Unique Name	Descriptor	Wide Peak Limits	Peak Limits	Region Limits	q values	Residual q values after removing segments shared with higher peaks	Broad or Focal	Amplitude Threshold	11LU013_TP	11LU016_TP	11LU022_TP	11LU035_TP	C3L-00009_TP	C3L-00080_TP	C3L-00093_TP	C3L-00095_TP	C3L-00144_TP	C3L-00279_TP	C3L-00510_TP	C3L-00913_TP	C3L-01682_TP	C3L-01924_TP	C3L-02365_TP	C3N-00167_TP	C3N-00169_TP	C3N-00180_TP	C3N-00199_TP	C3N-00203_TP	C3N-00217_TP	C3N-00294_TP	C3N-00546_TP	C3N-00547_TP	C3N-00549_TP	C3N-00550_TP	C3N-00551_TP	C3N-00552_TP	C3N-00559_TP	C3N-00560_TP	C3N-00572_TP	C3N-00574_TP	C3N-00579_TP	C3N-00580_TP	C3N-00704_TP	C3N-00737_TP	C3N-01024_TP	C3N-01030_TP	C3N-01071_TP	C3N-01074_TP	C3N-01413_TP	C3N-01415_TP	C3N-01489_TP	C3N-01823_TP	C3N-01842_TP	C3N-02000_TP	C3N-02003_TP	C3N-02067_TP	C3N-02087_TP	C3N-02089_TP	C3N-02149_TP	C3N-02379_TP	C3N-02423_TP	C3N-02424_TP	C3N-02529_TP	C3N-02572_TP	C3N-02582_TP	C3N-02586_TP	C3N-02588_TP	
Amplification Peak  1	1q21.3  	chr1:119990001-156860000(probes 11275:11966)  	chr1:151220001-151350000(probes 11404:11417)  	chr1:119990002-157270000(probes 11276:12006)  	0.0071758	  0.0071758		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	2	1	0	2	0	1	0	1	1	0	1	2	1	1	2	1	2	0	2	1	1	1	1	1	1	0	1	1	0	0	1	1	1	2	1	1	1	1	1	1	1	1	1	1	0	1	1	1	1	1	1	0	1	0	1	0	1	
Amplification Peak  2	3q26.2  	chr3:89260001-198295559(probes 50576:60774)    	chr3:169790001-169890000(probes 58353:58363)  	chr3:169790001-169920000(probes 58353:58366)  	0.23631	    0.23631		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	1	1	1	1	0	0	1	1	0	0	0	0	0	0	1	0	0	2	0	0	0	1	1	0	0	0	1	0	0	0	1	1	0	1	1	0	1	0	0	1	1	1	1	0	0	0	0	0	1	1	0	0	1	0	0	0	2	
Amplification Peak  3	4q12    	chr4:54400001-54590000(probes 65625:65646)      	chr4:54410001-54450000(probes 65626:65630)      	chr4:54030001-55430000(probes 65581:65739)      	0.0047651	  0.0047651		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	1	2	0	0	0	0	0	0	0	0	1	0	0	0	0	0	0	0	0	0	0	0	0	0	0	1	0	0	0	2	0	0	1	0	0	1	0	2	2	0	0	0	0	1	0	0	0	1	1	1	0	0	0	0	1	
Amplification Peak  4	5p15.33 	chr5:980001-1880000(probes 78220:78245)            	chr5:1290001-1300000(probes 78228:78229)          	chr5:1-12269999(probes 78210:79252)                    	0.00092508	 0.00092508		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	2	2	1	2	2	1	2	1	0	1	1	1	2	1	1	1	1	1	0	1	1	1	1	0	2	1	1	2	0	0	1	2	1	1	1	1	1	0	1	2	1	1	2	1	0	1	1	1	1	1	1	1	1	1	1	2	1	
Amplification Peak  5	6p21.1  	chr6:1-61529999(probes 94811:100269)                   	chr6:41650001-41660000(probes 98650:98651)      	chr6:41590001-41829999(probes 98643:98669)      	0.16136	    0.16136		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	0	0	1	0	1	1	0	0	0	1	0	1	0	0	1	1	1	0	0	0	1	1	0	0	1	0	0	2	1	1	0	1	0	1	1	1	1	1	1	1	0	1	1	1	1	0	0	1	0	1	1	1	1	0	0	
Amplification Peak  6	7p11.2  	chr7:54710001-55440000(probes 115597:115677)    	chr7:54970001-55130000(probes 115626:115641)    	chr7:52070001-57159999(probes 115321:115821)    	2.1276e-06	 2.1276e-06		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	1	1	1	1	1	0	1	1	0	0	0	1	2	2	1	0	2	1	0	1	1	2	1	2	0	0	2	1	0	2	1	1	0	1	0	0	0	0	1	2	0	1	0	2	0	1	1	1	1	2	1	1	1	1	2	2	1	
Amplification Peak  7	7q11.21 	chr7:56150002-159345973(probes 115758:124323)  	chr7:65780001-65830000(probes 115956:115961)    	chr7:65780001-65850000(probes 115956:115964)    	0.23631	    0.23631		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	1	1	1	0	1	0	1	1	0	1	0	1	1	1	1	0	1	1	0	1	1	0	1	1	1	0	2	1	0	2	1	1	0	1	0	0	0	0	1	1	0	0	0	1	0	1	1	1	1	2	1	1	1	1	1	1	0	
Amplification Peak  8	8q24.21 	chr8:128140001-128209999(probes 136397:136406)	chr8:128160001-128190000(probes 136400:136403)	chr8:79670001-145138636(probes 131315:137906)  	2.4624e-07	 2.4624e-07		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	1	1	1	1	0	1	0	0	0	0	0	1	2	0	0	0	0	2	1	0	1	1	1	0	1	0	1	1	0	2	1	1	1	0	2	1	1	2	1	1	1	0	0	1	0	1	0	2	1	2	2	1	2	0	2	2	1	
Amplification Peak  9	11q13.3 	chr11:68860002-70000000(probes 165962:166082)  	chr11:69330001-69400000(probes 166013:166020)  	chr11:68750001-70370000(probes 165948:166122)  	0.00070732	 0.00070732		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	0	1	0	2	0	0	1	0	0	1	0	1	1	1	0	1	0	1	2	0	0	1	1	1	1	0	0	0	0	1	0	1	1	0	1	0	0	0	0	1	0	1	0	1	2	1	0	1	1	2	1	2	0	0	1	0	1	
Amplification Peak 10	12p11.21	chr12:32300001-32520000(probes 175216:175240)  	chr12:32310001-32320000(probes 175217:175218)  	chr12:32310001-32540000(probes 175217:175242)  	0.034331	   0.034331		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	2	0	1	0	0	0	0	0	2	1	0	0	0	0	0	0	0	1	0	0	0	1	1	0	0	0	1	0	1	0	1	0	0	0	0	0	1	2	0	0	0	2	0	0	0	1	1	1	1	1	0	0	0	0	0	0	0	
