Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	11LU035_TP	C3L-00009_TP	C3L-00080_TP	C3L-00094_TP	C3L-00095_TP	C3L-00140_TP	C3L-00144_TP	C3L-00263_TP	C3L-00279_TP	C3L-00368_TP	C3L-00412_TP	C3L-00510_TP	C3L-00893_TP	C3L-00913_TP	C3L-01330_TP	C3L-01682_TP	C3L-01683_TP	C3L-01889_TP	C3L-01924_TP	C3L-02219_TP	C3L-02345_TP	C3L-02348_TP	C3L-02350_TP	C3L-02365_TP	C3N-00169_TP	C3N-00175_TP	C3N-00180_TP	C3N-00199_TP	C3N-00203_TP	C3N-00217_TP	C3N-00294_TP	C3N-00546_TP	C3N-00547_TP	C3N-00549_TP	C3N-00551_TP	C3N-00560_TP	C3N-00578_TP	C3N-00580_TP	C3N-00704_TP	C3N-00737_TP	C3N-00738_TP	C3N-00959_TP	C3N-01016_TP	C3N-01071_TP	C3N-01488_TP	C3N-01799_TP	C3N-02003_TP	C3N-02149_TP	C3N-02155_TP	C3N-02380_TP	C3N-02421_TP	C3N-02423_TP	C3N-02424_TP	C3N-02582_TP	C3N-02586_TP	
Amplification Peak  1	1p34.2 	chr1:40250001-40470000(probes 3488:3508)        	chr1:40260001-40350000(probes 3489:3497)        	chr1:39810001-42100000(probes 3442:3671)        	0.026844	   0.026844		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	1	0	0	0	1	0	1	0	1	0	1	0	0	0	0	0	0	1	0	0	2	0	0	2	0	0	0	0	2	0	1	0	0	0	0	0	
Amplification Peak  2	1q21.3 	chr1:119990001-156250000(probes 11247:11871)  	chr1:155000001-155010000(probes 11743:11744)  	chr1:119990002-164329999(probes 11248:12671)  	0.0068127	  0.0068127		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	2	1	1	1	1	0	1	1	1	1	2	0	1	1	0	1	2	1	1	1	0	1	2	2	1	2	0	2	1	1	1	1	1	1	1	1	2	2	1	1	1	1	1	1	0	1	2	1	1	1	0	1	0	
Amplification Peak  3	5p15.33	chr5:1-1880000(probes 77564:77598)                      	chr5:1290001-1310000(probes 77581:77583)          	chr5:1-8050000(probes 77564:78205)                      	0.007977	   0.007977		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	2	1	1	0	2	0	1	2	0	0	0	1	0	1	0	0	1	2	0	0	1	2	1	2	1	1	1	0	1	1	1	1	2	2	0	2	1	1	1	0	0	1	0	2	0	1	0	1	1	1	1	1	2	
Amplification Peak  4	5q35.3 	chr5:169550001-181538259(probes 92926:93983)  	chr5:180830001-180840000(probes 93947:93948)  	chr5:179500001-181380000(probes 93824:93962)  	0.043692	   0.043692		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	1	0	0	1	0	0	0	1	1	0	0	0	0	0	0	0	0	0	1	2	1	1	0	0	0	
Amplification Peak  5	7p21.2 	chr7:15470001-16640000(probes 110836:110950)    	chr7:15890001-15960000(probes 110880:110885)    	chr7:15530001-16400000(probes 110841:110924)    	0.093069	   0.093069		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	1	1	0	2	0	1	0	0	0	0	0	1	0	0	0	1	1	1	1	0	2	1	1	0	1	0	0	2	1	2	2	0	1	1	1	0	1	1	0	1	0	1	0	0	1	2	1	1	1	1	1	2	
Amplification Peak  6	8p12   	chr8:35270001-35330000(probes 125884:125890)    	chr8:35280001-35320000(probes 125885:125889)    	chr8:35280001-35349999(probes 125885:125892)    	0.13044	    0.13044		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	2	0	0	2	1	0	0	0	1	0	1	0	0	0	0	0	2	0	0	0	0	0	1	0	0	0	
Amplification Peak  7	8q24.21	chr8:126330001-128980000(probes 134719:135001)	chr8:128120001-128190000(probes 134912:134919)	chr8:90670001-145138636(probes 131118:136403)  	6.7019e-05	 7.7449e-05		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	0	1	0	0	0	0	0	0	0	2	0	2	0	0	0	1	0	2	0	0	2	0	2	0	0	2	1	0	1	1	1	1	1	1	1	1	0	0	0	1	1	0	2	0	1	1	1	1	2	1	2	2	
Amplification Peak  8	8q24.3 	chr8:144170002-145138636(probes 136396:136403)	chr8:144180002-145138636(probes 136397:136403)	chr8:90670001-145138636(probes 131118:136403)  	0.0014694	   0.098171		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	1	1	1	1	0	1	0	0	0	2	0	1	0	0	0	1	0	1	0	0	2	0	1	0	0	0	1	0	1	2	1	1	2	1	2	1	0	0	0	2	1	0	1	1	1	1	1	1	1	1	2	2	
Amplification Peak  9	11q13.3	chr11:68840001-70000000(probes 164176:164294)  	chr11:69070001-69620000(probes 164201:164252)  	chr11:68110001-71090000(probes 164093:164411)  	0.0073451	  0.0073451		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	2	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	1	0	0	1	0	1	1	0	1	2	0	0	1	1	1	0	1	1	1	0	0	0	1	0	0	0	2	1	0	0	1	1	2	1	0	
Amplification Peak 10	12q15  	chr12:68790001-70370000(probes 176481:176648)  	chr12:69860001-70070000(probes 176595:176616)  	chr12:62600001-72260000(probes 175859:176829)  	0.0023524	  0.0023524		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	2	2	1	0	0	0	0	0	0	0	0	0	1	0	1	0	2	0	2	0	0	0	0	0	0	0	0	0	0	0	0	1	1	0	0	1	0	0	0	0	0	1	0	1	2	0	0	0	0	0	0	1	1	0	
Amplification Peak 11	14q13.3	chr14:35850001-37140000(probes 196463:196613)  	chr14:36350001-36390000(probes 196523:196527)  	chr14:28220001-40180000(probes 195646:196911)  	6.7019e-05	 6.7019e-05		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	2	2	1	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	2	1	1	1	1	1	1	0	0	1	0	0	1	1	1	1	2	1	0	2	1	0	0	0	2	2	0	1	1	1	1	0	
Amplification Peak 12	17q25.1	chr17:37630001-83257441(probes 221659:225837)  	chr17:73830001-75640000(probes 225076:225170)  	chr17:66080001-75910000(probes 224312:225200)  	0.051285	   0.051285		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	1	0	0	1	0	1	0	0	1	0	0	1	1	0	2	1	0	1	0	1	1	1	1	0	0	0	0	1	0	0	1	1	0	0	1	0	1	0	1	0	1	1	1	1	1	1	1	1	1	0	1	0	
Amplification Peak 13	19q12  	chr19:29620001-29880000(probes 234856:234887)  	chr19:29690001-29770000(probes 234864:234871)  	chr19:29630001-29899999(probes 234857:234889)  	0.029937	   0.029937		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	1	0	0	1	0	1	0	0	0	0	2	0	0	0	0	1	1	1	0	0	0	0	1	0	2	1	0	0	1	1	0	0	2	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	
