name	nmut	n_coding	n_flank	n_coding_nonsilent	fracflank	callscheme_name	cov_idx	N_tot	N_c	nsil_tot	nnon_tot	n_tot	rate_sil	rate_non	rate_tot	log_rate_tot	n_c	n_ind	N_ind	rate_c	rate_ind
TCGA-A1-A0SB-01A-11D-A142-09	16	16	0	13	0	coding only	1	28835288	...	3	9	15	1.040392e-07	3.121176e-07	5.201959e-07	-6.283833e+00	...	3	28779097	...	1.042423e-07
TCGA-A1-A0SD-01A-11D-A10Y-09	26	26	0	23	0	coding only	1	28835288	...	3	19	25	1.040392e-07	6.589149e-07	8.669932e-07	-6.061984e+00	...	3	28779097	...	1.042423e-07
TCGA-A1-A0SE-01A-11D-A099-09	25	24	1	17	4.000000e-02	coding only	1	28835288	...	7	15	24	2.427581e-07	5.201959e-07	8.323135e-07	-6.079713e+00	...	1	28779097	...	3.474744e-08
TCGA-A1-A0SF-01A-11D-A142-09	36	36	0	30	0	coding only	1	28835288	...	6	27	35	2.080784e-07	9.363527e-07	1.213791e-06	-5.915856e+00	...	2	28779097	...	6.949488e-08
TCGA-A1-A0SG-01A-11D-A142-09	31	31	0	26	0	coding only	1	28835288	...	5	21	31	1.733986e-07	7.282743e-07	1.075072e-06	-5.968563e+00	...	5	28779097	...	1.737372e-07
TCGA-A1-A0SH-01A-11D-A099-09	88	87	1	69	1.136364e-02	coding only	1	28835288	...	18	63	85	6.242351e-07	2.184823e-06	2.947777e-06	-5.530505e+00	...	3	28779097	...	1.042423e-07
TCGA-A1-A0SI-01A-11D-A142-09	190	185	5	136	2.631579e-02	coding only	1	28835288	...	48	133	189	1.664627e-06	4.612404e-06	6.554469e-06	-5.183462e+00	...	3	28779097	...	1.042423e-07
TCGA-A1-A0SJ-01A-11D-A099-09	29	28	1	24	3.448276e-02	coding only	1	28835288	...	4	20	27	1.387189e-07	6.935946e-07	9.363527e-07	-6.028561e+00	...	2	28779097	...	6.949488e-08
TCGA-A1-A0SK-01A-12D-A099-09	118	116	2	77	1.694915e-02	coding only	1	28835288	...	31	61	99	1.075072e-06	2.115464e-06	3.433293e-06	-5.464289e+00	...	5	28779097	...	1.737372e-07
TCGA-A1-A0SM-01A-11D-A099-09	28	26	2	21	7.142857e-02	coding only	1	28835288	...	5	13	28	1.733986e-07	4.508365e-07	9.710324e-07	-6.012766e+00	...	8	28779097	...	2.779795e-07
TCGA-A1-A0SN-01A-11D-A142-09	49	49	0	38	0	coding only	1	28835288	...	11	36	49	3.814770e-07	1.248470e-06	1.699307e-06	-5.769728e+00	...	2	28779097	...	6.949488e-08
TCGA-A1-A0SP-01A-11D-A099-09	39	39	0	31	0	coding only	1	28835288	...	8	22	37	2.774378e-07	7.629541e-07	1.283150e-06	-5.891723e+00	...	7	28779097	...	2.432321e-07
TCGA-A1-A0SQ-01A-21D-A142-09	26	26	0	19	0	coding only	1	28835288	...	7	14	26	2.427581e-07	4.855162e-07	9.016730e-07	-6.044951e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A04N-01A-11D-A10Y-09	41	41	0	32	0	coding only	1	28835288	...	9	27	40	3.121176e-07	9.363527e-07	1.387189e-06	-5.857864e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A04P-01A-31D-A128-09	109	107	2	87	1.834862e-02	coding only	1	28835288	...	20	81	107	6.935946e-07	2.809058e-06	3.710731e-06	-5.430541e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A04Q-01A-21W-A050-09	11	11	0	6	0	coding only	1	28835288	...	5	4	11	1.733986e-07	1.387189e-07	3.814770e-07	-6.418532e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A04R-01A-41D-A117-09	78	75	3	60	3.846154e-02	coding only	1	28835288	...	15	58	77	5.201959e-07	2.011424e-06	2.670339e-06	-5.573434e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A04T-01A-21W-A050-09	82	81	1	65	1.219512e-02	coding only	1	28835288	...	16	60	82	5.548757e-07	2.080784e-06	2.843738e-06	-5.546110e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A04U-01A-11D-A10Y-09	54	53	1	45	1.851852e-02	coding only	1	28835288	...	8	37	53	2.774378e-07	1.283150e-06	1.838026e-06	-5.735648e+00	...	7	28779097	...	2.432321e-07
TCGA-A2-A04V-01A-21W-A050-09	32	32	0	25	0	coding only	1	28835288	...	7	17	31	2.427581e-07	5.895554e-07	1.075072e-06	-5.968563e+00	...	7	28779097	...	2.432321e-07
TCGA-A2-A04W-01A-31D-A10Y-09	105	104	1	80	9.523810e-03	coding only	1	28835288	...	23	78	103	7.976338e-07	2.705019e-06	3.572012e-06	-5.447087e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A04X-01A-21W-A050-09	28	27	1	18	3.571429e-02	coding only	1	28835288	...	9	15	28	3.121176e-07	5.201959e-07	9.710324e-07	-6.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A04Y-01A-21W-A050-09	46	46	0	43	0	coding only	1	28835288	...	3	23	44	1.040392e-07	7.976338e-07	1.525908e-06	-5.816472e+00	...	18	28779097	...	6.254540e-07
TCGA-A2-A0CK-01A-11D-A228-09	22	22	0	12	0	coding only	1	28835288	...	10	10	22	3.467973e-07	3.467973e-07	7.629541e-07	-6.117502e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A0CL-01A-11D-A10Y-09	19	19	0	15	0	coding only	1	28835288	...	4	14	18	1.387189e-07	4.855162e-07	6.242351e-07	-6.204652e+00	...	0	28779097	...	0
TCGA-A2-A0CM-01A-31W-A050-09	53	53	0	43	0	coding only	1	28835288	...	10	30	50	3.467973e-07	1.040392e-06	1.733986e-06	-5.760954e+00	...	10	28779097	...	3.474744e-07
TCGA-A2-A0CO-01A-13D-A228-09	28	27	1	18	3.571429e-02	coding only	1	28835288	...	9	14	27	3.121176e-07	4.855162e-07	9.363527e-07	-6.028561e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A0CP-01A-11W-A050-09	79	77	2	73	2.531646e-02	coding only	1	28835288	...	4	23	79	1.387189e-07	7.976338e-07	2.739699e-06	-5.562297e+00	...	50	28779097	...	1.737372e-06
TCGA-A2-A0CQ-01A-21W-A050-09	35	34	1	23	2.857143e-02	coding only	1	28835288	...	10	19	34	3.467973e-07	6.589149e-07	1.179111e-06	-5.928445e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A0CR-01A-11D-A228-09	108	105	3	88	2.777778e-02	coding only	1	28835288	...	17	83	104	5.895554e-07	2.878418e-06	3.606692e-06	-5.442891e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A0CS-01A-11D-A10Y-09	33	33	0	26	0	coding only	1	28835288	...	7	20	33	2.427581e-07	6.935946e-07	1.144431e-06	-5.941410e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0CT-01A-31W-A071-09	75	75	0	55	0	coding only	1	28835288	...	20	49	75	6.935946e-07	1.699307e-06	2.600980e-06	-5.584863e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0CU-01A-12W-A050-09	39	38	1	32	2.564103e-02	coding only	1	28835288	...	6	16	38	2.080784e-07	5.548757e-07	1.317830e-06	-5.880141e+00	...	15	28779097	...	5.212116e-07
TCGA-A2-A0CV-01A-31D-A10Y-09	21	21	0	18	0	coding only	1	28835288	...	3	17	21	1.040392e-07	5.895554e-07	7.282743e-07	-6.137705e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A0CW-01A-21D-A10Y-09	57	57	0	49	0	coding only	1	28835288	...	7	43	53	2.427581e-07	1.491228e-06	1.838026e-06	-5.735648e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A0CX-01A-21W-A019-09	196	193	3	148	1.530612e-02	coding only	1	28835288	...	45	143	196	1.560588e-06	4.959201e-06	6.797227e-06	-5.167668e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A0CZ-01A-11W-A050-09	15	15	0	13	0	coding only	1	28835288	...	2	7	15	6.935946e-08	2.427581e-07	5.201959e-07	-6.283833e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0D0-01A-11W-A019-09	65	62	3	46	4.615385e-02	coding only	1	28835288	...	16	41	65	5.548757e-07	1.421869e-06	2.254182e-06	-5.647011e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A0D1-01A-11W-A050-09	72	71	1	53	1.388889e-02	coding only	1	28835288	...	17	28	69	5.895554e-07	9.710324e-07	2.392901e-06	-5.621075e+00	...	23	28779097	...	7.991912e-07
TCGA-A2-A0D2-01A-21W-A050-09	78	77	1	60	1.282051e-02	coding only	1	28835288	...	17	55	78	5.895554e-07	1.907385e-06	2.705019e-06	-5.567830e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A0D3-01A-11D-A10Y-09	26	26	0	19	0	coding only	1	28835288	...	7	15	26	2.427581e-07	5.201959e-07	9.016730e-07	-6.044951e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A0D4-01A-11W-A019-09	29	29	0	24	0	coding only	1	28835288	...	5	18	29	1.733986e-07	6.242351e-07	1.005712e-06	-5.997526e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0EM-01A-11W-A050-09	25	25	0	25	0	coding only	1	28835288	...	0	18	23	0	6.242351e-07	7.976338e-07	-6.098196e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A0EN-01A-13D-A099-09	33	32	1	27	3.030303e-02	coding only	1	28835288	...	5	22	32	1.733986e-07	7.629541e-07	1.109751e-06	-5.954774e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A0EO-01A-11W-A050-09	30	29	1	22	3.333333e-02	coding only	1	28835288	...	7	16	30	2.427581e-07	5.548757e-07	1.040392e-06	-5.982803e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0EP-01A-52D-A22X-09	3	2	1	2	3.333333e-01	coding only	1	28835288	...	0	2	3	0	6.935946e-08	1.040392e-07	-6.982803e+00	...	0	28779097	...	0
TCGA-A2-A0EQ-01A-11W-A050-09	79	77	2	61	2.531646e-02	coding only	1	28835288	...	16	55	79	5.548757e-07	1.907385e-06	2.739699e-06	-5.562297e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0ER-01A-21W-A050-09	26	26	0	21	0	coding only	1	28835288	...	5	17	26	1.733986e-07	5.895554e-07	9.016730e-07	-6.044951e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A0ES-01A-11D-A10Y-09	4	4	0	3	0	coding only	1	28835288	...	1	2	4	3.467973e-08	6.935946e-08	1.387189e-07	-6.857864e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A0ET-01A-31D-A045-09	29	28	1	21	3.448276e-02	coding only	1	28835288	...	7	18	28	2.427581e-07	6.242351e-07	9.710324e-07	-6.012766e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A0EU-01A-22W-A071-09	40	40	0	33	0	coding only	1	28835288	...	7	28	40	2.427581e-07	9.710324e-07	1.387189e-06	-5.857864e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A0EV-01A-11W-A050-09	58	58	0	49	0	coding only	1	28835288	...	9	41	58	3.121176e-07	1.421869e-06	2.011424e-06	-5.696496e+00	...	8	28779097	...	2.779795e-07
TCGA-A2-A0EW-01A-21D-A10Y-09	13	13	0	10	0	coding only	1	28835288	...	3	10	13	1.040392e-07	3.467973e-07	4.508365e-07	-6.345981e+00	...	0	28779097	...	0
TCGA-A2-A0EX-01A-21W-A050-09	27	25	2	22	7.407407e-02	coding only	1	28835288	...	3	14	26	1.040392e-07	4.855162e-07	9.016730e-07	-6.044951e+00	...	7	28779097	...	2.432321e-07
TCGA-A2-A0EY-01A-11W-A050-09	202	200	2	138	9.900990e-03	coding only	1	28835288	...	62	125	201	2.150143e-06	4.334966e-06	6.970626e-06	-5.156728e+00	...	12	28779097	...	4.169693e-07
TCGA-A2-A0ST-01A-12D-A099-09	7	7	0	4	0	coding only	1	28835288	...	3	4	7	1.040392e-07	1.387189e-07	2.427581e-07	-6.614826e+00	...	0	28779097	...	0
TCGA-A2-A0SU-01A-11D-A099-09	23	23	0	17	0	coding only	1	28835288	...	6	11	23	2.080784e-07	3.814770e-07	7.976338e-07	-6.098196e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0SV-01A-11D-A099-09	35	35	0	24	0	coding only	1	28835288	...	11	19	35	3.814770e-07	6.589149e-07	1.213791e-06	-5.915856e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A0SW-01A-11D-A099-09	50	48	2	39	4.000000e-02	coding only	1	28835288	...	8	31	49	2.774378e-07	1.075072e-06	1.699307e-06	-5.769728e+00	...	8	28779097	...	2.779795e-07
TCGA-A2-A0SX-01A-12D-A099-09	23	22	1	18	4.347826e-02	coding only	1	28835288	...	4	18	23	1.387189e-07	6.242351e-07	7.976338e-07	-6.098196e+00	...	0	28779097	...	0
TCGA-A2-A0SY-01A-31D-A099-09	127	127	0	97	0	coding only	1	28835288	...	29	91	126	1.005712e-06	3.155855e-06	4.369646e-06	-5.359554e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0T0-01A-22D-A099-09	163	159	4	129	2.453988e-02	coding only	1	28835288	...	29	116	160	1.005712e-06	4.022849e-06	5.548757e-06	-5.255804e+00	...	11	28779097	...	3.822219e-07
TCGA-A2-A0T1-01A-21D-A099-09	15	15	0	10	0	coding only	1	28835288	...	5	6	15	1.733986e-07	2.080784e-07	5.201959e-07	-6.283833e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A0T2-01A-11W-A097-09	34	32	2	24	5.882353e-02	coding only	1	28835288	...	8	14	34	2.774378e-07	4.855162e-07	1.179111e-06	-5.928445e+00	...	10	28779097	...	3.474744e-07
TCGA-A2-A0T3-01A-21D-A10Y-09	33	31	2	21	6.060606e-02	coding only	1	28835288	...	10	19	32	3.467973e-07	6.589149e-07	1.109751e-06	-5.954774e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A0T4-01A-31D-A099-09	31	30	1	23	3.225806e-02	coding only	1	28835288	...	7	18	30	2.427581e-07	6.242351e-07	1.040392e-06	-5.982803e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A0T5-01A-21D-A099-09	1418	1383	35	1054	2.468265e-02	coding only	1	28835288	...	325	1023	1387	1.127091e-05	3.547736e-05	4.810079e-05	-4.317848e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A0T6-01A-11D-A099-09	110	108	2	87	1.818182e-02	coding only	1	28835288	...	21	82	108	7.282743e-07	2.843738e-06	3.745411e-06	-5.426501e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A0T7-01A-21D-A099-09	23	22	1	17	4.347826e-02	coding only	1	28835288	...	4	10	21	1.387189e-07	3.467973e-07	7.282743e-07	-6.137705e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A0YC-01A-11D-A117-09	18	18	0	16	0	coding only	1	28835288	...	2	13	18	6.935946e-08	4.508365e-07	6.242351e-07	-6.204652e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A0YD-01A-11D-A10G-09	62	61	1	43	1.612903e-02	coding only	1	28835288	...	18	28	60	6.242351e-07	9.710324e-07	2.080784e-06	-5.681773e+00	...	13	28779097	...	4.517167e-07
TCGA-A2-A0YE-01A-11D-A10G-09	42	40	2	29	4.761905e-02	coding only	1	28835288	...	11	25	40	3.814770e-07	8.669932e-07	1.387189e-06	-5.857864e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A0YF-01A-21D-A10G-09	25	25	0	15	0	coding only	1	28835288	...	9	10	24	3.121176e-07	3.467973e-07	8.323135e-07	-6.079713e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A0YG-01A-21D-A10G-09	47	47	0	35	0	coding only	1	28835288	...	11	34	45	3.814770e-07	1.179111e-06	1.560588e-06	-5.806712e+00	...	0	28779097	...	0
TCGA-A2-A0YH-01A-11D-A10G-09	59	59	0	47	0	coding only	1	28835288	...	12	42	59	4.161568e-07	1.456549e-06	2.046104e-06	-5.689072e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A0YI-01A-31D-A10M-09	13	13	0	9	0	coding only	1	28835288	...	4	8	13	1.387189e-07	2.774378e-07	4.508365e-07	-6.345981e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A0YJ-01A-11D-A10G-09	54	53	1	46	1.851852e-02	coding only	1	28835288	...	6	45	53	2.080784e-07	1.560588e-06	1.838026e-06	-5.735648e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A0YK-01A-22D-A117-09	190	187	3	134	1.578947e-02	coding only	1	28835288	...	53	131	187	1.838026e-06	4.543045e-06	6.485109e-06	-5.188083e+00	...	0	28779097	...	0
TCGA-A2-A0YL-01A-21D-A10G-09	13	13	0	8	0	coding only	1	28835288	...	5	8	13	1.733986e-07	2.774378e-07	4.508365e-07	-6.345981e+00	...	0	28779097	...	0
TCGA-A2-A0YM-01A-11D-A10G-09	70	67	3	50	4.285714e-02	coding only	1	28835288	...	17	46	69	5.895554e-07	1.595268e-06	2.392901e-06	-5.621075e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A0YT-01A-11D-A10G-09	50	49	1	40	2.000000e-02	coding only	1	28835288	...	8	39	49	2.774378e-07	1.352509e-06	1.699307e-06	-5.769728e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A1FV-01A-11D-A13L-09	39	37	2	31	5.128205e-02	coding only	1	28835288	...	5	26	38	1.733986e-07	9.016730e-07	1.317830e-06	-5.880141e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A1FW-01A-11D-A13L-09	64	63	1	40	1.562500e-02	coding only	1	28835288	...	23	39	64	7.976338e-07	1.352509e-06	2.219503e-06	-5.653744e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A1FX-01A-11D-A13L-09	20	19	1	16	5.000000e-02	coding only	1	28835288	...	3	16	20	1.040392e-07	5.548757e-07	6.935946e-07	-6.158894e+00	...	0	28779097	...	0
TCGA-A2-A1FZ-01A-51D-A17G-09	28	28	0	23	0	coding only	1	28835288	...	5	16	26	1.733986e-07	5.548757e-07	9.016730e-07	-6.044951e+00	...	5	28779097	...	1.737372e-07
TCGA-A2-A1G0-01A-11D-A13L-09	20	20	0	18	0	coding only	1	28835288	...	2	16	20	6.935946e-08	5.548757e-07	6.935946e-07	-6.158894e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A1G1-01A-21D-A13L-09	29	29	0	20	0	coding only	1	28835288	...	9	16	28	3.121176e-07	5.548757e-07	9.710324e-07	-6.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A1G4-01A-11D-A13L-09	35	35	0	25	0	coding only	1	28835288	...	10	22	35	3.467973e-07	7.629541e-07	1.213791e-06	-5.915856e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A1G6-01A-11D-A13L-09	4	4	0	4	0	coding only	1	28835288	...	0	3	4	0	1.040392e-07	1.387189e-07	-6.857864e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A259-01A-11D-A16D-09	13	13	0	11	0	coding only	1	28835288	...	2	10	12	6.935946e-08	3.467973e-07	4.161568e-07	-6.380743e+00	...	0	28779097	...	0
TCGA-A2-A25A-01A-12D-A16D-09	98	96	2	78	2.040816e-02	coding only	1	28835288	...	18	76	98	6.242351e-07	2.635659e-06	3.398614e-06	-5.468698e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A25B-01A-11D-A167-09	83	81	2	59	2.409639e-02	coding only	1	28835288	...	22	51	82	7.629541e-07	1.768666e-06	2.843738e-06	-5.546110e+00	...	7	28779097	...	2.432321e-07
TCGA-A2-A25C-01A-11D-A167-09	23	22	1	18	4.347826e-02	coding only	1	28835288	...	4	18	23	1.387189e-07	6.242351e-07	7.976338e-07	-6.098196e+00	...	0	28779097	...	0
TCGA-A2-A25D-01A-12D-A16D-09	55	55	0	40	0	coding only	1	28835288	...	15	33	54	5.201959e-07	1.144431e-06	1.872705e-06	-5.727531e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A25E-01A-11D-A167-09	54	54	0	46	0	coding only	1	28835288	...	8	38	53	2.774378e-07	1.317830e-06	1.838026e-06	-5.735648e+00	...	7	28779097	...	2.432321e-07
TCGA-A2-A25F-01A-11D-A167-09	3	3	0	0	0	coding only	1	28835288	...	3	0	3	1.040392e-07	0	1.040392e-07	-6.982803e+00	...	0	28779097	...	0
TCGA-A2-A3KC-01A-11D-A20S-09	24	23	1	20	4.166667e-02	coding only	1	28835288	...	3	12	23	1.040392e-07	4.161568e-07	7.976338e-07	-6.098196e+00	...	7	28779097	...	2.432321e-07
TCGA-A2-A3KD-01A-12D-A20S-09	9	9	0	5	0	coding only	1	28835288	...	4	5	9	1.387189e-07	1.733986e-07	3.121176e-07	-6.505682e+00	...	0	28779097	...	0
TCGA-A2-A3XS-01A-11D-A22X-09	23	23	0	19	0	coding only	1	28835288	...	4	17	23	1.387189e-07	5.895554e-07	7.976338e-07	-6.098196e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A3XT-01A-11D-A22X-09	78	77	1	63	1.282051e-02	coding only	1	28835288	...	14	60	75	4.855162e-07	2.080784e-06	2.600980e-06	-5.584863e+00	...	0	28779097	...	0
TCGA-A2-A3XU-01A-12D-A22X-09	22	22	0	17	0	coding only	1	28835288	...	5	14	21	1.733986e-07	4.855162e-07	7.282743e-07	-6.137705e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A3XV-01A-21D-A23C-09	44	41	3	35	6.818182e-02	coding only	1	28835288	...	6	31	44	2.080784e-07	1.075072e-06	1.525908e-06	-5.816472e+00	...	4	28779097	...	1.389898e-07
TCGA-A2-A3XW-01A-11D-A23C-09	6	6	0	3	0	coding only	1	28835288	...	3	2	5	1.040392e-07	6.935946e-08	1.733986e-07	-6.760954e+00	...	0	28779097	...	0
TCGA-A2-A3XX-01A-21D-A23C-09	32	32	0	28	0	coding only	1	28835288	...	3	24	29	1.040392e-07	8.323135e-07	1.005712e-06	-5.997526e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A3XY-01A-11D-A23C-09	42	42	0	31	0	coding only	1	28835288	...	11	29	42	3.814770e-07	1.005712e-06	1.456549e-06	-5.836675e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A3XZ-01A-42D-A23C-09	41	41	0	32	0	coding only	1	28835288	...	9	29	40	3.121176e-07	1.005712e-06	1.387189e-06	-5.857864e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A3Y0-01A-11D-A23C-09	166	165	1	129	6.024096e-03	coding only	1	28835288	...	36	120	163	1.248470e-06	4.161568e-06	5.652796e-06	-5.247737e+00	...	6	28779097	...	2.084847e-07
TCGA-A2-A4RW-01A-21D-A25Q-09	112	107	5	86	4.464286e-02	exome+100bp flanks	2	35791301	...	21	83	111	5.867347e-07	2.318999e-06	3.101312e-06	-5.508455e+00	...	2	32078719	...	6.234663e-08
TCGA-A2-A4RX-01A-11D-A25Q-09	16	16	0	10	0	coding only	1	28835288	...	6	9	16	2.080784e-07	3.121176e-07	5.548757e-07	-6.255804e+00	...	1	28779097	...	3.474744e-08
TCGA-A2-A4RY-01A-31D-A25Q-09	11	11	0	9	0	coding only	1	28835288	...	2	9	11	6.935946e-08	3.121176e-07	3.814770e-07	-6.418532e+00	...	0	28779097	...	0
TCGA-A2-A4S0-01A-21D-A25Q-09	10	10	0	6	0	coding only	1	28835288	...	4	4	10	1.387189e-07	1.387189e-07	3.467973e-07	-6.459924e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A4S1-01A-21D-A25Q-09	65	65	0	59	0	coding only	1	28835288	...	6	54	62	2.080784e-07	1.872705e-06	2.150143e-06	-5.667533e+00	...	2	28779097	...	6.949488e-08
TCGA-A2-A4S2-01A-12D-A25Q-09	40	39	1	30	2.500000e-02	coding only	1	28835288	...	8	26	38	2.774378e-07	9.016730e-07	1.317830e-06	-5.880141e+00	...	3	28779097	...	1.042423e-07
TCGA-A2-A4S3-01A-21D-A25Q-09	74	70	4	49	5.405405e-02	coding only	1	28835288	...	21	46	72	7.282743e-07	1.595268e-06	2.496941e-06	-5.602592e+00	...	1	28779097	...	3.474744e-08
TCGA-A7-A0CD-01A-11W-A019-09	31	31	0	23	0	coding only	1	28835288	...	8	16	31	2.774378e-07	5.548757e-07	1.075072e-06	-5.968563e+00	...	7	28779097	...	2.432321e-07