Amplification Peak 11	12q14.1 	chr12:58410001-58480000(probes 177249:177255)  	chr12:58420001-58470000(probes 177250:177254)  	chr12:58420001-58499999(probes 177250:177257)  	0.029211	   0.029211		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	0	0	0	1	2	0	0	0	0	0	1	1	0	0	0	0	0	0	0	0	0	0	1	1	0	0	0	2	0	0	2	0	0	0	0	1	0	1	0	0	1	0	0	0	1	0	0	0	1	0	0	0	1	1	0	0	0	0	
Amplification Peak 12	14q13.3 	chr14:36600002-36640000(probes 198572:198576)  	chr14:36610001-36630000(probes 198573:198575)  	chr14:30050001-39939999(probes 197846:198924)  	2.6559e-07	 2.6559e-07		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	2	1	1	1	1	2	1	1	0	0	0	0	0	1	2	0	1	1	1	1	1	0	0	1	0	1	0	0	1	1	0	2	1	1	1	2	2	0	1	2	1	0	1	2	1	2	0	1	2	0	2	1	1	1	1	1	1	0	0	
Amplification Peak 13	17q12   	chr17:37630001-83257441(probes 223834:228010)  	chr17:39510001-39520000(probes 224024:224025)  	chr17:38710001-40510000(probes 223936:224125)  	0.010109	   0.010109		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	1	1	1	1	1	1	0	1	1	1	0	1	1	1	1	1	0	0	0	0	1	0	0	1	1	1	0	0	1	0	0	0	0	0	1	2	1	1	0	1	1	1	1	0	1	1	0	1	0	0	1	1	1	2	1	1	0	1	
Amplification Peak 14	19q12   	chr19:29620001-29880000(probes 237189:237222)  	chr19:29760001-29770000(probes 237205:237206)  	chr19:29030001-30059999(probes 237119:237244)  	0.0011313	  0.0011313		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	0	0	0	0	1	0	2	0	1	1	0	2	0	1	0	0	0	0	2	1	0	0	1	1	0	0	0	0	0	2	0	0	0	0	0	0	0	1	0	1	2	0	1	1	2	0	0	0	0	1	0	1	0	0	0	1	0	0	0	
Amplification Peak 15	Xq28    	chrX:145500001-155960000(probes 265718:266486)	chrX:154330002-154410000(probes 266457:266459)	chrX:108160001-156040895(probes 262514:266501)	0.00045783	 0.00045783		0: t<0.1; 1: 0.1<t< 0.9; 2: t>0.9	1	1	2	1	1	0	0	0	1	1	0	1	1	0	0	1	1	0	2	2	1	1	2	1	1	1	0	0	1	1	0	1	1	2	0	1	1	1	0	1	1	1	1	0	0	1	0	1	0	1	1	1	1	0	0	2	1	2	1	
Deletion Peak  1	1p13.2  	chr1:1-149940000(probes 1:11279)                    	chr1:111840002-112009999(probes 10451:10466)  	chr1:100240001-119469999(probes 9412:11225) 	0.077302	   0.077302		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	0	1	0	0	1	1	1	0	0	0	0	1	0	0	0	0	1	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	1	1	0	1	0	0	0	0	0	0	0	0	0	1	1	0	1	0	1	0	1	0	0	
Deletion Peak  2	3p24.1  	chr3:1-97759999(probes 42507:51493)                  	chr3:28570001-28799999(probes 44761:44781)      	chr3:28660002-28690000(probes 44772:44773)    	0.12749	    0.13263		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	0	1	1	0	1	0	1	0	1	0	0	1	0	1	1	1	1	1	0	0	1	1	0	1	0	1	1	1	1	0	1	1	1	0	0	0	1	1	1	0	0	1	1	0	1	0	0	1	0	0	0	0	1	1	0	1	
Deletion Peak  3	4q35.2  	chr4:187670001-190179999(probes 78175:78202)	chr4:187840002-190119999(probes 78193:78194)  	chr4:187850002-190120000(probes 78194:78195)	0.00046464	 0.00046464		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	1	1	0	1	0	0	0	0	1	1	1	1	0	0	1	0	0	0	1	0	0	1	1	0	0	0	0	1	0	0	0	1	1	1	0	0	1	0	1	0	1	1	1	1	0	0	0	1	0	0	0	0	0	0	1	1	0	
Deletion Peak  4	5q11.2  	chr5:44800001-154070000(probes 82236:92145)  	chr5:58950002-59050000(probes 83131:83142)      	chr5:58990001-59430000(probes 83136:83176)    	0.033878	   0.033878		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	0	0	1	1	0	1	0	1	0	0	1	0	1	0	0	0	1	1	0	0	0	0	1	0	0	0	0	1	0	1	0	1	1	0	0	1	1	0	0	1	1	0	1	0	0	0	0	1	1	1	1	0	1	0	1	0	1	
Deletion Peak  5	6q21    	chr6:63570001-170805979(probes 100464:110565)	chr6:104920001-105180000(probes 104340:104368)	chr6:66420001-124479999(probes 100744:106235)	0.0047867	  0.0047867		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	1	0	0	0	0	0	0	0	1	1	1	1	1	0	1	1	0	1	1	1	1	1	0	0	0	1	0	1	1	1	0	0	1	1	0	0	0	1	0	0	1	0	1	0	0	1	0	1	0	1	1	1	0	1	
Deletion Peak  6	8p22    	chr8:1-32149999(probes 124324:126778)                	chr8:13580001-13809999(probes 124997:124998)    	chr8:80002-36380000(probes 124334:127202)       	8.8881e-06	 8.8881e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	0	0	1	1	1	1	1	0	0	0	0	0	1	1	1	1	0	0	1	1	0	1	0	0	0	1	0	1	1	0	1	0	1	1	0	1	1	1	0	1	1	1	0	1	1	0	1	1	1	1	1	0	1	1	1	1	0	0	
Deletion Peak  7	9p23    	chr9:7790001-10630000(probes 138392:138617)    	chr9:8290001-10630000(probes 138431:138617)      	chr9:8900001-10189999(probes 138495:138596)    	2.8977e-05	   0.014671		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	0	1	1	0	1	0	0	1	1	1	0	0	1	0	1	0	0	1	1	0	0	1	1	1	0	1	1	1	1	0	0	1	0	1	1	1	1	0	1	1	1	1	1	1	1	1	0	1	1	0	0	1	1	1	0	1	
Deletion Peak  8	9p21.3  	chr9:21860002-22010000(probes 139647:139665)  	chr9:21950002-22010000(probes 139658:139665)    	chr9:19940001-26490000(probes 139440:140113)  	5.5159e-12	 1.2568e-10		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	1	1	1	1	1	0	1	1	1	0	0	1	0	1	0	1	1	0	0	0	1	1	1	0	1	1	1	1	0	0	0	0	1	1	1	1	0	1	1	1	1	1	1	1	1	1	0	1	1	0	1	1	1	0	0	