Amplification Peak 14	Xp22.33	chrX:1-150000(probes 251625:251645)                      	chrX:1-120000(probes 251625:251640)                      	chrX:1-249999(probes 251625:251657)                      	0.079768	   0.079768		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	1	1	2	1	1	0	0	0	0	0	0	1	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	1	0	1	2	1	0	0	0	0	0	1	1	0	0	1	1	0	1	1	0	0	1	1	
Amplification Peak 15	Xq25   	chrX:99980002-144090000(probes 259097:262896)  	chrX:126570001-126730000(probes 261509:261521)	chrX:104380001-144100000(probes 259511:262898)	0.010447	    0.13044		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	2	1	0	0	0	0	1	0	0	0	2	0	1	1	0	0	0	1	0	0	0	0	1	0	0	2	1	0	1	1	0	1	0	1	1	0	0	1	0	0	1	1	0	1	0	1	1	0	0	1	0	1	2	
Amplification Peak 16	Xq27.3 	chrX:145300001-156040895(probes 263006:263814)	chrX:145990001-146020000(probes 263080:263083)	chrX:144170001-156040895(probes 262907:263814)	0.0064097	   0.072651		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	0	1	0	0	1	0	1	0	0	0	2	0	1	1	0	0	0	1	0	0	0	0	1	0	0	2	1	1	1	2	1	1	0	1	1	2	0	1	0	0	1	0	0	1	0	0	1	0	1	1	0	1	2	
Amplification Peak 17	Yq12   	chrY:21920002-56790000(probes 266158:269709)    	chrY:26630001-26680000(probes 266691:266697)    	chrY:26310001-26710000(probes 266653:266700)    	0.10551	    0.10551		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	2	0	1	0	0	1	0	1	0	0	0	0	0	1	1	1	0	0	0	0	0	0	0	1	0	0	2	0	1	0	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak  1	1p13.3  	chr1:55210001-155800000(probes 4973:11823)     	chr1:108800001-109250000(probes 10148:10185)    	chr1:99970001-117589999(probes 9362:11007)       	0.014105	   0.014105		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	1	0	0	1	0	1	0	1	1	0	0	1	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	0	1	0	1	0	1	0	1	0	
Deletion Peak  2	3p24.1  	chr3:1-89419999(probes 42198:50262)                    	chr3:28570001-28799999(probes 44436:44457)        	chr3:1-30380000(probes 42198:44605)                      	0.0092832	  0.0094348		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	1	0	0	0	1	0	1	0	0	1	1	0	0	0	0	1	1	0	0	1	1	0	1	1	1	1	0	0	1	1	1	1	0	1	1	1	0	0	1	0	0	0	0	1	1	1	0	0	0	1	0	
Deletion Peak  3	4q35.2  	chr4:187670001-190179999(probes 77531:77556)  	chr4:187840002-190120000(probes 77549:77550)    	chr4:187850002-190130000(probes 77550:77551)    	0.00097854	 0.00097854		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	0	0	0	0	0	1	1	1	0	1	0	1	0	0	1	1	0	0	0	0	1	1	0	0	0	1	0	0	1	1	0	1	0	1	1	1	1	0	1	1	0	0	0	0	0	0	0	0	0	1	1	
Deletion Peak  4	5q11.2  	chr5:51390001-65630000(probes 81674:83031)      	chr5:58950002-59050000(probes 82432:82443)        	chr5:58990001-59430000(probes 82437:82477)        	0.028309	   0.027595		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	0	1	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	0	1	0	1	1	1	1	0	0	0	0	1	0	0	0	1	1	0	0	1	0	1	0	
Deletion Peak  5	6q16.3  	chr6:63630002-132420000(probes 99558:106150)   	chr6:104920002-104959999(probes 103446:103449)  	chr6:64460001-132280000(probes 99645:106139)     	0.00049839	 0.00047709		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	1	0	1	0	0	1	1	1	1	0	1	1	0	1	1	1	1	0	1	1	1	0	0	0	0	1	1	0	0	1	0	0	0	1	0	1	0	
Deletion Peak  6	8p23.1  	chr8:1-38539999(probes 123155:126202)                  	chr8:6790002-6850000(probes 123486:123489)          	chr8:80002-30989999(probes 123165:125463)           	0.00016443	    0.12325		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	1	1	1	0	1	1	1	0	0	0	0	1	0	1	0	0	1	1	1	1	1	0	0	0	1	1	1	1	0	1	0	0	1	0	1	1	0	
Deletion Peak  7	8p21.2  	chr8:1-34870000(probes 123155:125854)                  	chr8:25340001-25519999(probes 124900:124917)      	chr8:80002-30989999(probes 123165:125463)           	0.00041377	   0.015266		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	0	0	0	0	0	0	0	0	0	1	0	0	0	1	1	1	0	0	1	1	0	0	0	1	1	0	1	0	0	1	1	1	1	1	0	0	0	1	1	1	1	0	1	0	1	1	0	1	1	0	
Deletion Peak  8	9p21.3  	chr9:21860002-22450000(probes 138076:138137)    	chr9:21950001-21990000(probes 138086:138089)      	chr9:20310001-26640000(probes 137924:138521)      	1.1522e-07	 1.1522e-07		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	1	0	1	0	0	1	1	1	0	1	1	1	0	0	0	1	1	1	0	0	0	0	1	0	1	1	0	0	0	1	1	1	1	0	0	0	1	0	0	1	1	1	1	0	1	1	0	1	0	1	0	
Deletion Peak  9	10q25.1 	chr10:45140002-133797422(probes 150347:158380)	chr10:107850002-108129999(probes 156010:156015)	chr10:106920001-110010000(probes 155913:156197)	0.063706	   0.062266		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	1	0	1	1	1	0	1	0	0	0	1	0	0	0	0	1	1	0	0	1	0	0	1	0	0	0	0	1	0	0	1	0	1	1	
Deletion Peak 10	13q11   	chr13:1-18870000(probes 182468:184365)                	chr13:18190001-18240000(probes 184323:184331)    	chr13:18060001-18430000(probes 184308:184362)    	1.9342e-05	 1.9342e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	0	0	0	0	0	0	0	1	0	1	1	1	0	0	1	0	0	1	0	1	1	1	1	1	1	1	1	1	0	0	1	1	1	1	0	0	0	0	1	1	0	0	0	0	1	0	0	1	1	1	1	