TCGA-A7-A0CE-01A-11W-A019-09	110	105	5	85	4.545455e-02	exome+100bp flanks	2	35791301	...	20	68	110	5.587950e-07	1.899903e-06	3.073372e-06	-5.512385e+00	...	17	32078719	...	5.299463e-07
TCGA-A7-A0CG-01A-11W-A019-09	32	30	2	26	6.250000e-02	coding only	1	28835288	...	4	18	32	1.387189e-07	6.242351e-07	1.109751e-06	-5.954774e+00	...	8	28779097	...	2.779795e-07
TCGA-A7-A0CH-01A-21W-A019-09	27	27	0	24	0	coding only	1	28835288	...	3	19	27	1.040392e-07	6.589149e-07	9.363527e-07	-6.028561e+00	...	5	28779097	...	1.737372e-07
TCGA-A7-A0CJ-01A-21W-A019-09	44	43	1	34	2.272727e-02	coding only	1	28835288	...	9	28	44	3.121176e-07	9.710324e-07	1.525908e-06	-5.816472e+00	...	6	28779097	...	2.084847e-07
TCGA-A7-A0D9-01A-31W-A071-09	23	23	0	19	0	coding only	1	28835288	...	4	15	23	1.387189e-07	5.201959e-07	7.976338e-07	-6.098196e+00	...	4	28779097	...	1.389898e-07
TCGA-A7-A0DA-01A-31D-A10Y-09	124	119	5	102	4.032258e-02	exome+100bp flanks	2	35791301	...	17	96	124	4.749757e-07	2.682216e-06	3.464529e-06	-5.460356e+00	...	6	32078719	...	1.870399e-07
TCGA-A7-A0DB-01A-11D-A272-09	37	36	1	25	2.702703e-02	coding only	1	28835288	...	11	23	37	3.814770e-07	7.976338e-07	1.283150e-06	-5.891723e+00	...	2	28779097	...	6.949488e-08
TCGA-A7-A0DC-01B-04D-A22N-09	1	1	0	1	0	coding only	1	28835288	...	0	1	1	0	3.467973e-08	3.467973e-08	-7.459924e+00	...	0	28779097	...	0
TCGA-A7-A13D-01A-13D-A272-09	96	91	5	71	5.208333e-02	coding only	1	28835288	...	18	62	91	6.242351e-07	2.150143e-06	3.155855e-06	-5.500883e+00	...	6	28779097	...	2.084847e-07
TCGA-A7-A13E-01A-11D-A272-09	61	60	1	44	1.639344e-02	coding only	1	28835288	...	16	37	59	5.548757e-07	1.283150e-06	2.046104e-06	-5.689072e+00	...	5	28779097	...	1.737372e-07
TCGA-A7-A13F-01A-11D-A12Q-09	31	31	0	28	0	coding only	1	28835288	...	3	25	30	1.040392e-07	8.669932e-07	1.040392e-06	-5.982803e+00	...	2	28779097	...	6.949488e-08
TCGA-A7-A13G-01A-11D-A13L-09	24	24	0	16	0	coding only	1	28835288	...	8	14	24	2.774378e-07	4.855162e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-A7-A13H-01A-11D-A228-09	18	18	0	16	0	coding only	1	28835288	...	2	14	18	6.935946e-08	4.855162e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-A7-A26E-01A-11D-A167-09	39	38	1	28	2.564103e-02	coding only	1	28835288	...	9	23	37	3.121176e-07	7.976338e-07	1.283150e-06	-5.891723e+00	...	4	28779097	...	1.389898e-07
TCGA-A7-A26F-01A-21D-A167-09	33	32	1	24	3.030303e-02	coding only	1	28835288	...	8	21	33	2.774378e-07	7.282743e-07	1.144431e-06	-5.941410e+00	...	3	28779097	...	1.042423e-07
TCGA-A7-A26G-01A-21D-A167-09	49	47	2	32	4.081633e-02	coding only	1	28835288	...	15	30	49	5.201959e-07	1.040392e-06	1.699307e-06	-5.769728e+00	...	2	28779097	...	6.949488e-08
TCGA-A7-A26H-01A-11D-A167-09	97	95	2	70	2.061856e-02	coding only	1	28835288	...	25	69	97	8.669932e-07	2.392901e-06	3.363934e-06	-5.473153e+00	...	1	28779097	...	3.474744e-08
TCGA-A7-A26I-01A-11D-A167-09	31	30	1	26	3.225806e-02	coding only	1	28835288	...	4	24	30	1.387189e-07	8.323135e-07	1.040392e-06	-5.982803e+00	...	1	28779097	...	3.474744e-08
TCGA-A7-A26I-01B-06D-A22N-09	1	1	0	1	0	coding only	1	28835288	...	0	1	1	0	3.467973e-08	3.467973e-08	-7.459924e+00	...	0	28779097	...	0
TCGA-A7-A26J-01A-11D-A167-09	21	21	0	16	0	coding only	1	28835288	...	5	16	21	1.733986e-07	5.548757e-07	7.282743e-07	-6.137705e+00	...	0	28779097	...	0
TCGA-A7-A2KD-01A-31D-A21Q-09	35	35	0	27	0	coding only	1	28835288	...	8	25	35	2.774378e-07	8.669932e-07	1.213791e-06	-5.915856e+00	...	2	28779097	...	6.949488e-08
TCGA-A7-A3IY-01A-21D-A21Q-09	15	15	0	10	0	coding only	1	28835288	...	5	9	15	1.733986e-07	3.121176e-07	5.201959e-07	-6.283833e+00	...	1	28779097	...	3.474744e-08
TCGA-A7-A3IZ-01A-11D-A20S-09	83	81	2	58	2.409639e-02	coding only	1	28835288	...	20	54	77	6.935946e-07	1.872705e-06	2.670339e-06	-5.573434e+00	...	1	28779097	...	3.474744e-08
TCGA-A7-A3J0-01A-11D-A20S-09	32	32	0	18	0	coding only	1	28835288	...	14	15	30	4.855162e-07	5.201959e-07	1.040392e-06	-5.982803e+00	...	1	28779097	...	3.474744e-08
TCGA-A7-A3J1-01A-11D-A20S-09	25	23	2	17	8.000000e-02	coding only	1	28835288	...	5	15	24	1.733986e-07	5.201959e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-A7-A3RF-01A-11D-A228-09	62	60	2	45	3.225806e-02	coding only	1	28835288	...	15	37	61	5.201959e-07	1.283150e-06	2.115464e-06	-5.674594e+00	...	7	28779097	...	2.432321e-07
TCGA-A7-A425-01A-11D-A243-09	36	35	1	32	2.777778e-02	coding only	1	28835288	...	3	28	33	1.040392e-07	9.710324e-07	1.144431e-06	-5.941410e+00	...	1	28779097	...	3.474744e-08
TCGA-A7-A426-01A-22D-A243-09	33	32	1	25	3.030303e-02	coding only	1	28835288	...	7	23	33	2.427581e-07	7.976338e-07	1.144431e-06	-5.941410e+00	...	2	28779097	...	6.949488e-08
TCGA-A7-A4SA-01A-11D-A25Q-09	69	66	3	45	4.347826e-02	coding only	1	28835288	...	20	44	68	6.935946e-07	1.525908e-06	2.358222e-06	-5.627415e+00	...	1	28779097	...	3.474744e-08
TCGA-A7-A4SB-01A-21D-A25Q-09	32	32	0	28	0	coding only	1	28835288	...	4	24	31	1.387189e-07	8.323135e-07	1.075072e-06	-5.968563e+00	...	3	28779097	...	1.042423e-07
TCGA-A7-A4SC-01A-12D-A25Q-09	37	37	0	30	0	coding only	1	28835288	...	7	25	36	2.427581e-07	8.669932e-07	1.248470e-06	-5.903622e+00	...	4	28779097	...	1.389898e-07
TCGA-A7-A4SD-01A-11D-A25Q-09	49	48	1	38	2.040816e-02	coding only	1	28835288	...	10	31	46	3.467973e-07	1.075072e-06	1.595268e-06	-5.797166e+00	...	4	28779097	...	1.389898e-07
TCGA-A7-A4SE-01A-11D-A25Q-09	87	85	2	70	2.298851e-02	coding only	1	28835288	...	14	64	83	4.855162e-07	2.219503e-06	2.878418e-06	-5.540846e+00	...	3	28779097	...	1.042423e-07
TCGA-A7-A4SF-01A-11D-A25Q-09	71	70	1	49	1.408451e-02	coding only	1	28835288	...	20	47	70	6.935946e-07	1.629947e-06	2.427581e-06	-5.614826e+00	...	2	28779097	...	6.949488e-08
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TCGA-A8-A06X-01A-21W-A019-09	188	185	3	140	1.595745e-02	coding only	1	28835288	...	45	121	188	1.560588e-06	4.196247e-06	6.519789e-06	-5.185766e+00	...	19	28779097	...	6.602014e-07
TCGA-A8-A06Y-01A-21W-A019-09	30	30	0	24	0	coding only	1	28835288	...	6	21	30	2.080784e-07	7.282743e-07	1.040392e-06	-5.982803e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A06Z-01A-11W-A019-09	57	56	1	43	1.754386e-02	coding only	1	28835288	...	13	38	57	4.508365e-07	1.317830e-06	1.976745e-06	-5.704049e+00	...	5	28779097	...	1.737372e-07
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TCGA-A8-A079-01A-21W-A019-09	47	47	0	36	0	coding only	1	28835288	...	11	30	46	3.814770e-07	1.040392e-06	1.595268e-06	-5.797166e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A07B-01A-11W-A019-09	62	62	0	47	0	coding only	1	28835288	...	15	38	62	5.201959e-07	1.317830e-06	2.150143e-06	-5.667533e+00	...	9	28779097	...	3.127270e-07
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TCGA-A8-A07E-01A-11W-A050-09	73	73	0	65	0	coding only	1	28835288	...	7	43	72	2.427581e-07	1.491228e-06	2.496941e-06	-5.602592e+00	...	22	28779097	...	7.644437e-07
TCGA-A8-A07F-01A-11W-A019-09	29	29	0	23	0	coding only	1	28835288	...	6	18	29	2.080784e-07	6.242351e-07	1.005712e-06	-5.997526e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A07G-01A-11W-A050-09	49	48	1	39	2.040816e-02	coding only	1	28835288	...	9	31	49	3.121176e-07	1.075072e-06	1.699307e-06	-5.769728e+00	...	8	28779097	...	2.779795e-07
TCGA-A8-A07I-01A-11W-A019-09	38	37	1	29	2.631579e-02	coding only	1	28835288	...	8	26	38	2.774378e-07	9.016730e-07	1.317830e-06	-5.880141e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A07J-01A-11W-A019-09	40	39	1	28	2.500000e-02	coding only	1	28835288	...	11	13	40	3.814770e-07	4.508365e-07	1.387189e-06	-5.857864e+00	...	15	28779097	...	5.212116e-07
TCGA-A8-A07L-01A-11W-A019-09	89	88	1	70	1.123596e-02	coding only	1	28835288	...	18	64	89	6.242351e-07	2.219503e-06	3.086496e-06	-5.510534e+00	...	6	28779097	...	2.084847e-07
TCGA-A8-A07O-01A-11W-A019-09	41	41	0	32	0	coding only	1	28835288	...	9	29	41	3.121176e-07	1.005712e-06	1.421869e-06	-5.847140e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A07P-01A-11W-A019-09	49	49	0	37	0	coding only	1	28835288	...	12	29	49	4.161568e-07	1.005712e-06	1.699307e-06	-5.769728e+00	...	8	28779097	...	2.779795e-07
TCGA-A8-A07R-01A-21W-A050-09	416	407	9	341	2.163462e-02	coding only	1	28835288	...	66	268	407	2.288862e-06	9.294168e-06	1.411465e-05	-4.850330e+00	...	64	28779097	...	2.223836e-06
TCGA-A8-A07U-01A-11W-A050-09	37	37	0	28	0	coding only	1	28835288	...	9	13	37	3.121176e-07	4.508365e-07	1.283150e-06	-5.891723e+00	...	15	28779097	...	5.212116e-07
TCGA-A8-A07W-01A-11W-A019-09	78	78	0	59	0	coding only	1	28835288	...	19	55	78	6.589149e-07	1.907385e-06	2.705019e-06	-5.567830e+00	...	4	28779097	...	1.389898e-07
TCGA-A8-A07Z-01A-11W-A019-09	23	22	1	17	4.347826e-02	coding only	1	28835288	...	5	13	23	1.733986e-07	4.508365e-07	7.976338e-07	-6.098196e+00	...	4	28779097	...	1.389898e-07
TCGA-A8-A081-01A-11W-A019-09	75	75	0	61	0	coding only	1	28835288	...	14	58	75	4.855162e-07	2.011424e-06	2.600980e-06	-5.584863e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A082-01A-11W-A019-09	22	22	0	17	0	coding only	1	28835288	...	5	11	22	1.733986e-07	3.814770e-07	7.629541e-07	-6.117502e+00	...	6	28779097	...	2.084847e-07
TCGA-A8-A083-01A-21W-A019-09	27	27	0	27	0	coding only	1	28835288	...	0	22	27	0	7.629541e-07	9.363527e-07	-6.028561e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A084-01A-21W-A019-09	63	62	1	54	1.587302e-02	coding only	1	28835288	...	8	48	63	2.774378e-07	1.664627e-06	2.184823e-06	-5.660584e+00	...	6	28779097	...	2.084847e-07
TCGA-A8-A085-01A-11W-A019-09	66	64	2	50	3.030303e-02	coding only	1	28835288	...	14	46	66	4.855162e-07	1.595268e-06	2.288862e-06	-5.640380e+00	...	4	28779097	...	1.389898e-07
TCGA-A8-A086-01A-11W-A019-09	23	21	2	15	8.695652e-02	coding only	1	28835288	...	6	10	23	2.080784e-07	3.467973e-07	7.976338e-07	-6.098196e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A08A-01A-11W-A019-09	31	31	0	25	0	coding only	1	28835288	...	6	16	31	2.080784e-07	5.548757e-07	1.075072e-06	-5.968563e+00	...	9	28779097	...	3.127270e-07
TCGA-A8-A08B-01A-11W-A019-09	29	29	0	17	0	coding only	1	28835288	...	12	14	29	4.161568e-07	4.855162e-07	1.005712e-06	-5.997526e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A08C-01A-11W-A019-09	1	1	0	1	0	coding only	1	28835288	...	0	0	1	0	0	3.467973e-08	-7.459924e+00	...	1	28779097	...	3.474744e-08
TCGA-A8-A08F-01A-11W-A019-09	108	108	0	85	0	coding only	1	28835288	...	23	76	108	7.976338e-07	2.635659e-06	3.745411e-06	-5.426501e+00	...	9	28779097	...	3.127270e-07
TCGA-A8-A08G-01A-11W-A019-09	33	33	0	26	0	coding only	1	28835288	...	7	23	33	2.427581e-07	7.976338e-07	1.144431e-06	-5.941410e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A08H-01A-21W-A019-09	51	49	2	42	3.921569e-02	coding only	1	28835288	...	7	22	51	2.427581e-07	7.629541e-07	1.768666e-06	-5.752354e+00	...	20	28779097	...	6.949488e-07
TCGA-A8-A08I-01A-11W-A019-09	38	37	1	29	2.631579e-02	coding only	1	28835288	...	8	22	38	2.774378e-07	7.629541e-07	1.317830e-06	-5.880141e+00	...	7	28779097	...	2.432321e-07
TCGA-A8-A08J-01A-11W-A019-09	26	26	0	24	0	coding only	1	28835288	...	2	19	26	6.935946e-08	6.589149e-07	9.016730e-07	-6.044951e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A08L-01A-11W-A019-09	200	200	0	157	0	coding only	1	28835288	...	43	150	200	1.491228e-06	5.201959e-06	6.935946e-06	-5.158894e+00	...	7	28779097	...	2.432321e-07
TCGA-A8-A08O-01A-21W-A071-09	24	24	0	19	0	coding only	1	28835288	...	5	17	24	1.733986e-07	5.895554e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-A8-A08P-01A-11W-A019-09	38	38	0	32	0	coding only	1	28835288	...	6	27	38	2.080784e-07	9.363527e-07	1.317830e-06	-5.880141e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A08R-01A-11W-A050-09	163	163	0	123	0	coding only	1	28835288	...	40	111	159	1.387189e-06	3.849450e-06	5.514077e-06	-5.258527e+00	...	8	28779097	...	2.779795e-07
TCGA-A8-A08S-01A-11W-A050-09	50	49	1	38	2.000000e-02	coding only	1	28835288	...	11	25	49	3.814770e-07	8.669932e-07	1.699307e-06	-5.769728e+00	...	12	28779097	...	4.169693e-07
TCGA-A8-A08T-01A-21W-A019-09	47	47	0	38	0	coding only	1	28835288	...	9	28	47	3.121176e-07	9.710324e-07	1.629947e-06	-5.787826e+00	...	10	28779097	...	3.474744e-07
TCGA-A8-A08X-01A-21W-A019-09	17	17	0	13	0	coding only	1	28835288	...	4	10	17	1.387189e-07	3.467973e-07	5.895554e-07	-6.229475e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A08Z-01A-21W-A019-09	30	30	0	22	0	coding only	1	28835288	...	8	19	30	2.774378e-07	6.589149e-07	1.040392e-06	-5.982803e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A090-01A-11W-A019-09	35	35	0	26	0	coding only	1	28835288	...	9	22	35	3.121176e-07	7.629541e-07	1.213791e-06	-5.915856e+00	...	4	28779097	...	1.389898e-07
TCGA-A8-A091-01A-11W-A019-09	24	24	0	17	0	coding only	1	28835288	...	7	9	24	2.427581e-07	3.121176e-07	8.323135e-07	-6.079713e+00	...	8	28779097	...	2.779795e-07
TCGA-A8-A092-01A-11W-A019-09	80	77	3	63	3.750000e-02	coding only	1	28835288	...	14	55	80	4.855162e-07	1.907385e-06	2.774378e-06	-5.556834e+00	...	8	28779097	...	2.779795e-07
TCGA-A8-A093-01A-11W-A019-09	98	97	1	73	1.020408e-02	coding only	1	28835288	...	24	67	98	8.323135e-07	2.323542e-06	3.398614e-06	-5.468698e+00	...	6	28779097	...	2.084847e-07
TCGA-A8-A094-01A-11W-A019-09	171	171	0	136	0	coding only	1	28835288	...	35	127	171	1.213791e-06	4.404326e-06	5.930234e-06	-5.226928e+00	...	9	28779097	...	3.127270e-07
TCGA-A8-A095-01A-11W-A019-09	117	116	1	87	8.547009e-03	coding only	1	28835288	...	29	80	117	1.005712e-06	2.774378e-06	4.057528e-06	-5.391738e+00	...	7	28779097	...	2.432321e-07
TCGA-A8-A096-01A-11W-A019-09	27	27	0	25	0	coding only	1	28835288	...	2	20	26	6.935946e-08	6.935946e-07	9.016730e-07	-6.044951e+00	...	4	28779097	...	1.389898e-07
TCGA-A8-A097-01A-11W-A050-09	101	99	2	73	1.980198e-02	coding only	1	28835288	...	25	56	97	8.669932e-07	1.942065e-06	3.363934e-06	-5.473153e+00	...	14	28779097	...	4.864642e-07
TCGA-A8-A099-01A-11W-A019-09	21	21	0	18	0	coding only	1	28835288	...	3	18	21	1.040392e-07	6.242351e-07	7.282743e-07	-6.137705e+00	...	0	28779097	...	0
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TCGA-A8-A09B-01A-11W-A019-09	37	34	3	27	8.108108e-02	coding only	1	28835288	...	7	22	37	2.427581e-07	7.629541e-07	1.283150e-06	-5.891723e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A09C-01A-11W-A019-09	29	28	1	18	3.448276e-02	coding only	1	28835288	...	10	12	29	3.467973e-07	4.161568e-07	1.005712e-06	-5.997526e+00	...	6	28779097	...	2.084847e-07
TCGA-A8-A09D-01A-11W-A019-09	41	38	3	25	7.317073e-02	coding only	1	28835288	...	13	17	41	4.508365e-07	5.895554e-07	1.421869e-06	-5.847140e+00	...	8	28779097	...	2.779795e-07
TCGA-A8-A09E-01A-11W-A019-09	44	42	2	38	4.545455e-02	coding only	1	28835288	...	4	25	44	1.387189e-07	8.669932e-07	1.525908e-06	-5.816472e+00	...	13	28779097	...	4.517167e-07
TCGA-A8-A09G-01A-21W-A019-09	233	232	1	187	4.291845e-03	coding only	1	28835288	...	45	178	233	1.560588e-06	6.172992e-06	8.080377e-06	-5.092568e+00	...	9	28779097	...	3.127270e-07
TCGA-A8-A09I-01A-22W-A050-09	123	122	1	95	8.130081e-03	coding only	1	28835288	...	27	87	120	9.363527e-07	3.017137e-06	4.161568e-06	-5.380743e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A09K-01A-11W-A019-09	35	34	1	27	2.857143e-02	coding only	1	28835288	...	7	22	35	2.427581e-07	7.629541e-07	1.213791e-06	-5.915856e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A09M-01A-11W-A019-09	90	89	1	66	1.111111e-02	coding only	1	28835288	...	23	60	90	7.976338e-07	2.080784e-06	3.121176e-06	-5.505682e+00	...	6	28779097	...	2.084847e-07
TCGA-A8-A09N-01A-11W-A019-09	74	71	3	46	4.054054e-02	coding only	1	28835288	...	25	43	74	8.669932e-07	1.491228e-06	2.566300e-06	-5.590693e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A09Q-01A-11W-A019-09	95	95	0	74	0	coding only	1	28835288	...	21	71	95	7.282743e-07	2.462261e-06	3.294574e-06	-5.482201e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A09R-01A-11W-A019-09	48	48	0	41	0	coding only	1	28835288	...	7	31	48	2.427581e-07	1.075072e-06	1.664627e-06	-5.778683e+00	...	10	28779097	...	3.474744e-07
TCGA-A8-A09T-01A-11W-A019-09	21	21	0	20	0	coding only	1	28835288	...	1	15	21	3.467973e-08	5.201959e-07	7.282743e-07	-6.137705e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A09V-01A-11D-A045-09	23	22	1	19	4.347826e-02	coding only	1	28835288	...	3	10	22	1.040392e-07	3.467973e-07	7.629541e-07	-6.117502e+00	...	8	28779097	...	2.779795e-07
TCGA-A8-A09W-01A-11W-A019-09	78	76	2	61	2.564103e-02	coding only	1	28835288	...	15	48	77	5.201959e-07	1.664627e-06	2.670339e-06	-5.573434e+00	...	12	28779097	...	4.169693e-07
TCGA-A8-A09X-01A-11W-A019-09	54	54	0	43	0	coding only	1	28835288	...	11	36	54	3.814770e-07	1.248470e-06	1.872705e-06	-5.727531e+00	...	7	28779097	...	2.432321e-07
TCGA-A8-A09Z-01A-11W-A019-09	1254	1231	23	962	1.834131e-02	coding only	1	28835288	...	269	784	1251	9.328847e-06	2.718891e-05	4.338434e-05	-4.362667e+00	...	175	28779097	...	6.080802e-06
TCGA-A8-A0A1-01A-11W-A019-09	36	35	1	30	2.777778e-02	coding only	1	28835288	...	5	21	36	1.733986e-07	7.282743e-07	1.248470e-06	-5.903622e+00	...	8	28779097	...	2.779795e-07
TCGA-A8-A0A2-01A-11W-A050-09	33	32	1	22	3.030303e-02	coding only	1	28835288	...	10	17	33	3.467973e-07	5.895554e-07	1.144431e-06	-5.941410e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A0A4-01A-11W-A019-09	31	31	0	24	0	coding only	1	28835288	...	7	9	31	2.427581e-07	3.121176e-07	1.075072e-06	-5.968563e+00	...	15	28779097	...	5.212116e-07
TCGA-A8-A0A6-01A-12W-A071-09	2980	2931	49	2040	1.644295e-02	coding only	1	28835288	...	891	2034	2979	3.089964e-05	7.053857e-05	1.033109e-04	-3.985854e+00	...	5	28779097	...	1.737372e-07
TCGA-A8-A0A7-01A-11W-A019-09	88	87	1	69	1.136364e-02	coding only	1	28835288	...	18	65	88	6.242351e-07	2.254182e-06	3.051816e-06	-5.515442e+00	...	4	28779097	...	1.389898e-07
TCGA-A8-A0A9-01A-11W-A019-09	43	43	0	37	0	coding only	1	28835288	...	6	34	43	2.080784e-07	1.179111e-06	1.491228e-06	-5.826456e+00	...	3	28779097	...	1.042423e-07
TCGA-A8-A0AB-01A-11W-A050-09	23	22	1	18	4.347826e-02	coding only	1	28835288	...	4	12	23	1.387189e-07	4.161568e-07	7.976338e-07	-6.098196e+00	...	6	28779097	...	2.084847e-07
TCGA-A8-A0AD-01A-11W-A071-09	28	27	1	18	3.571429e-02	coding only	1	28835288	...	9	15	28	3.121176e-07	5.201959e-07	9.710324e-07	-6.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-AC-A23C-01A-12D-A167-09	95	94	1	76	1.052632e-02	coding only	1	28835288	...	18	69	95	6.242351e-07	2.392901e-06	3.294574e-06	-5.482201e+00	...	7	28779097	...	2.432321e-07
TCGA-AC-A23E-01A-11D-A159-09	18	18	0	15	0	coding only	1	28835288	...	3	13	18	1.040392e-07	4.508365e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-AC-A23G-01A-11D-A20S-09	28	27	1	19	3.571429e-02	coding only	1	28835288	...	8	18	27	2.774378e-07	6.242351e-07	9.363527e-07	-6.028561e+00	...	0	28779097	...	0
TCGA-AC-A23H-01A-11D-A159-09	4593	4492	101	3422	2.198998e-02	coding only	1	28835288	...	1051	3341	4509	3.644840e-05	1.158650e-04	1.563709e-04	-3.805844e+00	...	19	28779097	...	6.602014e-07
TCGA-AC-A2B8-01A-11D-A17D-09	96	96	0	72	0	coding only	1	28835288	...	24	67	95	8.323135e-07	2.323542e-06	3.294574e-06	-5.482201e+00	...	4	28779097	...	1.389898e-07
TCGA-AC-A2BK-01A-11D-A21Q-09	76	76	0	59	0	coding only	1	28835288	...	17	49	74	5.895554e-07	1.699307e-06	2.566300e-06	-5.590693e+00	...	8	28779097	...	2.779795e-07
TCGA-AC-A2BM-01A-11D-A21Q-09	19	19	0	16	0	coding only	1	28835288	...	3	16	19	1.040392e-07	5.548757e-07	6.589149e-07	-6.181171e+00	...	0	28779097	...	0
TCGA-AC-A2FB-01A-11D-A17D-09	16	15	1	12	6.250000e-02	coding only	1	28835288	...	3	10	16	1.040392e-07	3.467973e-07	5.548757e-07	-6.255804e+00	...	2	28779097	...	6.949488e-08
TCGA-AC-A2FE-01A-11D-A19Y-09	16	16	0	13	0	coding only	1	28835288	...	3	10	15	1.040392e-07	3.467973e-07	5.201959e-07	-6.283833e+00	...	2	28779097	...	6.949488e-08
TCGA-AC-A2FF-01A-11D-A17D-09	12	12	0	12	0	coding only	1	28835288	...	0	10	12	0	3.467973e-07	4.161568e-07	-6.380743e+00	...	2	28779097	...	6.949488e-08
TCGA-AC-A2FG-01A-11D-A17D-09	47	46	1	33	2.127660e-02	coding only	1	28835288	...	12	30	46	4.161568e-07	1.040392e-06	1.595268e-06	-5.797166e+00	...	3	28779097	...	1.042423e-07
