index chromosome region_start region_end peak_start peak_end enlarged_peak_start enlarged_peak_end n_genes_in_region genes_in_region n_genes_in_peak genes_in_peak n_genes_on_chip genes_on_chip top 3 1 1 197050001 199460000 198980001 199360000 192150000 210780001 199 ADORA1,ATP2B4,AVPR1B,C4BPA,C4BPB,CACNA1S,CD34,CHI3L1,CHIT1,CR1,CR1L,CR2,CSRP1,CTSE,CD55,EIF2D,ELF3,ELK4,F13B,FMOD,NR5A2,GPR25,CFH,CFHR1,CFHR2,HSD11B1,IL10,IRF6,KCNH1,KISS1,LAD1,LAMB3,CD46,MDM4,MYBPH,MYOG,PPP1R12B,CDK18,PFKFB2,PIGR,PIK3C2B,PKP1,PLXNA2,PRELP,PTPN7,PTPRC,RABIF,RBBP5,REN,RGS1,RGS2,RGS13,RNPEP,SNRPE,TROVE2,CNTN2,TNNI1,TNNT2,BTG2,DYRK3,PPFIA4,B3GALT2,RAB29,FCMR,MAPKAPK2,GPR37L1,SOX13,IKBKE,ZC3H11A,TMCC2,KIF14,TIMM17A,LRRN2,KDM5B,CFHR4,CFHR3,IL24,PLEKHA6,KIF21B,NFASC,CAMSAP2,SRGAP2,CRB1,ZNF281,PHLDA3,DSTYK,LMOD1,OPTC,DIEXF,UBE2T,IL19,G0S2,IL20,GLRX2,ADIPOR1,UCHL5,CYB5R1,LAX1,KLHDC8A,ETNK2,YOD1,IPO9,HHAT,C1orf106,SERTAD4,LHX9,CAMK1G,KLHL12,LGR6,RGS18,NUCKS1,C1orf116,CDC73,TRAF3IP3,CFHR5,NUAK2,DDX59,RASSF5,FCAMR,LINC00260,PPP1R15B,SLC45A3,NAV1,IGFN1,TMEM183A,LEMD1,SLC26A9,ATP6V1G3,ARL8A,SYT2,LINC00628,GOLT1A,NEK7,C1orf74,LOC148696,LOC148709,PTPRVP,MFSD4A,PM20D1,SHISA4,DENND1B,TMEM9,SLC41A1,SYT14,ASPM,LINC00303,LEMD1-AS1,LOC284578,LOC284581,RAB7B,KCNT2,ZBTB41,RPS10P7,C1orf53,TMEM81,MIR181B1,MIR205,MIR181A1,MIR29B2,MIR29C,RGS21,C1orf186,MIR135B,LINC00862,SERTAD4-AS1,MGAT4EP,MIR205HG,ASCL5,SNORA77,FAM72A,LINC01136,C1orf132,MIR181A1HG,MIR1231,MIR1278,ZBED6,MIR4260,PCAT6,LOC100506747,LINC01353,MIR4426,MIR4735,MIR5191,IPO9-AS1,BLACAT1,LINC01031,LOC101929224,LOC101929441,LOC101930114,MIR6740,MIR6769B,MIR6739,LINC01032,LINC01222,LOC103021295,LOC103021296,LINC01221,LOC105372897,SCARNA18B, 2 LINC01222,LINC01221, 2 5 1 3410001 1290000 1300000 1030000 1300001 8 TERT,SLC12A7,NKD2,SLC6A19,SLC6A18,MIR4457,MIR4635,CTD-3080P12.3, 7 TERT,SLC12A7,NKD2,SLC6A19,SLC6A18,MIR4635,CTD-3080P12.3, 3 5 171880001 173350001 172740001 172900000 169560000 181370001 169 