Deletion Peak 11	16q23.1 	chr16:59740002-90338345(probes 215890:218494)  	chr16:78080001-79249999(probes 217625:217722)    	chr16:78540002-78579999(probes 217674:217675)    	0.11877	     0.1116		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	1	0	1	0	0	0	1	1	0	1	0	0	1	0	0	0	1	1	0	1	1	0	0	0	0	0	1	0	0	1	1	0	1	1	0	0	0	
Deletion Peak 12	17p13.1 	chr17:1-64159999(probes 218495:224107)                	chr17:7380001-7700000(probes 219087:219116)        	chr17:110001-22799999(probes 218509:220251)        	2.6274e-08	 2.6274e-08		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	0	1	0	1	0	1	1	1	1	0	1	1	1	0	0	1	1	0	0	1	1	1	1	1	0	1	1	1	1	1	0	1	0	1	1	1	0	0	1	1	1	1	1	0	1	1	1	1	1	0	1	0	
Deletion Peak 13	18q21.1 	chr18:1-80373285(probes 225838:232526)                	chr18:46460001-46770000(probes 229647:229674)    	chr18:46520001-46540000(probes 229653:229654)    	0.25035	    0.23194		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	0	0	0	0	1	1	0	0	0	1	1	1	0	0	1	1	0	1	1	1	1	1	1	0	1	0	0	1	1	1	1	0	1	1	1	0	0	0	1	1	1	0	0	0	0	1	1	0	1	1	0	
Deletion Peak 14	19q13.33	chr19:1-58617616(probes 232527:237537)                	chr19:50090001-50130000(probes 236886:236890)    	chr19:50090001-50160000(probes 236886:236893)    	0.20843	      0.221		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	0	0	1	0	0	0	0	1	1	0	1	0	0	0	1	1	0	0	1	0	1	0	1	0	1	1	0	0	0	0	0	1	1	1	1	1	0	1	0	1	0	1	0	0	0	0	1	0	0	1	0	0	
Deletion Peak 15	21p11.2 	chr21:7820002-8989999(probes 244130:244288)      	chr21:8380001-8450000(probes 244205:244213)        	chr21:7870001-10049999(probes 244138:244430)      	3.8195e-12	 4.3586e-10		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	1	1	0	0	1	1	1	0	1	1	1	0	0	0	1	1	0	0	0	1	1	0	1	0	1	0	0	1	1	0	1	1	1	1	1	0	0	1	1	0	0	0	1	1	0	0	1	0	1	1	
Deletion Peak 16	21p11.2 	chr21:7820002-14109999(probes 244130:244482)    	chr21:9060001-9140000(probes 244300:244311)        	chr21:7870001-10049999(probes 244138:244430)      	5.5396e-06	    0.20069		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	1	0	0	0	1	0	1	0	1	1	1	0	0	0	1	1	0	0	0	1	1	1	0	1	0	1	1	0	1	0	1	1	1	1	1	0	0	1	1	0	0	0	1	1	0	0	1	0	1	1	
Deletion Peak 17	22p11.2 	chr22:10960002-16940000(probes 248569:249084)  	chr22:11890001-11960000(probes 248692:248700)    	chr22:11640001-12199999(probes 248660:248738)    	8.3669e-06	 8.0894e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	1	0	0	0	0	0	0	1	0	0	1	0	0	0	0	0	0	0	0	0	1	0	1	0	1	1	0	0	0	1	0	0	0	1	0	0	0	0	1	1	1	0	0	1	1	0	0	1	1	0	1	
Deletion Peak 18	22q13.32	chr22:43850001-50818468(probes 251133:251624)  	chr22:48520002-50818467(probes 251582:251623)    	chr22:43890001-50818468(probes 251137:251624)    	0.00017662	 0.00017662		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	0	0	0	0	1	0	0	1	0	0	1	0	0	0	1	0	1	0	0	1	1	1	0	0	1	1	1	0	1	1	0	1	1	1	1	0	0	0	1	0	1	0	0	0	1	0	1	1	0	1	0	
Deletion Peak 19	Xp22.33 	chrX:1-150909999(probes 251625:263526)                	chrX:250001-3249999(probes 251659:251660)            	chrX:1-3269999(probes 251625:251662)                      	0.0015753	  0.0015753		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	1	0	0	1	0	1	0	0	1	0	0	1	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 20	Xq28    	chrX:154570002-156019999(probes 263793:263809)	chrX:154570002-155960000(probes 263793:263799)  	chrX:155660002-155959999(probes 263797:263798)  	0.081847	   0.077841		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	1	0	1	0	0	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	
Deletion Peak 21	Yq11.223	chrY:14840001-24190000(probes 265419:266416)    	chrY:23200001-23309999(probes 266304:266317)      	chrY:11870001-24360000(probes 265110:266436)      	5.0234e-06	 5.0234e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	0	0	1	0	0	0	0	1	0	0	0	1	1	1	1	0	0	0	0	1	1	1	1	1	0	0	0	1	1	0	1	0	0	1	1	1	1	1	1	1	1	0	0	1	1	0	1	1	1	1	1	
Amplification Peak  1 - CN values	1p34.2 	chr1:40250001-40470000(probes 3488:3508)        	chr1:40260001-40350000(probes 3489:3497)        	chr1:39810001-42100000(probes 3442:3671)        	0.026844	   0.026844		Actual Copy Change Given	-0.08849	0.035422	0.00072251	-0.20532	0.047564	0	0.033964	-0.0085273	0.14389	-0.052323	-0.1096	0.041876	0.0037581	0.1498	0.70833	0.094484	-0.013285	0.0093645	0.11052	0.22706	-0.18429	0.0060439	-0.015515	0.45996	-0.065375	0.14449	0.040007	0.24593	-0.096902	0.33673	0.021647	0.035478	0	-0.5346	0.0091187	0.041751	0.1857	-0.030072	0.088354	2.74	0.040042	-0.001295	3.6569	-0.11535	-0.14781	-0.032979	-0.067916	2.0563	0.0211	0.24623	-0.025124	-0.15304	-0.037568	-0.062571	0.00078895	
Amplification Peak  2 - CN values	1q21.3 	chr1:119990001-156250000(probes 11247:11871)  	chr1:155000001-155010000(probes 11743:11744)  	chr1:119990002-164329999(probes 11248:12671)  	0.0068127	  0.0068127		Actual Copy Change Given	0.12517	0.034275	1.7747	0.59522	0.19054	0.36394	0.2589	-0.0031046	0.32906	0.86463	0.15839	0.85811	1.2908	0.011806	0.25359	0.10201	0.033768	0.55243	1.118	0.17157	0.28285	0.39828	0.03293	0.75062	1.4089	1.4323	0.34494	1.2599	-0.074722	1.3269	0.80898	0.2116	0.76927	0.43921	0.25374	0.37283	0.15279	0.82922	1.0219	0.91789	0.24545	0.34525	0.77394	0.31923	0.53067	0.23868	-0.071106	0.16663	1.125	0.66785	0.73647	0.61611	-0.016746	0.26953	0.004679	