TCGA-AC-A2FK-01A-12D-A17W-09	1	0	1	0	1	coding only	1	28835288	...	0	0	1	0	0	3.467973e-08	-7.459924e+00	...	0	28779097	...	0
TCGA-AC-A2FM-01A-11D-A19Y-09	41	41	0	31	0	coding only	1	28835288	...	10	26	39	3.467973e-07	9.016730e-07	1.352509e-06	-5.868860e+00	...	3	28779097	...	1.042423e-07
TCGA-AC-A2FO-01A-11D-A17W-09	24	24	0	21	0	coding only	1	28835288	...	3	19	24	1.040392e-07	6.589149e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-AC-A2QH-01A-11D-A18P-09	26	26	0	20	0	coding only	1	28835288	...	6	13	26	2.080784e-07	4.508365e-07	9.016730e-07	-6.044951e+00	...	7	28779097	...	2.432321e-07
TCGA-AC-A2QI-01A-12D-A19Y-09	72	71	1	53	1.388889e-02	coding only	1	28835288	...	18	50	72	6.242351e-07	1.733986e-06	2.496941e-06	-5.602592e+00	...	3	28779097	...	1.042423e-07
TCGA-AC-A2QJ-01A-12D-A19Y-09	21	21	0	20	0	coding only	1	28835288	...	1	16	19	3.467973e-08	5.548757e-07	6.589149e-07	-6.181171e+00	...	2	28779097	...	6.949488e-08
TCGA-AC-A3BB-01A-21D-A19Y-09	70	67	3	50	4.285714e-02	coding only	1	28835288	...	16	50	69	5.548757e-07	1.733986e-06	2.392901e-06	-5.621075e+00	...	0	28779097	...	0
TCGA-AC-A3EH-01A-22D-A228-09	48	43	5	32	1.041667e-01	coding only	1	28835288	...	10	29	44	3.467973e-07	1.005712e-06	1.525908e-06	-5.816472e+00	...	1	28779097	...	3.474744e-08
TCGA-AC-A3HN-01A-11D-A20S-09	15	15	0	10	0	coding only	1	28835288	...	5	10	15	1.733986e-07	3.467973e-07	5.201959e-07	-6.283833e+00	...	0	28779097	...	0
TCGA-AC-A3OD-01A-11D-A21Q-09	21	21	0	19	0	coding only	1	28835288	...	2	18	21	6.935946e-08	6.242351e-07	7.282743e-07	-6.137705e+00	...	1	28779097	...	3.474744e-08
TCGA-AC-A3QP-01A-11D-A22X-09	29	29	0	23	0	coding only	1	28835288	...	6	21	29	2.080784e-07	7.282743e-07	1.005712e-06	-5.997526e+00	...	2	28779097	...	6.949488e-08
TCGA-AC-A3TM-01A-11D-A228-09	31	31	0	27	0	coding only	1	28835288	...	4	23	31	1.387189e-07	7.976338e-07	1.075072e-06	-5.968563e+00	...	4	28779097	...	1.389898e-07
TCGA-AC-A3TN-01A-11D-A228-09	67	61	6	44	8.955224e-02	coding only	1	28835288	...	17	39	62	5.895554e-07	1.352509e-06	2.150143e-06	-5.667533e+00	...	1	28779097	...	3.474744e-08
TCGA-AC-A3W5-01A-11D-A228-09	125	121	4	97	3.200000e-02	coding only	1	28835288	...	24	91	121	8.323135e-07	3.155855e-06	4.196247e-06	-5.377139e+00	...	3	28779097	...	1.042423e-07
TCGA-AC-A3W6-01A-12D-A228-09	183	177	6	137	3.278689e-02	exome+100bp flanks	2	35791301	...	40	135	181	1.117590e-06	3.771866e-06	5.057095e-06	-5.296099e+00	...	0	32078719	...	0
TCGA-AC-A3W7-01A-11D-A228-09	75	71	4	50	5.333333e-02	coding only	1	28835288	...	21	43	73	7.282743e-07	1.491228e-06	2.531620e-06	-5.596601e+00	...	5	28779097	...	1.737372e-07
TCGA-AC-A3YI-01A-21D-A23C-09	14	14	0	12	0	coding only	1	28835288	...	2	11	14	6.935946e-08	3.814770e-07	4.855162e-07	-6.313796e+00	...	1	28779097	...	3.474744e-08
TCGA-AC-A3YJ-01A-11D-A22X-09	30	28	2	19	6.666667e-02	coding only	1	28835288	...	9	16	30	3.121176e-07	5.548757e-07	1.040392e-06	-5.982803e+00	...	3	28779097	...	1.042423e-07
TCGA-AC-A5EH-01A-11D-A28B-09	132	130	2	95	1.515152e-02	coding only	1	28835288	...	34	91	130	1.179111e-06	3.155855e-06	4.508365e-06	-5.345981e+00	...	3	28779097	...	1.042423e-07
TCGA-AC-A5EI-01A-11D-A27P-09	30	30	0	25	0	coding only	1	28835288	...	5	21	28	1.733986e-07	7.282743e-07	9.710324e-07	-6.012766e+00	...	2	28779097	...	6.949488e-08
TCGA-AC-A5XS-01A-11D-A29N-09	481	471	10	350	2.079002e-02	coding only	1	28835288	...	118	338	471	4.092208e-06	1.172175e-05	1.633415e-05	-4.786903e+00	...	5	28779097	...	1.737372e-07
TCGA-AC-A5XU-01A-11D-A28B-09	56	56	0	38	0	coding only	1	28835288	...	18	32	56	6.242351e-07	1.109751e-06	1.942065e-06	-5.711736e+00	...	6	28779097	...	2.084847e-07
TCGA-AC-A62X-01A-11D-A29N-09	57	55	2	45	3.508772e-02	coding only	1	28835288	...	10	38	53	3.467973e-07	1.317830e-06	1.838026e-06	-5.735648e+00	...	3	28779097	...	1.042423e-07
TCGA-AC-A62Y-01A-11D-A29N-09	63	61	2	48	3.174603e-02	coding only	1	28835288	...	13	42	60	4.508365e-07	1.456549e-06	2.080784e-06	-5.681773e+00	...	3	28779097	...	1.042423e-07
TCGA-AN-A03X-01A-21W-A019-09	40	40	0	34	0	coding only	1	28835288	...	6	16	40	2.080784e-07	5.548757e-07	1.387189e-06	-5.857864e+00	...	18	28779097	...	6.254540e-07
TCGA-AN-A03Y-01A-21W-A019-09	28	28	0	21	0	coding only	1	28835288	...	7	18	28	2.427581e-07	6.242351e-07	9.710324e-07	-6.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-AN-A041-01A-11W-A050-09	23	23	0	18	0	coding only	1	28835288	...	5	13	23	1.733986e-07	4.508365e-07	7.976338e-07	-6.098196e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A046-01A-21W-A050-09	5368	5271	97	4318	1.807004e-02	coding only	1	28835288	...	937	4224	5278	3.249491e-05	1.464872e-04	1.830396e-04	-3.737455e+00	...	26	28779097	...	9.034335e-07
TCGA-AN-A049-01A-21W-A019-09	34	34	0	28	0	coding only	1	28835288	...	6	20	34	2.080784e-07	6.935946e-07	1.179111e-06	-5.928445e+00	...	8	28779097	...	2.779795e-07
TCGA-AN-A04A-01A-21W-A050-09	27	27	0	19	0	coding only	1	28835288	...	7	15	26	2.427581e-07	5.201959e-07	9.016730e-07	-6.044951e+00	...	4	28779097	...	1.389898e-07
TCGA-AN-A04C-01A-21W-A050-09	68	66	2	52	2.941176e-02	coding only	1	28835288	...	14	37	68	4.855162e-07	1.283150e-06	2.358222e-06	-5.627415e+00	...	15	28779097	...	5.212116e-07
TCGA-AN-A04D-01A-21W-A050-09	91	90	1	66	1.098901e-02	coding only	1	28835288	...	24	60	91	8.323135e-07	2.080784e-06	3.155855e-06	-5.500883e+00	...	6	28779097	...	2.084847e-07
TCGA-AN-A0AJ-01A-11W-A019-09	73	73	0	54	0	coding only	1	28835288	...	19	48	73	6.589149e-07	1.664627e-06	2.531620e-06	-5.596601e+00	...	6	28779097	...	2.084847e-07
TCGA-AN-A0AK-01A-21W-A019-09	1140	1124	16	869	1.403509e-02	coding only	1	28835288	...	254	615	1137	8.808651e-06	2.132803e-05	3.943085e-05	-4.404164e+00	...	252	28779097	...	8.756355e-06
TCGA-AN-A0AL-01A-11W-A019-09	73	71	2	60	2.739726e-02	coding only	1	28835288	...	11	50	73	3.814770e-07	1.733986e-06	2.531620e-06	-5.596601e+00	...	10	28779097	...	3.474744e-07
TCGA-AN-A0AM-01A-11W-A050-09	48	48	0	37	0	coding only	1	28835288	...	10	33	47	3.467973e-07	1.144431e-06	1.629947e-06	-5.787826e+00	...	4	28779097	...	1.389898e-07
TCGA-AN-A0AR-01A-11W-A019-09	106	104	2	84	1.886792e-02	coding only	1	28835288	...	20	77	106	6.935946e-07	2.670339e-06	3.676051e-06	-5.434618e+00	...	7	28779097	...	2.432321e-07
TCGA-AN-A0AS-01A-11W-A019-09	38	38	0	35	0	coding only	1	28835288	...	3	24	38	1.040392e-07	8.323135e-07	1.317830e-06	-5.880141e+00	...	11	28779097	...	3.822219e-07
TCGA-AN-A0AT-01A-11D-A045-09	107	107	0	89	0	coding only	1	28835288	...	18	84	106	6.242351e-07	2.913097e-06	3.676051e-06	-5.434618e+00	...	4	28779097	...	1.389898e-07
TCGA-AN-A0FD-01A-11W-A050-09	40	39	1	32	2.500000e-02	coding only	1	28835288	...	7	24	40	2.427581e-07	8.323135e-07	1.387189e-06	-5.857864e+00	...	8	28779097	...	2.779795e-07
TCGA-AN-A0FF-01A-11W-A050-09	23	23	0	20	0	coding only	1	28835288	...	3	14	22	1.040392e-07	4.855162e-07	7.629541e-07	-6.117502e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A0FJ-01A-11W-A019-09	81	80	1	64	1.234568e-02	coding only	1	28835288	...	16	59	81	5.548757e-07	2.046104e-06	2.809058e-06	-5.551439e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A0FK-01A-11W-A050-09	45	43	2	27	4.444444e-02	coding only	1	28835288	...	16	21	44	5.548757e-07	7.282743e-07	1.525908e-06	-5.816472e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A0FL-01A-11W-A050-09	170	170	0	135	0	coding only	1	28835288	...	35	120	169	1.213791e-06	4.161568e-06	5.860874e-06	-5.232038e+00	...	14	28779097	...	4.864642e-07
TCGA-AN-A0FN-01A-11W-A050-09	26	25	1	23	3.846154e-02	coding only	1	28835288	...	2	8	24	6.935946e-08	2.774378e-07	8.323135e-07	-6.079713e+00	...	13	28779097	...	4.517167e-07
TCGA-AN-A0FS-01A-11W-A050-09	60	58	2	45	3.333333e-02	coding only	1	28835288	...	13	27	59	4.508365e-07	9.363527e-07	2.046104e-06	-5.689072e+00	...	17	28779097	...	5.907065e-07
TCGA-AN-A0FT-01A-11W-A050-09	95	92	3	65	3.157895e-02	coding only	1	28835288	...	27	57	95	9.363527e-07	1.976745e-06	3.294574e-06	-5.482201e+00	...	8	28779097	...	2.779795e-07
TCGA-AN-A0FV-01A-11W-A019-09	76	74	2	54	2.631579e-02	coding only	1	28835288	...	19	49	75	6.589149e-07	1.699307e-06	2.600980e-06	-5.584863e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A0FW-01A-11W-A050-09	92	90	2	70	2.173913e-02	coding only	1	28835288	...	18	62	87	6.242351e-07	2.150143e-06	3.017137e-06	-5.520405e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A0FX-01A-11W-A050-09	142	136	6	122	4.225352e-02	exome+100bp flanks	2	35791301	...	13	64	137	3.632167e-07	1.788144e-06	3.827746e-06	-5.417057e+00	...	54	32078719	...	1.683359e-06
TCGA-AN-A0FY-01A-11W-A050-09	48	47	1	43	2.083333e-02	coding only	1	28835288	...	4	36	48	1.387189e-07	1.248470e-06	1.664627e-06	-5.778683e+00	...	7	28779097	...	2.432321e-07
TCGA-AN-A0FZ-01A-11W-A050-09	44	44	0	36	0	coding only	1	28835288	...	8	33	44	2.774378e-07	1.144431e-06	1.525908e-06	-5.816472e+00	...	3	28779097	...	1.042423e-07
TCGA-AN-A0G0-01A-11W-A050-09	36	36	0	32	0	coding only	1	28835288	...	4	25	34	1.387189e-07	8.669932e-07	1.179111e-06	-5.928445e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A0XL-01A-11D-A10M-09	28	26	2	21	7.142857e-02	coding only	1	28835288	...	5	18	28	1.733986e-07	6.242351e-07	9.710324e-07	-6.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-AN-A0XN-01A-21D-A10G-09	117	117	0	91	0	coding only	1	28835288	...	25	85	115	8.669932e-07	2.947777e-06	3.988169e-06	-5.399226e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A0XO-01A-11D-A10G-09	24	24	0	19	0	coding only	1	28835288	...	5	18	24	1.733986e-07	6.242351e-07	8.323135e-07	-6.079713e+00	...	1	28779097	...	3.474744e-08
TCGA-AN-A0XP-01A-11D-A117-09	25	25	0	20	0	coding only	1	28835288	...	5	18	25	1.733986e-07	6.242351e-07	8.669932e-07	-6.061984e+00	...	2	28779097	...	6.949488e-08
TCGA-AN-A0XR-01A-11D-A10G-09	31	31	0	26	0	coding only	1	28835288	...	5	22	30	1.733986e-07	7.629541e-07	1.040392e-06	-5.982803e+00	...	3	28779097	...	1.042423e-07
TCGA-AN-A0XS-01A-22D-A10G-09	27	27	0	23	0	coding only	1	28835288	...	3	18	26	1.040392e-07	6.242351e-07	9.016730e-07	-6.044951e+00	...	5	28779097	...	1.737372e-07
TCGA-AN-A0XT-01A-11D-A10G-09	15	14	1	7	6.666667e-02	coding only	1	28835288	...	7	7	15	2.427581e-07	2.427581e-07	5.201959e-07	-6.283833e+00	...	0	28779097	...	0
TCGA-AN-A0XU-01A-11D-A10G-09	95	93	2	76	2.105263e-02	coding only	1	28835288	...	17	68	93	5.895554e-07	2.358222e-06	3.225215e-06	-5.491441e+00	...	6	28779097	...	2.084847e-07
TCGA-AN-A0XV-01A-11D-A10G-09	29	27	2	23	6.896552e-02	coding only	1	28835288	...	4	20	29	1.387189e-07	6.935946e-07	1.005712e-06	-5.997526e+00	...	3	28779097	...	1.042423e-07
TCGA-AN-A0XW-01A-11D-A10G-09	217	215	2	166	9.216590e-03	coding only	1	28835288	...	49	161	214	1.699307e-06	5.583437e-06	7.421462e-06	-5.129511e+00	...	3	28779097	...	1.042423e-07
TCGA-AO-A03L-01A-41W-A071-09	23	22	1	20	4.347826e-02	coding only	1	28835288	...	2	16	23	6.935946e-08	5.548757e-07	7.976338e-07	-6.098196e+00	...	4	28779097	...	1.389898e-07
TCGA-AO-A03M-01B-11D-A10M-09	735	717	18	544	2.448980e-02	coding only	1	28835288	...	173	526	718	5.999593e-06	1.824154e-05	2.490005e-05	-4.603800e+00	...	1	28779097	...	3.474744e-08
TCGA-AO-A03N-01B-11D-A10M-09	98	95	3	67	3.061224e-02	coding only	1	28835288	...	28	66	97	9.710324e-07	2.288862e-06	3.363934e-06	-5.473153e+00	...	0	28779097	...	0
TCGA-AO-A03O-01A-11W-A019-09	60	60	0	53	0	coding only	1	28835288	...	7	47	60	2.427581e-07	1.629947e-06	2.080784e-06	-5.681773e+00	...	6	28779097	...	2.084847e-07
TCGA-AO-A03P-01A-11W-A019-09	45	45	0	34	0	coding only	1	28835288	...	11	26	45	3.814770e-07	9.016730e-07	1.560588e-06	-5.806712e+00	...	8	28779097	...	2.779795e-07
TCGA-AO-A03R-01A-21W-A050-09	43	43	0	31	0	coding only	1	28835288	...	12	23	43	4.161568e-07	7.976338e-07	1.491228e-06	-5.826456e+00	...	8	28779097	...	2.779795e-07
TCGA-AO-A03T-01A-21W-A050-09	89	87	2	69	2.247191e-02	coding only	1	28835288	...	18	52	88	6.242351e-07	1.803346e-06	3.051816e-06	-5.515442e+00	...	16	28779097	...	5.559591e-07
TCGA-AO-A03U-01B-21D-A10M-09	7	7	0	5	0	coding only	1	28835288	...	1	2	6	3.467973e-08	6.935946e-08	2.080784e-07	-6.681773e+00	...	3	28779097	...	1.042423e-07
TCGA-AO-A03V-01A-11D-A10Y-09	51	50	1	43	1.960784e-02	coding only	1	28835288	...	7	42	51	2.427581e-07	1.456549e-06	1.768666e-06	-5.752354e+00	...	1	28779097	...	3.474744e-08
TCGA-AO-A0J2-01A-11W-A050-09	61	61	0	41	0	coding only	1	28835288	...	20	37	60	6.935946e-07	1.283150e-06	2.080784e-06	-5.681773e+00	...	3	28779097	...	1.042423e-07
TCGA-AO-A0J3-01A-11W-A050-09	76	75	1	58	1.315789e-02	coding only	1	28835288	...	17	47	75	5.895554e-07	1.629947e-06	2.600980e-06	-5.584863e+00	...	10	28779097	...	3.474744e-07
TCGA-AO-A0J4-01A-11W-A050-09	83	82	1	64	1.204819e-02	coding only	1	28835288	...	18	56	81	6.242351e-07	1.942065e-06	2.809058e-06	-5.551439e+00	...	6	28779097	...	2.084847e-07
TCGA-AO-A0J5-01A-11W-A050-09	51	51	0	41	0	coding only	1	28835288	...	10	29	50	3.467973e-07	1.005712e-06	1.733986e-06	-5.760954e+00	...	11	28779097	...	3.822219e-07
TCGA-AO-A0J6-01A-11W-A050-09	98	98	0	81	0	coding only	1	28835288	...	17	72	98	5.895554e-07	2.496941e-06	3.398614e-06	-5.468698e+00	...	9	28779097	...	3.127270e-07
TCGA-AO-A0J7-01A-11W-A050-09	22	22	0	19	0	coding only	1	28835288	...	3	13	21	1.040392e-07	4.508365e-07	7.282743e-07	-6.137705e+00	...	5	28779097	...	1.737372e-07
TCGA-AO-A0J8-01A-21D-A045-09	25	23	2	16	8.000000e-02	coding only	1	28835288	...	7	14	25	2.427581e-07	4.855162e-07	8.669932e-07	-6.061984e+00	...	2	28779097	...	6.949488e-08
TCGA-AO-A0J9-01A-11W-A050-09	95	90	5	73	5.263158e-02	coding only	1	28835288	...	16	60	93	5.548757e-07	2.080784e-06	3.225215e-06	-5.491441e+00	...	12	28779097	...	4.169693e-07
TCGA-AO-A0JA-01A-11W-A071-09	28	28	0	22	0	coding only	1	28835288	...	6	16	28	2.080784e-07	5.548757e-07	9.710324e-07	-6.012766e+00	...	6	28779097	...	2.084847e-07
TCGA-AO-A0JB-01A-11W-A071-09	79	74	5	62	6.329114e-02	coding only	1	28835288	...	12	46	78	4.161568e-07	1.595268e-06	2.705019e-06	-5.567830e+00	...	15	28779097	...	5.212116e-07
TCGA-AO-A0JC-01A-11W-A071-09	8	8	0	5	0	coding only	1	28835288	...	2	4	7	6.935946e-08	1.387189e-07	2.427581e-07	-6.614826e+00	...	1	28779097	...	3.474744e-08
TCGA-AO-A0JD-01A-11W-A071-09	100	99	1	82	1.000000e-02	coding only	1	28835288	...	17	72	100	5.895554e-07	2.496941e-06	3.467973e-06	-5.459924e+00	...	10	28779097	...	3.474744e-07
TCGA-AO-A0JE-01A-11W-A071-09	40	40	0	32	0	coding only	1	28835288	...	8	31	40	2.774378e-07	1.075072e-06	1.387189e-06	-5.857864e+00	...	1	28779097	...	3.474744e-08
TCGA-AO-A0JF-01A-11W-A071-09	27	27	0	20	0	coding only	1	28835288	...	7	13	27	2.427581e-07	4.508365e-07	9.363527e-07	-6.028561e+00	...	7	28779097	...	2.432321e-07
TCGA-AO-A0JI-01A-21W-A100-09	15	15	0	13	0	coding only	1	28835288	...	2	11	15	6.935946e-08	3.814770e-07	5.201959e-07	-6.283833e+00	...	2	28779097	...	6.949488e-08
TCGA-AO-A0JJ-01A-11W-A071-09	12	12	0	9	0	coding only	1	28835288	...	3	8	12	1.040392e-07	2.774378e-07	4.161568e-07	-6.380743e+00	...	1	28779097	...	3.474744e-08
TCGA-AO-A0JL-01A-11W-A071-09	60	59	1	47	1.666667e-02	coding only	1	28835288	...	12	41	60	4.161568e-07	1.421869e-06	2.080784e-06	-5.681773e+00	...	6	28779097	...	2.084847e-07
TCGA-AO-A0JM-01A-21W-A071-09	32	30	2	23	6.250000e-02	coding only	1	28835288	...	7	20	32	2.427581e-07	6.935946e-07	1.109751e-06	-5.954774e+00	...	3	28779097	...	1.042423e-07
TCGA-AO-A124-01A-11D-A10M-09	133	129	4	108	3.007519e-02	coding only	1	28835288	...	21	100	130	7.282743e-07	3.467973e-06	4.508365e-06	-5.345981e+00	...	5	28779097	...	1.737372e-07
TCGA-AO-A125-01A-11D-A10M-09	37	37	0	29	0	coding only	1	28835288	...	8	19	33	2.774378e-07	6.589149e-07	1.144431e-06	-5.941410e+00	...	6	28779097	...	2.084847e-07
TCGA-AO-A126-01A-11D-A10M-09	19	18	1	14	5.263158e-02	coding only	1	28835288	...	4	14	19	1.387189e-07	4.855162e-07	6.589149e-07	-6.181171e+00	...	0	28779097	...	0
TCGA-AO-A128-01A-11D-A10M-09	933	914	19	670	2.036442e-02	coding only	1	28835288	...	239	588	914	8.288455e-06	2.039168e-05	3.169727e-05	-4.498978e+00	...	68	28779097	...	2.362826e-06
TCGA-AO-A129-01A-21D-A10M-09	87	87	0	66	0	coding only	1	28835288	...	21	62	86	7.282743e-07	2.150143e-06	2.982457e-06	-5.525426e+00	...	3	28779097	...	1.042423e-07
TCGA-AO-A12A-01A-21D-A10Y-09	15	14	1	10	6.666667e-02	coding only	1	28835288	...	4	6	13	1.387189e-07	2.080784e-07	4.508365e-07	-6.345981e+00	...	2	28779097	...	6.949488e-08
TCGA-AO-A12B-01A-11D-A10M-09	16	16	0	14	0	coding only	1	28835288	...	1	11	14	3.467973e-08	3.814770e-07	4.855162e-07	-6.313796e+00	...	2	28779097	...	6.949488e-08
TCGA-AO-A12D-01A-11D-A10Y-09	35	34	1	25	2.857143e-02	coding only	1	28835288	...	7	23	32	2.427581e-07	7.976338e-07	1.109751e-06	-5.954774e+00	...	1	28779097	...	3.474744e-08
TCGA-AO-A12E-01A-11D-A10M-09	453	451	2	293	4.415011e-03	coding only	1	28835288	...	143	245	402	4.959201e-06	8.496534e-06	1.394125e-05	-4.855698e+00	...	13	28779097	...	4.517167e-07
TCGA-AO-A12F-01A-11D-A10Y-09	29	29	0	26	0	coding only	1	28835288	...	3	22	29	1.040392e-07	7.629541e-07	1.005712e-06	-5.997526e+00	...	4	28779097	...	1.389898e-07
TCGA-AO-A12G-01A-11D-A10M-09	33	32	1	26	3.030303e-02	coding only	1	28835288	...	5	21	31	1.733986e-07	7.282743e-07	1.075072e-06	-5.968563e+00	...	4	28779097	...	1.389898e-07
TCGA-AO-A12H-01A-11D-A10Y-09	20	20	0	16	0	coding only	1	28835288	...	4	13	18	1.387189e-07	4.508365e-07	6.242351e-07	-6.204652e+00	...	1	28779097	...	3.474744e-08
TCGA-AO-A1KO-01A-31D-A188-09	31	31	0	24	0	coding only	1	28835288	...	7	9	31	2.427581e-07	3.121176e-07	1.075072e-06	-5.968563e+00	...	15	28779097	...	5.212116e-07
TCGA-AO-A1KP-01A-11D-A13L-09	20	19	1	14	5.000000e-02	coding only	1	28835288	...	5	14	20	1.733986e-07	4.855162e-07	6.935946e-07	-6.158894e+00	...	0	28779097	...	0
TCGA-AO-A1KR-01A-12D-A142-09	67	66	1	47	1.492537e-02	coding only	1	28835288	...	19	44	66	6.589149e-07	1.525908e-06	2.288862e-06	-5.640380e+00	...	2	28779097	...	6.949488e-08
TCGA-AO-A1KS-01A-11D-A13L-09	41	41	0	28	0	coding only	1	28835288	...	13	24	41	4.508365e-07	8.323135e-07	1.421869e-06	-5.847140e+00	...	4	28779097	...	1.389898e-07
TCGA-AO-A1KT-01A-11D-A13L-09	38	38	0	24	0	coding only	1	28835288	...	14	23	38	4.855162e-07	7.976338e-07	1.317830e-06	-5.880141e+00	...	1	28779097	...	3.474744e-08
TCGA-AQ-A04H-01B-11D-A10M-09	68	67	1	51	1.470588e-02	coding only	1	28835288	...	15	47	66	5.201959e-07	1.629947e-06	2.288862e-06	-5.640380e+00	...	3	28779097	...	1.042423e-07
TCGA-AQ-A04J-01A-02W-A050-09	55	55	0	43	0	coding only	1	28835288	...	12	27	54	4.161568e-07	9.363527e-07	1.872705e-06	-5.727531e+00	...	15	28779097	...	5.212116e-07
TCGA-AQ-A04L-01B-21D-A10M-09	47	45	2	33	4.255319e-02	coding only	1	28835288	...	12	27	46	4.161568e-07	9.363527e-07	1.595268e-06	-5.797166e+00	...	5	28779097	...	1.737372e-07
TCGA-AQ-A0Y5-01A-11D-A14K-09	46	46	0	36	0	coding only	1	28835288	...	10	35	45	3.467973e-07	1.213791e-06	1.560588e-06	-5.806712e+00	...	0	28779097	...	0
TCGA-AQ-A1H2-01A-11D-A13L-09	27	26	1	21	3.703704e-02	coding only	1	28835288	...	5	17	27	1.733986e-07	5.895554e-07	9.363527e-07	-6.028561e+00	...	4	28779097	...	1.389898e-07
TCGA-AQ-A1H3-01A-31D-A13L-09	27	27	0	18	0	coding only	1	28835288	...	9	15	27	3.121176e-07	5.201959e-07	9.363527e-07	-6.028561e+00	...	3	28779097	...	1.042423e-07
TCGA-AQ-A54N-01A-11D-A25Q-09	68	67	1	57	1.470588e-02	coding only	1	28835288	...	10	50	65	3.467973e-07	1.733986e-06	2.254182e-06	-5.647011e+00	...	4	28779097	...	1.389898e-07
TCGA-AQ-A54O-01A-11D-A25Q-09	28	28	0	21	0	coding only	1	28835288	...	7	17	28	2.427581e-07	5.895554e-07	9.710324e-07	-6.012766e+00	...	4	28779097	...	1.389898e-07
TCGA-AR-A0TS-01A-11D-A10Y-09	39	39	0	30	0	coding only	1	28835288	...	9	28	39	3.121176e-07	9.710324e-07	1.352509e-06	-5.868860e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A0TU-01A-31D-A10G-09	76	74	2	55	2.631579e-02	coding only	1	28835288	...	19	46	76	6.589149e-07	1.595268e-06	2.635659e-06	-5.579111e+00	...	9	28779097	...	3.127270e-07