Deletion Peak  9	10q24.32	chr10:1-133797422(probes 148108:160122)            	chr10:99600002-103530000(probes 156936:157328)	chr10:99620002-99649999(probes 156938:156939)	0.23666	     0.2378		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	0	1	0	1	0	0	1	1	1	0	0	0	1	0	1	0	1	0	0	0	1	0	0	0	0	0	1	0	1	1	0	0	0	0	1	0	1	0	0	0	0	0	1	1	0	0	0	1	0	0	1	0	1	1	1	1	1	
Deletion Peak 10	13q11   	chr13:1-18870000(probes 184357:186257)              	chr13:18190001-18240000(probes 186217:186225)  	chr13:18060001-18430000(probes 186202:186254)	5.7909e-07	 5.7909e-07		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	0	1	0	0	0	0	1	1	1	1	1	1	1	1	1	1	1	1	1	0	0	1	1	1	1	1	1	1	1	1	0	0	1	0	1	1	1	1	1	1	0	1	0	1	1	1	0	1	1	1	0	1	1	1	1	
Deletion Peak 11	15q13.1 	chr15:1-57570000(probes 205357:210283)              	chr15:27840001-30850000(probes 207767:207776)  	chr15:28230002-28300000(probes 207772:207773)	0.096808	   0.096808		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	0	0	1	1	1	1	0	1	0	0	0	1	0	1	0	1	0	1	1	0	0	1	1	1	1	1	1	1	1	1	1	1	1	0	0	1	1	0	1	1	1	1	1	1	1	1	0	0	0	1	0	1	0	1	
Deletion Peak 12	17p13.1 	chr17:130002-20420000(probes 220654:222311)    	chr17:8750001-8809999(probes 221369:221374)      	chr17:120001-22839999(probes 220651:222422)    	1.181e-07	  1.181e-07		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	0	1	1	1	1	1	1	1	1	1	1	1	1	0	1	1	1	1	1	0	1	1	1	1	0	1	0	1	1	1	0	1	1	1	1	1	1	1	0	1	1	0	0	1	0	1	1	1	0	1	1	1	0	1	
Deletion Peak 13	21p11.2 	chr21:7820002-8989999(probes 246509:246668)    	chr21:8430001-8450000(probes 246591:246593)      	chr21:7920001-10180000(probes 246522:246833)  	1.4111e-10	 3.5867e-09		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	1	1	0	1	1	0	1	1	1	0	0	1	1	0	1	0	1	0	0	1	1	1	0	0	1	1	0	1	1	1	1	1	1	1	1	1	0	1	1	0	0	1	0	1	1	1	1	1	1	0	0	1	1	1	1	
Deletion Peak 14	21q11.2 	chr21:8440002-25570000(probes 246593:247944)  	chr21:10330001-13999999(probes 246852:246855)  	chr21:10270001-13999999(probes 246844:246855)	1.113e-05	   0.013251		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	1	0	0	0	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	1	1	0	0	0	1	0	1	0	0	0	0	1	0	0	0	0	0	0	1	0	0	0	0	0	0	1	1	0	0	0	0	0	0	1	
Deletion Peak 15	22p11.2 	chr22:10960002-16939999(probes 251028:251553)	chr22:11880002-11969999(probes 251154:251163)  	chr22:11640001-12199999(probes 251120:251199)	1.3222e-06	 1.3222e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	1	1	1	1	0	1	0	1	0	0	1	0	0	0	0	1	1	1	0	1	1	0	0	0	1	1	0	0	1	0	0	0	1	1	0	0	0	0	1	1	0	1	0	0	0	0	0	1	1	0	1	0	1	1	1	1	0	1	0	
Deletion Peak 16	22q13.32	chr22:43850001-50818468(probes 253635:254133)	chr22:48520002-48559999(probes 254090:254092)  	chr22:43930001-50818468(probes 253644:254133)	0.020998	   0.021452		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	1	1	1	1	1	1	0	0	1	1	0	0	1	1	1	1	0	0	1	1	1	0	1	1	1	0	0	1	1	0	0	1	1	1	0	1	1	0	1	0	1	1	0	1	1	0	1	0	1	0	0	1	0	1	1	1	0	1	
Deletion Peak 17	Xp22.33 	chrX:1-150909999(probes 254134:266209)              	chrX:250001-3249999(probes 254168:254169)          	chrX:1-3269999(probes 254134:254171)                  	5.54e-05	   5.54e-05		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	0	0	0	1	1	0	0	0	0	0	0	1	1	0	0	1	0	0	1	0	1	0	0	1	0	1	0	0	0	1	0	0	1	0	1	0	0	1	0	0	0	0	0	0	0	0	1	1	0	0	0	0	1	0	0	0	0	
Deletion Peak 18	Yq11.223	chrY:23190001-23940000(probes 269034:269119)  	chrY:23200001-23309999(probes 269035:269047)    	chrY:16550001-26299999(probes 268308:269382)  	1.6723e-06	 1.5435e-06		0: t>-0.1; 1: -0.1>t> -1.3; 2: t< -1.3	0	0	1	1	1	1	1	0	1	0	1	0	1	1	1	1	1	1	1	0	0	0	1	1	0	1	1	1	1	0	0	1	1	1	1	1	0	1	1	1	1	0	1	1	1	0	0	0	0	0	1	0	1	1	1	1	1	1	0	
Amplification Peak  1 - CN values	1q21.3  	chr1:119990001-156860000(probes 11275:11966)  	chr1:151220001-151350000(probes 11404:11417)  	chr1:119990002-157270000(probes 11276:12006)  	0.0071758	  0.0071758		Actual Copy Change Given	0.19657	0.26606	0.96099	0.12516	0.032284	1.7531	0.071984	0.19921	0.070342	0.32906	0.79456	0.011806	0.10201	1.118	0.75062	0.43169	0.99142	0.36434	1.2599	-0.026517	1.776	0.82847	0.2116	0.80283	0.44081	0.12328	0.27378	0.024277	0.70483	0.37283	0.036324	0.035782	0.37575	0.82922	0.47631	1.1619	0.54642	0.73548	0.35154	0.102	0.85206	0.22907	0.2853	0.16965	0.48237	0.32954	-0.071106	0.61446	0.22409	0.50584	0.16663	0.18669	0.61611	-0.016747	0.47134	0.096774	0.26953	0.0046789	0.34281	
Amplification Peak  2 - CN values	3q26.2  	chr3:89260001-198295559(probes 50576:60774)    	chr3:169790001-169890000(probes 58353:58363)  	chr3:169790001-169920000(probes 58353:58366)  	0.23631	    0.23631		Actual Copy Change Given	-0.21526	0.044232	0.25149	0.10005	0.20469	0.80394	0.010866	0.031097	0.40966	0.19114	0.020679	0.014947	-0.0075629	0.0032941	-0.0686	0	0.20975	-0.62771	0.070381	1.3046	0.03089	-0.0031818	0.0012187	0.64163	0.52647	-0.068967	0.018876	0.00011781	0.3169	0.0359	0.073532	-0.17212	0.39923	0.17316	0.060149	0.40106	0.24507	0.024599	0.48407	-0.29988	0.029747	0.25538	0.21177	0.6294	0.25267	-0.18801	-0.0044859	0.0055246	0.013559	0.099157	0.59072	0.35044	-0.012379	0.061713	0.15218	-0.37322	0	-0.00094422	0.99847	