Amplification Peak  3 - CN values	5p15.33	chr5:1-1880000(probes 77564:77598)                      	chr5:1290001-1310000(probes 77581:77583)          	chr5:1-8050000(probes 77564:78205)                      	0.007977	   0.007977		Actual Copy Change Given	1.0241	0.46149	1.7744	0.52569	0.14884	0.004294	2.061	0	0.12755	1.1985	0.031811	0.033413	0.040652	0.2206	0.010336	0.57326	0.0041078	0.0077626	0.84405	1.7283	-0.013709	-0.0013804	0.26244	1.8266	0.59905	0.98025	0.68307	0.10652	0.41992	0.037423	0.79781	0.71555	0.56451	0.43409	2.1852	2.7273	0.083403	0.94551	0.803	0.11302	0.23061	0.0060036	0.051459	0.25366	-0.0057955	1.4049	0.034599	0.42688	-0.035338	0.37827	0.37659	0.1387	0.66971	0.56494	1.9144	
Amplification Peak  4 - CN values	5q35.3 	chr5:169550001-181538259(probes 92926:93983)  	chr5:180830001-180840000(probes 93947:93948)  	chr5:179500001-181380000(probes 93824:93962)  	0.043692	   0.043692		Actual Copy Change Given	-0.064165	-0.12153	0.66876	-0.21316	-0.11472	0.0058991	-0.10187	-0.0085758	-0.13768	0.64789	-0.029778	0	0.047887	-0.24373	0.5605	0.39466	-0.024362	0.010341	0.0027351	-0.016419	-0.031426	0.0019889	0.0025285	-0.34672	-0.17621	0.015781	-0.085724	0.83795	-0.33185	-0.0093101	0.84059	0.0041196	0.096801	0.39123	-0.27698	-0.34926	0.033698	0.31437	0.20044	-0.07102	-0.14183	0.0089335	-0.13838	0.075724	0.017605	0.0534	0.062666	-0.23467	0.28399	3.2327	0.75113	0.89919	0	-0.099233	-0.00043647	
Amplification Peak  5 - CN values	7p21.2 	chr7:15470001-16640000(probes 110836:110950)    	chr7:15890001-15960000(probes 110880:110885)    	chr7:15530001-16400000(probes 110841:110924)    	0.093069	   0.093069		Actual Copy Change Given	0.55359	0.39732	0.76296	0.10142	0.56612	0.016787	1.0295	0.024078	0.13096	0.054042	-0.02838	0.036975	-0.0020551	0.0066461	0.2077	0.068075	0.017715	0.0047643	0.27285	0.4122	0.18757	0.20079	0.00051095	3.6569	0.18929	0.41157	0.059949	0.86321	0.085097	-0.58837	1.2499	0.78671	0.95849	1.4485	0.0046159	0.36597	0.87366	0.47521	0.066581	0.76155	0.24705	0.0058565	0.28679	0.085373	0.16286	0.083423	0.080228	0.34696	1.5805	0.29929	0.70347	0.16656	0.12399	0.55188	1.9618	
Amplification Peak  6 - CN values	8p12   	chr8:35270001-35330000(probes 125884:125890)    	chr8:35280001-35320000(probes 125885:125889)    	chr8:35280001-35349999(probes 125885:125892)    	0.13044	    0.13044		Actual Copy Change Given	-0.1685	0.061652	0.41876	-0.20088	-0.17828	-0.00044095	0.0041928	-0.020085	-0.069809	0.011965	-0.0033958	0.016287	-0.0048453	-0.098923	-0.3545	-0.031569	-0.0024378	0.010703	-0.52829	-0.040621	-0.28792	0.0032861	-0.015259	-0.5511	-0.39726	-0.015322	0.036174	0.040882	-0.29212	3.0725	0.0021679	-0.36703	2.272	0.42872	-0.28354	-0.06147	-0.37899	0.81848	-0.30131	0.28554	0	0.023389	-0.19647	0.030613	-0.11354	3.1885	0.081144	-0.18909	-0.017416	-0.11306	-0.40379	0.14613	-0.11117	-0.38622	0.0057264	
Amplification Peak  7 - CN values	8q24.21	chr8:126330001-128980000(probes 134719:135001)	chr8:128120001-128190000(probes 134912:134919)	chr8:90670001-145138636(probes 131118:136403)  	6.7019e-05	 7.7449e-05		Actual Copy Change Given	0.17463	0.22467	0.41971	-0.013626	0.54657	0.05564	0	0.021683	0.08922	0.014344	0.014265	0.033119	1.0714	0.0020517	1.2404	0.002415	-0.0011738	0.0149	0.86493	0.047985	1.7272	0.011985	-0.019557	1.159	0.013251	0.99322	0.054854	-0.047405	1.5065	0.69093	-0.0047808	0.37894	0.68267	0.46847	0.42955	0.53902	0.11489	0.792	0.79285	0.014202	0.051899	0.017416	0.70638	0.1414	0.073812	3.6569	0.087675	0.17535	0.27888	0.27068	0.61933	0.90781	0.69972	2.2533	0.97508	
Amplification Peak  8 - CN values	8q24.3 	chr8:144170002-145138636(probes 136396:136403)	chr8:144180002-145138636(probes 136397:136403)	chr8:90670001-145138636(probes 131118:136403)  	0.0014694	   0.098171		Actual Copy Change Given	0.17463	0.22467	0.57274	0.26147	0.48737	0.20231	0.35491	0.021683	0.20154	0.014344	0.014265	0.033119	1.0714	0.0020517	0.69557	0.002415	-0.0011738	0.0149	0.77793	0.047985	0.25253	0.011985	-0.019557	1.5307	0.013251	0.87269	0.074145	-0.053935	-0.01146	0.69093	-0.0047808	0.37894	0.93348	0.40417	0.83252	0.98789	0.31331	1.2254	0.54881	-0.088438	0.051899	0.017416	1.1031	0.1414	0.073812	0.2135	0.3246	0.17535	0.37647	0.48799	0.88512	0.28532	0.21485	1.891	1.3413	
Amplification Peak  9 - CN values	11q13.3	chr11:68840001-70000000(probes 164176:164294)  	chr11:69070001-69620000(probes 164201:164252)  	chr11:68110001-71090000(probes 164093:164411)  	0.0073451	  0.0073451		Actual Copy Change Given	0.18985	-0.093408	1.0548	0.055175	0.048325	-0.011736	0.42278	-0.033309	0.062881	-0.11311	0.0085258	-0.021092	0	0.2078	-0.074927	-0.016667	0.0067138	-0.011722	0.13082	0.27454	0.4176	-0.19505	0.0043868	0.23675	0	0.42129	0.69011	-0.10014	0.1244	3.6569	0.0044238	0.032933	0.46236	0.43567	0.28355	-0.30977	0.17725	0.24078	0.11711	-0.050835	0.046161	-0.0045473	0.71377	-0.052349	0.011589	0.059352	1.2258	0.13605	0.051769	-0.0036344	0.45088	0.15639	1.9315	0.84216	0.006039	
Amplification Peak 10 - CN values	12q15  	chr12:68790001-70370000(probes 176481:176648)  	chr12:69860001-70070000(probes 176595:176616)  	chr12:62600001-72260000(probes 175859:176829)  	0.0023524	  0.0023524		Actual Copy Change Given	0	2.1097	1.4605	0.18911	-0.1158	0.00075843	-0.042138	0.0015809	-0.13797	0.021617	0.014578	0.065857	0.0092772	0.11916	-0.074705	0.10029	0.012957	1.5185	-0.0011812	3.6569	0.049496	0.0049691	-0.00067573	-0.15287	-0.30036	0.010468	-0.10769	-0.098722	0.055398	0.015438	-0.0044514	0.0049447	0.15535	0.76618	0.02164	-0.011097	0.13386	-0.093528	-0.29689	-0.053221	-0.036697	0	0.44753	0	0.53521	3.6569	-0.055985	0.014412	-0.011798	0	0.018011	-0.16449	0.11792	0.33513	-0.00082703	