TCGA-AR-A0TX-01A-11D-A099-09	276	273	3	214	1.086957e-02	coding only	1	28835288	...	57	206	270	1.976745e-06	7.144024e-06	9.363527e-06	-5.028561e+00	...	4	28779097	...	1.389898e-07
TCGA-AR-A0TY-01A-12W-A12T-09	85	83	2	74	2.352941e-02	coding only	1	28835288	...	9	36	85	3.121176e-07	1.248470e-06	2.947777e-06	-5.530505e+00	...	38	28779097	...	1.320403e-06
TCGA-AR-A0U0-01A-11D-A10G-09	44	43	1	37	2.272727e-02	coding only	1	28835288	...	6	19	44	2.080784e-07	6.589149e-07	1.525908e-06	-5.816472e+00	...	18	28779097	...	6.254540e-07
TCGA-AR-A0U1-01A-11D-A10Y-09	63	60	3	51	4.761905e-02	coding only	1	28835288	...	9	50	63	3.121176e-07	1.733986e-06	2.184823e-06	-5.660584e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A0U2-01A-11D-A10G-09	55	54	1	44	1.818182e-02	coding only	1	28835288	...	9	31	53	3.121176e-07	1.075072e-06	1.838026e-06	-5.735648e+00	...	11	28779097	...	3.822219e-07
TCGA-AR-A0U3-01A-11D-A10G-09	33	32	1	25	3.030303e-02	coding only	1	28835288	...	7	20	32	2.427581e-07	6.935946e-07	1.109751e-06	-5.954774e+00	...	4	28779097	...	1.389898e-07
TCGA-AR-A1AH-01A-11D-A12B-09	90	85	5	56	5.555556e-02	coding only	1	28835288	...	28	51	88	9.710324e-07	1.768666e-06	3.051816e-06	-5.515442e+00	...	4	28779097	...	1.389898e-07
TCGA-AR-A1AI-01A-11D-A12Q-09	59	58	1	47	1.694915e-02	coding only	1	28835288	...	11	38	59	3.814770e-07	1.317830e-06	2.046104e-06	-5.689072e+00	...	9	28779097	...	3.127270e-07
TCGA-AR-A1AJ-01A-21D-A12Q-09	23	22	1	20	4.347826e-02	coding only	1	28835288	...	2	16	22	6.935946e-08	5.548757e-07	7.629541e-07	-6.117502e+00	...	3	28779097	...	1.042423e-07
TCGA-AR-A1AK-01A-21D-A12Q-09	60	57	3	45	5.000000e-02	coding only	1	28835288	...	11	42	59	3.814770e-07	1.456549e-06	2.046104e-06	-5.689072e+00	...	3	28779097	...	1.042423e-07
TCGA-AR-A1AL-01A-21D-A12Q-09	25	23	2	19	8.000000e-02	coding only	1	28835288	...	4	17	25	1.387189e-07	5.895554e-07	8.669932e-07	-6.061984e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A1AM-01A-41D-A228-09	25	24	1	20	4.000000e-02	coding only	1	28835288	...	4	19	25	1.387189e-07	6.589149e-07	8.669932e-07	-6.061984e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A1AN-01A-11D-A12Q-09	17	17	0	13	0	coding only	1	28835288	...	4	12	17	1.387189e-07	4.161568e-07	5.895554e-07	-6.229475e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A1AO-01A-11D-A12Q-09	6	6	0	3	0	coding only	1	28835288	...	3	3	6	1.040392e-07	1.040392e-07	2.080784e-07	-6.681773e+00	...	0	28779097	...	0
TCGA-AR-A1AP-01A-11D-A12Q-09	31	31	0	29	0	coding only	1	28835288	...	2	26	29	6.935946e-08	9.016730e-07	1.005712e-06	-5.997526e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A1AQ-01A-11D-A12Q-09	39	39	0	32	0	coding only	1	28835288	...	6	24	37	2.080784e-07	8.323135e-07	1.283150e-06	-5.891723e+00	...	7	28779097	...	2.432321e-07
TCGA-AR-A1AR-01A-31D-A135-09	51	50	1	39	1.960784e-02	coding only	1	28835288	...	11	36	50	3.814770e-07	1.248470e-06	1.733986e-06	-5.760954e+00	...	3	28779097	...	1.042423e-07
TCGA-AR-A1AS-01A-11D-A12Q-09	38	38	0	28	0	coding only	1	28835288	...	10	26	38	3.467973e-07	9.016730e-07	1.317830e-06	-5.880141e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A1AT-01A-11D-A12Q-09	28	28	0	21	0	coding only	1	28835288	...	7	16	28	2.427581e-07	5.548757e-07	9.710324e-07	-6.012766e+00	...	5	28779097	...	1.737372e-07
TCGA-AR-A1AU-01A-11D-A12Q-09	19	17	2	13	1.052632e-01	coding only	1	28835288	...	4	12	18	1.387189e-07	4.161568e-07	6.242351e-07	-6.204652e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A1AV-01A-21D-A12Q-09	38	37	1	32	2.631579e-02	coding only	1	28835288	...	5	28	38	1.733986e-07	9.710324e-07	1.317830e-06	-5.880141e+00	...	4	28779097	...	1.389898e-07
TCGA-AR-A1AW-01A-21D-A12Q-09	19	19	0	16	0	coding only	1	28835288	...	3	15	19	1.040392e-07	5.201959e-07	6.589149e-07	-6.181171e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A1AX-01A-11D-A12Q-09	13	13	0	11	0	coding only	1	28835288	...	2	10	13	6.935946e-08	3.467973e-07	4.508365e-07	-6.345981e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A1AY-01A-21D-A12Q-09	48	47	1	37	2.083333e-02	coding only	1	28835288	...	10	33	46	3.467973e-07	1.144431e-06	1.595268e-06	-5.797166e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A24H-01A-11D-A167-09	122	121	1	98	8.196721e-03	coding only	1	28835288	...	23	90	121	7.976338e-07	3.121176e-06	4.196247e-06	-5.377139e+00	...	7	28779097	...	2.432321e-07
TCGA-AR-A24K-01A-11D-A167-09	26	25	1	20	3.846154e-02	coding only	1	28835288	...	5	19	26	1.733986e-07	6.589149e-07	9.016730e-07	-6.044951e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A24L-01A-11D-A167-09	42	42	0	31	0	coding only	1	28835288	...	11	27	41	3.814770e-07	9.363527e-07	1.421869e-06	-5.847140e+00	...	3	28779097	...	1.042423e-07
TCGA-AR-A24M-01A-11D-A167-09	19	18	1	13	5.263158e-02	coding only	1	28835288	...	5	12	19	1.733986e-07	4.161568e-07	6.589149e-07	-6.181171e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A24N-01A-11D-A167-09	31	28	3	22	9.677419e-02	coding only	1	28835288	...	6	20	31	2.080784e-07	6.935946e-07	1.075072e-06	-5.968563e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A24O-01A-11D-A167-09	17	17	0	14	0	coding only	1	28835288	...	3	13	16	1.040392e-07	4.508365e-07	5.548757e-07	-6.255804e+00	...	0	28779097	...	0
TCGA-AR-A24P-01A-11D-A167-09	17	17	0	16	0	coding only	1	28835288	...	1	12	16	3.467973e-08	4.161568e-07	5.548757e-07	-6.255804e+00	...	3	28779097	...	1.042423e-07
TCGA-AR-A24Q-01A-12D-A167-09	142	141	1	103	7.042254e-03	coding only	1	28835288	...	38	93	138	1.317830e-06	3.225215e-06	4.785803e-06	-5.320045e+00	...	6	28779097	...	2.084847e-07
TCGA-AR-A24R-01A-11D-A167-09	23	23	0	18	0	coding only	1	28835288	...	5	13	23	1.733986e-07	4.508365e-07	7.976338e-07	-6.098196e+00	...	5	28779097	...	1.737372e-07
TCGA-AR-A24S-01A-11D-A167-09	40	40	0	29	0	coding only	1	28835288	...	11	27	39	3.814770e-07	9.363527e-07	1.352509e-06	-5.868860e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A24T-01A-11D-A167-09	20	20	0	16	0	coding only	1	28835288	...	4	13	20	1.387189e-07	4.508365e-07	6.935946e-07	-6.158894e+00	...	3	28779097	...	1.042423e-07
TCGA-AR-A24U-01A-11D-A167-09	19	19	0	13	0	coding only	1	28835288	...	6	13	19	2.080784e-07	4.508365e-07	6.589149e-07	-6.181171e+00	...	0	28779097	...	0
TCGA-AR-A24V-01A-21D-A167-09	24	24	0	16	0	coding only	1	28835288	...	7	15	22	2.427581e-07	5.201959e-07	7.629541e-07	-6.117502e+00	...	0	28779097	...	0
TCGA-AR-A24W-01A-11D-A17G-09	5	5	0	5	0	coding only	1	28835288	...	0	5	5	0	1.733986e-07	1.733986e-07	-6.760954e+00	...	0	28779097	...	0
TCGA-AR-A24X-01A-11D-A167-09	27	26	1	17	3.703704e-02	coding only	1	28835288	...	8	15	26	2.774378e-07	5.201959e-07	9.016730e-07	-6.044951e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A24Z-01A-11D-A167-09	38	38	0	32	0	coding only	1	28835288	...	6	30	38	2.080784e-07	1.040392e-06	1.317830e-06	-5.880141e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A250-01A-31D-A167-09	65	64	1	49	1.538462e-02	coding only	1	28835288	...	15	44	63	5.201959e-07	1.525908e-06	2.184823e-06	-5.660584e+00	...	3	28779097	...	1.042423e-07
TCGA-AR-A251-01A-12D-A167-09	148	147	1	120	6.756757e-03	coding only	1	28835288	...	27	112	147	9.363527e-07	3.884130e-06	5.097920e-06	-5.292607e+00	...	7	28779097	...	2.432321e-07
TCGA-AR-A252-01A-11D-A167-09	8	8	0	7	0	coding only	1	28835288	...	1	6	8	3.467973e-08	2.080784e-07	2.774378e-07	-6.556834e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A254-01A-21D-A167-09	30	29	1	23	3.333333e-02	coding only	1	28835288	...	6	21	30	2.080784e-07	7.282743e-07	1.040392e-06	-5.982803e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A255-01A-11D-A167-09	55	53	2	43	3.636364e-02	coding only	1	28835288	...	10	39	54	3.467973e-07	1.352509e-06	1.872705e-06	-5.727531e+00	...	3	28779097	...	1.042423e-07
TCGA-AR-A256-01A-11D-A167-09	182	179	3	138	1.648352e-02	coding only	1	28835288	...	40	128	178	1.387189e-06	4.439005e-06	6.172992e-06	-5.209504e+00	...	8	28779097	...	2.779795e-07
TCGA-AR-A2LE-01A-11D-A17W-09	302	295	7	216	2.317881e-02	coding only	1	28835288	...	75	214	298	2.600980e-06	7.421462e-06	1.033456e-05	-4.985708e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A2LH-01A-31D-A18P-09	20	20	0	17	0	coding only	1	28835288	...	3	17	20	1.040392e-07	5.895554e-07	6.935946e-07	-6.158894e+00	...	0	28779097	...	0
TCGA-AR-A2LJ-01A-12D-A19Y-09	12	10	2	7	1.666667e-01	coding only	1	28835288	...	3	7	12	1.040392e-07	2.427581e-07	4.161568e-07	-6.380743e+00	...	0	28779097	...	0
TCGA-AR-A2LK-01A-11D-A17W-09	37	37	0	27	0	coding only	1	28835288	...	10	25	37	3.467973e-07	8.669932e-07	1.283150e-06	-5.891723e+00	...	2	28779097	...	6.949488e-08
TCGA-AR-A2LL-01A-11D-A17W-09	28	28	0	25	0	coding only	1	28835288	...	3	24	28	1.040392e-07	8.323135e-07	9.710324e-07	-6.012766e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A2LM-01A-11D-A17W-09	14	14	0	11	0	coding only	1	28835288	...	3	10	14	1.040392e-07	3.467973e-07	4.855162e-07	-6.313796e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A2LN-01A-21D-A18P-09	37	37	0	25	0	coding only	1	28835288	...	12	21	34	4.161568e-07	7.282743e-07	1.179111e-06	-5.928445e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A2LO-01A-31D-A18P-09	11	11	0	10	0	coding only	1	28835288	...	1	10	11	3.467973e-08	3.467973e-07	3.814770e-07	-6.418532e+00	...	0	28779097	...	0
TCGA-AR-A2LQ-01A-22D-A18P-09	4	4	0	3	0	coding only	1	28835288	...	1	3	4	3.467973e-08	1.040392e-07	1.387189e-07	-6.857864e+00	...	0	28779097	...	0
TCGA-AR-A2LR-01A-12D-A18P-09	59	59	0	46	0	coding only	1	28835288	...	13	39	58	4.508365e-07	1.352509e-06	2.011424e-06	-5.696496e+00	...	6	28779097	...	2.084847e-07
TCGA-AR-A5QM-01A-11D-A27P-09	26	23	3	19	1.153846e-01	coding only	1	28835288	...	4	18	26	1.387189e-07	6.242351e-07	9.016730e-07	-6.044951e+00	...	1	28779097	...	3.474744e-08
TCGA-AR-A5QN-01A-12D-A28B-09	34	33	1	24	2.941176e-02	coding only	1	28835288	...	8	18	32	2.774378e-07	6.242351e-07	1.109751e-06	-5.954774e+00	...	5	28779097	...	1.737372e-07
TCGA-AR-A5QP-01A-11D-A28B-09	21	21	0	20	0	coding only	1	28835288	...	1	16	21	3.467973e-08	5.548757e-07	7.282743e-07	-6.137705e+00	...	4	28779097	...	1.389898e-07
TCGA-AR-A5QQ-01A-11D-A28B-09	54	53	1	42	1.851852e-02	coding only	1	28835288	...	11	37	53	3.814770e-07	1.283150e-06	1.838026e-06	-5.735648e+00	...	4	28779097	...	1.389898e-07
TCGA-B6-A0I1-01A-11D-A21Q-09	51	48	3	36	5.882353e-02	coding only	1	28835288	...	11	35	50	3.814770e-07	1.213791e-06	1.733986e-06	-5.760954e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0I2-01A-11W-A050-09	49	48	1	39	2.040816e-02	coding only	1	28835288	...	9	36	48	3.121176e-07	1.248470e-06	1.664627e-06	-5.778683e+00	...	2	28779097	...	6.949488e-08
TCGA-B6-A0I5-01A-11W-A100-09	21	20	1	16	4.761905e-02	coding only	1	28835288	...	4	13	21	1.387189e-07	4.508365e-07	7.282743e-07	-6.137705e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A0I6-01A-11D-A128-09	93	89	4	69	4.301075e-02	coding only	1	28835288	...	20	68	93	6.935946e-07	2.358222e-06	3.225215e-06	-5.491441e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0I8-01A-11W-A050-09	102	99	3	73	2.941176e-02	coding only	1	28835288	...	26	60	100	9.016730e-07	2.080784e-06	3.467973e-06	-5.459924e+00	...	11	28779097	...	3.822219e-07
TCGA-B6-A0I9-01A-11W-A050-09	68	67	1	56	1.470588e-02	coding only	1	28835288	...	11	50	68	3.814770e-07	1.733986e-06	2.358222e-06	-5.627415e+00	...	6	28779097	...	2.084847e-07
TCGA-B6-A0IA-01A-11W-A050-09	46	45	1	39	2.173913e-02	coding only	1	28835288	...	6	11	46	2.080784e-07	3.814770e-07	1.595268e-06	-5.797166e+00	...	28	28779097	...	9.729284e-07
TCGA-B6-A0IB-01A-11W-A050-09	57	57	0	49	0	coding only	1	28835288	...	8	35	54	2.774378e-07	1.213791e-06	1.872705e-06	-5.727531e+00	...	11	28779097	...	3.822219e-07
TCGA-B6-A0IC-01A-11W-A050-09	43	41	2	34	4.651163e-02	coding only	1	28835288	...	7	23	42	2.427581e-07	7.976338e-07	1.456549e-06	-5.836675e+00	...	10	28779097	...	3.474744e-07
TCGA-B6-A0IE-01A-11W-A050-09	29	28	1	25	3.448276e-02	coding only	1	28835288	...	3	21	29	1.040392e-07	7.282743e-07	1.005712e-06	-5.997526e+00	...	4	28779097	...	1.389898e-07
TCGA-B6-A0IG-01A-11W-A050-09	42	41	1	36	2.380952e-02	coding only	1	28835288	...	5	26	42	1.733986e-07	9.016730e-07	1.456549e-06	-5.836675e+00	...	10	28779097	...	3.474744e-07
TCGA-B6-A0IH-01A-11D-A10Y-09	23	23	0	20	0	coding only	1	28835288	...	3	19	23	1.040392e-07	6.589149e-07	7.976338e-07	-6.098196e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0IJ-01A-11W-A050-09	129	126	3	107	2.325581e-02	coding only	1	28835288	...	19	99	126	6.589149e-07	3.433293e-06	4.369646e-06	-5.359554e+00	...	5	28779097	...	1.737372e-07
TCGA-B6-A0IK-01A-12W-A071-09	139	135	4	103	2.877698e-02	coding only	1	28835288	...	32	85	139	1.109751e-06	2.947777e-06	4.820482e-06	-5.316909e+00	...	18	28779097	...	6.254540e-07
TCGA-B6-A0IM-01A-11W-A050-09	32	32	0	25	0	coding only	1	28835288	...	7	18	31	2.427581e-07	6.242351e-07	1.075072e-06	-5.968563e+00	...	6	28779097	...	2.084847e-07
TCGA-B6-A0IN-01A-11W-A050-09	35	34	1	25	2.857143e-02	coding only	1	28835288	...	9	13	35	3.121176e-07	4.508365e-07	1.213791e-06	-5.915856e+00	...	12	28779097	...	4.169693e-07
TCGA-B6-A0IO-01A-11W-A050-09	64	61	3	45	4.687500e-02	coding only	1	28835288	...	16	35	63	5.548757e-07	1.213791e-06	2.184823e-06	-5.660584e+00	...	10	28779097	...	3.474744e-07
TCGA-B6-A0IP-01A-11D-A045-09	25	24	1	20	4.000000e-02	coding only	1	28835288	...	4	17	24	1.387189e-07	5.895554e-07	8.323135e-07	-6.079713e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A0IQ-01A-11W-A050-09	55	55	0	43	0	coding only	1	28835288	...	12	33	54	4.161568e-07	1.144431e-06	1.872705e-06	-5.727531e+00	...	9	28779097	...	3.127270e-07
TCGA-B6-A0RE-01A-11W-A071-09	100	99	1	78	1.000000e-02	coding only	1	28835288	...	21	67	100	7.282743e-07	2.323542e-06	3.467973e-06	-5.459924e+00	...	11	28779097	...	3.822219e-07
TCGA-B6-A0RG-01A-11W-A071-09	57	57	0	48	0	coding only	1	28835288	...	9	39	57	3.121176e-07	1.352509e-06	1.976745e-06	-5.704049e+00	...	9	28779097	...	3.127270e-07
TCGA-B6-A0RH-01A-21D-A10Y-09	36	36	0	29	0	coding only	1	28835288	...	7	26	36	2.427581e-07	9.016730e-07	1.248470e-06	-5.903622e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A0RI-01A-11W-A071-09	16	16	0	13	0	coding only	1	28835288	...	3	8	16	1.040392e-07	2.774378e-07	5.548757e-07	-6.255804e+00	...	5	28779097	...	1.737372e-07
TCGA-B6-A0RN-01A-12D-A099-09	36	36	0	25	0	coding only	1	28835288	...	11	21	36	3.814770e-07	7.282743e-07	1.248470e-06	-5.903622e+00	...	4	28779097	...	1.389898e-07
TCGA-B6-A0RO-01A-22D-A099-09	33	32	1	26	3.030303e-02	coding only	1	28835288	...	6	20	31	2.080784e-07	6.935946e-07	1.075072e-06	-5.968563e+00	...	4	28779097	...	1.389898e-07
TCGA-B6-A0RP-01A-21D-A099-09	19	19	0	16	0	coding only	1	28835288	...	3	15	18	1.040392e-07	5.201959e-07	6.242351e-07	-6.204652e+00	...	0	28779097	...	0
TCGA-B6-A0RQ-01A-11D-A10Y-09	15	15	0	10	0	coding only	1	28835288	...	4	9	14	1.387189e-07	3.121176e-07	4.855162e-07	-6.313796e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0RT-01A-21D-A099-09	12	12	0	11	0	coding only	1	28835288	...	1	10	12	3.467973e-08	3.467973e-07	4.161568e-07	-6.380743e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0RU-01A-11D-A099-09	42	41	1	33	2.380952e-02	coding only	1	28835288	...	8	24	41	2.774378e-07	8.323135e-07	1.421869e-06	-5.847140e+00	...	8	28779097	...	2.779795e-07
TCGA-B6-A0RV-01A-11D-A099-09	44	44	0	30	0	coding only	1	28835288	...	14	28	43	4.855162e-07	9.710324e-07	1.491228e-06	-5.826456e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0WS-01A-11D-A10Y-09	22	22	0	12	0	coding only	1	28835288	...	9	11	21	3.121176e-07	3.814770e-07	7.282743e-07	-6.137705e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0WT-01A-11D-A10G-09	19	18	1	13	5.263158e-02	coding only	1	28835288	...	5	11	18	1.733986e-07	3.814770e-07	6.242351e-07	-6.204652e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0WV-01A-11D-A10G-09	27	27	0	22	0	coding only	1	28835288	...	5	15	27	1.733986e-07	5.201959e-07	9.363527e-07	-6.028561e+00	...	7	28779097	...	2.432321e-07
TCGA-B6-A0WW-01A-11D-A10G-09	36	36	0	27	0	coding only	1	28835288	...	9	24	36	3.121176e-07	8.323135e-07	1.248470e-06	-5.903622e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A0WX-01A-11D-A10G-09	30	30	0	22	0	coding only	1	28835288	...	8	21	30	2.774378e-07	7.282743e-07	1.040392e-06	-5.982803e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0WY-01A-11D-A10G-09	13	12	1	11	7.692308e-02	coding only	1	28835288	...	1	10	13	3.467973e-08	3.467973e-07	4.508365e-07	-6.345981e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0WZ-01A-11D-A10G-09	39	39	0	23	0	coding only	1	28835288	...	16	23	39	5.548757e-07	7.976338e-07	1.352509e-06	-5.868860e+00	...	0	28779097	...	0
TCGA-B6-A0X0-01A-21D-A10Y-09	19	19	0	14	0	coding only	1	28835288	...	5	13	19	1.733986e-07	4.508365e-07	6.589149e-07	-6.181171e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A0X1-01A-11D-A10G-09	60	56	4	44	6.666667e-02	coding only	1	28835288	...	12	40	59	4.161568e-07	1.387189e-06	2.046104e-06	-5.689072e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A0X4-01A-11D-A10G-09	19	19	0	15	0	coding only	1	28835288	...	4	13	19	1.387189e-07	4.508365e-07	6.589149e-07	-6.181171e+00	...	2	28779097	...	6.949488e-08
TCGA-B6-A0X5-01A-21D-A10G-09	31	30	1	20	3.225806e-02	coding only	1	28835288	...	10	16	30	3.467973e-07	5.548757e-07	1.040392e-06	-5.982803e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A0X7-01A-11D-A10M-09	17	16	1	11	5.882353e-02	coding only	1	28835288	...	5	8	17	1.733986e-07	2.774378e-07	5.895554e-07	-6.229475e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A1KC-01B-11D-A159-09	25	24	1	17	4.000000e-02	coding only	1	28835288	...	7	14	25	2.427581e-07	4.855162e-07	8.669932e-07	-6.061984e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A1KF-01A-11D-A13L-09	47	47	0	34	0	coding only	1	28835288	...	13	29	47	4.508365e-07	1.005712e-06	1.629947e-06	-5.787826e+00	...	5	28779097	...	1.737372e-07
TCGA-B6-A1KI-01A-11D-A14K-09	18	18	0	12	0	coding only	1	28835288	...	6	10	18	2.080784e-07	3.467973e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-B6-A1KN-01A-11D-A13L-09	53	52	1	44	1.886792e-02	coding only	1	28835288	...	8	40	52	2.774378e-07	1.387189e-06	1.803346e-06	-5.743921e+00	...	3	28779097	...	1.042423e-07
TCGA-B6-A2IU-01A-32D-A19T-09	39	39	0	30	0	coding only	1	28835288	...	9	29	38	3.121176e-07	1.005712e-06	1.317830e-06	-5.880141e+00	...	0	28779097	...	0
TCGA-B6-A3ZX-01A-11D-A23C-09	48	48	0	32	0	coding only	1	28835288	...	16	29	47	5.548757e-07	1.005712e-06	1.629947e-06	-5.787826e+00	...	2	28779097	...	6.949488e-08
TCGA-B6-A400-01A-11D-A23C-09	113	109	4	88	3.539823e-02	coding only	1	28835288	...	21	83	112	7.282743e-07	2.878418e-06	3.884130e-06	-5.410706e+00	...	5	28779097	...	1.737372e-07
TCGA-B6-A401-01A-11D-A23C-09	20	20	0	16	0	coding only	1	28835288	...	4	15	20	1.387189e-07	5.201959e-07	6.935946e-07	-6.158894e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A402-01A-11D-A23C-09	47	46	1	33	2.127660e-02	coding only	1	28835288	...	12	31	45	4.161568e-07	1.075072e-06	1.560588e-06	-5.806712e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A408-01A-12D-A243-09	42	41	1	28	2.380952e-02	coding only	1	28835288	...	12	21	41	4.161568e-07	7.282743e-07	1.421869e-06	-5.847140e+00	...	7	28779097	...	2.432321e-07
TCGA-B6-A409-01A-11D-A243-09	33	32	1	21	3.030303e-02	coding only	1	28835288	...	11	19	32	3.814770e-07	6.589149e-07	1.109751e-06	-5.954774e+00	...	1	28779097	...	3.474744e-08
TCGA-B6-A40B-01A-11D-A23C-09	51	50	1	39	1.960784e-02	coding only	1	28835288	...	11	38	50	3.814770e-07	1.317830e-06	1.733986e-06	-5.760954e+00	...	0	28779097	...	0
TCGA-B6-A40C-01A-11D-A23C-09	38	38	0	28	0	coding only	1	28835288	...	10	24	37	3.467973e-07	8.323135e-07	1.283150e-06	-5.891723e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0AU-01A-11D-A12Q-09	20	20	0	14	0	coding only	1	28835288	...	6	12	20	2.080784e-07	4.161568e-07	6.935946e-07	-6.158894e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0AV-01A-31D-A10Y-09	63	61	2	47	3.174603e-02	coding only	1	28835288	...	14	42	62	4.855162e-07	1.456549e-06	2.150143e-06	-5.667533e+00	...	4	28779097	...	1.389898e-07