Amplification Peak  3 - CN values	4q12    	chr4:54400001-54590000(probes 65625:65646)      	chr4:54410001-54450000(probes 65626:65630)      	chr4:54030001-55430000(probes 65581:65739)      	0.0047651	  0.0047651		Actual Copy Change Given	0.041788	-0.020956	0.011377	0.036556	0.69232	1.7973	-0.00019875	0.08764	-0.00012948	0.0016614	-0.0044637	-0.14796	0	-0.12302	0.58044	-0.040895	0.05143	0.060477	-0.45586	0.036879	-0.025165	-0.0079997	-0.032422	-0.23289	0	0.0034828	-0.0311	-0.0091841	-0.39153	0.6006	-0.29396	-0.24088	-0.00098257	1.2773	0.064668	-0.097924	0.13257	0.0028567	-0.076862	0.34157	-0.086433	3.6569	3.4546	-0.10459	-0.46066	-0.079979	-0.099694	0.21869	0.096741	-0.16736	-0.16612	0.40944	0.12403	0.21027	0.023565	0.085307	-0.11467	-0.0066418	0.21129	
Amplification Peak  4 - CN values	5p15.33 	chr5:980001-1880000(probes 78220:78245)            	chr5:1290001-1300000(probes 78228:78229)          	chr5:1-12269999(probes 78210:79252)                    	0.00092508	 0.00092508		Actual Copy Change Given	0.19691	0.11672	1.0462	1.0241	0.45908	1.7733	2.7693	0.14884	2.0609	0.12755	0.033413	0.2206	0.57326	0.84405	1.8267	0.39905	0.59905	0.68556	0.10652	0.41992	0.034668	0.79793	0.71555	0.56452	0.43409	0.028029	2.1859	0.34883	0.16153	2.727	0.041598	0.09499	0.3354	0.94551	0.803	0.11303	0.18784	0.45853	0.25366	-0.24228	0.27834	1.0935	0.6326	0.14402	1.3449	0.18725	0.034599	0.6937	0.34965	0.2033	0.42688	0.6665	0.1387	0.66971	0.50755	0.7993	0.56494	1.9144	0.22085	
Amplification Peak  5 - CN values	6p21.1  	chr6:1-61529999(probes 94811:100269)                   	chr6:41650001-41660000(probes 98650:98651)      	chr6:41590001-41829999(probes 98643:98669)      	0.16136	    0.16136		Actual Copy Change Given	0.06177	-0.14298	0.0020559	0.031976	-0.026386	0.0058425	0.32569	-0.01489	0.56791	0.14209	0.0019717	0.0974	0.08524	0.1564	0.054001	0.18129	-0.29725	0.074101	0.42658	0.21462	0.38984	0.0083898	0.074004	-0.054474	0.35243	0.29234	0.017641	0.0088176	0.67986	0.038209	0.0062571	3.6569	0.3365	0.84971	0.093264	0.18276	0	0.29002	0.50344	0.35605	0.29214	0.19136	0.71021	0.8871	0.0090219	0.16307	0.20533	0.20356	0.31231	0.055094	-0.032484	0.30862	0.016343	0.15252	0.25586	0.15528	0.25255	0.0017408	0.053243	
Amplification Peak  6 - CN values	7p11.2  	chr7:54710001-55440000(probes 115597:115677)    	chr7:54970001-55130000(probes 115626:115641)    	chr7:52070001-57159999(probes 115321:115821)    	2.1276e-06	 2.1276e-06		Actual Copy Change Given	3.6569	0.62123	0.17501	0.58259	0.12861	0.36874	0.40728	0.047197	0.18888	0.13096	0.048215	0.0066461	0.068075	0.27077	1.9495	1.0574	0.17843	0.061862	1.9006	0.123	-0.59028	0.86827	0.78671	0.92876	0.40649	1.3105	-0.0032887	0.0060207	3.6569	0.30821	0.062313	3.6569	0.34401	0.42387	-0.12231	0.31002	-0.17001	0.0056157	-0.014318	0.024206	0.37382	1.8839	0.036263	0.33255	0	1.002	0.084183	0.59256	0.58081	0.22459	0.32195	3.6569	0.16231	0.12399	0.59435	0.47884	2.4842	3.6569	0.2244	
Amplification Peak  7 - CN values	7q11.21 	chr7:56150002-159345973(probes 115758:124323)  	chr7:65780001-65830000(probes 115956:115961)    	chr7:65780001-65850000(probes 115956:115964)    	0.23631	    0.23631		Actual Copy Change Given	0.31756	0.41605	0.24052	0.83254	0.12828	-0.063055	0.3286	0.050703	0.217	0.11791	0.050557	0.11338	0.036619	0.27732	0.63251	0.18011	0.1582	0.062469	0.72166	0.13549	-0.91595	0.8321	0.40546	-0.017	0.3567	0.71765	0.30191	0.0016068	2.346	0.30323	-0.013009	2.6876	0.34916	0.43011	-0.10088	0.61905	-0.10827	-0.46394	-0.21424	0.039532	0.39118	0.4433	0.047652	-0.21996	0.02619	0.21036	0.089219	0.35839	0.28971	0.15703	0.3343	2.0555	0.15849	0.18575	0.63855	0.16888	0.78654	0.39598	-0.07788	
Amplification Peak  8 - CN values	8q24.21 	chr8:128140001-128209999(probes 136397:136406)	chr8:128160001-128190000(probes 136400:136403)	chr8:79670001-145138636(probes 131315:137906)  	2.4624e-07	 2.4624e-07		Actual Copy Change Given	3.6569	0.49564	0.38044	0.17463	0.22249	0.41904	0	0.54657	0	0.08922	0.033119	0.0020517	0.002415	0.86495	1.159	-0.055008	0.013251	0.056763	-0.047405	1.5065	0.68729	-0.0047789	0.37894	0.68267	0.46847	-0.021487	0.42993	-0.0039781	0.85003	0.53902	0.030505	3.6569	0.78991	0.792	0.79285	0.014202	2.6484	0.4891	0.1414	0.98536	0.15122	0.35851	0.35623	0	-0.45277	0.5687	0.087673	0.67177	0	0.96214	0.17535	2.1611	0.90781	0.69971	1.4147	-0.13803	2.2533	0.97508	0.13454	