Amplification Peak 11 - CN values	14q13.3	chr14:35850001-37140000(probes 196463:196613)  	chr14:36350001-36390000(probes 196523:196527)  	chr14:28220001-40180000(probes 195646:196911)  	6.7019e-05	 6.7019e-05		Actual Copy Change Given	0.10298	0.60994	1.1217	3.6569	0.31664	-0.00054123	-0.024933	-0.0051167	0.016734	0	0.059196	0.023031	0.011525	-0.13162	0.032096	-0.013968	-0.0086987	-0.0029134	0.37015	-0.033461	-0.067116	0.0049086	0.0093725	1.8577	0.12923	0.15354	0.70876	0.77663	0.38905	0.56173	-0.00036231	0.0070094	0.38508	-0.029184	0.067556	0.37398	0.67324	0.63779	0.84608	1.7368	0.25484	-0.0030037	2.8302	0.44527	-0.0054751	0.069425	0.019684	0.94593	3.6569	-0.0093174	0.35853	0.35636	0.15997	0.50171	0.0069231	
Amplification Peak 12 - CN values	17q25.1	chr17:37630001-83257441(probes 221659:225837)  	chr17:73830001-75640000(probes 225076:225170)  	chr17:66080001-75910000(probes 224312:225200)  	0.051285	   0.051285		Actual Copy Change Given	0.3523	0.55251	0.53358	0.41579	0.052316	-0.0015804	0.69256	0.010373	0.13558	0.026237	-0.033463	0.13073	0.011116	-0.26203	0.29524	0.12521	0.07336	1.5619	0.38766	0.06046	0.15451	0.015203	0.26669	0.31329	0.17723	0.75232	-0.021918	-0.053944	-0.045386	0.077135	0.43721	0.033008	-0.036352	0.45493	0.32012	-0.29571	-0.091313	0.59285	-0.086712	0.16692	0.049921	0.33842	0.015555	0.13371	0.78446	0.31764	0.40752	0.15603	0.74518	0.37728	0.39886	0.35228	0.088027	0.55951	-0.0059846	
Amplification Peak 13 - CN values	19q12  	chr19:29620001-29880000(probes 234856:234887)  	chr19:29690001-29770000(probes 234864:234871)  	chr19:29630001-29899999(probes 234857:234889)  	0.029937	   0.029937		Actual Copy Change Given	-0.2839	0.59972	-0.022999	0.5165	-0.11848	-0.26899	0.23587	-0.030262	0.11962	-0.03729	-0.11678	-0.7823	0.018269	3.6569	-0.3506	-0.040545	0.014654	-0.53083	0.20682	0.19009	0.18522	-0.10146	-0.0074339	-0.089092	-0.082616	0.1236	-0.076417	3.6569	0.4267	0.034707	-0.0038196	0.16388	0.22769	-0.11952	-0.063889	1.0939	0.12895	-0.18833	-0.1327	-0.080843	-0.13936	-0.0058316	-0.20439	-0.11497	0.58593	0.043419	-0.061225	-0.024916	-0.079826	-0.0086668	0.023108	0.03737	-0.13411	-0.36726	0.06374	
Amplification Peak 14 - CN values	Xp22.33	chrX:1-150000(probes 251625:251645)                      	chrX:1-120000(probes 251625:251640)                      	chrX:1-249999(probes 251625:251657)                      	0.079768	   0.079768		Actual Copy Change Given	-0.28338	0.0086969	-1.0332	0.37599	0.16161	2.0276	0.1303	0.5478	-0.069065	-0.69956	0.02088	-0.0013701	0.0061324	0.056635	0.5151	0.07429	-0.11389	-0.022259	-0.53234	0.29474	0.08924	-0.29349	0.0098629	-0.55649	-0.68857	-0.85075	-0.60666	-0.41257	0.070961	-0.31671	-0.20031	-0.19572	0.71172	-0.88544	0.27825	2.7501	0.57211	-0.57918	-0.24398	-0.1113	-0.25958	-0.027928	0.29911	0.2396	-0.34713	-0.1411	0.26894	0.18667	0.032732	0.30006	0.12469	-0.065814	-0.046272	0.69624	0.45873	
Amplification Peak 15 - CN values	Xq25   	chrX:99980002-144090000(probes 259097:262896)  	chrX:126570001-126730000(probes 261509:261521)	chrX:104380001-144100000(probes 259511:262898)	0.010447	    0.13044		Actual Copy Change Given	0.2003	0.086095	2.4193	0.42941	0.018592	-0.006945	-0.0029431	-0.013085	0.33215	-0.31076	0.011768	0.044507	2.3738	0.070682	0.36614	0.345	0.0050536	-0.02376	-0.026745	0.17097	0.078099	-0.23861	0.006269	-0.31754	0.15639	0.024196	0	3.0058	0.68488	-0.01961	0.821	0.65907	-0.243	0.38625	-0.0022221	0.32551	0.14145	-0.024789	-0.33203	0.31534	0.02437	-0.030403	0.42939	0.18803	0.00909	0.12204	0.068226	0.15295	0.29071	0.034615	0.043431	0.13921	-0.0454	0.88397	1.9849	
Amplification Peak 16 - CN values	Xq27.3 	chrX:145300001-156040895(probes 263006:263814)	chrX:145990001-146020000(probes 263080:263083)	chrX:144170001-156040895(probes 262907:263814)	0.0064097	   0.072651		Actual Copy Change Given	0.16677	0.14068	-0.3623	0.4402	0.033765	-0.006945	0.14424	-0.013085	0.33215	-0.31076	0.011768	0.044507	2.9504	0.032437	0.36614	0.345	0.0050536	-0.022653	-0.026745	0.17097	0.078099	-0.23861	0.006269	-0.32775	0.15639	0.011092	0	2.565	0.66811	0.2777	0.73134	1.3377	0.47134	0.34288	-0.0022221	0.26033	0.14065	1.8266	-0.33203	0.15127	0.02437	-0.030403	0.38364	-0.061272	0.00909	0.12204	0.068226	0.095584	0.29071	0.034615	0.82648	0.12246	-0.0454	0.88397	1.946	
Amplification Peak 17 - CN values	Yq12   	chrY:21920002-56790000(probes 266158:269709)    	chrY:26630001-26680000(probes 266691:266697)    	chrY:26310001-26710000(probes 266653:266700)    	0.10551	    0.10551		Actual Copy Change Given	-0.65248	-0.41042	-0.85391	-0.28383	0.01357	2.0726	-0.57824	0.54201	-0.029991	-0.15608	0.15407	-0.50831	0.1369	0.0065252	0.0011135	-0.19614	-0.26057	-0.12919	0.29133	0.54432	0.29547	-0.091415	-0.061512	-0.1844	-0.81834	-0.89532	-0.78171	-0.41985	0.41124	0.084116	-0.032372	1.0072	-0.31377	0.2566	-0.62072	3.1076	-0.071108	-1.1682	-0.17702	-0.3663	-0.32211	-0.12047	-1.0159	-0.3753	-0.66854	-0.05195	0.056727	-0.51139	-0.34117	0.016823	-0.010351	-0.26099	-0.38313	-0.10036	-0.6587	