BNIP1,CANX,CLTB,NKX2-5,DBN1,DOCK2,DRD1,DUSP1,F12,FGFR4,FOXI1,FLT4,GABRP,GRK6,GRM6,HK3,HNRNPAB,HNRNPH1,HRH2,KCNMB1,LCP2,LTC4S,MGAT1,MSX2,NPM1,MAPK9,PROP1,SLC34A1,SNCB,STK10,ZNF354A,STC2,FGF18,SQSTM1,ATP6V0E1,PDLIM7,ADAMTS2,MAML1,GFPT2,RACK1,RGS14,CPLX2,BTNL3,LMAN2,MGAT4B,B4GALT7,RNF44,TBC1D9B,N4BP3,FAF2,FBXW11,ZNF346,TSPAN17,OR2V1,PRELID1,TLX3,KCNIP1,ZNF354C,RPL26L1,C5orf45,DDX41,NOP16,HMP19,UIMC1,RAB24,NEURL1B,FAM193B,TMED9,CDHR2,SPDL1,NHP2,RNF130,KIAA1191,ERGIC1,CLK4,CNOT6,NSD1,GMCL1P1,RMND5B,RANBP17,BTNL8,DOK3,ZFP2,RUFY1,CPEB4,PRR7,OR4F16,TRIM7,MXD3,THOC3,TRIM52,PHYKPL,UNC5A,TRIM41,BOD1,COL23A1,UBTD2,SCGB3A1,SFXN1,GPRIN1,ZNF354B,C5orf47,C5orf58,OR2Y1,CREBRF,BTNL9,HIGD2A,FAM153B,LOC202181,EIF4E1B,RASGEF1C,LINC01366,EFCAB9,SH3PXD2B,LOC285593,FAM153A,ARL10,OR2V2,ZNF454,C5orf60,PRR7-AS1,PFN3,ZNF879,SIMC1,FLJ16171,MIR340,SNORD95,SNORD96A,LOC643201,ZFP62,SMIM23,CBY3,FAM153C,SNORA74B,LOC728554,AACSP1,LINC00847,OR4F29,FAM196B,LOC100132062,LOC100268168,LOC100288254,MIR1229,MIR1271,MIR4281,MIR3912,LINC01187,LOC100507387,TRIM52-AS1,MIR4634,MIR4638,MIR378E,MIR5003,HEIH,LOC100996385,LOC100996419,CTD-2270F17.1,LOC101928093,LINC01484,LINC01485,LINC01411,LOC101928445,CTC-338M12.4,MIR8056,MIR8089,LINC01574,LOC102577426,LOC105377716,LOC105377763, 5 DUSP1,NEURL1B,ERGIC1,MIR5003,LOC101928093, 4 6 41590001 42010000 41930001 41990000 41540000 41990001 13 BYSL,CCND3,MDFI,PGC,TFEB,MED20,FRS3,USP49,PRICKLE4,FOXP4,TOMM6,MIR4641,FOXP4-AS1, 2 BYSL,CCND3, 5 7 52070001 63670001 54720001 55130000 54440000 55760001 10 EGFR,SEC61G,LANCL2,VOPP1,VSTM2A,VSTM2A-OT1,FKBP9P1,EGFR-AS1,LOC100996654,ELDR, 3 EGFR,SEC61G,LOC100996654, 6 7 65780001 65850001 65780001 65830000 65780000 65830001 1 LOC441242, 0 [LOC441242] 7 8 91930001 145138636 128160001 128200000 128150000 128210001 1 MIR1208, 0 [MIR1208] 8 8 91930001 145138636 145079266 145138636 144180001 145138636 46 GPT,HSF1,TONSL,RPL8,ZNF7,ZNF16,DGAT1,FOXH1,RECQL4,LRRC14,BOP1,FBXL6,COMMD5,CPSF1,CYHR1,VPS28,SLC39A4,ZNF250,C8orf33,SLC52A2,ARHGAP39,ZNF34,SCRT1,PPP1R16A,ZNF251,KIFC2,MFSD3,ADCK5,ZNF252P,TMED10P1,ZNF252P-AS1,ZNF517,TMEM249,C8orf82,LRRC24,SCX,MROH1,MIR939,TONSL-AS1,MIR1234,LOC101928902,MIR6848,MIR7112,MIR6850,MIR6893,MIR6849, 46 GPT,HSF1,TONSL,RPL8,ZNF7,ZNF16,DGAT1,FOXH1,RECQL4,LRRC14,BOP1,FBXL6,COMMD5,CPSF1,CYHR1,VPS28,SLC39A4,ZNF250,C8orf33,SLC52A2,ARHGAP39,ZNF34,SCRT1,PPP1R16A,ZNF251,KIFC2,MFSD3,ADCK5,ZNF252P,TMED10P1,ZNF252P-AS1,ZNF517,TMEM249,C8orf82,LRRC24,SCX,MROH1,MIR939,TONSL-AS1,MIR1234,LOC101928902,MIR6848,MIR7112,MIR6850,MIR6893,MIR6849, 9 11 68870001 70180001 