Amplification Peak  9 - CN values	11q13.3 	chr11:68860002-70000000(probes 165962:166082)  	chr11:69330001-69400000(probes 166013:166020)  	chr11:68750001-70370000(probes 165948:166122)  	0.00070732	 0.00070732		Actual Copy Change Given	0.067123	0.18455	-0.01995	0.18985	-0.095273	1.054	0.03011	0.048325	0.42278	0.062881	-0.021092	0.2078	-0.016667	0.13082	0.23675	0.20451	0	0.69261	-0.10014	0.1244	3.6569	0.0044257	0.032933	0.46236	0.43567	0.49754	0.28391	0.048122	-0.16114	-0.30977	0.060617	0.49467	-0.064426	0.24078	0.11711	-0.050835	0.18705	0.032133	-0.052349	0.042472	-0.069919	0.35603	-0.12175	0.20578	0.010523	0.25511	1.2258	0.2501	-0.011589	0.37768	0.13605	3.6569	0.15639	1.9315	-0.14956	-0.064034	0.84216	0.006039	0.2167	
Amplification Peak 10 - CN values	12p11.21	chr12:32300001-32520000(probes 175216:175240)  	chr12:32310001-32320000(probes 175217:175218)  	chr12:32310001-32540000(probes 175217:175242)  	0.034331	   0.034331		Actual Copy Change Given	0.33126	0.12266	2.4101	-0.05862	0.28219	0.087634	-0.26263	-0.11409	-0.02048	-0.1439	2.9706	0.13198	0.0057383	0.0054788	-0.14286	0.055156	-0.29139	-0.052076	-0.11388	0.63783	-0.0036183	-0.016097	0.0079338	0.15751	0.69949	-0.013149	0.034187	0.082464	0.38398	-0.0002195	0.47659	-0.023475	0.29227	-0.058144	-0.30827	-0.050843	-0.45495	-0.15781	0.10087	3.6569	0.065765	-0.0061878	-0.16669	1.3139	-0.036922	0.052539	-0.064283	0.41183	0.11602	0.24205	0.14	0.18784	-0.17145	0.045849	0.011342	-0.39095	-0.14571	-0.0021295	-0.21621	
Amplification Peak 11 - CN values	12q14.1 	chr12:58410001-58480000(probes 177249:177255)  	chr12:58420001-58470000(probes 177250:177254)  	chr12:58420001-58499999(probes 177250:177257)  	0.029211	   0.029211		Actual Copy Change Given	0.36682	-0.0839	0.00098242	0	0.34983	2.4035	0.017265	-0.1158	-0.042138	-0.13797	0.065857	0.11916	0.10029	-0.0011812	-0.15286	0.081098	-0.30036	-0.10593	-0.098722	0.073473	0.033605	-0.0044495	0.0049447	0.15535	0.76618	-0.052293	0.021956	0.084562	3.6569	0.021459	-0.2832	3.6569	-0.064056	-0.093528	-0.29689	-0.053221	0.21151	-0.20557	0.14113	0.010169	-0.084636	0.20269	0.033422	-0.095236	-0.035622	0.12013	-0.055985	-0.03609	0.058951	0.28956	0.019642	-0.029256	-0.16449	0.11792	0.2479	-0.39026	0.00010578	-0.00082703	-0.21294	
Amplification Peak 12 - CN values	14q13.3 	chr14:36600002-36640000(probes 198572:198576)  	chr14:36610001-36630000(probes 198573:198575)  	chr14:30050001-39939999(probes 197846:198924)  	2.6559e-07	 2.6559e-07		Actual Copy Change Given	1.1747	0.14813	0.20897	0.10298	0.60739	1.1209	0.28202	0.31664	-0.024933	0.016734	0.023031	-0.13162	-0.013968	0.37015	1.0633	0.083762	0.12923	0.71128	0.77663	0.38905	0.55826	-0.00036039	0.0070094	0.38508	-0.029184	0.60145	0.06788	-0.0063793	0.58053	0.37398	0	1.1577	0.34071	0.63779	0.59625	1.7369	3.3405	-0.22038	0.44527	1.0094	0.41225	0.094622	0.37203	2.5364	0.46422	2.5198	0.019684	0.64131	3.6569	-0.18255	0.94593	0.72179	0.14075	0.34939	0.27082	0.19411	0.50171	0.0069231	-0.23166	
Amplification Peak 13 - CN values	17q12   	chr17:37630001-83257441(probes 223834:228010)  	chr17:39510001-39520000(probes 224024:224025)  	chr17:38710001-40510000(probes 223936:224125)  	0.010109	   0.010109		Actual Copy Change Given	-0.053597	0.12759	0.24854	0.27944	0.32981	0.86889	0.33093	0.052316	0.44747	0.14649	0.13073	0.0074107	0.12557	0.38766	0.3133	0.35293	0.17824	-0.24854	-0.062836	0.0045612	0.074338	0.4663	0.038261	-0.036352	0.44707	0.29144	0.32048	0.025687	-0.13655	0.77271	-0.022485	0.047992	-0.002229	0.077421	-0.074114	0.20034	3.6569	0.33497	0.14489	0.03752	0.29545	0.23446	0.18499	0.30821	0.024685	0.14015	0.40752	0.028203	0.20048	0.056861	0.0067559	0.31146	0.19082	0.19974	0.96808	0.24008	0.66656	0.0046753	0.37546	
Amplification Peak 14 - CN values	19q12   	chr19:29620001-29880000(probes 237189:237222)  	chr19:29760001-29770000(probes 237205:237206)  	chr19:29030001-30059999(probes 237119:237244)  	0.0011313	  0.0011313		Actual Copy Change Given	-0.043837	-0.12316	-0.023596	-0.2839	0.59717	-0.023543	1.0144	-0.11848	0.23587	0.11951	-0.7823	3.6569	-0.040545	0.20683	-0.089087	0.013795	-0.082616	-0.074619	3.6569	0.4267	0.031957	-0.0038022	0.16388	0.22769	-0.11952	0	-0.063586	0.018611	-0.21052	1.0939	0.042299	-0.067119	-0.030591	-0.18833	-0.1327	-0.080843	-0.28811	0.26141	-0.11497	0.2836	1.9726	-0.10115	0.11171	0.1012	1.1341	-0.22848	-0.061225	-0.17469	0.052268	0.2995	-0.024916	0.55389	0.03737	-0.13411	-0.15225	0.30324	-0.36726	0.06374	0.0028226	
