329 -0.0073471 -0.18766 -0.34925 -0.1669 -0.11578 0.49485 -0.036922 -0.12241 -0.10403 -0.064283 -0.053899 -0.12227 0.21261 -0.27331 0.14 -0.025552 0.23123 -0.39156 -0.33077 -0.39512 -0.016918 -0.17145 0.045848 -0.087652 0.011342 -0.39014 -0.44712 -0.0021295 -0.0017725 -0.21621 0.58653 Deletion Peak 12 - CN values 13q11 chr13:1-18870000(probes 188176:190088) chr13:18190001-18240000(probes 190042:190051) chr13:17420001-57519999(probes 189950:193556) 1.3463e-11 1.3463e-11 Actual Copy Change Given -0.46884 -0.4125 -0.25894 -0.28172 -0.60228 -0.025922 -0.41792 -0.011501 -0.01201 -0.31433 0.026641 0.0053946 -0.090855 0.016018 0.10244 -0.064694 0.018435 0.0066449 -0.78895 -0.056917 -0.063253 -0.39002 -0.38539 -0.35761 0.032644 -0.1158 -0.043723 -0.010196 -0.0025292 -0.25742 0.015098 -0.03407 -0.18313 0.44044 -0.63977 -0.0053355 -0.43777 -0.2604 -0.3094 -0.12541 -0.40829 -0.62038 -0.46283 -0.3289 -0.042559 -0.00062506 -0.38386 -0.04161 -0.18979 0.083686 0.048624 -0.14634 -0.30777 -0.18148 -0.24983 -0.58911 -0.35175 -0.11072 -0.67828 -0.1677 -0.42871 -0.35458 -0.0076952 0.50246 -0.042678 -0.0093208 -0.16605 -0.34984 -0.53674 -0.24476 -0.061215 -0.23125 0.0093095 -0.38947 -0.21629 -0.036051 -0.22065 -0.29241 -0.21057 -0.20862 0.1382 -0.17218 -0.009023 -0.4275 -0.007296 -0.31176 -0.22149 0.073743 -0.23372 -0.18364 -0.46318 -0.039745 -0.014152 -0.63931 -0.28923 -0.32805 -0.036342 0.01819 -0.29266 -0.29876 -0.16458 0.084879 -0.025418 -0.47181 -0.40094 -0.42833 0.00059797 -0.34264 0.34916 Deletion Peak 13 - CN values 15q13.1 chr15:1-57490000(probes 209575:214547) chr15:27840001-30850000(probes 212013:212022) chr15:26880001-32880000(probes 211916:212126) 0.066565 0.068141 Actual Copy Change Given -0.46046 -0.33983 -0.31743 -0.13641 -0.23557 -0.14222 -0.027522 0.00027489 -0.087829 -0.20363 -0.12722 -0.0031858 -0.18386 0.066536 -0.1132 -0.11943 0.0086772 -0.43251 -0.79494 -0.36218 -0.0042631 -0.086783 0.0021868 -0.075825 0.025557 -0.14772 -0.016919 0.00031233 0.0055821 -0.087634 -0.2694 -0.055127 -0.19059 -0.036864 -0.036394 0.0022878 0.00071061 -0.041055 -0.32404 -0.39934 0.061439 -0.2697 0.027333 -0.27761 0.010971 0.0019465 -0.04621 -0.035162 -0.17944 -0.41245 1.1692 -0.077676 -0.2938 -0.32491 -0.22757 -0.45858 -0.38984 -0.25267 -0.261 -0.37552 -0.22429 -0.60828 -0.30895 -0.30776 -0.076259 -0.0022153 -0.29591 -0.31838 -0.27226 -0.14529 -0.46117 0.16245 -0.061369 -0.072398 -0.21126 -0.33667 -0.36391 -0.24154 -0.31015 -0.20102 -0.0050773 -0.043263 -0.18909 -0.10676 -0.45846 -0.33751 -0.11732 -0.22747 -0.20802 -0.19151 -0.2434 -0.24586 -0.16826 -0.35717 -0.54025 -0.012325 -0.039381 -0.030941 0.5909 0.074219 -0.065631 -0.29498 -0.23373 -0.068508 -0.3989 -0.05471 -0.019127 -0.42951 -0.44666 Deletion Peak 14 - CN values 16q24.3 chr16:76640002-90338345(probes 224054:225085) chr16:89240001-90239527(probes 225068:225074) chr16:88210001-90259290(probes 225044:225076) 0.065971 0.068141 Actual Copy Change Given -0.028299 -0.54242 -0.29553 0.043259 0.26255 -0.037011 -0.34131 -0.0090365 -0.0054999 0.18504 0.042377 -0.00029778 -0.2372 -0.0051837 0.026253 -0.27846 -0.0052106 0.46882 0.027476 0.37396 0.25339 -0.081039 -0.042823 -0.18753 -0.29328 -0.16702 -0.019265 0.00048928 0.0083961 -0.27093 0.36644 -0.12672 0.0095205 -0.051231 -0.19332 -0.0018212 -0.0028441 0.37329 -0.30013 -0.3862 0.014553 -0.14691 0.091944 0.30559 -0.16796 -0.032459 -0.0033506 0.017438 -0.0090715 0.3189 0.86781 0.4022 -0.29497 0.018145 -0.12539 0.60694 -0.34438 0.061019 -0.19741 0.14235 0.2148 -0.50438 -0.29814 0.18613 0.06958 -0.0032786 -0.16364 -0.32695 0.011288 -0.40759 -0.46655 -0.066036 0.42107 -0.34313 -0.20204 0.012366 -0.080103 0 -0.10678 -0.15662 -0.15368 -0.15998 0.050642 -0.060795 -0.2414 0.20382 -0.27437 0.090446 0.26768 0.10175 -0.20038 -0.21034 -0.10784 -0.29428 0.27442 0.03024 0.027322 -0.39007 0.22117 -0.15969 0.028475 0.37448 -0.12088 -0.16601 0.091564 0.017149 0.49423 -0.14577 0.39754 Deletion Peak 15 - CN values 17p13.1 chr17:130001-64159999(probes 225105:230892) chr17:7380001-7700000(probes 225692:225721) chr17:110001-22799999(probes 225101:226901) 5.6095e-13 5.6095e-13 Actual Copy Change Given -0.49533 -0.27204 -0.26564 -0.30151 -0.25368 -0.10703 0.34291 -0.0043028 -0.25315 0.092482 -0.11892 -0.0067299 -0.21459 -0.030838 -0.16121 -0.29429 -0.14675 -0.42106 -0.80305 -0.059321 0.010979 -0.13487 -0.20965 -0.34025 -0.14363 -0.12251 -0.01418 0.0018936 0.015864 -0.27492 -0.15108 0.12431 0.018149 -0.26125 -0.11113 -0.016621 -0.0034681 -0.27627 -0.31067 -0.42824 -0.7852 -0.080069 -0.32007 -0.56521 -0.010889 -0.21748 -0.42678 -0.055101 -0.3679 -0.62775 0.4047 -0.48013 -0.13923 -0.34613 -0.20162 -0.15569 0.42095 -0.29795 -0.016468 -0.36303 -0.35914 -0.68181 -0.30425 -0.047692 0.047314 -0.33438 -0.16329 0.014726 -0.24195 -0.43316 -0.23317 -0.11973 -0.42676 -0.34408 -0.19839 -0.019517 -0.22153 0.014624 -0.35182 -0.1027 -0.15858 -0.15881 -0.18925 -0.086758 -0.45606 -0.31192 -0.53571 -0.060804 -0.060399 -0.15054 0.047149 -0.28759 -0.17026 -0.58618 0.014006 -0.1168 -0.33592 -0.39803 -0.0080416 -0.15827 0.025958 -0.026566 -0.19349 -0.39349 -0.60095 -0.0075816 -0.0088083 -0.18958 -0.46504 Deletion Peak 16 - CN values 18q21.31 chr18:24760002-80373285(probes 234369:239533) chr18:57340001-57380000(probes 237720:237723) chr18:44560001-80287934(probes 236413:239523) 