Deletion Peak  1 - CN values	1p13.3  	chr1:55210001-155800000(probes 4973:11823)     	chr1:108800001-109250000(probes 10148:10185)    	chr1:99970001-117589999(probes 9362:11007)       	0.014105	   0.014105		Actual Copy Change Given	0.0068011	0.035422	-0.36019	-0.20532	0.047564	0	-0.16165	-0.0085273	-0.14635	-0.054365	-0.1096	-0.7865	0.0037581	0.1498	-0.35948	0.11694	-0.013285	0.0093645	0.11052	0	-0.18429	0.0060439	-0.015515	0.68401	-0.065375	0.12845	0.040007	0.25494	0.10619	-0.60334	-0.012646	-0.0014742	-0.41827	0.46664	0.17241	-0.0030483	0.015676	-0.01754	0.088354	-0.054602	0.048192	-0.001295	-0.54665	-0.0060178	-0.16865	-0.032979	-0.069371	-0.15988	-0.036537	-0.23632	-0.025124	-0.1799	-0.037568	-0.28029	-0.0048489	
Deletion Peak  2 - CN values	3p24.1  	chr3:1-89419999(probes 42198:50262)                    	chr3:28570001-28799999(probes 44436:44457)        	chr3:1-30380000(probes 42198:44605)                      	0.0092832	  0.0094348		Actual Copy Change Given	0.0043153	-0.17396	-0.36491	-0.20324	-0.11973	0.0004632	0.0097831	0.033371	-0.14088	-0.056846	-0.13669	0.011024	-0.0039267	-0.14706	-0.30143	-0.0063413	0.0052443	-0.0078023	-0.010995	-0.28189	-0.23795	0.0026183	-0.048163	-0.25971	-0.29493	0.060129	-0.72892	-0.26917	-0.15124	-0.59121	0.0010927	0.0059731	-0.25468	-0.52976	-0.12673	-0.36209	0.14536	-0.17396	-0.27163	-0.28961	-0.05425	0.0086807	-0.27911	0.036369	0.0099741	-0.060929	-0.0034971	-0.19133	-0.34791	-0.21868	0.0209	-0.0089432	-0.082295	-0.42686	0.005315	
Deletion Peak  3 - CN values	4q35.2  	chr4:187670001-190179999(probes 77531:77556)  	chr4:187840002-190120000(probes 77549:77550)    	chr4:187850002-190130000(probes 77550:77551)    	0.00097854	 0.00097854		Actual Copy Change Given	-0.47109	-0.0075154	-0.33775	-0.11741	0.022109	0.20971	0.069115	0.014763	0.15677	-0.21505	-0.21418	-0.49865	-0.018561	-0.16293	0.12669	-0.18813	0.19311	-0.0016838	-0.12302	-0.13308	0	-0.0038317	-0.036544	0.41055	-0.16159	-0.15122	0.0093757	-0.081248	0.06578	-0.27434	-0.012956	0.01096	-0.23379	-0.54913	0.2212	-0.13895	0.18469	-0.25184	-0.13569	-0.26708	-0.1448	-0.0036231	-0.36152	-0.11828	-0.018933	-0.042734	-0.065917	-0.046276	0.17897	0.77425	-0.0015417	0.13428	0.10433	-0.32358	-0.22247	
Deletion Peak  4 - CN values	5q11.2  	chr5:51390001-65630000(probes 81674:83031)      	chr5:58950002-59050000(probes 82432:82443)        	chr5:58990001-59430000(probes 82437:82477)        	0.028309	   0.027595		Actual Copy Change Given	-0.056537	-0.13459	-0.36126	-0.0012679	-0.1123	0.0058991	-0.079023	-0.0085758	-0.13953	0.043723	-0.029778	0	0.047887	-0.019815	0	-0.12362	-0.024362	0.010341	0.0027351	-0.016419	-0.031426	0.0019889	0.0025285	-0.3442	0.0012338	0.27061	0.017162	-0.10656	-0.36876	0.011206	0	-0.0033357	0.11157	-0.52818	0.04333	-0.7016	-0.12861	-0.46082	-0.29881	-0.055334	0.23673	0.0089335	-0.095932	-0.12513	0.012078	0.0534	0.062666	-0.19332	-0.30937	0.017366	0.47728	-0.18221	0	-0.20087	0.0050668	
Deletion Peak  5 - CN values	6q16.3  	chr6:63630002-132420000(probes 99558:106150)   	chr6:104920002-104959999(probes 103446:103449)  	chr6:64460001-132280000(probes 99645:106139)     	0.00049839	 0.00047709		Actual Copy Change Given	-0.28102	-0.1595	-0.36733	0.10591	-0.017338	-0.0025946	0.010232	0.010898	0	-0.076487	0.0049493	-0.010248	-0.0091686	0	-0.3518	0.089207	-0.024227	0	-0.13597	0.0046378	-0.30993	0	0.0069553	-0.12218	-0.30404	-0.39692	-0.71241	0.20625	-0.35443	-0.4896	-0.012665	-0.40653	-0.24345	-0.51737	-0.32893	0	-0.27199	-0.39356	-0.31997	0.15485	-0.050413	0.0075668	0.0312	-0.15997	-0.35984	-0.081523	0.18988	-0.344	0.32154	-0.0014188	-0.051675	-0.19103	0.11701	-0.77848	-0.0059779	
Deletion Peak  6 - CN values	8p23.1  	chr8:1-38539999(probes 123155:126202)                  	chr8:6790002-6850000(probes 123486:123489)          	chr8:80002-30989999(probes 123165:125463)           	0.00016443	    0.12325		Actual Copy Change Given	-0.26919	-0.17151	-0.33172	0.17954	-0.19612	-0.0056194	-0.053012	-0.020085	-0.069809	-0.00010534	-0.0033958	0.016287	-0.0048453	-0.12044	-0.3545	-0.031569	-0.0024378	0.010703	-0.52829	-0.54947	-0.26301	0.0032861	-0.29279	-0.57098	-0.38461	-0.054545	0.036174	-0.0024591	0.0059286	-0.59081	-0.053412	-0.36703	-0.042435	0.33234	-0.295	-0.41379	-0.39362	-0.64797	-0.32375	0.28554	-0.031612	0.012024	-0.21034	-0.21347	-0.11354	-0.22473	0.081144	-0.20345	-0.017416	0.21074	-0.41895	0.14613	-0.22738	-0.80706	0.0099615	
Deletion Peak  7 - CN values	8p21.2  	chr8:1-34870000(probes 123155:125854)                  	chr8:25340001-25519999(probes 124900:124917)      	chr8:80002-30989999(probes 123165:125463)           	0.00041377	   0.015266		Actual Copy Change Given	-0.20839	-0.16039	-0.31835	-0.20088	-0.17828	-0.00044095	0.0041928	-0.020085	-0.069809	0.011965	-0.0033958	0.016287	-0.0048453	-0.098923	-0.3545	-0.031569	-0.0024378	0.010703	-0.52829	-0.51694	-0.28705	0.0032861	-0.015259	-0.5511	-0.39726	-0.015322	0.036174	0.040882	-0.59483	-0.59065	0.0021679	-0.36703	-0.037455	0.42872	-0.25499	-0.37092	-0.81588	-0.63554	-0.30131	0.28554	0	0.023389	-0.19647	-0.21347	-0.11354	-0.21493	0.081144	-0.18909	-0.017416	-0.11306	-0.40379	0.14613	-0.11117	-0.38622	0.0057264	