Amplification Peak 15 - CN values	Xq28    	chrX:145500001-155960000(probes 265718:266486)	chrX:154330002-154410000(probes 266457:266459)	chrX:108160001-156040895(probes 262514:266501)	0.00045783	 0.00045783		Actual Copy Change Given	0.21221	0.72003	1.152	0.10426	0.18619	-0.36275	0.033305	0.033765	0.60349	0.33215	0.044507	0.54202	0.43275	-0.01141	-0.32774	0.69348	0.15639	0.0018576	1.1886	2.5273	0.35012	0.82637	1.4033	0.83519	0.34366	0.15404	-0.0019095	-0.3846	0.39586	0.36338	-0.028297	0.68675	0.68799	1.8266	-0.013909	0.17239	0.36005	0.29415	0.0016547	0.50056	0.56563	0.76367	0.10023	-0.11136	-0.0060928	0.64042	0.068226	0.31677	0.083404	0.55387	0.17019	0.26045	0.17917	-0.0454	0.044191	1.113	0.88397	1.946	0.20386	
Deletion Peak  1 - CN values	1p13.2  	chr1:1-149940000(probes 1:11279)                    	chr1:111840002-112009999(probes 10451:10466)  	chr1:100240001-119469999(probes 9412:11225) 	0.077302	   0.077302		Actual Copy Change Given	-0.034614	-0.068203	-0.25803	0.0067984	0.033431	-0.36538	0.036562	0.047565	-0.16165	-0.14635	-0.802	0.1498	0.11694	0.11052	0.68401	-0.13492	-0.065375	0.041902	0.25494	0.10619	-0.60523	0.013223	-0.0014742	-0.41827	0.46664	-0.0019716	0.17275	9.9318e-05	0.18598	-0.0030483	-0.28688	-0.014551	-0.05345	-0.01754	0.088354	-0.054602	-0.17801	-0.22055	-0.0060178	-0.36753	0.045113	0.14796	-0.036448	-0.081325	0.0078693	0.27524	-0.069371	0.07081	0.10542	-0.19189	-0.15988	0.050352	-0.1799	-0.037568	-0.23476	0.091199	-0.28029	0.0048476	0.0016583	
Deletion Peak  2 - CN values	3p24.1  	chr3:1-97759999(probes 42507:51493)                  	chr3:28570001-28799999(probes 44761:44781)      	chr3:28660002-28690000(probes 44772:44773)    	0.12749	    0.13263		Actual Copy Change Given	-0.22326	-0.18886	-0.2497	0.0043126	-0.17575	-0.36536	-0.036626	-0.11973	0.009783	-0.14088	0.011024	-0.14706	-0.0063413	-0.010995	-0.25971	-0.027292	-0.29493	-0.72774	-0.26917	-0.15124	-0.59311	0.0010946	0.0059731	-0.25468	-0.52976	-0.071889	-0.12644	0	-0.33548	-0.36209	-0.29074	-0.30166	0.21416	-0.17396	-0.27163	-0.28961	0.13488	0	0.036369	-0.34061	-0.10968	-0.22545	-0.084045	0.28022	-0.43778	-0.20933	-0.0034971	-0.22208	-0.077586	0.046311	-0.19133	-0.068491	-0.0089432	-0.082296	-0.050576	-0.36349	-0.42686	0.0053148	-0.20879	
Deletion Peak  3 - CN values	4q35.2  	chr4:187670001-190179999(probes 78175:78202)	chr4:187840002-190119999(probes 78193:78194)  	chr4:187850002-190120000(probes 78194:78195)	0.00046464	 0.00046464		Actual Copy Change Given	-0.28676	-0.043793	-0.39705	-0.47109	-0.0094651	-0.3382	-0.0014464	0.022109	0.069115	0.15677	-0.49865	-0.16293	-0.18813	-0.12302	0.41055	-0.040895	-0.16159	0.011242	-0.081248	0.06578	-0.27667	-0.012953	0.01096	-0.23379	-0.54913	0.047875	0.22155	0.2591	0.18312	-0.13895	0.054862	0.0053983	-0.00098257	-0.25184	-0.13569	-0.26708	0.24588	0.0078139	-0.11828	0.00067676	-0.22636	0.069827	-0.11597	-0.40341	-0.11419	-0.15094	-0.065917	0	-0.070326	-0.2059	-0.046276	-0.040321	0.13428	0.10433	0	0.2756	-0.32358	-0.22247	0.21585	
Deletion Peak  4 - CN values	5q11.2  	chr5:44800001-154070000(probes 82236:92145)  	chr5:58950002-59050000(probes 83131:83142)      	chr5:58990001-59430000(probes 83136:83176)    	0.033878	   0.033878		Actual Copy Change Given	-0.048437	-0.34841	-0.049956	-0.05654	-0.13641	-0.36171	0.13571	-0.1123	-0.079023	-0.13953	0	-0.019815	-0.12362	0.0027351	-0.34419	0.2987	0.0012338	0.019036	-0.10656	-0.36876	0.0084664	0	-0.0033357	0.11157	-0.52818	0.047782	0.04365	0.36549	0.010665	-0.7016	0.073005	-0.2295	0.35661	-0.46082	-0.29881	-0.055334	0.096009	-0.22316	-0.12513	0.011853	0.14684	-0.21655	-0.14568	0.76431	-0.44991	0.15839	0.062666	0.52703	0.12866	-0.17167	-0.19332	-0.12206	-0.18221	0	-0.12156	0.4415	-0.20087	0.0050668	-0.21861	
Deletion Peak  5 - CN values	6q21    	chr6:63570001-170805979(probes 100464:110565)	chr6:104920001-105180000(probes 104340:104368)	chr6:66420001-124479999(probes 100744:106235)	0.0047867	  0.0047867		Actual Copy Change Given	-0.23566	-0.21877	-0.22783	-0.28103	-0.1613	-0.36778	-0.001941	-0.017338	0.010232	0	-0.010248	0	0.089207	-0.13597	-0.12218	-0.15835	-0.30404	-0.71121	0.20625	-0.35443	-0.49164	-0.012663	-0.40653	-0.24345	-0.51737	-0.17745	-0.32867	-0.001265	0.0015158	0	-0.28257	0	-0.29962	-0.39356	-0.31997	0.15485	-0.022601	-0.45932	-0.15997	0	-0.085234	0.021228	-0.1621	0.1625	-0.0028362	-0.24357	0.18988	-0.18192	-0.095003	0	-0.344	-0.03495	-0.19103	0.11701	-0.25414	-0.10196	-0.77848	-0.006106	-0.20501	
Deletion Peak  6 - CN values	8p22    	chr8:1-32149999(probes 124324:126778)                	chr8:13580001-13809999(probes 124997:124998)    	chr8:80002-36380000(probes 124334:127202)       	8.8881e-06	 8.8881e-06		Actual Copy Change Given	-0.52035	-0.037648	0.20214	-0.26919	-0.16219	-0.31881	-0.27075	-0.17828	0.0041928	-0.069809	0.016287	-0.098923	-0.031569	-0.52829	-0.54935	-0.42757	-0.39726	0.038065	0.040882	-0.64099	-1.2634	-0.015136	-0.36703	-0.037455	0.43532	-0.05669	-0.29474	0.0012394	-0.30292	-0.37092	0.0080778	-0.46892	-0.0067053	-0.63554	-0.30131	0.28554	-0.55648	-0.25848	-0.21347	0.1182	-0.13127	-0.52671	-0.21369	-0.076466	-0.31241	-0.56024	0.081144	-0.51753	-0.19615	-0.2808	-0.18909	-0.40337	0.14613	-0.22738	-0.45199	-0.45389	-0.6396	0.0057264	-0.010277	