TCGA-BH-A0AW-01A-11W-A071-09	142	140	2	104	1.408451e-02	coding only	1	28835288	...	36	94	142	1.248470e-06	3.259895e-06	4.924522e-06	-5.307636e+00	...	10	28779097	...	3.474744e-07
TCGA-BH-A0AY-01A-21W-A019-09	51	51	0	42	0	coding only	1	28835288	...	9	29	51	3.121176e-07	1.005712e-06	1.768666e-06	-5.752354e+00	...	13	28779097	...	4.517167e-07
TCGA-BH-A0AZ-01A-21D-A12Q-09	56	56	0	44	0	coding only	1	28835288	...	12	39	55	4.161568e-07	1.352509e-06	1.907385e-06	-5.719562e+00	...	4	28779097	...	1.389898e-07
TCGA-BH-A0B0-01A-21D-A10Y-09	49	48	1	35	2.040816e-02	coding only	1	28835288	...	13	34	48	4.508365e-07	1.179111e-06	1.664627e-06	-5.778683e+00	...	0	28779097	...	0
TCGA-BH-A0B1-01A-12W-A071-09	57	57	0	45	0	coding only	1	28835288	...	12	27	57	4.161568e-07	9.363527e-07	1.976745e-06	-5.704049e+00	...	18	28779097	...	6.254540e-07
TCGA-BH-A0B3-01A-11W-A071-09	34	34	0	27	0	coding only	1	28835288	...	7	24	34	2.427581e-07	8.323135e-07	1.179111e-06	-5.928445e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0B4-01A-11W-A019-09	59	58	1	52	1.694915e-02	coding only	1	28835288	...	6	47	59	2.080784e-07	1.629947e-06	2.046104e-06	-5.689072e+00	...	5	28779097	...	1.737372e-07
TCGA-BH-A0B5-01A-11D-A12Q-09	60	60	0	49	0	coding only	1	28835288	...	10	45	59	3.467973e-07	1.560588e-06	2.046104e-06	-5.689072e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0B6-01A-11D-A19Y-09	707	692	15	483	2.121641e-02	coding only	1	28835288	...	205	477	694	7.109345e-06	1.654223e-05	2.406773e-05	-4.618565e+00	...	0	28779097	...	0
TCGA-BH-A0B7-01A-12D-A10Y-09	13	13	0	11	0	coding only	1	28835288	...	2	11	13	6.935946e-08	3.814770e-07	4.508365e-07	-6.345981e+00	...	0	28779097	...	0
TCGA-BH-A0B8-01A-21W-A071-09	39	38	1	31	2.564103e-02	coding only	1	28835288	...	7	21	39	2.427581e-07	7.282743e-07	1.352509e-06	-5.868860e+00	...	10	28779097	...	3.474744e-07
TCGA-BH-A0B9-01A-11W-A071-09	38	38	0	31	0	coding only	1	28835288	...	7	25	38	2.427581e-07	8.669932e-07	1.317830e-06	-5.880141e+00	...	6	28779097	...	2.084847e-07
TCGA-BH-A0BA-01A-11W-A071-09	28	28	0	23	0	coding only	1	28835288	...	5	20	28	1.733986e-07	6.935946e-07	9.710324e-07	-6.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0BC-01A-22D-A099-09	32	32	0	22	0	coding only	1	28835288	...	10	21	32	3.467973e-07	7.282743e-07	1.109751e-06	-5.954774e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A0BD-01A-11W-A050-09	17	17	0	15	0	coding only	1	28835288	...	2	11	16	6.935946e-08	3.814770e-07	5.548757e-07	-6.255804e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0BF-01A-21D-A12Q-09	29	27	2	17	6.896552e-02	coding only	1	28835288	...	10	15	29	3.467973e-07	5.201959e-07	1.005712e-06	-5.997526e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0BG-01A-11D-A10Y-09	38	38	0	28	0	coding only	1	28835288	...	9	25	36	3.121176e-07	8.669932e-07	1.248470e-06	-5.903622e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0BJ-01A-11W-A071-09	28	26	2	23	7.142857e-02	coding only	1	28835288	...	3	11	28	1.040392e-07	3.814770e-07	9.710324e-07	-6.012766e+00	...	12	28779097	...	4.169693e-07
TCGA-BH-A0BL-01A-11D-A10Y-09	50	48	2	41	4.000000e-02	coding only	1	28835288	...	7	37	50	2.427581e-07	1.283150e-06	1.733986e-06	-5.760954e+00	...	4	28779097	...	1.389898e-07
TCGA-BH-A0BM-01A-11W-A071-09	38	37	1	28	2.631579e-02	coding only	1	28835288	...	9	12	38	3.121176e-07	4.161568e-07	1.317830e-06	-5.880141e+00	...	16	28779097	...	5.559591e-07
TCGA-BH-A0BO-01A-23D-A12B-09	22	22	0	19	0	coding only	1	28835288	...	3	16	22	1.040392e-07	5.548757e-07	7.629541e-07	-6.117502e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0BP-01A-11D-A10Y-09	132	130	2	103	1.515152e-02	coding only	1	28835288	...	27	96	130	9.363527e-07	3.329254e-06	4.508365e-06	-5.345981e+00	...	5	28779097	...	1.737372e-07
TCGA-BH-A0BQ-01A-21D-A10Y-09	20	20	0	14	0	coding only	1	28835288	...	6	14	20	2.080784e-07	4.855162e-07	6.935946e-07	-6.158894e+00	...	0	28779097	...	0
TCGA-BH-A0BR-01A-21W-A12T-09	58	57	1	48	1.724138e-02	coding only	1	28835288	...	9	35	55	3.121176e-07	1.213791e-06	1.907385e-06	-5.719562e+00	...	11	28779097	...	3.822219e-07
TCGA-BH-A0BS-01A-11D-A12Q-09	14	14	0	9	0	coding only	1	28835288	...	5	7	14	1.733986e-07	2.427581e-07	4.855162e-07	-6.313796e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0BT-01A-11D-A12Q-09	32	30	2	26	6.250000e-02	coding only	1	28835288	...	3	25	31	1.040392e-07	8.669932e-07	1.075072e-06	-5.968563e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A0BV-01A-11W-A019-09	33	32	1	26	3.030303e-02	coding only	1	28835288	...	6	20	33	2.080784e-07	6.935946e-07	1.144431e-06	-5.941410e+00	...	6	28779097	...	2.084847e-07
TCGA-BH-A0BW-01A-11D-A10Y-09	85	82	3	65	3.529412e-02	coding only	1	28835288	...	16	52	82	5.548757e-07	1.803346e-06	2.843738e-06	-5.546110e+00	...	11	28779097	...	3.822219e-07
TCGA-BH-A0BZ-01A-31D-A12Q-09	216	212	4	176	1.851852e-02	coding only	1	28835288	...	36	165	215	1.248470e-06	5.722155e-06	7.456142e-06	-5.127486e+00	...	10	28779097	...	3.474744e-07
TCGA-BH-A0C0-01A-21W-A071-09	68	68	0	59	0	coding only	1	28835288	...	9	55	67	3.121176e-07	1.907385e-06	2.323542e-06	-5.633849e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0C1-01B-11D-A12B-09	31	30	1	22	3.225806e-02	coding only	1	28835288	...	7	20	30	2.427581e-07	6.935946e-07	1.040392e-06	-5.982803e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0C3-01A-21D-A12Q-09	14	14	0	10	0	coding only	1	28835288	...	4	9	14	1.387189e-07	3.121176e-07	4.855162e-07	-6.313796e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A0C7-01B-11D-A10Y-09	35	34	1	25	2.857143e-02	coding only	1	28835288	...	9	21	35	3.121176e-07	7.282743e-07	1.213791e-06	-5.915856e+00	...	4	28779097	...	1.389898e-07
TCGA-BH-A0DD-01A-31D-A12Q-09	20	20	0	12	0	coding only	1	28835288	...	7	9	17	2.427581e-07	3.121176e-07	5.895554e-07	-6.229475e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A0DE-01A-11D-A10Y-09	28	27	1	21	3.571429e-02	coding only	1	28835288	...	6	20	28	2.080784e-07	6.935946e-07	9.710324e-07	-6.012766e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A0DG-01A-21D-A12Q-09	24	24	0	22	0	coding only	1	28835288	...	2	21	24	6.935946e-08	7.282743e-07	8.323135e-07	-6.079713e+00	...	1	28779097	...	3.474744e-08
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TCGA-BH-A0EB-01A-11W-A050-09	34	34	0	26	0	coding only	1	28835288	...	8	21	33	2.774378e-07	7.282743e-07	1.144431e-06	-5.941410e+00	...	4	28779097	...	1.389898e-07
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TCGA-BH-A0HA-01A-11D-A12Q-09	276	269	7	213	2.536232e-02	coding only	1	28835288	...	54	155	273	1.872705e-06	5.375358e-06	9.467566e-06	-5.023762e+00	...	57	28779097	...	1.980604e-06
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TCGA-BH-A0HF-01A-11W-A071-09	855	845	10	555	1.169591e-02	coding only	1	28835288	...	290	527	854	1.005712e-05	1.827622e-05	2.961649e-05	-4.528466e+00	...	27	28779097	...	9.381809e-07
TCGA-BH-A0HI-01A-11D-A099-09	23	23	0	20	0	coding only	1	28835288	...	3	15	21	1.040392e-07	5.201959e-07	7.282743e-07	-6.137705e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0HK-01A-11W-A071-09	101	99	2	73	1.980198e-02	coding only	1	28835288	...	26	61	101	9.016730e-07	2.115464e-06	3.502653e-06	-5.455603e+00	...	12	28779097	...	4.169693e-07
TCGA-BH-A0HL-01A-11W-A050-09	34	34	0	27	0	coding only	1	28835288	...	7	16	34	2.427581e-07	5.548757e-07	1.179111e-06	-5.928445e+00	...	11	28779097	...	3.822219e-07
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TCGA-BH-A0HO-01A-11W-A050-09	21	20	1	14	4.761905e-02	coding only	1	28835288	...	6	10	21	2.080784e-07	3.467973e-07	7.282743e-07	-6.137705e+00	...	4	28779097	...	1.389898e-07
TCGA-BH-A0HP-01A-12D-A099-09	231	228	3	167	1.298701e-02	coding only	1	28835288	...	60	161	226	2.080784e-06	5.583437e-06	7.837619e-06	-5.105816e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0HQ-01A-11W-A050-09	30	30	0	23	0	coding only	1	28835288	...	7	13	30	2.427581e-07	4.508365e-07	1.040392e-06	-5.982803e+00	...	10	28779097	...	3.474744e-07
TCGA-BH-A0HU-01A-11W-A050-09	31	30	1	24	3.225806e-02	coding only	1	28835288	...	5	22	29	1.733986e-07	7.629541e-07	1.005712e-06	-5.997526e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A0HW-01A-11W-A050-09	38	37	1	28	2.631579e-02	coding only	1	28835288	...	9	19	38	3.121176e-07	6.589149e-07	1.317830e-06	-5.880141e+00	...	9	28779097	...	3.127270e-07
TCGA-BH-A0HX-01A-21W-A071-09	55	55	0	44	0	coding only	1	28835288	...	11	34	55	3.814770e-07	1.179111e-06	1.907385e-06	-5.719562e+00	...	10	28779097	...	3.474744e-07
TCGA-BH-A0HY-01A-11W-A071-09	50	50	0	39	0	coding only	1	28835288	...	11	34	50	3.814770e-07	1.179111e-06	1.733986e-06	-5.760954e+00	...	5	28779097	...	1.737372e-07
TCGA-BH-A0RX-01A-21D-A099-09	17	17	0	14	0	coding only	1	28835288	...	3	11	17	1.040392e-07	3.814770e-07	5.895554e-07	-6.229475e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A0W3-01A-11D-A10G-09	18	18	0	12	0	coding only	1	28835288	...	6	10	18	2.080784e-07	3.467973e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0W4-01A-11D-A10G-09	27	27	0	23	0	coding only	1	28835288	...	4	21	27	1.387189e-07	7.282743e-07	9.363527e-07	-6.028561e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0W5-01A-11D-A10G-09	24	24	0	21	0	coding only	1	28835288	...	3	19	24	1.040392e-07	6.589149e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A0W7-01A-11D-A10Y-09	171	166	5	115	2.923977e-02	coding only	1	28835288	...	49	113	167	1.699307e-06	3.918809e-06	5.791515e-06	-5.237208e+00	...	0	28779097	...	0
TCGA-BH-A0WA-01A-11D-A10G-09	83	80	3	66	3.614458e-02	coding only	1	28835288	...	14	64	83	4.855162e-07	2.219503e-06	2.878418e-06	-5.540846e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A18F-01A-11D-A12B-09	50	49	1	35	2.000000e-02	coding only	1	28835288	...	14	31	50	4.855162e-07	1.075072e-06	1.733986e-06	-5.760954e+00	...	4	28779097	...	1.389898e-07
TCGA-BH-A18G-01A-11D-A12B-09	1332	1311	21	1010	1.576577e-02	coding only	1	28835288	...	299	810	1316	1.036924e-05	2.809058e-05	4.563852e-05	-4.340668e+00	...	186	28779097	...	6.463024e-06
TCGA-BH-A18H-01A-11D-A12B-09	29	29	0	24	0	coding only	1	28835288	...	5	23	29	1.733986e-07	7.976338e-07	1.005712e-06	-5.997526e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A18I-01A-11D-A12B-09	23	22	1	19	4.347826e-02	coding only	1	28835288	...	3	16	23	1.040392e-07	5.548757e-07	7.976338e-07	-6.098196e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A18J-01A-11D-A12B-09	59	57	2	44	3.389831e-02	coding only	1	28835288	...	13	44	59	4.508365e-07	1.525908e-06	2.046104e-06	-5.689072e+00	...	0	28779097	...	0
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TCGA-BH-A18L-01A-32D-A12B-09	37	35	2	26	5.405405e-02	coding only	1	28835288	...	9	24	37	3.121176e-07	8.323135e-07	1.283150e-06	-5.891723e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A18M-01A-11D-A12B-09	12	12	0	11	0	coding only	1	28835288	...	1	9	12	3.467973e-08	3.121176e-07	4.161568e-07	-6.380743e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A18N-01A-11D-A12B-09	31	31	0	24	0	coding only	1	28835288	...	7	21	31	2.427581e-07	7.282743e-07	1.075072e-06	-5.968563e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A18P-01A-11D-A12B-09	306	301	5	219	1.633987e-02	coding only	1	28835288	...	80	213	303	2.774378e-06	7.386782e-06	1.050796e-05	-4.978482e+00	...	5	28779097	...	1.737372e-07
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TCGA-BH-A18R-01A-11D-A12B-09	25	25	0	18	0	coding only	1	28835288	...	7	14	23	2.427581e-07	4.855162e-07	7.976338e-07	-6.098196e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A18S-01A-11D-A12B-09	24	23	1	17	4.166667e-02	coding only	1	28835288	...	6	16	24	2.080784e-07	5.548757e-07	8.323135e-07	-6.079713e+00	...	1	28779097	...	3.474744e-08
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TCGA-BH-A18U-01A-21D-A12B-09	92	91	1	61	1.086957e-02	coding only	1	28835288	...	30	56	92	1.040392e-06	1.942065e-06	3.190535e-06	-5.496136e+00	...	5	28779097	...	1.737372e-07
TCGA-BH-A18V-01A-11D-A12B-09	173	170	3	130	1.734104e-02	coding only	1	28835288	...	40	126	171	1.387189e-06	4.369646e-06	5.930234e-06	-5.226928e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A1EN-01A-11D-A17G-09	46	44	2	31	4.347826e-02	coding only	1	28835288	...	13	29	46	4.508365e-07	1.005712e-06	1.595268e-06	-5.797166e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A1EO-01A-11D-A135-09	30	30	0	27	0	coding only	1	28835288	...	3	25	30	1.040392e-07	8.669932e-07	1.040392e-06	-5.982803e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A1ES-01A-11D-A135-09	16	16	0	15	0	coding only	1	28835288	...	1	13	15	3.467973e-08	4.508365e-07	5.201959e-07	-6.283833e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A1ET-01A-11D-A135-09	23	23	0	17	0	coding only	1	28835288	...	6	16	22	2.080784e-07	5.548757e-07	7.629541e-07	-6.117502e+00	...	0	28779097	...	0
TCGA-BH-A1EU-01A-11D-A135-09	16	16	0	13	0	coding only	1	28835288	...	3	11	16	1.040392e-07	3.814770e-07	5.548757e-07	-6.255804e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A1EV-01A-11D-A135-09	80	80	0	63	0	coding only	1	28835288	...	17	62	80	5.895554e-07	2.150143e-06	2.774378e-06	-5.556834e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A1EW-01A-11D-A135-09	11	10	1	8	9.090909e-02	coding only	1	28835288	...	2	7	10	6.935946e-08	2.427581e-07	3.467973e-07	-6.459924e+00	...	0	28779097	...	0
TCGA-BH-A1EX-01A-11D-A13L-09	12	12	0	11	0	coding only	1	28835288	...	1	11	12	3.467973e-08	3.814770e-07	4.161568e-07	-6.380743e+00	...	0	28779097	...	0
TCGA-BH-A1EY-01A-11D-A13L-09	43	42	1	27	2.325581e-02	coding only	1	28835288	...	15	27	43	5.201959e-07	9.363527e-07	1.491228e-06	-5.826456e+00	...	0	28779097	...	0
TCGA-BH-A1F0-01A-11D-A135-09	21	21	0	15	0	coding only	1	28835288	...	5	14	20	1.733986e-07	4.855162e-07	6.935946e-07	-6.158894e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A1F2-01A-31D-A13L-09	44	44	0	31	0	coding only	1	28835288	...	13	29	43	4.508365e-07	1.005712e-06	1.491228e-06	-5.826456e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A1F5-01A-12D-A13L-09	30	30	0	23	0	coding only	1	28835288	...	7	21	29	2.427581e-07	7.282743e-07	1.005712e-06	-5.997526e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A1F6-01A-11D-A13L-09	64	64	0	44	0	coding only	1	28835288	...	20	28	64	6.935946e-07	9.710324e-07	2.219503e-06	-5.653744e+00	...	16	28779097	...	5.559591e-07
TCGA-BH-A1F8-01A-11D-A13L-09	134	130	4	101	2.985075e-02	coding only	1	28835288	...	29	93	129	1.005712e-06	3.225215e-06	4.473685e-06	-5.349335e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A1FC-01A-11D-A13L-09	71	70	1	59	1.408451e-02	coding only	1	28835288	...	11	55	70	3.814770e-07	1.907385e-06	2.427581e-06	-5.614826e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A1FD-01A-11W-A14Q-09	27	26	1	21	3.703704e-02	coding only	1	28835288	...	5	16	25	1.733986e-07	5.548757e-07	8.669932e-07	-6.061984e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A1FE-01A-11D-A13L-09	11	11	0	10	0	coding only	1	28835288	...	1	9	11	3.467973e-08	3.121176e-07	3.814770e-07	-6.418532e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A1FG-01A-11D-A13L-09	17	17	0	13	0	coding only	1	28835288	...	4	12	17	1.387189e-07	4.161568e-07	5.895554e-07	-6.229475e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A1FH-01A-12D-A13L-09	4	4	0	2	0	coding only	1	28835288	...	2	1	4	6.935946e-08	3.467973e-08	1.387189e-07	-6.857864e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A1FJ-01A-11D-A13L-09	27	26	1	18	3.703704e-02	coding only	1	28835288	...	8	16	27	2.774378e-07	5.548757e-07	9.363527e-07	-6.028561e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A1FL-01A-11D-A13L-09	22	22	0	19	0	coding only	1	28835288	...	3	16	22	1.040392e-07	5.548757e-07	7.629541e-07	-6.117502e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A1FM-01A-11D-A13L-09	35	35	0	30	0	coding only	1	28835288	...	5	28	35	1.733986e-07	9.710324e-07	1.213791e-06	-5.915856e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A1FN-01A-11D-A13L-09	108	107	1	84	9.259259e-03	coding only	1	28835288	...	23	77	105	7.976338e-07	2.670339e-06	3.641372e-06	-5.438735e+00	...	4	28779097	...	1.389898e-07
TCGA-BH-A1FR-01A-11D-A13L-09	11	11	0	10	0	coding only	1	28835288	...	1	9	10	3.467973e-08	3.121176e-07	3.467973e-07	-6.459924e+00	...	0	28779097	...	0
TCGA-BH-A1FU-01A-11D-A14G-09	27	27	0	21	0	coding only	1	28835288	...	6	20	27	2.080784e-07	6.935946e-07	9.363527e-07	-6.028561e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A201-01A-11D-A14K-09	16	16	0	14	0	coding only	1	28835288	...	2	14	16	6.935946e-08	4.855162e-07	5.548757e-07	-6.255804e+00	...	0	28779097	...	0
TCGA-BH-A202-01A-11D-A14K-09	27	27	0	23	0	coding only	1	28835288	...	4	20	27	1.387189e-07	6.935946e-07	9.363527e-07	-6.028561e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A203-01A-12D-A167-09	58	58	0	37	0	coding only	1	28835288	...	21	36	58	7.282743e-07	1.248470e-06	2.011424e-06	-5.696496e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A204-01A-11D-A159-09	39	37	2	31	5.128205e-02	coding only	1	28835288	...	6	25	36	2.080784e-07	8.669932e-07	1.248470e-06	-5.903622e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A208-01A-11D-A159-09	55	53	2	43	3.636364e-02	coding only	1	28835288	...	10	40	55	3.467973e-07	1.387189e-06	1.907385e-06	-5.719562e+00	...	3	28779097	...	1.042423e-07
TCGA-BH-A209-01A-11D-A17G-09	74	74	0	55	0	coding only	1	28835288	...	19	47	71	6.589149e-07	1.629947e-06	2.462261e-06	-5.608666e+00	...	5	28779097	...	1.737372e-07
TCGA-BH-A28O-01A-11D-A228-09	14	14	0	10	0	coding only	1	28835288	...	4	10	14	1.387189e-07	3.467973e-07	4.855162e-07	-6.313796e+00	...	0	28779097	...	0
TCGA-BH-A28Q-01A-11D-A16D-09	22	22	0	15	0	coding only	1	28835288	...	6	15	21	2.080784e-07	5.201959e-07	7.282743e-07	-6.137705e+00	...	0	28779097	...	0
TCGA-BH-A2L8-01A-11D-A18P-09	407	399	8	287	1.965602e-02	coding only	1	28835288	...	110	277	396	3.814770e-06	9.606285e-06	1.373317e-05	-4.862229e+00	...	2	28779097	...	6.949488e-08
TCGA-BH-A42T-01A-11D-A243-09	31	30	1	23	3.225806e-02	coding only	1	28835288	...	7	21	29	2.427581e-07	7.282743e-07	1.005712e-06	-5.997526e+00	...	0	28779097	...	0
TCGA-BH-A42U-01A-12D-A243-09	10	10	0	8	0	coding only	1	28835288	...	1	5	6	3.467973e-08	1.733986e-07	2.080784e-07	-6.681773e+00	...	0	28779097	...	0
TCGA-BH-A42V-01A-11D-A243-09	34	34	0	30	0	coding only	1	28835288	...	3	28	32	1.040392e-07	9.710324e-07	1.109751e-06	-5.954774e+00	...	1	28779097	...	3.474744e-08
TCGA-BH-A5IZ-01A-11D-A27P-09	73	73	0	57	0	coding only	1	28835288	...	15	52	71	5.201959e-07	1.803346e-06	2.462261e-06	-5.608666e+00	...	4	28779097	...	1.389898e-07
TCGA-BH-A5J0-01A-11D-A27P-09	60	58	2	49	3.333333e-02	coding only	1	28835288	...	9	46	59	3.121176e-07	1.595268e-06	2.046104e-06	-5.689072e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A12K-01A-21D-A10Y-09	105	103	2	77	1.904762e-02	coding only	1	28835288	...	26	73	105	9.016730e-07	2.531620e-06	3.641372e-06	-5.438735e+00	...	4	28779097	...	1.389898e-07
TCGA-C8-A12L-01A-11D-A10Y-09	70	67	3	56	4.285714e-02	coding only	1	28835288	...	11	51	70	3.814770e-07	1.768666e-06	2.427581e-06	-5.614826e+00	...	5	28779097	...	1.737372e-07
TCGA-C8-A12M-01A-11D-A135-09	54	52	2	42	3.703704e-02	coding only	1	28835288	...	10	36	53	3.467973e-07	1.248470e-06	1.838026e-06	-5.735648e+00	...	5	28779097	...	1.737372e-07
TCGA-C8-A12N-01A-11D-A10Y-09	23	23	0	15	0	coding only	1	28835288	...	8	12	23	2.774378e-07	4.161568e-07	7.976338e-07	-6.098196e+00	...	3	28779097	...	1.042423e-07
TCGA-C8-A12O-01A-11D-A10Y-09	29	28	1	24	3.448276e-02	coding only	1	28835288	...	4	23	28	1.387189e-07	7.976338e-07	9.710324e-07	-6.012766e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A12P-01A-11D-A10Y-09	151	146	5	112	3.311258e-02	exome+100bp flanks	2	35791301	...	34	107	151	9.499515e-07	2.989553e-06	4.218902e-06	-5.374801e+00	...	5	32078719	...	1.558666e-07