0.02647 0.02729 Actual Copy Change Given 0.0018123 -0.36048 -0.41812 0.021164 -0.24875 -0.023002 -0.36784 -0.015707 -0.032021 -0.1523 0.050217 0.0066912 -0.041009 -0.0074771 -0.21176 -0.32285 0.012164 -0.43868 0.0067178 -0.34959 -0.0065165 -0.27578 0.0085944 -0.29455 -0.053691 -0.12929 -0.015692 -0.0077043 -0.0015411 -0.23945 -0.15111 -0.0036776 -0.20058 -0.27657 -0.55082 -0.015902 0.0012585 -0.12262 -0.23862 -0.32255 -0.62683 0.090589 -0.36968 0.30783 -0.33096 -0.22871 -0.056112 -0.092142 -0.39863 -0.41561 -0.53648 -0.44832 -0.16167 -0.36614 -0.27822 -0.60276 0.20965 -0.28389 -0.4805 -0.45451 -0.072433 -0.27867 -0.29234 -0.058109 0.03643 -0.010933 -0.12269 -0.01669 0.22572 -0.28692 -0.48033 -0.20379 -0.034043 0.2891 -0.17031 -0.27546 -0.10822 -0.054259 -0.52558 -0.21037 -0.17471 -0.16453 -0.026969 0.087902 -0.0039929 -0.35097 -0.32697 -0.078131 -0.42338 -0.079541 0.041422 -0.31892 -0.1396 0.29633 -0.28815 0.15677 -0.4375 -0.40085 -0.018729 -0.020673 -0.13654 -0.42671 -0.051592 0.0088112 -0.51146 -0.042972 -0.01734 -0.21349 -0.63757 Deletion Peak 17 - CN values 19q13.33 chr19:38620002-58617616(probes 242979:244791) chr19:50090001-50110000(probes 244113:244115) chr19:46640001-50150000(probes 243761:244121) 0.07778 0.07778 Actual Copy Change Given -0.050791 -0.12316 0.26287 -0.27375 -0.0183 -0.054286 0.35816 -0.0094054 -0.19868 0.5165 0.048881 -0.32222 0.19063 -0.030262 -0.082136 -0.03729 -0.14282 -0.41214 -0.79593 -0.00055567 0.018245 -0.2679 0.25087 -0.062886 -0.28679 -0.045078 0.014654 0.028068 -0.5278 -0.27595 -0.036105 0.18522 -0.10146 -0.0074347 -0.42084 0.0012976 -0.014685 -0.13003 -0.081501 -0.38624 -0.076388 -0.26288 -0.33173 0.65572 0.017002 0.0060483 0.02382 -0.092558 0.16388 0.26177 -0.04106 0 -0.16907 0.018612 -0.10292 -0.17721 -0.60349 -0.30712 0.26721 -0.34596 -0.030591 -0.24537 -0.1327 0.18519 -0.14057 0.002464 -0.15878 0.26343 0.013021 -0.41459 0.29562 0.0078882 0.25409 0.2836 -0.18823 0.041493 -0.20028 0.19987 -0.0981 0.063919 -0.14156 0.086309 -0.0019965 -0.094063 -0.44474 -0.22496 0.011767 -0.061225 -0.13649 -0.10011 0.17077 -0.2183 0.17375 0.0618 -0.2608 -0.39857 -0.44906 0.020843 0.016262 0.073232 -0.10983 -0.42605 0.082478 -0.36382 -0.00095086 -0.045999 -0.0025335 0.042877 -0.4764 Deletion Peak 18 - CN values 21p11.2 chr21:7820002-8989999(probes 251807:251977) chr21:8430001-8450000(probes 251895:251897) chr21:7870001-13990000(probes 251815:252171) 8.8462e-17 2.0881e-13 Actual Copy Change Given -0.60431 -0.15061 -0.70737 -0.72324 0.21663 -0.37646 -0.72868 -0.040764 -0.043867 -0.5045 -0.12457 -0.11387 -0.31173 -0.038274 -0.096104 -0.11233 -0.28746 -0.057466 -0.9264 -0.44693 