Deletion Peak  7 - CN values	9p23    	chr9:7790001-10630000(probes 138392:138617)    	chr9:8290001-10630000(probes 138431:138617)      	chr9:8900001-10189999(probes 138495:138596)    	2.8977e-05	   0.014671		Actual Copy Change Given	-0.037138	0.48363	-0.44099	0.11505	-0.30036	-0.37169	-0.081279	-0.12441	0.029356	-0.060447	-0.77965	-0.14789	-0.19445	-0.011632	-0.08592	-0.35712	0.16476	-0.7129	-0.022749	0.1389	-0.33366	-0.70308	0.14807	-0.067483	-0.53541	-0.61482	-0.32626	-0.0029943	-0.40791	-0.36878	-0.2956	-0.34814	0.45921	0.26794	-0.32718	0.71003	-0.12728	-0.2222	-0.18741	-0.60165	0.19061	-0.42658	-0.16366	-0.22958	-0.45472	-0.29448	-0.21818	-0.22537	-0.22078	0.21142	-0.20308	-0.83376	0.29772	-0.027517	-0.19288	-0.38139	-0.31657	-0.036531	-0.60515	
Deletion Peak  8 - CN values	9p21.3  	chr9:21860002-22010000(probes 139647:139665)  	chr9:21950002-22010000(probes 139658:139665)    	chr9:19940001-26490000(probes 139440:140113)  	5.5159e-12	 1.2568e-10		Actual Copy Change Given	-0.013879	0.10117	0.19211	-0.090354	-0.1537	-0.37169	-0.40834	-0.12441	-0.66243	-0.060447	-1.2929	-0.14789	-0.19445	-0.011632	-0.08592	-0.82561	0.16476	-1.2929	0.70345	-0.1193	-0.30252	-0.017259	0.13277	-0.067483	-0.53541	-0.93522	-0.30067	-0.0054365	-0.40791	-0.36878	-0.2956	-0.26135	0.45921	0.27314	-0.021372	0.71003	-0.46046	-0.2222	-0.18741	-0.60165	-0.069577	-0.74771	-0.15905	-0.22958	-0.45472	-0.39573	-0.21537	-0.22537	-0.22078	-0.1926	0.10255	-0.84414	-0.52336	-0.053892	-0.22862	-0.38139	-0.71817	-0.036531	0.21701	
Deletion Peak  9 - CN values	10q24.32	chr10:1-133797422(probes 148108:160122)            	chr10:99600002-103530000(probes 156936:157328)	chr10:99620002-99649999(probes 156938:156939)	0.23666	     0.2378		Actual Copy Change Given	-0.29138	-0.32103	-0.041819	-0.11547	0.020281	-0.67678	-0.037048	0.0086236	-0.23883	-0.12312	-0.78761	0.062976	-0.018669	0.21323	-0.19119	-0.034164	-0.30148	-0.0011058	-0.65721	0.19066	0	0.0012621	-0.38484	-0.026966	0.95603	-0.083368	0.0090432	-0.00071036	-0.21101	0.36479	-0.28928	-0.43715	-0.066046	0.10356	-0.021685	-0.061658	-0.14688	0.025554	-0.12305	0.36406	-0.059829	-0.010357	-0.016192	-0.054463	-0.23384	-0.24746	-0.066494	-0.05298	-0.074377	-0.13579	0.13089	-0.030758	-0.17551	0.047841	-0.24539	-0.37357	-0.36266	-0.23991	-0.20416	
Deletion Peak 10 - CN values	13q11   	chr13:1-18870000(probes 184357:186257)              	chr13:18190001-18240000(probes 186217:186225)  	chr13:18060001-18430000(probes 186202:186254)	5.7909e-07	 5.7909e-07		Actual Copy Change Given	-0.46885	-0.4125	-0.25894	-0.28163	-0.025566	-0.41792	-0.01201	0.026642	-0.090855	0.10244	-0.78895	-0.39002	-0.1158	-0.25742	-0.63977	-0.2604	-0.3094	-0.40681	-0.62038	-0.46283	-0.3289	-0.38386	-0.18979	0.083686	0.048624	-0.14634	-0.30652	-0.18148	-0.5888	-0.35175	-0.11072	-0.67828	-0.42871	-0.34928	-0.0076952	0.50246	-0.24476	-0.061215	-0.23125	-0.38947	-0.22065	-0.20953	-0.17218	-0.4275	-0.007296	-0.31176	0.073743	-0.23372	-0.18364	-0.46318	-0.014152	-0.32805	-0.29876	-0.16458	-0.025418	-0.47258	-0.40094	-0.42833	-0.34264	
Deletion Peak 11 - CN values	15q13.1 	chr15:1-57570000(probes 205357:210283)              	chr15:27840001-30850000(probes 207767:207776)  	chr15:28230002-28300000(probes 207772:207773)	0.096808	   0.096808		Actual Copy Change Given	-0.46047	-0.33983	-0.31743	-0.13631	-0.14188	-0.027522	-0.087829	-0.12722	-0.18386	-0.1132	-0.7951	-0.086783	-0.14772	-0.087634	-0.036402	-0.041055	-0.32404	0.063354	-0.2697	0.027333	-0.27761	-0.046213	-0.17944	-0.41245	1.1692	-0.077676	-0.29253	-0.32491	-0.45824	-0.38984	-0.25267	-0.261	-0.22429	-0.6038	-0.30895	-0.30776	-0.14529	-0.46117	0.16245	-0.072398	-0.36391	-0.30917	-0.043263	-0.10676	-0.45846	-0.33751	-0.22747	-0.20802	-0.19151	-0.2434	-0.16826	-0.012325	0.074219	-0.06563	-0.23373	-0.06948	-0.3989	-0.05471	-0.42951	
Deletion Peak 12 - CN values	17p13.1 	chr17:130002-20420000(probes 220654:222311)    	chr17:8750001-8809999(probes 221369:221374)      	chr17:120001-22839999(probes 220651:222422)    	1.181e-07	  1.181e-07		Actual Copy Change Given	-0.49534	-0.27204	-0.26564	-0.30142	-0.10669	0.34291	-0.25315	-0.11892	-0.21459	-0.16121	-0.80305	-0.13487	-0.12251	-0.27492	-0.16129	-0.27627	-0.31067	-0.78407	-0.080069	-0.31871	-0.56521	-0.42679	-0.3679	-0.62775	0.4047	-0.48013	-0.13784	-0.34613	-0.15529	0.42095	-0.29795	-0.016468	-0.35914	-0.67756	-0.30481	-0.047692	-0.43316	-0.23317	-0.11973	-0.34408	-0.25135	-0.35086	-0.15881	-0.086758	-0.45556	-0.31192	-0.060804	-0.0604	-0.15054	0.047149	-0.17026	-0.1168	-0.15827	0.025959	-0.19349	-0.3943	-0.60095	-0.0075816	-0.18958	