TCGA-C8-A12Q-01A-11D-A10Y-09	98	96	2	73	2.040816e-02	coding only	1	28835288	...	22	72	97	7.629541e-07	2.496941e-06	3.363934e-06	-5.473153e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A12T-01A-11D-A10Y-09	150	148	2	119	1.333333e-02	coding only	1	28835288	...	28	114	145	9.710324e-07	3.953489e-06	5.028561e-06	-5.298556e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A12U-01A-11D-A10Y-09	34	34	0	27	0	coding only	1	28835288	...	7	24	33	2.427581e-07	8.323135e-07	1.144431e-06	-5.941410e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A12V-01A-11D-A10Y-09	15	13	2	11	1.333333e-01	coding only	1	28835288	...	2	11	15	6.935946e-08	3.814770e-07	5.201959e-07	-6.283833e+00	...	0	28779097	...	0
TCGA-C8-A12W-01A-11D-A10Y-09	44	43	1	34	2.272727e-02	coding only	1	28835288	...	9	32	44	3.121176e-07	1.109751e-06	1.525908e-06	-5.816472e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A12X-01A-11D-A10Y-09	42	42	0	32	0	coding only	1	28835288	...	10	31	42	3.467973e-07	1.075072e-06	1.456549e-06	-5.836675e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A12Y-01A-11D-A12B-09	31	29	2	20	6.451613e-02	coding only	1	28835288	...	9	20	31	3.121176e-07	6.935946e-07	1.075072e-06	-5.968563e+00	...	0	28779097	...	0
TCGA-C8-A12Z-01A-11D-A10Y-09	47	47	0	37	0	coding only	1	28835288	...	9	35	46	3.121176e-07	1.213791e-06	1.595268e-06	-5.797166e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A130-01A-31D-A10Y-09	36	36	0	23	0	coding only	1	28835288	...	13	20	34	4.508365e-07	6.935946e-07	1.179111e-06	-5.928445e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A131-01A-11D-A10Y-09	52	49	3	37	5.769231e-02	coding only	1	28835288	...	12	32	52	4.161568e-07	1.109751e-06	1.803346e-06	-5.743921e+00	...	5	28779097	...	1.737372e-07
TCGA-C8-A132-01A-31D-A10Y-09	49	49	0	38	0	coding only	1	28835288	...	11	35	49	3.814770e-07	1.213791e-06	1.699307e-06	-5.769728e+00	...	3	28779097	...	1.042423e-07
TCGA-C8-A133-01A-32D-A12B-09	22	22	0	17	0	coding only	1	28835288	...	5	15	21	1.733986e-07	5.201959e-07	7.282743e-07	-6.137705e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A134-01A-11D-A10Y-09	93	90	3	70	3.225806e-02	coding only	1	28835288	...	19	65	91	6.589149e-07	2.254182e-06	3.155855e-06	-5.500883e+00	...	4	28779097	...	1.389898e-07
TCGA-C8-A135-01A-11D-A10Y-09	47	44	3	35	6.382979e-02	coding only	1	28835288	...	9	31	46	3.121176e-07	1.075072e-06	1.595268e-06	-5.797166e+00	...	3	28779097	...	1.042423e-07
TCGA-C8-A137-01A-11D-A10Y-09	46	45	1	36	2.173913e-02	coding only	1	28835288	...	9	32	42	3.121176e-07	1.109751e-06	1.456549e-06	-5.836675e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A138-01A-11D-A10Y-09	46	43	3	34	6.521739e-02	coding only	1	28835288	...	9	29	46	3.121176e-07	1.005712e-06	1.595268e-06	-5.797166e+00	...	5	28779097	...	1.737372e-07
TCGA-C8-A1HE-01A-11D-A188-09	38	38	0	28	0	coding only	1	28835288	...	10	28	38	3.467973e-07	9.710324e-07	1.317830e-06	-5.880141e+00	...	0	28779097	...	0
TCGA-C8-A1HF-01A-11D-A135-09	32	28	4	21	1.250000e-01	coding only	1	28835288	...	7	20	32	2.427581e-07	6.935946e-07	1.109751e-06	-5.954774e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A1HG-01A-11D-A135-09	43	40	3	24	6.976744e-02	coding only	1	28835288	...	16	22	43	5.548757e-07	7.629541e-07	1.491228e-06	-5.826456e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A1HI-01A-11D-A135-09	36	34	2	25	5.555556e-02	coding only	1	28835288	...	9	23	36	3.121176e-07	7.976338e-07	1.248470e-06	-5.903622e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A1HJ-01A-11D-A13L-09	108	107	1	84	9.259259e-03	coding only	1	28835288	...	23	71	107	7.976338e-07	2.462261e-06	3.710731e-06	-5.430541e+00	...	12	28779097	...	4.169693e-07
TCGA-C8-A1HK-01A-21D-A13L-09	49	49	0	40	0	coding only	1	28835288	...	9	38	49	3.121176e-07	1.317830e-06	1.699307e-06	-5.769728e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A1HL-01A-11D-A135-09	28	28	0	21	0	coding only	1	28835288	...	6	19	27	2.080784e-07	6.589149e-07	9.363527e-07	-6.028561e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A1HM-01A-12D-A135-09	294	286	8	224	2.721088e-02	coding only	1	28835288	...	60	217	288	2.080784e-06	7.525501e-06	9.987762e-06	-5.000532e+00	...	3	28779097	...	1.042423e-07
TCGA-C8-A1HN-01A-11D-A135-09	48	47	1	33	2.083333e-02	coding only	1	28835288	...	13	28	47	4.508365e-07	9.710324e-07	1.629947e-06	-5.787826e+00	...	5	28779097	...	1.737372e-07
TCGA-C8-A1HO-01A-11D-A13L-09	24	24	0	16	0	coding only	1	28835288	...	8	14	24	2.774378e-07	4.855162e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A26V-01A-11D-A16D-09	74	74	0	55	0	coding only	1	28835288	...	18	53	72	6.242351e-07	1.838026e-06	2.496941e-06	-5.602592e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A26W-01A-11D-A16D-09	50	50	0	37	0	coding only	1	28835288	...	13	36	50	4.508365e-07	1.248470e-06	1.733986e-06	-5.760954e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A26X-01A-31D-A16D-09	43	43	0	37	0	coding only	1	28835288	...	6	31	43	2.080784e-07	1.075072e-06	1.491228e-06	-5.826456e+00	...	6	28779097	...	2.084847e-07
TCGA-C8-A26Y-01A-11D-A16D-09	676	661	15	512	2.218935e-02	coding only	1	28835288	...	149	492	668	5.167280e-06	1.706243e-05	2.316606e-05	-4.635148e+00	...	14	28779097	...	4.864642e-07
TCGA-C8-A26Z-01A-11D-A16D-09	39	38	1	34	2.564103e-02	coding only	1	28835288	...	4	31	39	1.387189e-07	1.075072e-06	1.352509e-06	-5.868860e+00	...	3	28779097	...	1.042423e-07
TCGA-C8-A273-01A-11D-A16D-09	18	17	1	12	5.555556e-02	coding only	1	28835288	...	5	11	18	1.733986e-07	3.814770e-07	6.242351e-07	-6.204652e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A274-01A-11D-A16D-09	185	180	5	132	2.702703e-02	coding only	1	28835288	...	47	126	184	1.629947e-06	4.369646e-06	6.381070e-06	-5.195106e+00	...	6	28779097	...	2.084847e-07
TCGA-C8-A275-01A-21D-A16D-09	119	116	3	86	2.521008e-02	coding only	1	28835288	...	30	82	117	1.040392e-06	2.843738e-06	4.057528e-06	-5.391738e+00	...	2	28779097	...	6.949488e-08
TCGA-C8-A278-01A-11D-A167-09	25	25	0	21	0	coding only	1	28835288	...	4	20	24	1.387189e-07	6.935946e-07	8.323135e-07	-6.079713e+00	...	0	28779097	...	0
TCGA-C8-A27A-01A-11D-A167-09	22	22	0	17	0	coding only	1	28835288	...	5	17	22	1.733986e-07	5.895554e-07	7.629541e-07	-6.117502e+00	...	0	28779097	...	0
TCGA-C8-A27B-01A-11D-A167-09	133	133	0	108	0	coding only	1	28835288	...	25	103	131	8.669932e-07	3.572012e-06	4.543045e-06	-5.342653e+00	...	3	28779097	...	1.042423e-07
TCGA-C8-A3M7-01A-12D-A21Q-09	149	147	2	110	1.342282e-02	coding only	1	28835288	...	37	109	149	1.283150e-06	3.780091e-06	5.167280e-06	-5.286738e+00	...	1	28779097	...	3.474744e-08
TCGA-C8-A3M8-01A-11D-A20S-09	47	46	1	39	2.127660e-02	coding only	1	28835288	...	6	33	45	2.080784e-07	1.144431e-06	1.560588e-06	-5.806712e+00	...	5	28779097	...	1.737372e-07
TCGA-D8-A13Y-01A-11D-A10Y-09	64	64	0	47	0	coding only	1	28835288	...	16	44	63	5.548757e-07	1.525908e-06	2.184823e-06	-5.660584e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A13Z-01A-11D-A10Y-09	62	60	2	52	3.225806e-02	coding only	1	28835288	...	8	49	61	2.774378e-07	1.699307e-06	2.115464e-06	-5.674594e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A140-01A-11D-A10Y-09	87	85	2	66	2.298851e-02	coding only	1	28835288	...	18	60	86	6.242351e-07	2.080784e-06	2.982457e-06	-5.525426e+00	...	6	28779097	...	2.084847e-07
TCGA-D8-A141-01A-11D-A10Y-09	16	15	1	12	6.250000e-02	coding only	1	28835288	...	3	11	16	1.040392e-07	3.814770e-07	5.548757e-07	-6.255804e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A142-01A-11D-A10Y-09	62	59	3	41	4.838710e-02	coding only	1	28835288	...	18	39	61	6.242351e-07	1.352509e-06	2.115464e-06	-5.674594e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A143-01A-11D-A10Y-09	41	41	0	35	0	coding only	1	28835288	...	6	28	39	2.080784e-07	9.710324e-07	1.352509e-06	-5.868860e+00	...	5	28779097	...	1.737372e-07
TCGA-D8-A145-01A-11D-A10Y-09	26	25	1	19	3.846154e-02	coding only	1	28835288	...	6	16	26	2.080784e-07	5.548757e-07	9.016730e-07	-6.044951e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A146-01A-31D-A10Y-09	28	28	0	24	0	coding only	1	28835288	...	4	23	28	1.387189e-07	7.976338e-07	9.710324e-07	-6.012766e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A147-01A-11D-A10Y-09	115	114	1	89	8.695652e-03	coding only	1	28835288	...	24	84	113	8.323135e-07	2.913097e-06	3.918809e-06	-5.406846e+00	...	4	28779097	...	1.389898e-07
TCGA-D8-A1J8-01A-11D-A13L-09	712	704	8	534	1.123596e-02	coding only	1	28835288	...	170	484	701	5.895554e-06	1.678499e-05	2.431049e-05	-4.614206e+00	...	39	28779097	...	1.355150e-06
TCGA-D8-A1J9-01A-11D-A13L-09	159	155	4	113	2.515723e-02	coding only	1	28835288	...	42	111	158	1.456549e-06	3.849450e-06	5.479397e-06	-5.261267e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1JA-01A-11D-A13L-09	910	893	17	678	1.868132e-02	coding only	1	28835288	...	214	658	898	7.421462e-06	2.281926e-05	3.114240e-05	-4.506648e+00	...	10	28779097	...	3.474744e-07
TCGA-D8-A1JB-01A-11D-A13L-09	22	22	0	18	0	coding only	1	28835288	...	4	18	22	1.387189e-07	6.242351e-07	7.629541e-07	-6.117502e+00	...	0	28779097	...	0
TCGA-D8-A1JC-01A-11D-A13L-09	76	75	1	55	1.315789e-02	coding only	1	28835288	...	19	54	75	6.589149e-07	1.872705e-06	2.600980e-06	-5.584863e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1JD-01A-11D-A13L-09	75	73	2	61	2.666667e-02	coding only	1	28835288	...	11	56	71	3.814770e-07	1.942065e-06	2.462261e-06	-5.608666e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1JE-01A-11D-A13L-09	32	31	1	26	3.125000e-02	coding only	1	28835288	...	5	25	32	1.733986e-07	8.669932e-07	1.109751e-06	-5.954774e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1JF-01A-11D-A13L-09	40	40	0	34	0	coding only	1	28835288	...	6	28	40	2.080784e-07	9.710324e-07	1.387189e-06	-5.857864e+00	...	6	28779097	...	2.084847e-07
TCGA-D8-A1JG-01B-11D-A13L-09	105	104	1	83	9.523810e-03	coding only	1	28835288	...	21	78	103	7.282743e-07	2.705019e-06	3.572012e-06	-5.447087e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A1JH-01A-11D-A188-09	18	17	1	14	5.555556e-02	coding only	1	28835288	...	3	12	18	1.040392e-07	4.161568e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1JI-01A-11D-A13L-09	33	32	1	21	3.030303e-02	coding only	1	28835288	...	11	18	33	3.814770e-07	6.242351e-07	1.144431e-06	-5.941410e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A1JJ-01A-31D-A14K-09	65	65	0	44	0	coding only	1	28835288	...	21	43	64	7.282743e-07	1.491228e-06	2.219503e-06	-5.653744e+00	...	0	28779097	...	0
TCGA-D8-A1JK-01A-11D-A13L-09	172	170	2	128	1.162791e-02	coding only	1	28835288	...	41	111	169	1.421869e-06	3.849450e-06	5.860874e-06	-5.232038e+00	...	15	28779097	...	5.212116e-07
TCGA-D8-A1JL-01A-11D-A13L-09	102	101	1	73	9.803922e-03	coding only	1	28835288	...	25	70	98	8.669932e-07	2.427581e-06	3.398614e-06	-5.468698e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1JM-01A-11D-A13L-09	41	41	0	28	0	coding only	1	28835288	...	13	24	39	4.508365e-07	8.323135e-07	1.352509e-06	-5.868860e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1JN-01A-11D-A13L-09	163	155	8	104	4.907975e-02	exome+100bp flanks	2	35791301	...	51	102	163	1.424927e-06	2.849854e-06	4.554179e-06	-5.341590e+00	...	2	32078719	...	6.234663e-08
TCGA-D8-A1JP-01A-11D-A13L-09	102	100	2	80	1.960784e-02	coding only	1	28835288	...	20	75	100	6.935946e-07	2.600980e-06	3.467973e-06	-5.459924e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A1JS-01A-11D-A13L-09	21	21	0	14	0	coding only	1	28835288	...	6	13	20	2.080784e-07	4.508365e-07	6.935946e-07	-6.158894e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1JT-01A-31D-A13L-09	32	32	0	25	0	coding only	1	28835288	...	7	21	32	2.427581e-07	7.282743e-07	1.109751e-06	-5.954774e+00	...	4	28779097	...	1.389898e-07
TCGA-D8-A1JU-01A-11D-A13L-09	12	12	0	7	0	coding only	1	28835288	...	5	5	12	1.733986e-07	1.733986e-07	4.161568e-07	-6.380743e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1X5-01A-11D-A14G-09	47	46	1	29	2.127660e-02	coding only	1	28835288	...	17	26	47	5.895554e-07	9.016730e-07	1.629947e-06	-5.787826e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A1X6-01A-11D-A14K-09	37	37	0	33	0	coding only	1	28835288	...	4	28	36	1.387189e-07	9.710324e-07	1.248470e-06	-5.903622e+00	...	4	28779097	...	1.389898e-07
TCGA-D8-A1X7-01A-11D-A14K-09	24	23	1	20	4.166667e-02	coding only	1	28835288	...	3	20	23	1.040392e-07	6.935946e-07	7.976338e-07	-6.098196e+00	...	0	28779097	...	0
TCGA-D8-A1X8-01A-11D-A14K-09	25	24	1	16	4.000000e-02	coding only	1	28835288	...	8	15	25	2.774378e-07	5.201959e-07	8.669932e-07	-6.061984e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1X9-01A-12D-A159-09	85	83	2	65	2.352941e-02	coding only	1	28835288	...	17	62	83	5.895554e-07	2.150143e-06	2.878418e-06	-5.540846e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1XA-01A-11D-A14G-09	26	26	0	22	0	coding only	1	28835288	...	4	16	26	1.387189e-07	5.548757e-07	9.016730e-07	-6.044951e+00	...	6	28779097	...	2.084847e-07
TCGA-D8-A1XB-01A-11D-A14G-09	29	28	1	22	3.448276e-02	coding only	1	28835288	...	6	20	28	2.080784e-07	6.935946e-07	9.710324e-07	-6.012766e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1XC-01A-11D-A14G-09	28	28	0	23	0	coding only	1	28835288	...	4	23	27	1.387189e-07	7.976338e-07	9.363527e-07	-6.028561e+00	...	0	28779097	...	0
TCGA-D8-A1XF-01A-11D-A14G-09	38	37	1	27	2.631579e-02	coding only	1	28835288	...	10	25	38	3.467973e-07	8.669932e-07	1.317830e-06	-5.880141e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1XG-01A-11D-A14G-09	24	24	0	17	0	coding only	1	28835288	...	7	14	24	2.427581e-07	4.855162e-07	8.323135e-07	-6.079713e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A1XJ-01A-11D-A14K-09	77	76	1	58	1.298701e-02	coding only	1	28835288	...	18	51	76	6.242351e-07	1.768666e-06	2.635659e-06	-5.579111e+00	...	6	28779097	...	2.084847e-07
TCGA-D8-A1XK-01A-21D-A14K-09	919	903	16	696	1.741023e-02	coding only	1	28835288	...	204	614	909	7.074665e-06	2.129335e-05	3.152387e-05	-4.501360e+00	...	75	28779097	...	2.606058e-06
TCGA-D8-A1XL-01A-11D-A14K-09	87	87	0	78	0	coding only	1	28835288	...	8	73	86	2.774378e-07	2.531620e-06	2.982457e-06	-5.525426e+00	...	5	28779097	...	1.737372e-07
TCGA-D8-A1XM-01A-21D-A14K-09	51	50	1	36	1.960784e-02	coding only	1	28835288	...	13	35	49	4.508365e-07	1.213791e-06	1.699307e-06	-5.769728e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1XO-01A-11D-A14K-09	17	17	0	11	0	coding only	1	28835288	...	6	11	17	2.080784e-07	3.814770e-07	5.895554e-07	-6.229475e+00	...	0	28779097	...	0
TCGA-D8-A1XQ-01A-11D-A14K-09	706	698	8	542	1.133144e-02	coding only	1	28835288	...	153	441	692	5.305999e-06	1.529376e-05	2.399837e-05	-4.619818e+00	...	89	28779097	...	3.092522e-06
TCGA-D8-A1XR-01A-11D-A14K-09	23	23	0	20	0	coding only	1	28835288	...	3	19	23	1.040392e-07	6.589149e-07	7.976338e-07	-6.098196e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1XS-01A-11D-A14K-09	20	19	1	10	5.000000e-02	coding only	1	28835288	...	8	9	19	2.774378e-07	3.121176e-07	6.589149e-07	-6.181171e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1XT-01A-11D-A14K-09	43	42	1	34	2.325581e-02	coding only	1	28835288	...	8	32	43	2.774378e-07	1.109751e-06	1.491228e-06	-5.826456e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1XU-01A-11D-A14K-09	26	26	0	15	0	coding only	1	28835288	...	10	13	24	3.467973e-07	4.508365e-07	8.323135e-07	-6.079713e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1XV-01A-11D-A14K-09	27	26	1	19	3.703704e-02	coding only	1	28835288	...	7	18	27	2.427581e-07	6.242351e-07	9.363527e-07	-6.028561e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A1XW-01A-11D-A14K-09	84	80	4	63	4.761905e-02	coding only	1	28835288	...	17	59	83	5.895554e-07	2.046104e-06	2.878418e-06	-5.540846e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A1XY-01A-11D-A14K-09	39	38	1	26	2.564103e-02	coding only	1	28835288	...	12	23	38	4.161568e-07	7.976338e-07	1.317830e-06	-5.880141e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1XZ-01A-11D-A14K-09	59	59	0	48	0	coding only	1	28835288	...	11	42	57	3.814770e-07	1.456549e-06	1.976745e-06	-5.704049e+00	...	4	28779097	...	1.389898e-07
TCGA-D8-A1Y0-01A-11D-A14K-09	61	59	2	44	3.278689e-02	coding only	1	28835288	...	15	42	61	5.201959e-07	1.456549e-06	2.115464e-06	-5.674594e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A1Y1-01A-21D-A14K-09	190	190	0	144	0	coding only	1	28835288	...	46	108	186	1.595268e-06	3.745411e-06	6.450430e-06	-5.190411e+00	...	32	28779097	...	1.111918e-06
TCGA-D8-A1Y2-01A-11D-A159-09	23	21	2	17	8.695652e-02	coding only	1	28835288	...	4	14	23	1.387189e-07	4.855162e-07	7.976338e-07	-6.098196e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A1Y3-01A-11D-A159-09	50	50	0	38	0	coding only	1	28835288	...	12	36	49	4.161568e-07	1.248470e-06	1.699307e-06	-5.769728e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A27E-01A-11D-A16D-09	8	8	0	8	0	coding only	1	28835288	...	0	8	8	0	2.774378e-07	2.774378e-07	-6.556834e+00	...	0	28779097	...	0
TCGA-D8-A27F-01A-11D-A16D-09	53	52	1	40	1.886792e-02	coding only	1	28835288	...	11	37	51	3.814770e-07	1.283150e-06	1.768666e-06	-5.752354e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A27G-01A-11D-A16D-09	913	898	15	704	1.642935e-02	coding only	1	28835288	...	193	689	902	6.693188e-06	2.389433e-05	3.128112e-05	-4.504718e+00	...	5	28779097	...	1.737372e-07
TCGA-D8-A27H-01A-11D-A16D-09	110	105	5	86	4.545455e-02	exome+100bp flanks	2	35791301	...	19	83	107	5.308552e-07	2.318999e-06	2.989553e-06	-5.524394e+00	...	1	32078719	...	3.117331e-08
TCGA-D8-A27I-01A-11D-A16D-09	32	32	0	26	0	coding only	1	28835288	...	6	21	31	2.080784e-07	7.282743e-07	1.075072e-06	-5.968563e+00	...	4	28779097	...	1.389898e-07
TCGA-D8-A27K-01A-11D-A16D-09	22	22	0	18	0	coding only	1	28835288	...	4	14	22	1.387189e-07	4.855162e-07	7.629541e-07	-6.117502e+00	...	4	28779097	...	1.389898e-07
TCGA-D8-A27L-01A-11D-A16D-09	34	33	1	26	2.941176e-02	coding only	1	28835288	...	6	23	33	2.080784e-07	7.976338e-07	1.144431e-06	-5.941410e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A27M-01A-11D-A16D-09	54	54	0	43	0	coding only	1	28835288	...	11	38	52	3.814770e-07	1.317830e-06	1.803346e-06	-5.743921e+00	...	3	28779097	...	1.042423e-07
TCGA-D8-A27N-01A-11D-A16D-09	44	44	0	37	0	coding only	1	28835288	...	7	33	44	2.427581e-07	1.144431e-06	1.525908e-06	-5.816472e+00	...	4	28779097	...	1.389898e-07
TCGA-D8-A27P-01A-11D-A16D-09	24	23	1	16	4.166667e-02	coding only	1	28835288	...	7	15	24	2.427581e-07	5.201959e-07	8.323135e-07	-6.079713e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A27R-01A-11D-A16D-09	25	24	1	20	4.000000e-02	coding only	1	28835288	...	4	19	25	1.387189e-07	6.589149e-07	8.669932e-07	-6.061984e+00	...	1	28779097	...	3.474744e-08
TCGA-D8-A27T-01A-11D-A16D-09	22	22	0	18	0	coding only	1	28835288	...	4	16	22	1.387189e-07	5.548757e-07	7.629541e-07	-6.117502e+00	...	2	28779097	...	6.949488e-08
TCGA-D8-A27V-01A-12D-A17D-09	206	206	0	156	0	coding only	1	28835288	...	49	152	201	1.699307e-06	5.271319e-06	6.970626e-06	-5.156728e+00	...	0	28779097	...	0
TCGA-D8-A27W-01A-11D-A16D-09	20	19	1	17	5.000000e-02	coding only	1	28835288	...	2	17	20	6.935946e-08	5.895554e-07	6.935946e-07	-6.158894e+00	...	0	28779097	...	0
TCGA-D8-A3Z5-01A-41D-A243-09	21	21	0	13	0	coding only	1	28835288	...	8	7	20	2.774378e-07	2.427581e-07	6.935946e-07	-6.158894e+00	...	5	28779097	...	1.737372e-07
TCGA-D8-A3Z6-01A-11D-A23C-09	30	30	0	22	0	coding only	1	28835288	...	8	17	29	2.774378e-07	5.895554e-07	1.005712e-06	-5.997526e+00	...	4	28779097	...	1.389898e-07
TCGA-D8-A4Z1-01A-21D-A25Q-09	14	14	0	8	0	coding only	1	28835288	...	6	7	14	2.080784e-07	2.427581e-07	4.855162e-07	-6.313796e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A105-01A-11D-A10M-09	58	56	2	43	3.448276e-02	coding only	1	28835288	...	13	34	58	4.508365e-07	1.179111e-06	2.011424e-06	-5.696496e+00	...	9	28779097	...	3.127270e-07
TCGA-E2-A107-01A-11D-A10M-09	28	28	0	21	0	coding only	1	28835288	...	7	18	28	2.427581e-07	6.242351e-07	9.710324e-07	-6.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A108-01A-13D-A10M-09	52	52	0	39	0	coding only	1	28835288	...	13	38	52	4.508365e-07	1.317830e-06	1.803346e-06	-5.743921e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A109-01A-11D-A10M-09	80	75	5	63	6.250000e-02	coding only	1	28835288	...	12	45	79	4.161568e-07	1.560588e-06	2.739699e-06	-5.562297e+00	...	18	28779097	...	6.254540e-07