0.00015477 -0.15806 -0.27122 -0.14266 0.0028755 -0.15181 -0.019731 -0.10419 -0.010718 -0.0984 -0.32573 -0.11979 -0.098107 -0.016987 0.0034242 0.0044399 -0.12536 -0.40152 -0.33812 -0.79422 -0.066319 -0.20839 0.10941 -0.5334 0.15506 -0.0081438 -0.058788 -0.12295 -0.060194 -0.29766 -0.6511 -0.12053 -0.014019 -0.006297 -0.21702 -0.21702 -0.36588 -0.091106 -0.29184 -0.10706 -0.32174 -0.85647 -0.12795 -0.41829 -0.070526 -0.027548 -0.89207 -0.049748 -0.42972 -0.18782 -0.35765 -0.31536 -0.37365 -0.17636 -0.14316 -0.27337 -0.092031 -0.23228 -0.28774 0.029767 -0.066834 -0.14167 0.0058554 -0.0047488 0.20957 -0.28758 -0.18775 -0.018738 -0.25244 -0.19368 -0.47204 -0.023077 -0.32025 -0.35991 -0.021405 -0.30265 -0.039078 -0.03161 0.25372 -0.168 0.085641 0.22146 8.8888e-05 -0.2314 -0.48411 -0.58334 0.037987 -0.18186 -0.34251 Deletion Peak 19 - CN values 21q11.2 chr21:9820002-14110000(probes 252098:252187) chr21:10330001-13999999(probes 252168:252172) chr21:7870001-13990000(probes 251815:252171) 7.6084e-09 0.00030284 Actual Copy Change Given -0.035742 -0.15635 -0.28755 -0.28492 0.67659 -0.24731 0.38952 0 -0.029513 -0.34078 -0.0060879 0.0012999 -0.03305 -0.016755 0.032214 -0.053037 -0.011855 0.0063588 -0.010236 3.6567 0.0022295 0.089079 -0.0098068 0.05584 -0.0079886 -0.13482 -0.01093 -0.34153 0.0053225 0.29126 0.034178 -0.29347 -0.19537 -0.011071 0.19107 -0.0011633 -0.0084212 -0.015533 0.14744 0.057806 0.02026 0.2271 -0.19819 0.31202 0.28511 -0.0039435 -0.002474 0.0088471 0.14817 0.16858 -0.14928 -0.4286 0 -0.0097089 -0.082174 0.4245 -0.33611 -0.058008 -0.14133 0.13249 0.34094 0.05777 0.0083171 0.16755 0.018422 0.0062166 -0.62871 0.20402 -0.031555 -1.0898 -0.0019894 -0.036057 -0.42945 0.2853 -0.27885 -0.34486 0.018482 -0.17773 0.11462 -0.0049314 0.47629 0.051311 0.040173 -0.15758 0.8951 0.095279 -0.25279 0.012049 0.1024 0.1722 -0.008726 -0.021449 -0.19923 0.002735 -0.028746 -0.3442 -0.0095213 -0.010598 0.33675 -0.073869 0.014952 0.13501 0.062543 1.1919 0.026693 -0.020086 -0.012753 -0.22338 1.0593 Deletion Peak 20 - CN values 22p11.2 chr22:10960002-16939999(probes 256454:256995) chr22:11890001-11960000(probes 256586:256596) chr22:11640001-12199999(probes 256548:256638) 2.1419e-07 1.9682e-07 Actual Copy Change Given -0.52973 -0.29281 -0.16087 -0.14216 0.20525 -0.016546 -0.38241 -0.11235 -0.067179 -0.36326 -0.24469 -0.066866 -0.087589 -0.0226 -0.080574 -0.044076 -0.081093 -0.74107 -0.82951 0.2144 -0.011782 -0.059855 -0.20385 -0.11855 -0.00085536 -0.075034 -0.054601 -0.093694 -0.021878 0.029437 -0.078766 -0.012219 -0.034315 -0.0093315 0.55898 -0.018951 -0.13536 -0.32111 -0.4267 0.070891 -0.6756 0.0097102 -0.16202 -0.30447 -0.018036 -0.047456 -0.037075 -0.10249 -0.082828 -0.067137 -0.57012 -0.18376 0.032809 -0.03877 -0.10053 -0.75902 0.15157 -0.036996 -0.063757 0.045543 -0.54161 -0.35267 -0.056168 0.07508 -0.017156 -0.020978 -0.27009 0.047767 -0.29076 0.31159 -0.0039545 -0.30274 -0.073545 -0.18658 0.20015 -0.19271 0.049103 -0.19827 -0.12651 0.084875 -0.10766 -0.025152 -0.044439 -0.049663 0.55492 0.14424 -0.30607 -0.0084519 -0.51647 -0.13742 0.057449 0.019689 -0.45665 -0.67707 -0.039958 -0.066154 -0.013523 0.36432 0.26527 -0.21576 -0.14553 0.096903 -0.17693 -0.6172 0.26662 -0.80667 -0.043146 -0.047601 0.090192 Deletion Peak 21 - CN values 22q13.32 chr22:43850001-50818468(probes 259119:259623) chr22:48520002-48559999(probes 259580:259582) chr22:43890001-50818468(probes 259123:259623) 0.014225 0.013998 Actual Copy Change Given -0.049084 -0.22431 -0.30645 -0.33791 -0.081152 -0.12904 -0.36857 0.013358 -0.16111 -0.23002 -0.022541 -0.0064525 0.096374 -0.038541 -0.14174 -0.024058 -0.079124 -0.41654 -0.80473 -0.035975 -0.00090757 0.078903 -0.21281 -0.33148 0.015231 -0.038431 -0.014929 0.0055365 0.012401 -0.5503 -0.039557 -0.23282 0.010725 -0.022598 -0.65599 0.0013939 -0.0052435 -0.22859 -0.30873 -0.39817 -0.081042 0.03895 -0.35548 -0.54435 0.012789 -0.022544 -0.40441 -0.074245 0.030034 -0.23995 -0.56055 -0.10077 0.15908 0.071758 -0.096695 -0.32758 -0.31594 0.045603 0.13608 -0.32788 -0.35839 -0.92644 -0.11415 -0.052936 0.045268 -0.0007193 -0.26273 0.0042159 -0.23947 -0.10114 -0.4628 0.042619 -0.016254 -0.33892 -0.18806 -0.33019 -0.079637 -0.23121 -0.12924 -0.0097665 -0.15157 -0.23544 -0.071309 -0.0084757 -0.24113 -0.28805 -0.19853 -0.0092493 -0.23395 0.11244 -0.20312 -0.25084 -0.045747 -0.29869 -0.27039 -0.0092486 -0.050524 -0.40218 -0.014689 -0.14445 0.1431 0.71264 -0.11685 -0.26773 -0.48526 0.87496 -0.00247 -0.19119 -0.029313 Deletion Peak 22 - CN values Xp22.33 chrX:1-150909999(probes 259624:271937) chrX:250001-3249999(probes 259660:259661) chrX:1-3269999(probes 259624:259663) 8.0641e-06 8.0641e-06 Actual Copy Change Given -0.076231 0.2008 0.23768 0.17296 0.30294 0.131 -0.17704 0.061855 -0.13297 0.49937 -0.054662 0.0037957 0.17949 -0.035563 -0.069065 -0.32207 0.02088 0.46047 -0.0013701 -0.011581 0.0061087 0.056635 0.057631 0.35084 -0.048835 0.07429 0.013191 0.0081057 -0.022259 -0.14903 0.04657 0.40181 -0.23174 0.0098621 -0.55724 0.050622 0.0038646 0.78772 0.13434 -0.011534 -0.10706 0.15066 0.070961 -0.31898 -0.11434 -0.0067314 0.77378 0.0062161 -0.37142 0.49093 0.34018 -0.2677 -0.0011729 -0.36783 -0.18453 0.090915 0.30568 0.0085561 -0.27232 0.1473 0.66881 -0.093176 -0.50988 1.0638 0.029263 -0.027928 0.31318 -0.031254 0.22945 -0.59956 -0.011861 0.3826 0.030352 -0.10365 -0.16281 0.33912 0.23476 0.46496 -0.05884 0.22993 0.015625 0 0.1296 0.10017 0.0019624 0.096073 0.5356 0.050296 0.09147 -0.23332 -0.18659 -0.30003 0.15131 0.33875 0.46531 -0.071669 0.035406 -0.016321 -0.39934 0.16252 -0.046274 -0.040557 -0.17682 0.0097305 0.52633 0.010678 0.47661 0.20454 0.39631 Deletion Peak 23 - CN values Xq28 chrX:154570002-155999999(probes 272214:272228) chrX:155670001-155960000(probes 272220:272221) chrX:155670002-155969999(probes 272221:272222) 0.023264 0.023264 Actual Copy Change Given 0.29676 0.3935 0.21964 -0.21345 0.10705 -0.067499 0.68413 0.039197 0.033305 0.35149 0.14259 0.791 0.17705 0.21402 0.33215 -0.31076 0.16743 0.42728 0.044507 0.20394 0.59553 -0.062585 0.16153 0.32081 -0.057202 0.3641 0.0050536 -0.0075786 -0.022653 -0.011717 0.36982 0.078099 -0.23861 0.0062682 -0.32774 -0.23232 0.0019623 -0.036412 -0.30857 -0.40915 -0.27124 0.73848 0.47743 0.051097 -0.053913 0.043658 0.41765 0.0024393 0.35872 0.21525 -0.4114 0.30219 -0.2649 -0.3846 0.147 0.39533 -0.30543 0.19653 0.27898 0.43664 0.0053894 0.60556 -0.01392 -0.1356 0.02437 -0.038475 -0.14794 -0.038285 -0.25833 0.36005 0.041107 -0.16871 -0.38933 0.026385 -0.48686 0.25987 0.56649 -0.095009 0.066917 -0.21182 -0.39141 -0.15028 0.12204 -0.3876 -0.42803 0.8323 0.30014 0.068226 0.31677 0.083404 -0.083837 0.2882 -0.15684 -0.0089724 0.45243 0.26047 0.034615 0.5264 0.36563 0.17917 -0.045401 -0.04527 0.044191 0.61188 0.48191 1.9462 0.47211 0.20386 0.37422 Deletion Peak 24 - CN values Yq11.223 chrY:23190002-23940000(probes 274829:274921) chrY:23200002-23309999(probes 274830:274844) chrY:11870001-26650000(probes 273583:275238) 3.7439e-09 3.6266e-09 Actual Copy Change Given 0.42025 0.26584 -0.75621 -0.65255 0.037396 -0.41226 -1.1098 -0.46116 -0.4136 -0.28382 0.01357 1.4426 -0.57824 0.54201 -0.029991 0.37164 0.28324 -0.35004 -0.12904 1.3669 0.13688 0.0065252 -0.19696 0.0011135 -0.48738 -0.58021 -0.26057 -0.14006 -0.62789 -0.58821 0.54432 0.29547 -0.091415 -0.061513 -0.51384 -0.46536 -0.15961 -0.82396 -0.81834 -0.89877 -0.71403 -0.90908 -0.053577 0.081298 -0.31814 -0.36576 -0.032367 -0.18298 -0.79043 -0.31377 0.92897 -0.76385 -0.62153 -0.49124 -0.61181 -0.14038 0.36832 0.056669 -0.10368 0.12299 -0.75959 -1.2149 -0.94913 -0.3663 -0.32211 -0.12047 -1.0159 -0.86885 -0.79545 0.36579 -0.5768 -0.3753 -0.86011 -0.48141 -0.70549 0.34754 -0.4909 -1.006 -0.026357 -0.3791 -0.75916 -0.47418 -0.05195 -0.87145 -0.91409 0.15897 -1.0087 0.056727 0.17351 1.1855 1.1584 -0.27051 -0.60695 -0.34117 0.0036615 0.34451 0.016823 -0.13768 1.9498 -0.74115 -0.96958 1.0401 -0.15054 -0.21919 -0.10036 -0.97429 0.26488 0.17493 0.35921