68870001 69120000 68870000 70340001 22 CCND1,FGF3,FGF4,IGHMBP2,PPFIA1,FADD,FGF19,MYEOV,ANO1,MRGPRD,MRGPRF,MRPL21,TPCN2,ORAOV1,LOC338694,ANO1-AS2,MIR548K,MIR3164,MRGPRF-AS1,LINC01488,LOC101928443,LOC102724265, 7 IGHMBP2,MRGPRD,MRGPRF,MRPL21,TPCN2,MIR3164,MRGPRF-AS1, 10 12 66430001 72250001 69120001 69200000 67140000 70850001 37 CPM,IFNG,LYZ,MDM2,CNOT2,PTPRB,PTPRR,RAP1B,YEATS4,DYRK2,CCT2,FRS2,CPSF6,KCNMB4,IL22,SLC35E3,IL26,CAND1,MDM1,NUP107,RAB3IP,BEST3,MYRFL,LRRC10,LOC100130075,MIR1279,SNORA70G,MIR3913-2,MIR3913-1,LOC100507175,LOC100507195,LOC100507250,IFNG-AS1,LOC101927901,LINC01479,LOC101928002,LINC01481, 0 [CPSF6] 11 12 32310001 32340001 32310001 32320000 32310000 32630001 2 BICD1,FGD4, 1 BICD1, 12 12 66430001 72250001 69120001 69200000 69120000 69200001 0 [CPSF6] 0 [CPSF6] 13 14 33360001 39110001 36610001 36630000 35990000 37160001 10 PAX9,NKX2-1,NKX2-8,MBIP,SLC25A21,SFTA3,NKX2-1-AS1,MIR4503,PTCSC3,LINC00609, 0 [NKX2-8] 14 14 106879059 107043718 106879059 107043718 105530001 107043718 14 ELK2AP,ADAM6,FAM30A,TMEM121,LINC00226,LINC00221,MIR4507,MIR4538,MIR4539,MIR4537,MIR5195,MIR7641-2,MIR8071-1,LOC105370697, 14 ELK2AP,ADAM6,FAM30A,TMEM121,LINC00226,LINC00221,MIR4507,MIR4538,MIR4539,MIR4537,MIR5195,MIR7641-2,MIR8071-1,LOC105370697, 15 14 33360001 39110001 36610001 36630000 36610000 36630001 0 [NKX2-8] 0 [NKX2-8] 16 17 38710001 39880001 39340001 39860000 38710000 39860001 39 CACNB1,ERBB2,GRB7,LASP1,MLLT6,NEUROD2,PNMT,MED1,PSMB3,RPL19,PCGF2,PIP4K2B,TCAP,RPL23,STARD3,IKZF3,CDK12,CWC25,PLXDC1,PPP1R1B,MIEN1,FBXL20,PGAP3,ZPBP2,CISD3,LRRC37A11P,STAC2,C17orf98,ARL5C,FBXO47,SNORA21,LOC100131347,LINC00672,MIR4728,MIR4726,MIR4734,MIR4727,MIR6779,LOC105371766, 14 ERBB2,GRB7,NEUROD2,PNMT,MED1,TCAP,STARD3,IKZF3,CDK12,PPP1R1B,MIEN1,FBXL20,PGAP3,MIR4728, 17 19 29030001 29890001 29760001 29770000 29030000 29870001 7 CCNE1,UQCRFS1,POP4,PLEKHF1,C19orf12,LOC284395,VSTM2B, 0 [CCNE1] 18 20 56580001 64444167 57720001 57760000 57240000 59030001 35 ATP5E,BMP7,CTSZ,GNAS,PCK1,RAE1,STX16,VAPB,SPO11,PRELID3B,NELFCD,PPP4R1L,RBM38,PMEPA1,RAB22A,LOC79160,NPEPL1,TUBB1,ZBP1,C20orf85,CTCFL,ANKRD60,APCDD1L-AS1,GNAS-AS1,APCDD1L,MIR296,MIR298,MIR4325,MTRNR2L3,SLMO2-ATP5E,STX16-NPEPL1,MIR4532,LOC101927932,LOC105372695,NKILA, 0 [NKILA] 