Deletion Peak  8 - CN values	9p21.3  	chr9:21860002-22450000(probes 138076:138137)    	chr9:21950001-21990000(probes 138086:138089)      	chr9:20310001-26640000(probes 137924:138521)      	1.1522e-07	 1.1522e-07		Actual Copy Change Given	-0.090352	-0.1519	-0.37124	-0.19795	-0.12441	0.0012303	-0.66243	-0.028412	-0.060447	-0.39525	-0.14101	-1.2929	-0.0059898	-0.14789	-0.26876	-0.19445	-0.029125	-0.052344	-0.011632	-0.2953	-0.37781	-0.201	-0.043773	-0.085924	0.16476	-0.028033	-1.2929	0.70345	-0.1193	-0.30023	-0.017261	0.13277	-0.067483	-0.53541	-0.30093	-0.36878	-0.93083	0.27314	-0.021372	0.71003	-0.1435	-0.0060512	-0.049539	-0.18741	-0.16849	-0.18148	-0.21537	0.10255	-0.35154	-0.35348	-0.00041809	-0.52324	-0.053891	-0.71817	-0.036519	
Deletion Peak  9 - CN values	10q25.1 	chr10:45140002-133797422(probes 150347:158380)	chr10:107850002-108129999(probes 156010:156015)	chr10:106920001-110010000(probes 155913:156197)	0.063706	   0.062266		Actual Copy Change Given	-0.11546	0.02226	-0.30343	-0.024113	0.0086236	-0.0081212	-0.047247	-0.00042359	-0.12312	-0.34889	0	-0.78761	-0.0027368	0.062976	0.12863	-0.018669	-0.010815	0.0074886	0.21323	0.23538	0.052005	-0.1948	0.0017553	-0.19119	-0.30148	-0.21845	-0.0029606	-0.35072	-0.020846	0.0027073	0.0012602	-0.38484	-0.026966	0.95603	0.0087289	0.31995	-0.18691	-0.16634	-0.08913	-0.061658	-0.14318	-0.0067254	0.32524	-0.12305	-0.0077464	-0.098774	-0.066494	0.12107	-0.98489	-0.034794	-0.0039534	-0.17551	0.047841	-0.36266	-0.23991	
Deletion Peak 10 - CN values	13q11   	chr13:1-18870000(probes 182468:184365)                	chr13:18190001-18240000(probes 184323:184331)    	chr13:18060001-18430000(probes 184308:184362)    	1.9342e-05	 1.9342e-05		Actual Copy Change Given	-0.28163	-0.023632	-0.41749	-0.31433	0.026643	0.0053964	-0.090855	0.016018	0.10244	-0.064694	0.018435	-0.78895	-0.06323	-0.39002	-0.35761	-0.1158	-0.043723	-0.0025292	-0.25742	0.015098	-0.03407	-0.18313	0.44044	-0.63978	-0.3094	-0.12091	-0.40829	-0.62038	-0.46283	-0.32663	-0.38386	-0.18979	0.083686	0.048624	-0.30678	-0.35175	-0.1677	-0.34928	-0.0076952	0.50246	-0.042678	-0.0093208	-0.16605	-0.23125	0.1382	-0.009023	0.073743	-0.014152	-0.63931	-0.036342	0.020451	-0.29876	-0.16458	-0.40094	-0.42833	
Deletion Peak 11 - CN values	16q23.1 	chr16:59740002-90338345(probes 215890:218494)  	chr16:78080001-79249999(probes 217625:217722)    	chr16:78540002-78579999(probes 217674:217675)    	0.11877	     0.1116		Actual Copy Change Given	0.043366	-0.034735	-0.34085	0.18504	0.042377	-0.00029778	-0.2372	-0.0051837	0.026253	-0.27846	-0.0052106	0.027476	0.25342	-0.081039	0.10157	0.37191	-0.019265	0.0083961	-0.27093	0.36644	-0.12672	0.0095205	-0.051231	0.18398	-0.30013	-0.38233	0.014553	-0.14691	0.33244	0.30871	-0.15482	-0.0090715	0.3189	0.86781	-0.29397	-0.34438	0.14235	-0.49956	-0.29814	0.18613	0.06958	-0.0032786	0.11939	-0.066036	-0.15368	0.050642	0.090446	-0.13876	-0.29428	0.027322	-0.38826	-0.15972	0.028476	0.091564	0.017149	
Deletion Peak 12 - CN values	17p13.1 	chr17:1-64159999(probes 218495:224107)                	chr17:7380001-7700000(probes 219087:219116)        	chr17:110001-22799999(probes 218509:220251)        	2.6274e-08	 2.6274e-08		Actual Copy Change Given	-0.30142	-0.10483	0.34355	0.092482	-0.11892	-0.00673	-0.21459	-0.030838	-0.16121	-0.29429	-0.14675	-0.80305	0.011003	-0.13487	-0.34025	-0.12251	-0.01418	0.015864	-0.27143	-0.15108	0.12431	0.018149	-0.26125	-0.11115	-0.31067	-0.42447	-0.7852	-0.080069	-0.31871	-0.56327	-0.42679	-0.3679	-0.62775	0.4047	-0.13813	0.42095	-0.36303	-0.67756	-0.30425	-0.047692	0.047314	-0.33438	-0.16329	-0.11973	-0.15858	-0.18925	-0.060804	-0.17026	-0.58618	-0.33592	-0.39594	-0.15827	0.025959	-0.60095	-0.0075816	
Deletion Peak 13 - CN values	18q21.1 	chr18:1-80373285(probes 225838:232526)                	chr18:46460001-46770000(probes 229647:229674)    	chr18:46520001-46540000(probes 229653:229654)    	0.25035	    0.23194		Actual Copy Change Given	0.1043	-0.28665	-0.36909	-0.1523	0.050225	0.0066912	-0.071091	-0.0074771	-0.21176	-0.32285	0.012164	0.0067178	-0.0064929	-0.27578	-0.29455	-0.12929	-0.015692	-0.0015411	-0.23945	-0.15111	-0.0036776	-0.20058	-0.27005	-0.55083	-0.23862	-0.31853	-0.62683	0.087374	-0.37027	0.31095	-0.039091	-0.39863	-0.41561	-0.53648	-0.16059	0.2111	-0.45451	-0.27311	-0.29234	-0.058109	0.03643	-0.010933	-0.13238	-0.20379	-0.17471	-0.026969	-0.078131	0.012608	0.31423	-0.4375	-0.39905	-0.020673	-0.13654	-0.51146	-0.042972	
Deletion Peak 14 - CN values	19q13.33	chr19:1-58617616(probes 232527:237537)                	chr19:50090001-50130000(probes 236886:236890)    	chr19:50090001-50160000(probes 236886:236893)    	0.20843	      0.221		Actual Copy Change Given	-0.27366	-0.05203	0.35881	0.5165	0.048881	-0.32222	0.19063	-0.030262	-0.082136	-0.03729	-0.14282	-0.79593	0.018269	-0.2679	-0.062886	-0.045089	0.014654	-0.5278	-0.27595	-0.036105	0.18522	-0.10146	-0.0074339	-0.42085	-0.081501	-0.38237	-0.076417	-0.26288	-0.33173	0.65932	0.023815	0.16388	0.26177	-0.040981	-0.16801	-0.60349	-0.34596	-0.23982	-0.1327	0.18519	-0.14057	0.002464	-0.15878	0.0078882	-0.14156	-0.0020236	-0.061225	0.17375	0.0618	-0.44906	0.023108	0.073232	-0.10983	-0.00095086	-0.045999	