Deletion Peak 13 - CN values	21p11.2 	chr21:7820002-8989999(probes 246509:246668)    	chr21:8430001-8450000(probes 246591:246593)      	chr21:7920001-10180000(probes 246522:246833)  	1.4111e-10	 3.5867e-09		Actual Copy Change Given	-0.60432	-0.15061	-0.70737	-0.72317	-0.37617	-0.72868	-0.043867	-0.12457	-0.31173	-0.096104	-0.9264	-0.15806	-0.15181	-0.0984	0.0034161	-0.40152	-0.33812	-0.064523	-0.20839	0.10941	-0.5334	-0.058792	-0.060194	-0.29766	-0.6511	-0.12053	-0.012543	-0.0062976	-0.21663	-0.36588	-0.091106	-0.29184	-0.32174	-0.85278	-0.12795	-0.41829	-0.18782	-0.35765	-0.31536	-0.17636	-0.092031	-0.28674	-0.14167	-0.0047488	0.20957	-0.28758	-0.018738	-0.25244	-0.19368	-0.47204	-0.32025	-0.30265	-0.168	0.085642	8.8888e-05	-0.23229	-0.48411	-0.58334	-0.18186	
Deletion Peak 14 - CN values	21q11.2 	chr21:8440002-25570000(probes 246593:247944)  	chr21:10330001-13999999(probes 246852:246855)  	chr21:10270001-13999999(probes 246844:246855)	1.113e-05	   0.013251		Actual Copy Change Given	-0.035751	-0.15635	-0.28755	-0.28483	-0.247	0.38952	-0.029513	-0.0060879	-0.03305	0.032214	-0.010236	0.089079	-0.13482	0.29126	0.19106	-0.015533	0.14744	0.022137	0.2271	-0.19819	0.31202	-0.0024773	0.14817	0.16858	-0.14928	-0.4286	0.0014867	-0.0097096	0.42504	-0.33611	-0.058008	-0.14133	0.34094	0.064406	0.0083171	0.16726	-1.0897	-0.0019894	-0.036057	0.2853	0.018482	0.11586	0.051311	-0.15758	0.8951	0.095279	0.012049	0.1024	0.1722	-0.008726	-0.19923	-0.3442	-0.073869	0.015193	0.062543	1.1903	0.026693	-0.020086	-0.22338	
Deletion Peak 15 - CN values	22p11.2 	chr22:10960002-16939999(probes 251028:251553)	chr22:11880002-11969999(probes 251154:251163)  	chr22:11640001-12199999(probes 251120:251199)	1.3222e-06	 1.3222e-06		Actual Copy Change Given	-0.52974	-0.29281	-0.16087	-0.14207	-0.016189	-0.38241	-0.067179	-0.24469	-0.087589	-0.080574	-0.82951	-0.059855	-0.075034	0.029437	0.51604	-0.32111	-0.4267	-0.67437	0.0097102	-0.16202	-0.30447	-0.037078	-0.082828	-0.067137	-0.57012	-0.18376	0.03432	-0.038771	-0.75874	0.15157	-0.036996	-0.063757	-0.54161	-0.34736	-0.056168	0.074083	0.31159	-0.0039545	-0.30274	-0.18658	0.049103	-0.12542	-0.025152	-0.049663	0.55492	0.14424	-0.0084519	-0.51647	-0.13742	0.057449	-0.45665	-0.066154	-0.21576	-0.14553	-0.17693	-0.6179	0.26662	-0.80667	-0.047601	
Deletion Peak 16 - CN values	22q13.32	chr22:43850001-50818468(probes 253635:254133)	chr22:48520002-48559999(probes 254090:254092)  	chr22:43930001-50818468(probes 253644:254133)	0.020998	   0.021452		Actual Copy Change Given	-0.049094	-0.22431	-0.30645	-0.33782	-0.1287	-0.36857	-0.16111	-0.022534	0.096393	-0.14174	-0.80473	0.078903	-0.038431	-0.55028	-0.65596	-0.22858	-0.30873	-0.079253	0.038948	-0.3555	-0.54434	-0.40441	0.030034	-0.23994	-0.56055	-0.10076	0.16071	0.071773	-0.32719	-0.31592	0.045603	0.13608	-0.35839	-0.92296	-0.11414	-0.052936	-0.10114	-0.4628	0.042624	-0.33892	-0.079637	-0.12815	-0.23544	-0.0084757	-0.24113	-0.28804	-0.0092493	-0.23395	0.11244	-0.20311	-0.045747	-0.0092486	-0.14445	0.1431	-0.11685	-0.26859	-0.48526	0.87496	-0.19118	
Deletion Peak 17 - CN values	Xp22.33 	chrX:1-150909999(probes 254134:266209)              	chrX:250001-3249999(probes 254168:254169)          	chrX:1-3269999(probes 254134:254171)                  	5.54e-05	   5.54e-05		Actual Copy Change Given	-0.076133	0.2008	0.23768	0.17307	0.13139	-0.17704	-0.13297	-0.054662	0.17949	-0.069065	-0.0013701	0.056635	0.07429	-0.14903	-0.55669	0.78772	0.13434	-0.1054	0.15066	0.070961	-0.31898	0.77377	-0.37142	0.48473	0.34018	-0.2677	0	-0.36783	0.091375	0.30568	0.0085561	-0.27202	0.66881	-0.087026	-0.50988	1.0638	-0.59958	-0.011908	0.3826	-0.10365	0.23476	-0.05771	0	0.10017	0.0019624	0.096058	0.050296	0.09147	-0.23332	-0.18659	0.15131	-0.071669	0.16252	-0.046273	-0.17682	0.0087187	0.52633	0.010678	0.20454	
Deletion Peak 18 - CN values	Yq11.223	chrY:23190001-23940000(probes 269034:269119)  	chrY:23200001-23309999(probes 269035:269047)    	chrY:16550001-26299999(probes 268308:269382)  	1.6723e-06	 1.5435e-06		Actual Copy Change Given	0.42024	0.26584	-0.75621	-0.65248	-0.41198	-1.1098	-0.4136	0.01357	-0.57824	-0.029991	-0.12904	0.0065252	-0.58021	-0.58821	-0.51385	-0.82396	-0.81834	-0.71283	-0.90908	-0.053577	0.081298	-0.03237	-0.79043	-0.31377	0.92897	-0.76385	-0.62051	-0.49124	-0.13997	0.36832	0.056669	-0.10368	-0.75959	-1.2124	-0.94913	-0.3663	0.36579	-0.5768	-0.3753	-0.48141	-0.4909	-0.025209	-0.47418	-0.87145	-0.91409	0.15897	0.056727	0.17351	1.1855	1.1584	-0.60695	0.34451	-0.76161	-0.96958	-0.15054	-0.22009	-0.10036	-0.97429	0.17493