TCGA-E2-A10A-01A-21D-A10Y-09	20	20	0	15	0	coding only	1	28835288	...	5	11	20	1.733986e-07	3.814770e-07	6.935946e-07	-6.158894e+00	...	4	28779097	...	1.389898e-07
TCGA-E2-A10B-01A-11D-A10M-09	37	36	1	28	2.702703e-02	coding only	1	28835288	...	8	27	37	2.774378e-07	9.363527e-07	1.283150e-06	-5.891723e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A10C-01A-21D-A10M-09	350	343	7	254	2.000000e-02	coding only	1	28835288	...	89	248	344	3.086496e-06	8.600573e-06	1.192983e-05	-4.923366e+00	...	0	28779097	...	0
TCGA-E2-A10E-01A-21D-A10M-09	24	23	1	20	4.166667e-02	coding only	1	28835288	...	3	20	24	1.040392e-07	6.935946e-07	8.323135e-07	-6.079713e+00	...	0	28779097	...	0
TCGA-E2-A10F-01A-11D-A10M-09	26	26	0	20	0	coding only	1	28835288	...	6	18	25	2.080784e-07	6.242351e-07	8.669932e-07	-6.061984e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A14N-01A-31D-A135-09	56	54	2	41	3.571429e-02	coding only	1	28835288	...	13	41	56	4.508365e-07	1.421869e-06	1.942065e-06	-5.711736e+00	...	0	28779097	...	0
TCGA-E2-A14O-01A-31D-A10Y-09	32	32	0	28	0	coding only	1	28835288	...	4	23	30	1.387189e-07	7.976338e-07	1.040392e-06	-5.982803e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A14P-01A-31D-A12B-09	76	75	1	52	1.315789e-02	coding only	1	28835288	...	22	48	74	7.629541e-07	1.664627e-06	2.566300e-06	-5.590693e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A14Q-01A-11D-A12B-09	22	21	1	16	4.545455e-02	coding only	1	28835288	...	5	14	22	1.733986e-07	4.855162e-07	7.629541e-07	-6.117502e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A14R-01A-11D-A10Y-09	100	100	0	86	0	coding only	1	28835288	...	14	81	97	4.855162e-07	2.809058e-06	3.363934e-06	-5.473153e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A14S-01A-11D-A12B-09	30	30	0	23	0	coding only	1	28835288	...	7	21	30	2.427581e-07	7.282743e-07	1.040392e-06	-5.982803e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A14T-01A-11D-A10Y-09	32	32	0	26	0	coding only	1	28835288	...	6	19	31	2.080784e-07	6.589149e-07	1.075072e-06	-5.968563e+00	...	6	28779097	...	2.084847e-07
TCGA-E2-A14U-01A-11D-A228-09	15	15	0	11	0	coding only	1	28835288	...	4	9	15	1.387189e-07	3.121176e-07	5.201959e-07	-6.283833e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A14V-01A-11D-A12B-09	70	68	2	55	2.857143e-02	coding only	1	28835288	...	13	52	70	4.508365e-07	1.803346e-06	2.427581e-06	-5.614826e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A14W-01A-11D-A12B-09	81	79	2	64	2.469136e-02	coding only	1	28835288	...	14	53	78	4.855162e-07	1.838026e-06	2.705019e-06	-5.567830e+00	...	9	28779097	...	3.127270e-07
TCGA-E2-A14X-01A-11D-A10Y-09	24	23	1	15	4.166667e-02	coding only	1	28835288	...	8	14	24	2.774378e-07	4.855162e-07	8.323135e-07	-6.079713e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A14Y-01A-21D-A12B-09	33	33	0	25	0	coding only	1	28835288	...	8	20	33	2.774378e-07	6.935946e-07	1.144431e-06	-5.941410e+00	...	5	28779097	...	1.737372e-07
TCGA-E2-A14Z-01A-11D-A10Y-09	58	57	1	41	1.724138e-02	coding only	1	28835288	...	16	38	57	5.548757e-07	1.317830e-06	1.976745e-06	-5.704049e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A150-01A-11D-A12B-09	44	44	0	35	0	coding only	1	28835288	...	8	34	43	2.774378e-07	1.179111e-06	1.491228e-06	-5.826456e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A152-01A-11D-A12B-09	116	114	2	89	1.724138e-02	coding only	1	28835288	...	23	84	110	7.976338e-07	2.913097e-06	3.814770e-06	-5.418532e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A153-01A-12D-A12B-09	22	22	0	17	0	coding only	1	28835288	...	4	14	20	1.387189e-07	4.855162e-07	6.935946e-07	-6.158894e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A154-01A-11D-A10Y-09	38	37	1	29	2.631579e-02	coding only	1	28835288	...	8	29	38	2.774378e-07	1.005712e-06	1.317830e-06	-5.880141e+00	...	0	28779097	...	0
TCGA-E2-A155-01A-11D-A12B-09	53	53	0	39	0	coding only	1	28835288	...	14	36	53	4.855162e-07	1.248470e-06	1.838026e-06	-5.735648e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A156-01A-11D-A12B-09	15	15	0	15	0	coding only	1	28835288	...	0	12	15	0	4.161568e-07	5.201959e-07	-6.283833e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A158-01A-11D-A12B-09	82	80	2	71	2.439024e-02	coding only	1	28835288	...	9	68	81	3.121176e-07	2.358222e-06	2.809058e-06	-5.551439e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A159-01A-11D-A10Y-09	145	140	5	109	3.448276e-02	exome+100bp flanks	2	35791301	...	31	107	144	8.661322e-07	2.989553e-06	4.023324e-06	-5.395415e+00	...	1	32078719	...	3.117331e-08
TCGA-E2-A15A-01A-11D-A12B-09	38	38	0	36	0	coding only	1	28835288	...	2	34	38	6.935946e-08	1.179111e-06	1.317830e-06	-5.880141e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A15C-01A-31D-A12B-09	29	28	1	21	3.448276e-02	coding only	1	28835288	...	7	18	29	2.427581e-07	6.242351e-07	1.005712e-06	-5.997526e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A15D-01A-11D-A10Y-09	28	28	0	24	0	coding only	1	28835288	...	4	23	28	1.387189e-07	7.976338e-07	9.710324e-07	-6.012766e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A15E-01A-11D-A12B-09	27	27	0	22	0	coding only	1	28835288	...	5	21	27	1.733986e-07	7.282743e-07	9.363527e-07	-6.028561e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A15F-01A-11D-A10Y-09	21	21	0	19	0	coding only	1	28835288	...	2	17	21	6.935946e-08	5.895554e-07	7.282743e-07	-6.137705e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A15G-01A-11D-A12B-09	56	56	0	38	0	coding only	1	28835288	...	18	34	56	6.242351e-07	1.179111e-06	1.942065e-06	-5.711736e+00	...	4	28779097	...	1.389898e-07
TCGA-E2-A15H-01A-11D-A12B-09	30	28	2	25	6.666667e-02	coding only	1	28835288	...	3	21	30	1.040392e-07	7.282743e-07	1.040392e-06	-5.982803e+00	...	4	28779097	...	1.389898e-07
TCGA-E2-A15I-01A-21D-A135-09	101	101	0	73	0	coding only	1	28835288	...	28	69	99	9.710324e-07	2.392901e-06	3.433293e-06	-5.464289e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A15J-01A-11D-A12Q-09	23	22	1	17	4.347826e-02	coding only	1	28835288	...	5	16	23	1.733986e-07	5.548757e-07	7.976338e-07	-6.098196e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A15K-01A-11D-A12Q-09	40	40	0	32	0	coding only	1	28835288	...	8	28	39	2.774378e-07	9.710324e-07	1.352509e-06	-5.868860e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A15L-01A-11D-A12B-09	31	30	1	28	3.225806e-02	coding only	1	28835288	...	2	25	30	6.935946e-08	8.669932e-07	1.040392e-06	-5.982803e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A15M-01A-11D-A12B-09	65	65	0	48	0	coding only	1	28835288	...	17	44	65	5.895554e-07	1.525908e-06	2.254182e-06	-5.647011e+00	...	4	28779097	...	1.389898e-07
TCGA-E2-A15O-01A-11D-A10Y-09	32	32	0	25	0	coding only	1	28835288	...	7	20	32	2.427581e-07	6.935946e-07	1.109751e-06	-5.954774e+00	...	5	28779097	...	1.737372e-07
TCGA-E2-A15P-01A-11D-A10Y-09	44	43	1	38	2.272727e-02	coding only	1	28835288	...	5	14	44	1.733986e-07	4.855162e-07	1.525908e-06	-5.816472e+00	...	24	28779097	...	8.339386e-07
TCGA-E2-A15R-01A-11D-A10Y-09	40	40	0	30	0	coding only	1	28835288	...	9	28	39	3.121176e-07	9.710324e-07	1.352509e-06	-5.868860e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A15S-01A-11D-A10Y-09	45	43	2	32	4.444444e-02	coding only	1	28835288	...	11	30	45	3.814770e-07	1.040392e-06	1.560588e-06	-5.806712e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A15T-01A-11D-A10Y-09	43	43	0	32	0	coding only	1	28835288	...	11	20	42	3.814770e-07	6.935946e-07	1.456549e-06	-5.836675e+00	...	11	28779097	...	3.822219e-07
TCGA-E2-A1AZ-01A-11D-A12Q-09	51	50	1	35	1.960784e-02	coding only	1	28835288	...	15	34	51	5.201959e-07	1.179111e-06	1.768666e-06	-5.752354e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A1B0-01A-11D-A12Q-09	38	38	0	26	0	coding only	1	28835288	...	12	24	38	4.161568e-07	8.323135e-07	1.317830e-06	-5.880141e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1B1-01A-21D-A12Q-09	12	12	0	8	0	coding only	1	28835288	...	4	7	12	1.387189e-07	2.427581e-07	4.161568e-07	-6.380743e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A1B4-01A-11D-A12Q-09	30	29	1	26	3.333333e-02	coding only	1	28835288	...	3	25	30	1.040392e-07	8.669932e-07	1.040392e-06	-5.982803e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A1B5-01A-21D-A12Q-09	15	15	0	12	0	coding only	1	28835288	...	3	7	15	1.040392e-07	2.427581e-07	5.201959e-07	-6.283833e+00	...	5	28779097	...	1.737372e-07
TCGA-E2-A1B6-01A-31D-A12Q-09	10	10	0	8	0	coding only	1	28835288	...	1	8	9	3.467973e-08	2.774378e-07	3.121176e-07	-6.505682e+00	...	0	28779097	...	0
TCGA-E2-A1BC-01A-11D-A14G-09	30	29	1	22	3.333333e-02	coding only	1	28835288	...	7	19	30	2.427581e-07	6.589149e-07	1.040392e-06	-5.982803e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A1BD-01A-11D-A12Q-09	29	29	0	24	0	coding only	1	28835288	...	5	20	29	1.733986e-07	6.935946e-07	1.005712e-06	-5.997526e+00	...	4	28779097	...	1.389898e-07
TCGA-E2-A1IE-01A-11D-A188-09	17	17	0	15	0	coding only	1	28835288	...	2	15	17	6.935946e-08	5.201959e-07	5.895554e-07	-6.229475e+00	...	0	28779097	...	0
TCGA-E2-A1IF-01A-11D-A142-09	15	15	0	14	0	coding only	1	28835288	...	1	11	15	3.467973e-08	3.814770e-07	5.201959e-07	-6.283833e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A1IG-01A-11D-A142-09	40	39	1	30	2.500000e-02	coding only	1	28835288	...	8	23	37	2.774378e-07	7.976338e-07	1.283150e-06	-5.891723e+00	...	5	28779097	...	1.737372e-07
TCGA-E2-A1IH-01A-11D-A188-09	61	61	0	51	0	coding only	1	28835288	...	10	48	60	3.467973e-07	1.664627e-06	2.080784e-06	-5.681773e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1II-01A-11D-A142-09	27	25	2	20	7.407407e-02	coding only	1	28835288	...	5	17	27	1.733986e-07	5.895554e-07	9.363527e-07	-6.028561e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A1IJ-01A-11D-A142-09	18	17	1	14	5.555556e-02	coding only	1	28835288	...	3	11	18	1.040392e-07	3.814770e-07	6.242351e-07	-6.204652e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A1IK-01A-11D-A17G-09	13	13	0	10	0	coding only	1	28835288	...	3	8	13	1.040392e-07	2.774378e-07	4.508365e-07	-6.345981e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1IL-01A-11D-A14G-09	20	20	0	16	0	coding only	1	28835288	...	4	13	20	1.387189e-07	4.508365e-07	6.935946e-07	-6.158894e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A1IN-01A-11D-A13L-09	189	186	3	134	1.587302e-02	coding only	1	28835288	...	51	129	185	1.768666e-06	4.473685e-06	6.415750e-06	-5.192753e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1IO-01A-11D-A142-09	13	13	0	12	0	coding only	1	28835288	...	1	10	13	3.467973e-08	3.467973e-07	4.508365e-07	-6.345981e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1IU-01A-11D-A14G-09	20	18	2	14	1.000000e-01	coding only	1	28835288	...	4	11	20	1.387189e-07	3.814770e-07	6.935946e-07	-6.158894e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A1L6-01A-11D-A13L-09	18	17	1	13	5.555556e-02	coding only	1	28835288	...	4	11	18	1.387189e-07	3.814770e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1L7-01A-11D-A142-09	61	60	1	52	1.639344e-02	coding only	1	28835288	...	8	49	60	2.774378e-07	1.699307e-06	2.080784e-06	-5.681773e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1L8-01A-11D-A13L-09	27	27	0	21	0	coding only	1	28835288	...	5	20	26	1.733986e-07	6.935946e-07	9.016730e-07	-6.044951e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A1L9-01A-11D-A13L-09	23	22	1	18	4.347826e-02	coding only	1	28835288	...	4	15	22	1.387189e-07	5.201959e-07	7.629541e-07	-6.117502e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1LA-01A-11D-A142-09	79	79	0	58	0	coding only	1	28835288	...	21	52	77	7.282743e-07	1.803346e-06	2.670339e-06	-5.573434e+00	...	4	28779097	...	1.389898e-07
TCGA-E2-A1LB-01A-11D-A142-09	37	37	0	30	0	coding only	1	28835288	...	7	28	37	2.427581e-07	9.710324e-07	1.283150e-06	-5.891723e+00	...	2	28779097	...	6.949488e-08
TCGA-E2-A1LE-01A-12D-A19Y-09	65	62	3	50	4.615385e-02	coding only	1	28835288	...	12	46	64	4.161568e-07	1.595268e-06	2.219503e-06	-5.653744e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A1LG-01A-21D-A14K-09	121	117	4	86	3.305785e-02	coding only	1	28835288	...	31	83	120	1.075072e-06	2.878418e-06	4.161568e-06	-5.380743e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A1LH-01A-11D-A14G-09	145	143	2	115	1.379310e-02	coding only	1	28835288	...	27	106	143	9.363527e-07	3.676051e-06	4.959201e-06	-5.304588e+00	...	8	28779097	...	2.779795e-07
TCGA-E2-A1LI-01A-12D-A159-09	12	12	0	9	0	coding only	1	28835288	...	2	9	11	6.935946e-08	3.121176e-07	3.814770e-07	-6.418532e+00	...	0	28779097	...	0
TCGA-E2-A1LK-01A-21D-A14G-09	43	41	2	27	4.651163e-02	coding only	1	28835288	...	14	21	43	4.855162e-07	7.282743e-07	1.491228e-06	-5.826456e+00	...	6	28779097	...	2.084847e-07
TCGA-E2-A1LL-01A-11D-A142-09	24	22	2	17	8.333333e-02	coding only	1	28835288	...	5	15	23	1.733986e-07	5.201959e-07	7.976338e-07	-6.098196e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A1LS-01A-12D-A159-09	70	69	1	55	1.428571e-02	coding only	1	28835288	...	14	46	70	4.855162e-07	1.595268e-06	2.427581e-06	-5.614826e+00	...	9	28779097	...	3.127270e-07
TCGA-E2-A2P5-01A-11D-A19Y-09	84	83	1	62	1.190476e-02	coding only	1	28835288	...	21	59	84	7.282743e-07	2.046104e-06	2.913097e-06	-5.535645e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A2P6-01A-11D-A19Y-09	140	138	2	94	1.428571e-02	coding only	1	28835288	...	43	86	137	1.491228e-06	2.982457e-06	4.751123e-06	-5.323204e+00	...	6	28779097	...	2.084847e-07
TCGA-E2-A3DX-01A-21D-A20S-09	12	12	0	8	0	coding only	1	28835288	...	3	7	11	1.040392e-07	2.427581e-07	3.814770e-07	-6.418532e+00	...	1	28779097	...	3.474744e-08
TCGA-E2-A56Z-01A-12D-A29N-09	47	46	1	40	2.127660e-02	coding only	1	28835288	...	6	33	47	2.080784e-07	1.144431e-06	1.629947e-06	-5.787826e+00	...	7	28779097	...	2.432321e-07
TCGA-E2-A570-01A-11D-A29N-09	27	26	1	20	3.703704e-02	coding only	1	28835288	...	6	17	26	2.080784e-07	5.895554e-07	9.016730e-07	-6.044951e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A573-01A-11D-A29N-09	50	49	1	38	2.000000e-02	coding only	1	28835288	...	10	33	47	3.467973e-07	1.144431e-06	1.629947e-06	-5.787826e+00	...	3	28779097	...	1.042423e-07
TCGA-E2-A574-01A-11D-A29N-09	105	100	5	70	4.761905e-02	exome+100bp flanks	2	35791301	...	30	64	104	8.381925e-07	1.788144e-06	2.905734e-06	-5.536744e+00	...	5	32078719	...	1.558666e-07
TCGA-E9-A1N3-01A-12D-A159-09	24	24	0	21	0	coding only	1	28835288	...	3	19	24	1.040392e-07	6.589149e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1N4-01A-11D-A14K-09	24	20	4	14	1.666667e-01	coding only	1	28835288	...	5	14	23	1.733986e-07	4.855162e-07	7.976338e-07	-6.098196e+00	...	0	28779097	...	0
TCGA-E9-A1N5-01A-11D-A14G-09	28	27	1	21	3.571429e-02	coding only	1	28835288	...	6	21	28	2.080784e-07	7.282743e-07	9.710324e-07	-6.012766e+00	...	0	28779097	...	0
TCGA-E9-A1N8-01A-11D-A142-09	25	25	0	22	0	coding only	1	28835288	...	3	19	25	1.040392e-07	6.589149e-07	8.669932e-07	-6.061984e+00	...	3	28779097	...	1.042423e-07
TCGA-E9-A1N9-01A-11D-A14G-09	47	46	1	38	2.127660e-02	coding only	1	28835288	...	8	35	46	2.774378e-07	1.213791e-06	1.595268e-06	-5.797166e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1NA-01A-11D-A142-09	88	88	0	71	0	coding only	1	28835288	...	17	60	86	5.895554e-07	2.080784e-06	2.982457e-06	-5.525426e+00	...	9	28779097	...	3.127270e-07
TCGA-E9-A1NC-01A-12W-A16L-09	109	109	0	96	0	coding only	1	28835288	...	13	38	106	4.508365e-07	1.317830e-06	3.676051e-06	-5.434618e+00	...	55	28779097	...	1.911109e-06
TCGA-E9-A1ND-01A-11D-A142-09	63	63	0	50	0	coding only	1	28835288	...	13	47	62	4.508365e-07	1.629947e-06	2.150143e-06	-5.667533e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1NE-01A-21D-A14K-09	32	32	0	29	0	coding only	1	28835288	...	3	27	31	1.040392e-07	9.363527e-07	1.075072e-06	-5.968563e+00	...	1	28779097	...	3.474744e-08
TCGA-E9-A1NF-01A-11D-A14G-09	43	43	0	35	0	coding only	1	28835288	...	8	30	42	2.774378e-07	1.040392e-06	1.456549e-06	-5.836675e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A1NG-01A-21D-A14K-09	17	16	1	13	5.882353e-02	coding only	1	28835288	...	3	12	16	1.040392e-07	4.161568e-07	5.548757e-07	-6.255804e+00	...	0	28779097	...	0
TCGA-E9-A1NH-01A-11D-A14G-09	26	24	2	17	7.692308e-02	coding only	1	28835288	...	7	13	26	2.427581e-07	4.508365e-07	9.016730e-07	-6.044951e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A1NI-01A-11W-A16H-09	87	86	1	82	1.149425e-02	coding only	1	28835288	...	4	13	83	1.387189e-07	4.508365e-07	2.878418e-06	-5.540846e+00	...	65	28779097	...	2.258584e-06
TCGA-E9-A1QZ-01A-21D-A167-09	10	10	0	9	0	coding only	1	28835288	...	1	7	10	3.467973e-08	2.427581e-07	3.467973e-07	-6.459924e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1R0-01A-22D-A16D-09	24	23	1	18	4.166667e-02	coding only	1	28835288	...	5	18	24	1.733986e-07	6.242351e-07	8.323135e-07	-6.079713e+00	...	0	28779097	...	0
TCGA-E9-A1R2-01A-11D-A14G-09	51	51	0	42	0	coding only	1	28835288	...	9	35	48	3.121176e-07	1.213791e-06	1.664627e-06	-5.778683e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A1R3-01A-31D-A14K-09	24	23	1	18	4.166667e-02	coding only	1	28835288	...	5	16	24	1.733986e-07	5.548757e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1R4-01A-21D-A14G-09	94	93	1	73	1.063830e-02	coding only	1	28835288	...	20	70	93	6.935946e-07	2.427581e-06	3.225215e-06	-5.491441e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1R5-01A-11D-A14K-09	34	34	0	25	0	coding only	1	28835288	...	9	23	34	3.121176e-07	7.976338e-07	1.179111e-06	-5.928445e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1R6-01A-11D-A14G-09	26	26	0	19	0	coding only	1	28835288	...	7	14	25	2.427581e-07	4.855162e-07	8.669932e-07	-6.061984e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A1R7-01A-11D-A14K-09	51	49	2	38	3.921569e-02	coding only	1	28835288	...	11	35	50	3.814770e-07	1.213791e-06	1.733986e-06	-5.760954e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1RA-01A-11D-A14G-09	20	20	0	12	0	coding only	1	28835288	...	8	12	20	2.774378e-07	4.161568e-07	6.935946e-07	-6.158894e+00	...	0	28779097	...	0
TCGA-E9-A1RB-01A-11D-A17G-09	29	27	2	18	6.896552e-02	coding only	1	28835288	...	9	17	29	3.121176e-07	5.895554e-07	1.005712e-06	-5.997526e+00	...	1	28779097	...	3.474744e-08
TCGA-E9-A1RC-01A-11D-A159-09	46	46	0	34	0	coding only	1	28835288	...	12	30	45	4.161568e-07	1.040392e-06	1.560588e-06	-5.806712e+00	...	3	28779097	...	1.042423e-07
TCGA-E9-A1RD-01A-11D-A159-09	24	24	0	19	0	coding only	1	28835288	...	4	17	23	1.387189e-07	5.895554e-07	7.976338e-07	-6.098196e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A1RE-01A-11D-A159-09	42	41	1	34	2.380952e-02	coding only	1	28835288	...	7	30	41	2.427581e-07	1.040392e-06	1.421869e-06	-5.847140e+00	...	3	28779097	...	1.042423e-07
TCGA-E9-A1RF-01A-11D-A159-09	127	122	5	100	3.937008e-02	exome+100bp flanks	2	35791301	...	22	92	125	6.146745e-07	2.570457e-06	3.492469e-06	-5.456867e+00	...	6	32078719	...	1.870399e-07
TCGA-E9-A1RG-01A-11D-A14G-09	36	36	0	29	0	coding only	1	28835288	...	7	28	36	2.427581e-07	9.710324e-07	1.248470e-06	-5.903622e+00	...	1	28779097	...	3.474744e-08
TCGA-E9-A1RH-01A-21D-A167-09	78	77	1	61	1.282051e-02	coding only	1	28835288	...	16	55	77	5.548757e-07	1.907385e-06	2.670339e-06	-5.573434e+00	...	5	28779097	...	1.737372e-07
TCGA-E9-A1RI-01A-11D-A167-09	16	16	0	8	0	coding only	1	28835288	...	8	6	16	2.774378e-07	2.080784e-07	5.548757e-07	-6.255804e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A226-01A-21D-A159-09	31	31	0	21	0	coding only	1	28835288	...	10	17	31	3.467973e-07	5.895554e-07	1.075072e-06	-5.968563e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A227-01A-11D-A159-09	12	12	0	10	0	coding only	1	28835288	...	2	8	12	6.935946e-08	2.774378e-07	4.161568e-07	-6.380743e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A228-01A-31D-A159-09	40	40	0	28	0	coding only	1	28835288	...	11	28	39	3.814770e-07	9.710324e-07	1.352509e-06	-5.868860e+00	...	0	28779097	...	0