Deletion Peak 15 - CN values	21p11.2 	chr21:7820002-8989999(probes 244130:244288)      	chr21:8380001-8450000(probes 244205:244213)        	chr21:7870001-10049999(probes 244138:244430)      	3.8195e-12	 4.3586e-10		Actual Copy Change Given	-0.72317	-0.37457	-0.72833	-0.5045	-0.12457	-0.11387	-0.31173	-0.038274	-0.096104	-0.11233	-0.28746	-0.9264	0.00017841	-0.15806	-0.14266	-0.15181	-0.019731	-0.010718	0.17318	-0.32573	-0.11979	-0.098107	-0.016987	0.0034118	-0.33812	-0.79133	-0.066319	-0.20839	0.10941	-0.53142	-0.058793	-0.060194	-0.29766	-0.6511	-0.012854	-0.36588	-0.10706	-0.85278	-0.12795	-0.41829	-0.070526	-0.027548	-0.89207	-0.31536	-0.066834	0.0058554	-0.018738	-0.32025	-0.35991	-0.039078	-0.029404	-0.168	0.085643	-0.48411	-0.58334	
Deletion Peak 16 - CN values	21p11.2 	chr21:7820002-14109999(probes 244130:244482)    	chr21:9060001-9140000(probes 244300:244311)        	chr21:7870001-10049999(probes 244138:244430)      	5.5396e-06	    0.20069		Actual Copy Change Given	-0.21105	-0.33843	-0.50425	-0.57044	-0.12457	-0.13831	-0.014168	-0.038274	-0.096104	-0.11233	-0.052122	-0.72007	0.00017841	-0.15806	-0.17135	-0.1814	-0.019731	-0.010718	0.82728	-0.19904	-0.1066	-0.098107	-0.016987	-0.031872	-0.19628	-0.22881	-0.58891	-0.068303	-0.34396	-0.028438	-0.17704	-0.13575	0.068912	-0.18643	-0.012854	-0.3141	-0.10706	-0.3591	-0.12795	-0.37686	-0.070526	-0.027548	-0.70047	-0.39246	0.036877	0.0058554	-0.018738	-0.32025	-0.4411	-0.039078	0.030609	-0.168	-0.095766	-0.2661	-0.78625	
Deletion Peak 17 - CN values	22p11.2 	chr22:10960002-16940000(probes 248569:249084)  	chr22:11890001-11960000(probes 248692:248700)    	chr22:11640001-12199999(probes 248660:248738)    	8.3669e-06	 8.0894e-06		Actual Copy Change Given	-0.14207	-0.014246	-0.38196	-0.36326	-0.24469	-0.066866	-0.087589	-0.0226	-0.080574	-0.044076	-0.081093	-0.82951	-0.011759	-0.059855	-0.11855	-0.075034	-0.054601	-0.021878	0.029437	-0.078766	-0.012219	-0.034315	-0.0093307	0.51538	-0.4267	0.07586	-0.6756	0.0097102	-0.16202	-0.30218	-0.03708	-0.082828	-0.067137	-0.57012	0.034002	0.15157	0.045543	-0.34736	-0.056168	0.073573	-0.017156	-0.020978	-0.27009	-0.30274	-0.10766	-0.044439	-0.0084519	-0.45665	-0.67707	-0.013523	0.36697	-0.21576	-0.14553	0.26662	-0.80667	
Deletion Peak 18 - CN values	22q13.32	chr22:43850001-50818468(probes 251133:251624)  	chr22:48520002-50818467(probes 251582:251623)    	chr22:43890001-50818468(probes 251137:251624)    	0.00017662	 0.00017662		Actual Copy Change Given	-0.33782	-0.12687	-0.36812	-0.23	-0.022527	-0.0064464	0.096407	-0.038541	-0.14173	-0.024058	-0.079124	-0.80473	-0.00088395	0.078903	-0.33148	-0.038431	-0.014929	0.012401	-0.55024	-0.039557	-0.2328	0.010725	-0.022598	-0.65592	-0.30873	-0.39433	-0.081029	0.038945	-0.35552	-0.54237	-0.40426	0.030034	-0.23994	-0.56054	0.16039	-0.31591	-0.32787	-0.92292	-0.11414	-0.052936	0.045268	-0.0007193	-0.26273	0.042626	-0.15157	-0.071309	-0.0092493	-0.045747	-0.29864	-0.050524	-0.40037	-0.14445	0.1431	-0.48526	0.87496	
Deletion Peak 19 - CN values	Xp22.33 	chrX:1-150909999(probes 251625:263526)                	chrX:250001-3249999(probes 251659:251660)            	chrX:1-3269999(probes 251625:251662)                      	0.0015753	  0.0015753		Actual Copy Change Given	0.17308	0.13347	-0.17654	0.49937	-0.054662	0.0037957	0.17949	-0.035563	-0.069065	-0.32207	0.02088	-0.0013701	0.0061324	0.056635	0.35081	0.07429	0.013191	-0.022259	-0.14903	0.04657	0.40181	-0.23174	0.0098629	-0.55649	0.13434	-0.0067622	-0.10726	0.15066	0.070961	-0.31671	0.77377	-0.37142	0.49093	0.34018	0	0.30568	0.1473	-0.087026	-0.50988	1.0638	0.029263	-0.027928	0.31318	0.3826	0.015625	0.1296	0.050296	0.15131	0.33875	0.035406	-0.014098	0.16252	-0.046272	0.52633	0.010678	
Deletion Peak 20 - CN values	Xq28    	chrX:154570002-156019999(probes 263793:263809)	chrX:154570002-155960000(probes 263793:263799)  	chrX:155660002-155959999(probes 263797:263798)  	0.081847	   0.077841		Actual Copy Change Given	0.10426	0.18833	-0.3623	0.34412	0.033765	-0.006945	0.20351	-0.013085	0.33215	-0.31076	0.011768	0.044507	1.0025	0.54202	0.31721	0.43275	0.0050536	-0.022653	-0.01141	0.17097	0.078099	-0.23861	0.006269	-0.32775	0.15639	0.011092	0	2.0533	1.0046	0.053874	0.82636	1.4033	0.83519	0.34366	-0.23072	0.3142	0.14065	1.7804	-0.013909	0.17239	0.02437	-0.038475	0.44588	0.0016547	0.00909	0.12204	0.068226	0.17019	0.31321	0.034615	0.82837	0.17917	-0.0454	0.88397	1.946	
Deletion Peak 21 - CN values	Yq11.223	chrY:14840001-24190000(probes 265419:266416)    	chrY:23200001-23309999(probes 266304:266317)      	chrY:11870001-24360000(probes 265110:266436)      	5.0234e-06	 5.0234e-06		Actual Copy Change Given	-0.65248	-0.41042	-1.1096	-0.28383	0.01357	1.4426	-0.57824	0.54201	-0.029991	0.37164	0.28324	-0.12904	0.1369	0.0065252	0.0011135	-0.58021	-0.26057	-0.62789	-0.58821	0.54432	0.29547	-0.091415	-0.061512	-0.51385	-0.81834	-0.89532	-0.71403	-0.90908	-0.053577	0.084116	-0.032372	-0.79043	-0.31377	0.92897	-0.62072	0.36832	0.12299	-1.2124	-0.94913	-0.3663	-0.32211	-0.12047	-1.0159	-0.3753	-0.75916	-0.05195	0.056727	-0.60695	-0.34117	0.016823	-0.13559	-0.46458	-0.96958	-0.10036	-0.97429