19 20 56580001 64444167 63580001 63580001 62830000 64444167 68 hsa-mir-941-3,CHRNA4,COL9A3,EEF1A2,NPBWR2,KCNQ2,MYT1,OPRL1,PTK6,SRMS,TCEA2,TPD52L2,TNFRSF6B,ARFRP1,RGS19,TCFL5,DIDO1,PRPF6,GMEB2,STMN3,RTEL1,SOX18,YTHDF1,LIME1,UCKL1,GID8,PCMTD2,ARFGAP1,SLC2A4RG,ZNF512B,COL20A1,SLC17A9,LOC63930,FNDC11,PPDPF,BIRC7,DNAJC5,ZGPAT,HELZ2,BHLHE23,NKAIN4,ZBTB46,SAMD10,ABHD16B,LINC00266-1,LKAAEAR1,LINC00176,MIR124-3,MIR647,HAR1A,HAR1B,UCKL1-AS1,MIR941-1,MIR941-4,MIR941-2,MIR941-3,LOC100130587,DPH3P1,LINC00029,LINC01056,FLJ16779,MIR1914,MIR4326,MIR3196,LOC100505771,RTEL1-TNFRSF6B,ZBTB46-AS1,MIR6813, 38 hsa-mir-941-3,NPBWR2,MYT1,OPRL1,TCEA2,TPD52L2,TNFRSF6B,ARFRP1,RGS19,PRPF6,GMEB2,STMN3,RTEL1,SOX18,LIME1,UCKL1,PCMTD2,SLC2A4RG,ZNF512B,DNAJC5,ZGPAT,ZBTB46,SAMD10,ABHD16B,LINC00266-1,LKAAEAR1,LINC00176,MIR647,UCKL1-AS1,MIR941-1,MIR941-4,MIR941-2,MIR941-3,MIR1914,LOC100505771,RTEL1-TNFRSF6B,ZBTB46-AS1,MIR6813, 20 21 6740001 6960001 6810001 6940000 6790000 6940001 1 MIR8069-1, 1 MIR8069-1, 21 X 144270001 153460000 145760001 146020000 108160000 156040895 424 hsa-mir-220a,AGTR2,ABCD1,SLC25A5,XIAP,ARHGAP4,ATP2B3,ATP6AP1,AVPR2,BGN,BRS3,CAPN6,CD40LG,CDR1,CETN2,CLIC2,CNGA2,COL4A5,COL4A6,TEX28,DCX,DKC1,DNASE1L1,DUSP9,ELF4,EMD,F8,F9,ACSL4,GPC4,FGF13,FHL1,FLNA,FMR1,AFF2,G6PD,GABRA3,GABRE,OPN1MW,GDI1,GPC3,GLUD2,GRIA3,GUCY2F,HCFC1,HMGB3,HPRT1,HTR2C,IDH3G,IDS,IGSF1,IL9R,IL13RA1,IL13RA2,IRAK1,L1CAM,LAMP2,SH2D1A,MAGEA1,MAGEA2,MAGEA3,MAGEA4,MAGEA5,MAGEA6,MAGEA8,MAGEA9,MAGEA10,MAGEA11,MAGEA12,MCF2,MECP2,MPP1,MTCP1,MTM1,NDUFA1,OCRL,PAK3,PLS3,PLXNB3,OPN1LW,RENBP,RPL10,RPL39,SLC6A8,SMARCA1,SOX3,SRD5A1P1,SSR4,VAMP7,TAZ,TDGF1P3,TRPC5,UBE2A,VBP1,XPNPEP2,ZIC3,ZNF75D,RNF113A,ZNF185,NAA10,F8A1,UBL4A,TMEM187,LAGE3,SLC10A3,TKTL1,CUL4B,IRS4,IKBKG,MTMR1,APLN,FAM127A,SLC25A14,FAM50A,AIFM1,TMEM257,GPR50,RAB33A,ARHGEF6,MAGEC1,AMMECR1,ZBTB33,MAMLD1,BCAP31,TENM1,SPRY3,SLC9A6,ENOX2,STAG2,PLAC1,UTP14A,ZNF275,PGRMC1,TREX2,SLC6A14,SEPT6,ATP1B4,KCNE5,LDOC1,FAM127B,SRPK3,SNORA70,SNORA69,SNORD61,RNU6-1,RBMX,HTATSF1,MCTS1,C1GALT1C1,PNMA3,SPANXA1,CTAG2,NSDHL,ZDHHC9,LUZP4,TFDP3,MAGEC2,VGLL1,RBMX2,STK26,SASH3,WDR44,CT55,TMEM255A,TMLHE,SAGE1,PLXNA3,HAUS7,ZNF280C,MBNL3,FAM45BP,GABRQ,NXT2,NKRF,MOSPD1,THOC2,KIAA1210,RGAG1,PDZD4,LRCH2,RAP2C,FAM3A,BCORL1,CXorf56,SPANXD,SPANXC,UPF3B,FUNDC2,PRRG3,BRCC3,NKAP,MAP7D3,LONRF3,ALG13,GPR101,CD99L2,USP26,TMEM164,PHF6,RHOXF2,TMEM185A,SLITRK2,MIR503HG,PNMA6A,FATE1,HS6ST2,FRMD7,KLHL13,CHRDL1,CXorf40A,FAM58A,MMGT1,PNMA5,ATG4A,RAB39B,SLITRK4,SPANXN3,MAGEC3,PASD1,DCAF12L1,ADGRG4,GAB3,PNCK,ZFP92,ACTRT1,GPR119,RBMXL3,DOCK11,AMOT,CSAG1,FMR1NB,LINC00889,ARHGAP36,AKAP14,RHOXF1,NKAPP1,CH17-340M24.3,FAM122B,FAM122C,ZCCHC12,CT83,SLC25A43,INTS6L,ZNF449,VMA21,CTAG1A,CT47A11,MAGEA2B,ATP11C,LINC00632,FIRRE,DCAF12L2,LOC340581,ZCCHC16,LHFPL1,SOWAHD,OR13H1,CCDC160,CXorf66,LOC389895,UBE2NL,CSAG3,SMIM10L2A,LINC00890,MIR105-1,MIR105-2,MIR106A,MIR19B2,MIR224,MIR92A2,FAM127C,CT45A3,CT45A5,SPANXN4,H2AFB2,H2AFB1,F8A2,SPANXN1,SPANXN2,MIR424,CT45A6,CT45A1,CXorf40B,MIR448,MIR450A1,MIR363,MIR20B,MIR18B,MIR452,MIR450A2,MIR503,MIR504,MIR505,MIR513A1,MIR513A2,MIR506,MIR507,MIR508,MIR509-1,MIR510,MIR514A1,MIR514A2,MIR514A3,SPANXA2-OT1,DANT2,CT47B1,SMIM10,SMIM10L2B,LOC645188,CT47A7,MIR542,SNORA35,SNORA36A,SNORA56,SNORD96B,MIR652,DDX11L16,CT47A10,CT47A8,CT47A6,CT47A5,CT47A4,CT47A3,CT47A2,CT47A1,MAGEA9B,OPN1MW2,SPANXB1,CT45A2,MIR767,MIR766,FMR1-AS1,MIR509-2,MIR450B,MIR890,MIR891B,MIR888,MIR892B,MIR934,MIR509-3,MIR891A,MIR892A,LOC100126447,WASIR1,LINC00892,GPR50-AS1,CXorf51A,LINC00633,TEX13C,FGF13-AS1,HSFX2,PRR32,CSAG4,LINC00893,SMIM9,FAM223A,CMC4,LINC00894,LOC100287728,MIR1184-1,MIR513C,MIR1912,MIR1298,MIR320D2,MIR1277,MIR1911,MIR1264,SLC25A5-AS1,MIR718,MIR513B,MIR764,MIR2114,TRPC5OS,MIR514B,MIR3202-2,MIR4330,MIR1184-3,MIR1184-2,MIR3202-1,MIR4329,MIR3672,HSFX1,LINC00629,LOC100506790,CT47A12,MAGEA10-MAGEA5,MIR4454,MIR3978,MIR664B,HCFC1-AS1,HS6ST2-AS1,DDX26B-AS1,LCA10,CT45A7,OPN1MW3,LINC00850,MAGEA8-AS1,PLS3-AS1,LOC101927830,LINC01285,LOC101928336,LOC101928358,LOC101928402,LOC101928437,LOC101928495,RAP2C-AS1,LOC101928917,RHOXF1P1,RHOXF1-AS1,RNU6-7,MIR6087,MIR6858,MIR892C,CT45A10,CT45A9,RNU6-2,LINC01201,LINC01402,LOC105373338,LOC105373368,LOC105373378,LOC105373383,LOC105377213,XACT, 8 TMEM257,SLITRK2,MIR890,MIR891B,MIR888,MIR892B,MIR892A,MIR892C, 22 X 91530000 96390000 91990001 92050000 90330000 96370001 8 NAP1L3,PCDH11X,PABPC5,FAM133A,BRDTP1,MIR548M,MIR4454,PABPC5-AS1, 1 PCDH11X, 23 Y 20060001 20220001 20130001 20170000 20130000 20170001 0 [TTTY10] 0 [TTTY10]