TCGA-E9-A229-01A-31D-A17G-09	21	21	0	13	0	coding only	1	28835288	...	8	11	21	2.774378e-07	3.814770e-07	7.282743e-07	-6.137705e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A22A-01A-11D-A159-09	29	29	0	23	0	coding only	1	28835288	...	6	22	29	2.080784e-07	7.629541e-07	1.005712e-06	-5.997526e+00	...	1	28779097	...	3.474744e-08
TCGA-E9-A22B-01A-11D-A159-09	51	50	1	38	1.960784e-02	coding only	1	28835288	...	12	38	51	4.161568e-07	1.317830e-06	1.768666e-06	-5.752354e+00	...	0	28779097	...	0
TCGA-E9-A22D-01A-11D-A159-09	19	18	1	12	5.263158e-02	coding only	1	28835288	...	4	10	17	1.387189e-07	3.467973e-07	5.895554e-07	-6.229475e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A22E-01A-11D-A159-09	81	79	2	64	2.469136e-02	coding only	1	28835288	...	14	57	77	4.855162e-07	1.976745e-06	2.670339e-06	-5.573434e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A22G-01A-11D-A159-09	98	94	4	71	4.081633e-02	coding only	1	28835288	...	21	58	90	7.282743e-07	2.011424e-06	3.121176e-06	-5.505682e+00	...	7	28779097	...	2.432321e-07
TCGA-E9-A22H-01A-11D-A159-09	18	18	0	18	0	coding only	1	28835288	...	0	14	18	0	4.855162e-07	6.242351e-07	-6.204652e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A243-01A-21D-A167-09	60	57	3	46	5.000000e-02	coding only	1	28835288	...	11	43	59	3.814770e-07	1.491228e-06	2.046104e-06	-5.689072e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A244-01A-11D-A167-09	80	80	0	58	0	coding only	1	28835288	...	21	53	77	7.282743e-07	1.838026e-06	2.670339e-06	-5.573434e+00	...	3	28779097	...	1.042423e-07
TCGA-E9-A245-01A-22D-A16D-09	18	17	1	12	5.555556e-02	coding only	1	28835288	...	5	9	18	1.733986e-07	3.121176e-07	6.242351e-07	-6.204652e+00	...	3	28779097	...	1.042423e-07
TCGA-E9-A247-01A-11D-A167-09	30	28	2	23	6.666667e-02	coding only	1	28835288	...	5	22	30	1.733986e-07	7.629541e-07	1.040392e-06	-5.982803e+00	...	1	28779097	...	3.474744e-08
TCGA-E9-A248-01A-11D-A167-09	16	16	0	14	0	coding only	1	28835288	...	2	11	15	6.935946e-08	3.814770e-07	5.201959e-07	-6.283833e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A249-01A-11D-A167-09	15	15	0	10	0	coding only	1	28835288	...	5	9	15	1.733986e-07	3.121176e-07	5.201959e-07	-6.283833e+00	...	1	28779097	...	3.474744e-08
TCGA-E9-A24A-01A-11D-A167-09	18	18	0	18	0	coding only	1	28835288	...	0	16	18	0	5.548757e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A295-01A-11D-A16D-09	67	67	0	54	0	coding only	1	28835288	...	13	50	67	4.508365e-07	1.733986e-06	2.323542e-06	-5.633849e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A2JS-01A-11D-A17W-09	66	64	2	46	3.030303e-02	coding only	1	28835288	...	18	42	66	6.242351e-07	1.456549e-06	2.288862e-06	-5.640380e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A2JT-01A-22D-A18P-09	5	5	0	4	0	coding only	1	28835288	...	1	3	4	3.467973e-08	1.040392e-07	1.387189e-07	-6.857864e+00	...	0	28779097	...	0
TCGA-E9-A3HO-01A-11D-A20S-09	63	62	1	54	1.587302e-02	coding only	1	28835288	...	8	46	60	2.774378e-07	1.595268e-06	2.080784e-06	-5.681773e+00	...	5	28779097	...	1.737372e-07
TCGA-E9-A3Q9-01A-11D-A21Q-09	38	38	0	31	0	coding only	1	28835288	...	7	23	37	2.427581e-07	7.976338e-07	1.283150e-06	-5.891723e+00	...	7	28779097	...	2.432321e-07
TCGA-E9-A3QA-01A-61D-A228-09	59	59	0	46	0	coding only	1	28835288	...	13	44	57	4.508365e-07	1.525908e-06	1.976745e-06	-5.704049e+00	...	0	28779097	...	0
TCGA-E9-A3X8-01A-31D-A22X-09	18	18	0	13	0	coding only	1	28835288	...	5	11	18	1.733986e-07	3.814770e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A54X-01A-11D-A25Q-09	28	28	0	22	0	coding only	1	28835288	...	6	16	26	2.080784e-07	5.548757e-07	9.016730e-07	-6.044951e+00	...	4	28779097	...	1.389898e-07
TCGA-E9-A54Y-01A-11D-A25Q-09	40	40	0	29	0	coding only	1	28835288	...	11	23	39	3.814770e-07	7.976338e-07	1.352509e-06	-5.868860e+00	...	5	28779097	...	1.737372e-07
TCGA-E9-A5FK-01A-11D-A27P-09	16	16	0	13	0	coding only	1	28835288	...	3	10	15	1.040392e-07	3.467973e-07	5.201959e-07	-6.283833e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A5FL-01A-11D-A27P-09	80	77	3	66	3.750000e-02	coding only	1	28835288	...	11	64	80	3.814770e-07	2.219503e-06	2.774378e-06	-5.556834e+00	...	2	28779097	...	6.949488e-08
TCGA-E9-A5UO-01A-11D-A28B-09	33	32	1	26	3.030303e-02	coding only	1	28835288	...	6	19	33	2.080784e-07	6.589149e-07	1.144431e-06	-5.941410e+00	...	7	28779097	...	2.432321e-07
TCGA-E9-A5UP-01A-11D-A28B-09	28	27	1	21	3.571429e-02	coding only	1	28835288	...	6	16	27	2.080784e-07	5.548757e-07	9.363527e-07	-6.028561e+00	...	4	28779097	...	1.389898e-07
TCGA-EW-A1IW-01A-11D-A13L-09	80	78	2	55	2.500000e-02	coding only	1	28835288	...	23	48	77	7.976338e-07	1.664627e-06	2.670339e-06	-5.573434e+00	...	4	28779097	...	1.389898e-07
TCGA-EW-A1IX-01A-12D-A142-09	18	18	0	16	0	coding only	1	28835288	...	2	13	17	6.935946e-08	4.508365e-07	5.895554e-07	-6.229475e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A1IY-01A-11D-A188-09	24	24	0	17	0	coding only	1	28835288	...	7	15	23	2.427581e-07	5.201959e-07	7.976338e-07	-6.098196e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A1IZ-01A-11D-A188-09	314	308	6	226	1.910828e-02	coding only	1	28835288	...	80	194	307	2.774378e-06	6.727868e-06	1.064668e-05	-4.972786e+00	...	26	28779097	...	9.034335e-07
TCGA-EW-A1J1-01A-11D-A188-09	20	20	0	12	0	coding only	1	28835288	...	7	11	19	2.427581e-07	3.814770e-07	6.589149e-07	-6.181171e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A1J2-01A-21D-A13L-09	27	27	0	22	0	coding only	1	28835288	...	5	21	27	1.733986e-07	7.282743e-07	9.363527e-07	-6.028561e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A1J3-01A-11D-A13L-09	26	26	0	21	0	coding only	1	28835288	...	5	19	25	1.733986e-07	6.589149e-07	8.669932e-07	-6.061984e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A1J5-01A-11D-A13L-09	405	397	8	293	1.975309e-02	coding only	1	28835288	...	103	288	400	3.572012e-06	9.987762e-06	1.387189e-05	-4.857864e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A1J6-01A-11D-A188-09	41	41	0	28	0	coding only	1	28835288	...	13	25	41	4.508365e-07	8.669932e-07	1.421869e-06	-5.847140e+00	...	3	28779097	...	1.042423e-07
TCGA-EW-A1OV-01A-11D-A142-09	90	87	3	66	3.333333e-02	coding only	1	28835288	...	21	62	87	7.282743e-07	2.150143e-06	3.017137e-06	-5.520405e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A1OX-01A-11D-A142-09	21	20	1	13	4.761905e-02	coding only	1	28835288	...	7	7	21	2.427581e-07	2.427581e-07	7.282743e-07	-6.137705e+00	...	6	28779097	...	2.084847e-07
TCGA-EW-A1OY-01A-11D-A142-09	60	59	1	48	1.666667e-02	coding only	1	28835288	...	11	44	60	3.814770e-07	1.525908e-06	2.080784e-06	-5.681773e+00	...	4	28779097	...	1.389898e-07
TCGA-EW-A1OZ-01A-11D-A142-09	48	47	1	38	2.083333e-02	coding only	1	28835288	...	9	34	47	3.121176e-07	1.179111e-06	1.629947e-06	-5.787826e+00	...	3	28779097	...	1.042423e-07
TCGA-EW-A1P0-01A-11D-A142-09	23	23	0	18	0	coding only	1	28835288	...	5	15	23	1.733986e-07	5.201959e-07	7.976338e-07	-6.098196e+00	...	3	28779097	...	1.042423e-07
TCGA-EW-A1P1-01A-31D-A14G-09	2	2	0	1	0	coding only	1	28835288	...	1	0	1	3.467973e-08	0	3.467973e-08	-7.459924e+00	...	0	28779097	...	0
TCGA-EW-A1P3-01A-11D-A142-09	13	13	0	11	0	coding only	1	28835288	...	2	8	12	6.935946e-08	2.774378e-07	4.161568e-07	-6.380743e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A1P4-01A-21D-A142-09	56	55	1	43	1.785714e-02	coding only	1	28835288	...	12	40	56	4.161568e-07	1.387189e-06	1.942065e-06	-5.711736e+00	...	3	28779097	...	1.042423e-07
TCGA-EW-A1P5-01A-11D-A142-09	17	17	0	13	0	coding only	1	28835288	...	4	11	17	1.387189e-07	3.814770e-07	5.895554e-07	-6.229475e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A1P6-01A-11D-A142-09	20	19	1	17	5.000000e-02	coding only	1	28835288	...	2	15	20	6.935946e-08	5.201959e-07	6.935946e-07	-6.158894e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A1P7-01A-21D-A142-09	7	7	0	5	0	coding only	1	28835288	...	2	4	7	6.935946e-08	1.387189e-07	2.427581e-07	-6.614826e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A1P8-01A-11D-A142-09	37	37	0	27	0	coding only	1	28835288	...	10	25	37	3.467973e-07	8.669932e-07	1.283150e-06	-5.891723e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A1PA-01A-11D-A142-09	33	33	0	24	0	coding only	1	28835288	...	9	23	33	3.121176e-07	7.976338e-07	1.144431e-06	-5.941410e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A1PB-01A-11D-A142-09	134	130	4	100	2.985075e-02	coding only	1	28835288	...	30	93	131	1.040392e-06	3.225215e-06	4.543045e-06	-5.342653e+00	...	4	28779097	...	1.389898e-07
TCGA-EW-A1PC-01B-11D-A21Q-09	112	110	2	82	1.785714e-02	coding only	1	28835288	...	27	77	108	9.363527e-07	2.670339e-06	3.745411e-06	-5.426501e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A1PD-01A-11D-A142-09	68	67	1	55	1.470588e-02	coding only	1	28835288	...	12	53	68	4.161568e-07	1.838026e-06	2.358222e-06	-5.627415e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A1PE-01A-11D-A142-09	29	28	1	22	3.448276e-02	coding only	1	28835288	...	6	18	29	2.080784e-07	6.242351e-07	1.005712e-06	-5.997526e+00	...	4	28779097	...	1.389898e-07
TCGA-EW-A1PG-01A-11D-A142-09	6	6	0	5	0	coding only	1	28835288	...	1	5	6	3.467973e-08	1.733986e-07	2.080784e-07	-6.681773e+00	...	0	28779097	...	0
TCGA-EW-A1PH-01A-11D-A14K-09	43	40	3	33	6.976744e-02	coding only	1	28835288	...	7	30	43	2.427581e-07	1.040392e-06	1.491228e-06	-5.826456e+00	...	3	28779097	...	1.042423e-07
TCGA-EW-A2FR-01A-11D-A21Q-09	45	44	1	38	2.222222e-02	coding only	1	28835288	...	6	38	45	2.080784e-07	1.317830e-06	1.560588e-06	-5.806712e+00	...	0	28779097	...	0
TCGA-EW-A2FS-01A-11D-A17D-09	27	27	0	17	0	coding only	1	28835288	...	10	15	27	3.467973e-07	5.201959e-07	9.363527e-07	-6.028561e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A2FV-01A-11D-A17D-09	20	18	2	15	1.000000e-01	coding only	1	28835288	...	3	13	20	1.040392e-07	4.508365e-07	6.935946e-07	-6.158894e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A2FW-01A-11D-A17D-09	19	19	0	17	0	coding only	1	28835288	...	2	15	19	6.935946e-08	5.201959e-07	6.589149e-07	-6.181171e+00	...	2	28779097	...	6.949488e-08
TCGA-EW-A3E8-01B-11D-A243-09	85	84	1	65	1.176471e-02	coding only	1	28835288	...	19	64	85	6.589149e-07	2.219503e-06	2.947777e-06	-5.530505e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A3U0-01A-11D-A228-09	122	121	1	91	8.196721e-03	coding only	1	28835288	...	30	90	122	1.040392e-06	3.121176e-06	4.230927e-06	-5.373564e+00	...	1	28779097	...	3.474744e-08
TCGA-EW-A423-01A-11D-A243-09	54	54	0	35	0	coding only	1	28835288	...	19	33	53	6.589149e-07	1.144431e-06	1.838026e-06	-5.735648e+00	...	1	28779097	...	3.474744e-08
TCGA-GI-A2C8-01A-11D-A16D-09	105	104	1	81	9.523810e-03	coding only	1	28835288	...	20	76	99	6.935946e-07	2.635659e-06	3.433293e-06	-5.464289e+00	...	2	28779097	...	6.949488e-08
TCGA-GI-A2C9-01A-11D-A21Q-09	126	124	2	95	1.587302e-02	coding only	1	28835288	...	29	92	126	1.005712e-06	3.190535e-06	4.369646e-06	-5.359554e+00	...	3	28779097	...	1.042423e-07
TCGA-GM-A2D9-01A-11D-A18P-09	384	374	10	276	2.604167e-02	coding only	1	28835288	...	98	272	381	3.398614e-06	9.432887e-06	1.321298e-05	-4.878999e+00	...	1	28779097	...	3.474744e-08
TCGA-GM-A2DA-01A-11D-A18P-09	30	30	0	20	0	coding only	1	28835288	...	9	18	28	3.121176e-07	6.242351e-07	9.710324e-07	-6.012766e+00	...	1	28779097	...	3.474744e-08
TCGA-GM-A2DB-01A-31D-A19Y-09	95	91	4	81	4.210526e-02	coding only	1	28835288	...	10	65	94	3.467973e-07	2.254182e-06	3.259895e-06	-5.486796e+00	...	15	28779097	...	5.212116e-07
TCGA-GM-A2DC-01A-11D-A18P-09	18	18	0	13	0	coding only	1	28835288	...	5	11	18	1.733986e-07	3.814770e-07	6.242351e-07	-6.204652e+00	...	2	28779097	...	6.949488e-08
TCGA-GM-A2DD-01A-11D-A17W-09	43	42	1	34	2.325581e-02	coding only	1	28835288	...	8	31	42	2.774378e-07	1.075072e-06	1.456549e-06	-5.836675e+00	...	2	28779097	...	6.949488e-08
TCGA-GM-A2DF-01A-11D-A17W-09	31	30	1	22	3.225806e-02	coding only	1	28835288	...	7	21	30	2.427581e-07	7.282743e-07	1.040392e-06	-5.982803e+00	...	1	28779097	...	3.474744e-08
TCGA-GM-A2DH-01A-11D-A17W-09	110	109	1	90	9.090909e-03	coding only	1	28835288	...	19	87	109	6.589149e-07	3.017137e-06	3.780091e-06	-5.422498e+00	...	2	28779097	...	6.949488e-08
TCGA-GM-A2DI-01A-31D-A18P-09	26	26	0	20	0	coding only	1	28835288	...	6	19	26	2.080784e-07	6.589149e-07	9.016730e-07	-6.044951e+00	...	1	28779097	...	3.474744e-08
TCGA-GM-A2DK-01A-21D-A17W-09	23	22	1	14	4.347826e-02	coding only	1	28835288	...	7	13	22	2.427581e-07	4.508365e-07	7.629541e-07	-6.117502e+00	...	1	28779097	...	3.474744e-08
TCGA-GM-A2DL-01A-11D-A18P-09	42	42	0	37	0	coding only	1	28835288	...	5	33	40	1.733986e-07	1.144431e-06	1.387189e-06	-5.857864e+00	...	2	28779097	...	6.949488e-08
TCGA-GM-A2DM-01A-11D-A17W-09	19	19	0	18	0	coding only	1	28835288	...	1	16	18	3.467973e-08	5.548757e-07	6.242351e-07	-6.204652e+00	...	1	28779097	...	3.474744e-08
TCGA-GM-A2DN-01A-11D-A17W-09	20	20	0	17	0	coding only	1	28835288	...	3	16	20	1.040392e-07	5.548757e-07	6.935946e-07	-6.158894e+00	...	1	28779097	...	3.474744e-08
TCGA-GM-A2DO-01A-11D-A19Y-09	92	92	0	64	0	coding only	1	28835288	...	27	63	90	9.363527e-07	2.184823e-06	3.121176e-06	-5.505682e+00	...	0	28779097	...	0
TCGA-GM-A3NW-01A-21D-A228-09	79	77	2	56	2.531646e-02	coding only	1	28835288	...	20	47	77	6.935946e-07	1.629947e-06	2.670339e-06	-5.573434e+00	...	8	28779097	...	2.779795e-07
TCGA-GM-A3NY-01A-11D-A21Q-09	55	54	1	42	1.818182e-02	coding only	1	28835288	...	11	35	51	3.814770e-07	1.213791e-06	1.768666e-06	-5.752354e+00	...	4	28779097	...	1.389898e-07
TCGA-GM-A3XG-01A-31D-A243-09	5	5	0	4	0	coding only	1	28835288	...	1	4	5	3.467973e-08	1.387189e-07	1.733986e-07	-6.760954e+00	...	0	28779097	...	0
TCGA-GM-A3XL-01A-11D-A22X-09	79	78	1	64	1.265823e-02	coding only	1	28835288	...	14	60	77	4.855162e-07	2.080784e-06	2.670339e-06	-5.573434e+00	...	2	28779097	...	6.949488e-08
TCGA-GM-A3XN-01A-12D-A22X-09	18	18	0	13	0	coding only	1	28835288	...	5	11	17	1.733986e-07	3.814770e-07	5.895554e-07	-6.229475e+00	...	1	28779097	...	3.474744e-08
TCGA-GM-A4E0-01A-12D-A25Q-09	23	22	1	15	4.347826e-02	coding only	1	28835288	...	7	12	22	2.427581e-07	4.161568e-07	7.629541e-07	-6.117502e+00	...	2	28779097	...	6.949488e-08
TCGA-GM-A5PV-01A-11D-A28B-09	21	21	0	16	0	coding only	1	28835288	...	5	16	21	1.733986e-07	5.548757e-07	7.282743e-07	-6.137705e+00	...	0	28779097	...	0
TCGA-GM-A5PX-01A-12D-A28B-09	29	29	0	21	0	coding only	1	28835288	...	8	18	27	2.774378e-07	6.242351e-07	9.363527e-07	-6.028561e+00	...	1	28779097	...	3.474744e-08
TCGA-HN-A2NL-01A-11D-A18P-09	71	68	3	55	4.225352e-02	coding only	1	28835288	...	13	50	68	4.508365e-07	1.733986e-06	2.358222e-06	-5.627415e+00	...	3	28779097	...	1.042423e-07
TCGA-HN-A2OB-01A-21D-A27P-09	11	10	1	9	9.090909e-02	coding only	1	28835288	...	1	8	11	3.467973e-08	2.774378e-07	3.814770e-07	-6.418532e+00	...	1	28779097	...	3.474744e-08
TCGA-JL-A3YW-01A-12D-A23C-09	84	82	2	66	2.380952e-02	coding only	1	28835288	...	16	57	82	5.548757e-07	1.976745e-06	2.843738e-06	-5.546110e+00	...	8	28779097	...	2.779795e-07
TCGA-JL-A3YX-01A-11D-A22X-09	33	32	1	27	3.030303e-02	coding only	1	28835288	...	5	22	33	1.733986e-07	7.629541e-07	1.144431e-06	-5.941410e+00	...	5	28779097	...	1.737372e-07
TCGA-LL-A440-01A-11D-A243-09	6	6	0	3	0	coding only	1	28835288	...	3	3	6	1.040392e-07	1.040392e-07	2.080784e-07	-6.681773e+00	...	0	28779097	...	0
TCGA-LL-A441-01A-11D-A243-09	64	62	2	43	3.125000e-02	coding only	1	28835288	...	18	40	63	6.242351e-07	1.387189e-06	2.184823e-06	-5.660584e+00	...	3	28779097	...	1.042423e-07
TCGA-LL-A50Y-01A-11D-A25Q-09	37	36	1	24	2.702703e-02	coding only	1	28835288	...	12	20	37	4.161568e-07	6.935946e-07	1.283150e-06	-5.891723e+00	...	4	28779097	...	1.389898e-07
TCGA-LL-A5YL-01A-12D-A29N-09	69	68	1	50	1.449275e-02	coding only	1	28835288	...	18	47	69	6.242351e-07	1.629947e-06	2.392901e-06	-5.621075e+00	...	3	28779097	...	1.042423e-07
TCGA-LL-A5YM-01A-11D-A28B-09	27	26	1	19	3.703704e-02	coding only	1	28835288	...	7	14	24	2.427581e-07	4.855162e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-LL-A5YN-01A-11D-A28B-09	24	24	0	22	0	coding only	1	28835288	...	2	20	23	6.935946e-08	6.935946e-07	7.976338e-07	-6.098196e+00	...	1	28779097	...	3.474744e-08
TCGA-LL-A5YO-01A-21D-A28B-09	36	34	2	27	5.555556e-02	coding only	1	28835288	...	7	27	36	2.427581e-07	9.363527e-07	1.248470e-06	-5.903622e+00	...	0	28779097	...	0
TCGA-LL-A5YP-01A-21D-A28B-09	75	75	0	60	0	coding only	1	28835288	...	14	57	72	4.855162e-07	1.976745e-06	2.496941e-06	-5.602592e+00	...	1	28779097	...	3.474744e-08
TCGA-LQ-A4E4-01A-11D-A25Q-09	79	76	3	59	3.797468e-02	coding only	1	28835288	...	17	53	74	5.895554e-07	1.838026e-06	2.566300e-06	-5.590693e+00	...	2	28779097	...	6.949488e-08
TCGA-MS-A51U-01A-31D-A25Q-09	14	14	0	10	0	coding only	1	28835288	...	4	10	14	1.387189e-07	3.467973e-07	4.855162e-07	-6.313796e+00	...	0	28779097	...	0
TCGA-OK-A5Q2-01A-11D-A27P-09	27	26	1	21	3.703704e-02	coding only	1	28835288	...	5	20	27	1.733986e-07	6.935946e-07	9.363527e-07	-6.028561e+00	...	1	28779097	...	3.474744e-08
TCGA-OL-A5D6-01A-21D-A27P-09	37	37	0	29	0	coding only	1	28835288	...	8	26	37	2.774378e-07	9.016730e-07	1.283150e-06	-5.891723e+00	...	3	28779097	...	1.042423e-07
TCGA-OL-A5D7-01A-11D-A27P-09	53	50	3	38	5.660377e-02	coding only	1	28835288	...	12	36	52	4.161568e-07	1.248470e-06	1.803346e-06	-5.743921e+00	...	1	28779097	...	3.474744e-08
TCGA-OL-A5D8-01A-11D-A27P-09	31	30	1	22	3.225806e-02	coding only	1	28835288	...	8	16	31	2.774378e-07	5.548757e-07	1.075072e-06	-5.968563e+00	...	6	28779097	...	2.084847e-07
TCGA-OL-A5DA-01A-11D-A27P-09	59	59	0	42	0	coding only	1	28835288	...	16	39	57	5.548757e-07	1.352509e-06	1.976745e-06	-5.704049e+00	...	2	28779097	...	6.949488e-08
TCGA-OL-A5RU-01A-11D-A28B-09	25	25	0	22	0	coding only	1	28835288	...	3	19	24	1.040392e-07	6.589149e-07	8.323135e-07	-6.079713e+00	...	2	28779097	...	6.949488e-08
TCGA-OL-A5RV-01A-12D-A28B-09	12	12	0	10	0	coding only	1	28835288	...	2	9	12	6.935946e-08	3.121176e-07	4.161568e-07	-6.380743e+00	...	1	28779097	...	3.474744e-08
TCGA-OL-A5RW-01A-11D-A28B-09	147	144	3	116	2.040816e-02	coding only	1	28835288	...	28	113	147	9.710324e-07	3.918809e-06	5.097920e-06	-5.292607e+00	...	3	28779097	...	1.042423e-07
TCGA-OL-A5RX-01A-11D-A28B-09	27	26	1	20	3.703704e-02	coding only	1	28835288	...	6	19	27	2.080784e-07	6.589149e-07	9.363527e-07	-6.028561e+00	...	1	28779097	...	3.474744e-08
TCGA-OL-A5RY-01A-21D-A28B-09	10	10	0	8	0	coding only	1	28835288	...	2	8	10	6.935946e-08	2.774378e-07	3.467973e-07	-6.459924e+00	...	0	28779097	...	0
TCGA-OL-A5RZ-01A-11D-A28B-09	104	103	1	75	9.615385e-03	coding only	1	28835288	...	28	69	104	9.710324e-07	2.392901e-06	3.606692e-06	-5.442891e+00	...	6	28779097	...	2.084847e-07
TCGA-OL-A5S0-01A-11D-A28B-09	36	36	0	30	0	coding only	1	28835288	...	6	20	36	2.080784e-07	6.935946e-07	1.248470e-06	-5.903622e+00	...	10	28779097	...	3.474744e-07
TCGA-OL-A66H-01A-11D-A29N-09	22	22	0	16	0	coding only	1	28835288	...	6	14	22	2.080784e-07	4.855162e-07	7.629541e-07	-6.117502e+00	...	2	28779097	...	6.949488e-08
TCGA-OL-A66I-01A-21D-A29N-09	34	33	1	23	2.941176e-02	coding only	1	28835288	...	10	22	34	3.467973e-07	7.629541e-07	1.179111e-06	-5.928445e+00	...	1	28779097	...	3.474744e-08
TCGA-OL-A66J-01A-11D-A29N-09	52	51	1	42	1.923077e-02	coding only	1	28835288	...	9	38	51	3.121176e-07	1.317830e-06	1.768666e-06	-5.752354e+00	...	3	28779097	...	1.042423e-07
TCGA-OL-A66K-01A-11D-A29N-09	29	29	0	20	0	coding only	1	28835288	...	8	17	28	2.774378e-07	5.895554e-07	9.710324e-07	-6.012766e+00	...	3	28779097	...	1.042423e-07
TCGA-PE-A5DC-01A-12D-A27P-09	110	105	5	77	4.545455e-02	exome+100bp flanks	2	35791301	...	28	71	109	7.823130e-07	1.983722e-06	3.045433e-06	-5.516351e+00	...	5	32078719	...	1.558666e-07
TCGA-PE-A5DD-01A-12D-A27P-09	55	55	0	41	0	coding only	1	28835288	...	14	34	52	4.855162e-07	1.179111e-06	1.803346e-06	-5.743921e+00	...	4	28779097	...	1.389898e-07
TCGA-PE-A5DE-01A-11D-A27P-09	380	369	11	264	2.894737e-02	coding only	1	28835288	...	104	259	376	3.606692e-06	8.982050e-06	1.303958e-05	-4.884736e+00	...	0	28779097	...	0
